BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016940
(380 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/352 (92%), Positives = 335/352 (95%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT ERQDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTS 166
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
GV YSFGSNSSGQLGHGTTEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAG+VYAFG
Sbjct: 167 NGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGEVYAFG 226
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQGTK VT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND +
Sbjct: 227 KDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGK 286
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV PHPLLG LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 287 LGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 346
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQLLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 347 SRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 406
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV AL+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHN DGQ
Sbjct: 407 VPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQ 458
>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
Length = 537
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/345 (93%), Positives = 335/345 (97%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT ER+DLKQ+CGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KGVVYSFGSNSSGQLGHG TEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAGQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGNTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEP DVEPHPLLG LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 342
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQLLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 SRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VPKVV AL+++KA+HVATGDYTTFVVSE+GDVYSFGCGESASLGH
Sbjct: 403 VPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLGH 447
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L I+ + A G T +
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDYTTFV 427
Query: 110 ISDAGQVYAFG---KDSFGEAEYGV-----QGTKL-VTSPQLVESLK--NIFVVQAAIGN 158
+S+ G VY+FG S G QG V SP+LV SLK N VVQ ++ N
Sbjct: 428 VSEEGDVYSFGCGESASLGHNAAAAANADGQGRHANVLSPELVTSLKEVNERVVQISLTN 487
Query: 159 FF-----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG N E
Sbjct: 488 SIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVNNQTE 525
>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/352 (90%), Positives = 336/352 (95%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIF+PM ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT
Sbjct: 105 MCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 164
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 165 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 224
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 225 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 284
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 285 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 344
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEKHPRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 345 TRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 404
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN DGQ
Sbjct: 405 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQ 456
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 370 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 429
Query: 110 ISDAGQVYAFG------------KDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAI 156
+SD G VY+FG D G + +LVTS Q+ E + I + +
Sbjct: 430 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 489
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
N T L+ G++Y F G+ +LG N E
Sbjct: 490 WNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTE 524
>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera]
gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
Length = 534
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/352 (89%), Positives = 336/352 (95%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIF+PM ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT
Sbjct: 103 MCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 163 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 223 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 342
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEKHPRLIEQF++LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 TRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN DGQ
Sbjct: 403 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQ 454
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 427
Query: 110 ISDAGQVYAFG------------KDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAI 156
+SD G VY+FG D G + +LVTS Q+ E + I + +
Sbjct: 428 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
N T L+ G++Y F G+ +LG N E
Sbjct: 488 WNAHTFALTETGKLYAFGAGDKGQLGVELVANQTE 522
>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
[Vitis vinifera]
Length = 526
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/352 (89%), Positives = 336/352 (95%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIF+PM ER+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT
Sbjct: 95 MCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTV 154
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFG
Sbjct: 155 KGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFG 214
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+
Sbjct: 215 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 274
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 275 LGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 334
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEKHPRLIEQF++LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 335 TRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 394
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGES+SLGHN DGQ
Sbjct: 395 VPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQ 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 360 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 419
Query: 110 ISDAGQVYAFG------------KDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAI 156
+SD G VY+FG D G + +LVTS Q+ E + I + +
Sbjct: 420 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 479
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
N T L+ G++Y F G+ +LG N E
Sbjct: 480 WNAHTFALTETGKLYAFGAGDKGQLGVELVANQTE 514
>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 535
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/352 (88%), Positives = 337/352 (95%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT +RQDLK +CGGSWKL LR+L+AGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGEACCRREKSQAIAGPGHSIAVTS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KGVVYSFGSNSSGQLGHGTT+EEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYGVQG+K V +PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 KDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGHHT+ +DVEPHPLLG LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 342
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQF LLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 343 SRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 402
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL++VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHNA + +
Sbjct: 403 VPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDE 454
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFV 427
Query: 110 ISDAGQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNI--FVVQAAIGNF 159
+SD G VY+FG ++ G E G + V SP+LV SLK I VVQ ++ N
Sbjct: 428 VSDDGDVYSFGCGESASLGHNAAGNDEQGNRHAN-VLSPELVTSLKQINERVVQISLTNS 486
Query: 160 F-----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG N E
Sbjct: 487 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 523
>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 535
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/352 (87%), Positives = 333/352 (94%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIFKPMT ERQDLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 104 MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTS 163
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFG
Sbjct: 164 KGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFG 223
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYG QG+K V +P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 224 KDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 283
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGHHT+ ND+EPHPLLG LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 343
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEK PRLIEQFQ LNLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+
Sbjct: 344 TRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA 403
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
PKVV AL +VKA+HVATGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +
Sbjct: 404 APKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAE 455
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 369 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFV 428
Query: 110 ISDAGQVYAFG---KDSFG-EAEYGVQGTKL--VTSPQLVESLKNI--FVVQAAIGNFF- 160
+++ G VY+FG S G A +G + V +P+LV SLK I VVQ ++ N
Sbjct: 429 VAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIY 488
Query: 161 ----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG N E
Sbjct: 489 WNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 523
>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 432
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/352 (87%), Positives = 333/352 (94%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIFKPMT ERQDLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 1 MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTS 60
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFG
Sbjct: 61 KGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFG 120
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYG QG+K V +P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 121 KDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 180
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGHHT+ ND+EPHPLLG LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 240
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEK PRLIEQFQ LNLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+
Sbjct: 241 TRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA 300
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
PKVV AL +VKA+HVATGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +
Sbjct: 301 APKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAE 352
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 266 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFV 325
Query: 110 ISDAGQVYAFG---KDSFG-EAEYGVQGTKL--VTSPQLVESLKNI--FVVQAAIGNFF- 160
+++ G VY+FG S G A +G + V +P+LV SLK I VVQ ++ N
Sbjct: 326 VAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIY 385
Query: 161 ----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG N E
Sbjct: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 420
>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 530
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/352 (86%), Positives = 333/352 (94%), Gaps = 5/352 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT +RQDLK +CGGSWKLVLR+L+AGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 103 MCQKRAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAVTS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG+VYSFGSNSSGQLGHGTTEEEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFG
Sbjct: 163 KGIVYSFGSNSSGQLGHGTTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
EAEYGVQG+K V +PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 223 -----EAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDEK 277
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGHHT+ +DVEPHPLLG LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 278 LGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 337
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDE++PRLIEQF LLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 338 SRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES 397
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL++VKA+HVATGDYTTFVVS+DGDVYSFGCG+SASLGHNA + +
Sbjct: 398 VPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDE 449
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
QA G + ++ +G VY+F + +LGH T + P P+ TL+ I ++Q AAG
Sbjct: 149 QAIAGPGHSIAVTSKGIVYSFGSNSSGQLGHGTTEEEWRPRPIR-TLQGIRIIQAAAGAG 207
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ ++ SG VY+ G G GS+T P+++E + N+ V A G + A
Sbjct: 208 RTMLVS--DSGQ-VYAFGEAEYGV--QGSKTVAA-PQIVESLK--NIFVVQAAIGNFFTA 259
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVS---E 328
V+ ++GRV T+ WG LGH ++ + P ++ AL ++ + +A G ++
Sbjct: 260 VLSREGRVYTFSWGSDEKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCYLLCLACQPS 319
Query: 329 DGDVYSFGCGESASLGHNAIADGQVCSLL 357
VYS GCG LGH + D + L+
Sbjct: 320 GMSVYSVGCGLGGKLGHGSRTDEEYPRLI 348
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + +L ++ + A G T +
Sbjct: 363 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFV 422
Query: 110 ISDAGQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNI--FVVQAAIGN- 158
+SD G VY+FG ++ G E G + K V P+LV SLK I VVQ ++ N
Sbjct: 423 VSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAK-VLDPELVTSLKQINERVVQISLTNC 481
Query: 159 ----FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG N E
Sbjct: 482 NYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 518
>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 439
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/352 (84%), Positives = 329/352 (93%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT+ ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 9 MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 68
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 69 SGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 128
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGE EY QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 129 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 188
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 189 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 248
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 249 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 308
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV++L +V+A+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G
Sbjct: 309 VPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 360
>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
Length = 534
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/352 (84%), Positives = 329/352 (93%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT+ ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGE EY QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 224 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 283
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV++L +V+A+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G
Sbjct: 404 VPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 455
>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
Length = 534
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/352 (84%), Positives = 329/352 (93%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPMT+ ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 GGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGE EY QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYTFSWGND +
Sbjct: 224 KDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMK 283
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV++L +V+AIHVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G
Sbjct: 404 VPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 455
>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 534
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/348 (86%), Positives = 325/348 (93%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC+KRAIFKPMT + + +KQ+CGGSWKLVLRFL+AGE+CCRRE S AIAGPGHSIAVTS
Sbjct: 103 MCRKRAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFGSNSSGQLGHGTTEE+ PR IRSLQGIRIIQAAAG GRTMLISDAG VYAFG
Sbjct: 163 KGAVYSFGSNSSGQLGHGTTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYG QG ++VT+P+LVESLK+IFVVQAAIGNFFTAVLSREG VYTFSWG D+R
Sbjct: 223 KDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSR 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGHHTEPND+EP PL G LENIPVVQIAAGYCYLLALAC PSGM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHG 342
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNE+CES
Sbjct: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCES 402
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
PKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGHN +
Sbjct: 403 SPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVV 450
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G VY+F + +LGH T P L+ +L+ I ++Q AAG + ++
Sbjct: 160 VTSKGAVYSFGSNSSGQLGHGTTEEQSPPR-LIRSLQGIRIIQAAAGGGRTMLIS---DA 215
Query: 224 MAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
VY+ G G+ +G++ + P+L+E + ++ V A G + AV+ ++G V
Sbjct: 216 GHVYAFGKDSFGEAEYGAQGAQVVTTPKLVESLK--DIFVVQAAIGNFFTAVLSREGTVY 273
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVS---EDGDVYSFGC 337
T+ WG LGH E + P+ ++ AL ++ + +A G ++ VYS GC
Sbjct: 274 TFSWGTDSRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGC 333
Query: 338 GESASLGHNAIADGQVCSLLFLSIFQYLQI 367
G LGH + D + L + FQ L +
Sbjct: 334 GLGGKLGHGSRTDEKHPRL--IEQFQLLNL 361
>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 534
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/352 (84%), Positives = 325/352 (92%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KRAIFK MT ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAVT+
Sbjct: 104 MCHKRAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTT 163
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGSN+SGQLGH EEEWRPRPIRSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGE EYGVQG+++VT+PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +
Sbjct: 224 KDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMK 283
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 SRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECES 403
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL VKA+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G
Sbjct: 404 VPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGN 455
>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 534
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 287/352 (81%), Positives = 324/352 (92%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPM+ ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAV++
Sbjct: 104 MCQKRAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVST 163
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G Y+FGSN+SGQLGH + EEEWRPRP+RSLQGIRIIQAAAGAGRTML+SDAG+VYAFG
Sbjct: 164 SGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFG 223
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGE E+G QG++ V +PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +
Sbjct: 224 KDSFGEVEFGNQGSRAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMK 283
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 284 LGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHG 343
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+RTDEK+PRLIEQFQ LN+QP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES
Sbjct: 344 TRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECES 403
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+AL+ VKA++VATGDYTTF+VS GDVYSFGCGES+SLGHN +G
Sbjct: 404 VPKVVEALSSVKAVYVATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGN 455
>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 533
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/352 (84%), Positives = 323/352 (91%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHSIAVTS
Sbjct: 102 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSIAVTS 161
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VY+FG N+SGQLGHG TEE+ R +P+RSLQGIRIIQAAAGA RTMLISD G+VYA G
Sbjct: 162 KGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYACG 221
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K+SFGEAEYG QGT+ VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 222 KESFGEAEYGGQGTQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 281
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 282 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 341
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PR+IEQF++LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 342 SRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 401
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+ LN VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+ D Q
Sbjct: 402 VPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 453
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + L ++ + A G T +
Sbjct: 367 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLNHVKAVHVATGDYTTFV 426
Query: 110 ISDAGQVYAFG---KDSFGE-AEYGVQGTKL--VTSPQLVESLK--NIFVVQAAIGNFF- 160
+SD G VY+FG S G + QG + V SP +V SLK N VVQ ++ N
Sbjct: 427 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQISLTNSIY 486
Query: 161 ----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G++Y F G+ +LG + N E
Sbjct: 487 WNAHTFALTESGKLYAFGAGDQGQLGAELDRNRKE 521
>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 532
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/352 (83%), Positives = 323/352 (91%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 101 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 160
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VY+FG N+SGQLGHG TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA G
Sbjct: 161 KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 220
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 221 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 280
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 281 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 340
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PR+IEQFQ+LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 341 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 400
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+ D Q
Sbjct: 401 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 452
>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 432
Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/352 (83%), Positives = 323/352 (91%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 1 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 60
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VY+FG N+SGQLGHG TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA G
Sbjct: 61 KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 120
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 121 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 180
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TE DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 240
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PR+IEQFQ+LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 241 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+ D Q
Sbjct: 301 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 352
>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 534
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/346 (81%), Positives = 313/346 (90%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIF PMT +RQ LKQ+CGGSWKLVLRFLLAGEAC RRE SQ IAGPGHSIAVTS
Sbjct: 103 MCQKRAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACYRREKSQVIAGPGHSIAVTS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQVYAFG
Sbjct: 163 KGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K F E E G +G+K+VT+PQLVESLKNIFVVQAAIGN+FTAVLSREGRVYTFSWG+D +
Sbjct: 223 KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGK 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
L H T+PNDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCG+GGKLGHG
Sbjct: 283 LCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHG 342
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ TDEK+PRLIEQFQLLNLQP+V+AAG+WHAAVVGQDGRVCTWGWGR+GCLGHGNEEC
Sbjct: 343 TETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECAL 402
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
VPKVV+ L +VKA+HVA GDYTTFVVS+ GD YSFG GES +LGH+
Sbjct: 403 VPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHD 448
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGK 121
VYS G G+LGHGT +E PR I Q ++ + AAG+ ++ G+V +G
Sbjct: 328 VYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGW 387
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + LV P++VE LKN+ V A G++ T V+S G Y+F +G L
Sbjct: 388 GRHGCLGHGNEECALV--PKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTL 445
Query: 182 GH--------HTEPNDVEPHPLLGTLENIP-VVQIA-AGYCYLLA--LACQPSGMAVYSV 229
GH H + + P + +N V+QI+ Y +A A SG +Y+
Sbjct: 446 GHDPENPEQEHMHADVLTPKLVTSMKQNYERVIQISLTNSVYWIAHTFALTESG-KLYAF 504
Query: 230 GCGLGGKLGHGSR---TDEKHPRLIE 252
G G G+LG R T+ + P+ ++
Sbjct: 505 GAGDKGQLGVELRPYQTERRKPQRVD 530
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--G 210
Q G + ++ +G VY+F + +LGH T + +P P+ L+ I ++Q A G
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRA-LQGIRIIQATAATG 207
Query: 211 YCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
L++ + Q VY+ G ++G+ P+L+E L N+ V A G
Sbjct: 208 RTMLISDSGQ-----VYAFGKQYFCENEIGNEGSKMVTTPQLVES--LKNIFVVQAAIGN 260
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVS 327
+ AV+ ++GRV T+ WG G L H + + P+ ++ AL + + +A G ++
Sbjct: 261 YFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLA 320
Query: 328 ---EDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
VYS GCG LGH D + L + FQ L +
Sbjct: 321 CQPSGMSVYSVGCGMGGKLGHGTETDEKYPRL--IEQFQLLNL 361
>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
2 [Glycine max]
Length = 535
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/347 (81%), Positives = 314/347 (90%), Gaps = 2/347 (0%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVT 59
MCQKRAIFKPMT +RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVT
Sbjct: 102 MCQKRAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVT 161
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
SKGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQ Y F
Sbjct: 162 SKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVF 221
Query: 120 GKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
GK+SFGE E V +G+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG
Sbjct: 222 GKESFGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCV 281
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+L H T+ NDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLG
Sbjct: 282 GKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLG 341
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
HG++T+E++PRLIEQFQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEEC
Sbjct: 342 HGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEEC 401
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E VPKVV+ L +VKA+HVATGD+TTFVVS+ GDVYSFG GES SLGH
Sbjct: 402 ELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGH 448
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGK 121
VYS G G+LGHGT E PR I Q ++ + AAG+ ++ G+V +G
Sbjct: 329 VYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGW 388
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
S+G +G + +LV P++VE L+N+ V A G+F T V+S G VY+F +G L
Sbjct: 389 GSYGCLGHGNEECELV--PKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSL 446
Query: 182 GH---HTEPNDVEPHPLLGTLE------NIPVVQIA-AGYCYLLA--LACQPSGMAVYSV 229
GH + E D+ + L L N VVQI+ + Y A A SG +Y+
Sbjct: 447 GHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESG-KLYAF 505
Query: 230 GCGLGGKLG 238
G G G+LG
Sbjct: 506 GAGDKGQLG 514
>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
1 [Glycine max]
Length = 539
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/347 (81%), Positives = 314/347 (90%), Gaps = 2/347 (0%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVT 59
MCQKRAIFKPMT +RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVT
Sbjct: 106 MCQKRAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVT 165
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
SKGVVYSFGSNSSGQLGHGTTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQ Y F
Sbjct: 166 SKGVVYSFGSNSSGQLGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVF 225
Query: 120 GKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
GK+SFGE E V +G+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG
Sbjct: 226 GKESFGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCV 285
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+L H T+ NDVEP PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLG
Sbjct: 286 GKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLG 345
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
HG++T+E++PRLIEQFQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEEC
Sbjct: 346 HGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEEC 405
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E VPKVV+ L +VKA+HVATGD+TTFVVS+ GDVYSFG GES SLGH
Sbjct: 406 ELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGH 452
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGK 121
VYS G G+LGHGT E PR I Q ++ + AAG+ ++ G+V +G
Sbjct: 333 VYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGW 392
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
S+G +G + +LV P++VE L+N+ V A G+F T V+S G VY+F +G L
Sbjct: 393 GSYGCLGHGNEECELV--PKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSL 450
Query: 182 GH---HTEPNDVEPHPLLGTLE------NIPVVQIA-AGYCYLLA--LACQPSGMAVYSV 229
GH + E D+ + L L N VVQI+ + Y A A SG +Y+
Sbjct: 451 GHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESG-KLYAF 509
Query: 230 GCGLGGKLG 238
G G G+LG
Sbjct: 510 GAGDKGQLG 518
>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
Length = 508
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/345 (75%), Positives = 298/345 (86%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC++RAIF+PMT ER+ LK+ CGGSWKLVLRFL AGE C RRE QAIAGPGHSI VT
Sbjct: 76 MCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRREKIQAIAGPGHSIVVTK 135
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA AG GRTMLISD G+VYAFG
Sbjct: 136 TGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFG 195
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFG+ EYG G+K + +PQ+VESL IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+
Sbjct: 196 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 255
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEP D +P L G LEN PVVQIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG
Sbjct: 256 LGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHG 315
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE
Sbjct: 316 TRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCEL 375
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+PKVV++L VKA+HVATGDYTTFVV++ G+V+S GCGES+SLGH
Sbjct: 376 LPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGH 420
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
AVY+ G G+LGHGS +E PRL+ Q ++ + AG ++ GRV +G
Sbjct: 138 AVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQ--GVRIIQATAGVGRTMLISDTGRVYAFG 195
Query: 285 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+G +G +++ P++V++LN + + A G++ T V+S +G VY+F G A
Sbjct: 196 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 255
Query: 343 LGHNAIADGQVCSLL 357
LGH + Q LL
Sbjct: 256 LGHQTEPEDQKPQLL 270
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
+ G V ++G G LGHG + E P+ + SLQG++ + A G T +++DAG+V++
Sbjct: 350 SEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFS 409
Query: 119 FG---KDSFGEAEYGVQGTKL----VTSPQLVESLKN-------IFVVQAAIGNFFTAVL 164
G S G +G V P+LV SLK I + + N T L
Sbjct: 410 CGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFAL 469
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVE 191
GR++ F G+ +LG N+ E
Sbjct: 470 CDSGRLFAFGAGDKGQLGTELLDNESE 496
>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
Length = 539
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/345 (75%), Positives = 298/345 (86%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC++RAIF+PMT ER+ LK+ CGGSWKLVLRFL AGE C RRE QAIAGPGHSI VT
Sbjct: 107 MCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRREKIQAIAGPGHSIVVTK 166
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA AG GRTMLISD G+VYAFG
Sbjct: 167 TGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFG 226
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFG+ EYG G+K + +PQ+VESL IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+
Sbjct: 227 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 286
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH TEP D +P L G LEN PVVQIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG
Sbjct: 287 LGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHG 346
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE
Sbjct: 347 TRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCEL 406
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+PKVV++L VKA+HVATGDYTTFVV++ G+V+S GCGES+SLGH
Sbjct: 407 LPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGH 451
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
AVY+ G G+LGHGS +E PRL+ Q + + + AG ++ GRV +G
Sbjct: 169 AVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--IQATAGVGRTMLISDTGRVYAFG 226
Query: 285 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+G +G +++ P++V++LN + + A G++ T V+S +G VY+F G A
Sbjct: 227 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 286
Query: 343 LGHNAIADGQVCSLL 357
LGH + Q LL
Sbjct: 287 LGHQTEPEDQKPQLL 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
+ G V ++G G LGHG + E P+ + SLQG++ + A G T +++DAG+V++
Sbjct: 381 SEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFS 440
Query: 119 FG---KDSFGEAEYGVQGTKL----VTSPQLVESLKN-------IFVVQAAIGNFFTAVL 164
G S G +G V P+LV SLK I + + N T L
Sbjct: 441 CGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFAL 500
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVE 191
GR++ F G+ +LG N+ E
Sbjct: 501 CDSGRLFAFGAGDKGQLGTELLDNESE 527
>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/364 (67%), Positives = 289/364 (79%), Gaps = 4/364 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
+CQKRAIFK M E ERQ++K++CGGSWKLVL+FLLAGE CRRE SQA+AGPGHSIAVTS
Sbjct: 115 ICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKSQALAGPGHSIAVTS 174
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KGVVYSFG N SGQLG GTT++ W+P P+RSL GIRIIQAA RT +ISDAG+VYAFG
Sbjct: 175 KGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFVISDAGEVYAFG 234
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K F EA+ V TKL+T+PQ V+SL IFVVQAAIGN+FTA+LSREGRVYT SWGND R
Sbjct: 235 KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAILSREGRVYTLSWGNDER 294
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV---GCGLGGKL 237
LGH T+ + P PLLG LENIPVVQIAAG+CYLLALA QP+GM+VYSV G G
Sbjct: 295 LGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGMSVYSVGCGLGGKLGHG 354
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
S EK+PRLI++F LLN++PV+V+AG WHAAVVG+DGRVCTWGWGR+GCLGHG EE
Sbjct: 355 LSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEE 414
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
E+ PKVV L DVKA+HVATG YTTFVVS+DG VYSFG G A+LG + + + + L
Sbjct: 415 AENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFGSG-GANLGQDDVDENTLTPKL 473
Query: 358 FLSI 361
S+
Sbjct: 474 VSSL 477
>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
Length = 535
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/340 (63%), Positives = 270/340 (79%), Gaps = 5/340 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKR +FK M + +++ LKQ+CGGSWK VL+++L E + S+ IAGPGHSI ++S
Sbjct: 107 MCQKRTMFKLMKQEDQECLKQRCGGSWKHVLKYILVRE----KNGSRVIAGPGHSIVISS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VYSFG+N SGQLG G +E+ +RP IRSLQGIRI QAA G+ TML+SD G VYAFG
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFRPCIIRSLQGIRITQAAVGSRWTMLVSDTGSVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KD+F AE +T+P++VESLK +FVVQAAIG +F+AVLSREGRVYTFSWG + R
Sbjct: 223 KDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKEER 282
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH ++P+DVEP LL LE++PV I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 283 LGHSSDPSDVEPR-LLSGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHG 341
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+T++ P+LIEQFQ L+ +PV +AAG WHAA +G DGRVCTWGWG GCLGHG+EE ++
Sbjct: 342 CKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKA 401
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
VP +V+ L DVKA+H++TG+YTTFVV+E+GDVYSFG GES
Sbjct: 402 VPTLVEGLRDVKAVHLSTGEYTTFVVAENGDVYSFGSGES 441
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G+LG G D P +I Q + + A G+ +V G V +G
Sbjct: 166 VYSFGANCSGQLGLGDSEDRFRPCIIRSLQGIRI--TQAAVGSRWTMLVSDTGSVYAFGK 223
Query: 286 GRYGCLGHGNEECE------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ G E + + PK+V++L V + A G Y + V+S +G VY+F G+
Sbjct: 224 DNF----RGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGK 279
Query: 340 SASLGHNA 347
LGH++
Sbjct: 280 EERLGHSS 287
>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
gi|194702102|gb|ACF85135.1| unknown [Zea mays]
gi|194704788|gb|ACF86478.1| unknown [Zea mays]
gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
gi|219884475|gb|ACL52612.1| unknown [Zea mays]
gi|223949899|gb|ACN29033.1| unknown [Zea mays]
gi|224030775|gb|ACN34463.1| unknown [Zea mays]
gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 3 [Zea mays]
Length = 535
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/344 (62%), Positives = 267/344 (77%), Gaps = 7/344 (2%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKR +FK M + +++ LKQ+CGGSWK VL ++L E + S+ IAGPGHSI +TS
Sbjct: 107 MCQKRTMFKQMKQEDQECLKQRCGGSWKHVLGYILVRE----KNGSRVIAGPGHSIIITS 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VYSFG+N SGQLG G +E+ ++P IRSLQGIRI QAA G+ TML+SD G VY+FG
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRCTMLVSDTGSVYSFG 222
Query: 121 KDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
K+ F AE V G +T+P++ ESLK +FVVQAAIG +F+AVLSREGRVYTFSWG
Sbjct: 223 KEDFRVAEL-VDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKAE 281
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
RLGH ++P+DVEP LL LE++PV I+AG CYLL LA QP+GM+VYSVGCGLGGKLGH
Sbjct: 282 RLGHSSDPSDVEPR-LLPGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGH 340
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G +T+ P+L+EQFQ ++ +PV +AAG WHA +G DGRVCTWGWG GCLGHG+EEC
Sbjct: 341 GCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECR 400
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
+VP VV+ L DVKA+HV+TG+YTTFVV+E+GDVYSFG GES +
Sbjct: 401 AVPTVVEGLRDVKAVHVSTGEYTTFVVAENGDVYSFGSGESLAF 444
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G+LG G D P +I Q + + A G+ +V G V ++G
Sbjct: 166 VYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRI--TQAAVGSRCTMLVSDTGSVYSFGK 223
Query: 286 G--RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
R L G + P++ ++L V + A G Y + V+S +G VY+F G++ L
Sbjct: 224 EDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKAERL 283
Query: 344 GHNA 347
GH++
Sbjct: 284 GHSS 287
>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
Length = 634
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/344 (60%), Positives = 259/344 (75%), Gaps = 5/344 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR + K M + ER+ LKQ+CGGSWKLVL++++A E R S+ +AGPGHSI VT+
Sbjct: 204 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARE----RNYSRIVAGPGHSIVVTT 259
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG YSFG+N GQLG G TE+ ++P IRSLQGI+I QAA G+ +TML+SD G VYAFG
Sbjct: 260 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYAFG 319
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K SF E +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG R
Sbjct: 320 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 378
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH ++P+DVEP L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 379 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 438
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ ++ +LIE F L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE
Sbjct: 439 CKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 498
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG ES ++G
Sbjct: 499 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIG 542
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G+LG G D P LI Q + + V G+ +V G V +G G
Sbjct: 264 YSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAV--GSRQTMLVSDTGSVYAFGKG 321
Query: 287 RY--GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ L + + PK+V++L V + A G Y + +S +G VY+ G + LG
Sbjct: 322 SFVWEELSDAADHI-TTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLG 380
Query: 345 HNA 347
H++
Sbjct: 381 HSS 383
>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 537
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 258/344 (75%), Gaps = 5/344 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR + K M + ER+ LKQ+CGGSWKLV ++++A E R S+ +AGPGHSI VT+
Sbjct: 107 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTT 162
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG YSFG+N GQLG G TE+ ++P IRSLQ I+I QAA G+ +TML+SD G VYAFG
Sbjct: 163 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFG 222
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K SF E +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG R
Sbjct: 223 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 281
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH ++P+DVEP L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 282 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 341
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ ++ P+LIE F L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE
Sbjct: 342 CKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 401
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG ES ++G
Sbjct: 402 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIG 445
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G+LG G D P LI Q + + A G+ +V G V +G G
Sbjct: 167 YSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKI--TQAAVGSRQTMLVSDTGSVYAFGKG 224
Query: 287 RY--GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ L + + PK+V++L V + A G Y + +S +G VY+ G + LG
Sbjct: 225 SFVWEELSDAADHI-TTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLG 283
Query: 345 HNA 347
H++
Sbjct: 284 HSS 286
>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
Length = 609
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 258/344 (75%), Gaps = 5/344 (1%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR + K M + ER+ LKQ+CGGSWKLV ++++A E R S+ +AGPGHSI VT+
Sbjct: 179 MCHKRPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTT 234
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG YSFG+N GQLG G TE+ ++P IRSLQ I+I QAA G+ +TML+SD G VYAFG
Sbjct: 235 KGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFG 294
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K SF E +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG R
Sbjct: 295 KGSFVWEELS-DAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTER 353
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH ++P+DVEP L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG
Sbjct: 354 LGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHG 413
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ ++ P+LIE F L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE
Sbjct: 414 CKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRV 473
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+P VVQ L++VKA+HV+TG+YTTFVVS++GD YSFG ES ++G
Sbjct: 474 LPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIG 517
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G+LG G D P LI Q + + V G+ +V G V +G G
Sbjct: 239 YSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAV--GSRQTMLVSDTGSVYAFGKG 296
Query: 287 RYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ L + + PK+V++L V + A G Y + +S +G VY+ G + LG
Sbjct: 297 SFVWEELSDAADHI-TTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLG 355
Query: 345 HNA 347
H++
Sbjct: 356 HSS 358
>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/224 (90%), Positives = 210/224 (93%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQKRAIFKPM ERQDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 97 MCQKRAIFKPMAPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTS 156
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G VYSFGSNSSGQLGHGTTEEEWRPR IRSL+GIRIIQAAAG GRTMLISDAG+VYAFG
Sbjct: 157 NGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYAFG 216
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
KDSFGEAEYG QG+K+VT+PQLVESLKNIFVVQA IGNFFTAVLSREGRVYTFSWGND R
Sbjct: 217 KDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGNDGR 276
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+GH TEPNDVEPHPLLG LENIPVVQIAAGYCYLLALAC PSG+
Sbjct: 277 IGHQTEPNDVEPHPLLGALENIPVVQIAAGYCYLLALACHPSGI 320
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
S AVYS G G+LGHG+ +E PR I + + + + AAG ++ GRV
Sbjct: 156 SNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRI--IQAAAGPGRTMLISDAGRVY 213
Query: 282 TWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+G +G +G + + V P++V++L ++ + G++ T V+S +G VY+F G
Sbjct: 214 AFGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGN 273
Query: 340 SASLGH 345
+GH
Sbjct: 274 DGRIGH 279
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
QA G + ++ G VY+F + +LGH T + P + +L I ++Q AAG
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIR-SLRGIRIIQAAAGPG 201
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWH 270
+ ++ VY+ G G+ +G++ + P+L+E + N+ V G +
Sbjct: 202 RTMLIS---DAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLK--NIFVVQAVIGNFF 256
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATG 319
AV+ ++GRV T+ WG G +GH E + P ++ AL ++ + +A G
Sbjct: 257 TAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLGALENIPVVQIAAG 306
>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Brachypodium distachyon]
Length = 548
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/346 (61%), Positives = 266/346 (76%), Gaps = 2/346 (0%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MCQ+RA+FKPM E++ LKQ+CGGSWKLVLR++L GE RRE SQ IAGPGHSI VT+
Sbjct: 107 MCQERAMFKPMKPKEKEWLKQRCGGSWKLVLRYILVGEKNYRREKSQVIAGPGHSIVVTA 166
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
KG VYSFG N SGQLG G E +++P I SLQGIRI QAA G RTML+SD G VY FG
Sbjct: 167 KGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGIRITQAAVGLRRTMLVSDTGSVYTFG 226
Query: 121 KDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
D+FG +YG V SP+L+ESLK +FVVQA+IG +F+AVLSREGRVYTFSWG
Sbjct: 227 LDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAE 286
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
RLGH +E +DVEP L G L+++ V QIAAG CYLL L+ P+GM+VYS+GCGLGGKLGH
Sbjct: 287 RLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGH 346
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EEC 298
G++ E P+LI FQ N++P+ ++AGAWHAAV+ +DGRV TWGW GCLGHG+ E+C
Sbjct: 347 GNKDFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDC 406
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++P+ V+ LN+VKA+HV+ G++ TFVV+++GDVYSFG S +LG
Sbjct: 407 VTLPRAVEGLNNVKAVHVSAGEWCTFVVADNGDVYSFGFRGSHNLG 452
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G+LG G R ++ P LI Q + + A G +V G V T+G
Sbjct: 170 VYSFGVNCSGQLGLGDRENKFKPCLISSLQGIRI--TQAAVGLRRTMLVSDTGSVYTFGL 227
Query: 286 GRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+G L G N C + PK++++L V + + G Y + V+S +G VY+F G +
Sbjct: 228 DTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAER 287
Query: 343 LGHNA 347
LGH++
Sbjct: 288 LGHSS 292
>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
Length = 529
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/348 (58%), Positives = 255/348 (73%), Gaps = 5/348 (1%)
Query: 2 CQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK 61
C ++AIFK M + E+ LKQ+CGGSWKLVL +LL GE R S+ +AGPGH+IAVTSK
Sbjct: 95 CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGEKNYHRGKSRVVAGPGHTIAVTSK 154
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G VYSFG+NSSGQLG G TEE+ +P IRSLQGIRI QAA G+ RTML+SD G VY FG+
Sbjct: 155 GDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRRTMLVSDTGSVYVFGQ 214
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
D F E+ T +SP++VESLK IFVVQA++G F+AVLSREG+VYTF WG+DARL
Sbjct: 215 DIFAGLEFAGDYT---SSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWGHDARL 271
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GHH++P D+EP L ++ V+QIAAG CYLL L QP+GM+VYSVGCG GGKLGHG
Sbjct: 272 GHHSDPTDLEPRLLSVPPKDALVMQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGC 331
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-GRYGCLGHGN-EECE 299
PR+I+QF+ L ++PV V+AGA+H AV+ DGRV TWGW GCLGH + +E
Sbjct: 332 TISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYV 391
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+P V L VKA +++TG +TFVV+++GDVYSFGC S +LG A
Sbjct: 392 VLPTAVAGLGSVKATYISTGYCSTFVVTDNGDVYSFGCDHSRNLGVKA 439
>gi|388507174|gb|AFK41653.1| unknown [Lotus japonicus]
Length = 136
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/116 (87%), Positives = 113/116 (97%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTW
Sbjct: 1 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTW 60
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
GWGRYGCLGHGNE+CESVPKVV+AL +VKA++VATGDYTTFVVS+DGDVYSFGCG
Sbjct: 61 GWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCGN 116
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGK 121
VYS G G+LGHGT +E PR I Q + + + AAGA ++ G+V +G
Sbjct: 3 VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGW 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +G + + V P++VE+L N+ V A G++ T V+S +G VY+F GN
Sbjct: 63 GRYGCLGHGNEDCESV--PKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCGN 116
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG + E P+ + +L ++ + A G T +
Sbjct: 43 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFV 102
Query: 110 ISDAGQVYAFG 120
+SD G VY+FG
Sbjct: 103 VSDDGDVYSFG 113
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 140 PQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 196
P+L+E + N+ + A G + AV+ ++GRV T+ WG LGH E D E P ++
Sbjct: 25 PRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNE--DCESVPKVV 82
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
L N+ V +A G ++ VYS GCG
Sbjct: 83 EALTNVKAVYVATGDYTTFVVSDDGD---VYSFGCG 115
>gi|361069249|gb|AEW08936.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|376339101|gb|AFB34079.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339103|gb|AFB34080.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339105|gb|AFB34081.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339107|gb|AFB34082.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339109|gb|AFB34083.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339111|gb|AFB34084.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339113|gb|AFB34085.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339115|gb|AFB34086.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
Length = 96
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 92/96 (95%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
TDEK+PR+IEQF+LL L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1 TDEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
KVV++L VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61 KVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + SL ++ + G T +
Sbjct: 24 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLAVKAVHVTTGDYTTFV 83
Query: 110 ISDAGQVYAFG 120
+++ G VY+FG
Sbjct: 84 VAENGDVYSFG 94
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 82 EEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
+E PR I + +++ + AAGA ++ G+V +G +G +G + + T
Sbjct: 2 DEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE--TV 59
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
P++VESL + V G++ T V++ G VY+F G
Sbjct: 60 PKVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 140 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P+++E K + + V A G + AV+ ++GRV T+ WG LGH E + P ++
Sbjct: 6 PRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+L + V + G +A VYS GCG
Sbjct: 65 SLLAVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96
>gi|361069251|gb|AEW08937.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|376339117|gb|AFB34087.1| hypothetical protein CL2350Contig1_01, partial [Pinus mugo]
gi|383168843|gb|AFG67538.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168845|gb|AFG67539.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168847|gb|AFG67540.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168849|gb|AFG67541.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168851|gb|AFG67542.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168853|gb|AFG67543.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168855|gb|AFG67544.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168857|gb|AFG67545.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168859|gb|AFG67546.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168861|gb|AFG67547.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168863|gb|AFG67548.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168865|gb|AFG67549.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168867|gb|AFG67550.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168869|gb|AFG67551.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168871|gb|AFG67552.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168873|gb|AFG67553.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168875|gb|AFG67554.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
Length = 96
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 90/96 (93%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
TDEK+PR IEQF+ L L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1 TDEKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
KVV++L VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61 KVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ V G V ++G G LGHG E E P+ + SL ++ + G T +
Sbjct: 24 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLRVKAVHVTTGDYTTFV 83
Query: 110 ISDAGQVYAFG 120
+++ G VY+FG
Sbjct: 84 VAENGDVYSFG 94
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 80 TEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
T+E++ PR I + +++ + AAGA ++ G+V +G +G +G + +
Sbjct: 1 TDEKY-PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNE--ECE 57
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
T P++VESL + V G++ T V++ G VY+F G
Sbjct: 58 TVPKVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 140 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P+ +E K++ + V A G + AV+ ++GRV T+ WG LGH E + P ++
Sbjct: 6 PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+L + V + G +A VYS GCG
Sbjct: 65 SLLRVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 179/306 (58%), Gaps = 23/306 (7%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
QAIA G HS+A+T G VYSFG G+LGHG T+ + P+ I L I+ I AAG
Sbjct: 81 QAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDF 138
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ ++ +G VY+FG G + G T+ ++P+ +ESL ++ + AA GN A L+
Sbjct: 139 HSLALTKSGDVYSFGN---GTSGLGHGNTEDQSTPKKIESLSDVQAI-AAGGNHSLA-LT 193
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGM 224
+ G VY+F +G RLGH + +EP +E++ +Q IAAG + LAL SG
Sbjct: 194 KSGDVYSFGFGLFGRLGHGDTDSQLEPK----KIEDLSDIQAIAAGGNHSLALTK--SG- 246
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VYS G GL G+LGHG ++ P+ IE L ++Q VAAGA H+ + + G V ++G
Sbjct: 247 DVYSFGWGLHGQLGHGDTENQLTPKKIE--DLSDIQ--AVAAGANHSLALTKSGEVYSFG 302
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LGHG+ + + PK ++ L D++AI A GD+ + +++ GDVYSFG G S LG
Sbjct: 303 RGNTGQLGHGDTDDQLTPKKIEGLKDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-LG 359
Query: 345 HNAIAD 350
H A+
Sbjct: 360 HGDTAN 365
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 21/288 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+SFG G+LGHG T + P+ I L I+ I AAG ++ ++ +G VY+FG
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQAI--AAGTNHSLALTKSGDVYSFGFGL 106
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
FG +G ++L P+ +E L +I + A G+F + L++ G VY+F G + LGH
Sbjct: 107 FGRLGHGNTDSQL--EPKKIEGLSDIQAIAA--GDFHSLALTKSGDVYSFGNGT-SGLGH 161
Query: 184 HTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ P +E++ VQ IAAG + LAL SG VYS G GL G+LGHG
Sbjct: 162 GNTEDQSTPK----KIESLSDVQAIAAGGNHSLALTK--SG-DVYSFGFGLFGRLGHGDT 214
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+ P+ IE L ++Q +AAG H+ + + G V ++GWG +G LGHG+ E + P
Sbjct: 215 DSQLEPKKIE--DLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTP 270
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
K ++ L+D++A VA G + +++ G+VYSFG G + LGH D
Sbjct: 271 KKIEDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD 316
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query: 47 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
QAIA G HS+A+T G VYSFG GQLGHG TE + P+ I L I+ + AAGA
Sbjct: 230 QAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQAV--AAGAN 287
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ ++ +G+VY+FG+ + G+ +G +L +P+ +E LK+I + A G+F + L+
Sbjct: 288 HSLALTKSGEVYSFGRGNTGQLGHGDTDDQL--TPKKIEGLKDIQAIAA--GDFHSLALT 343
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ G VY+F G + LGH N +EP + G + + IAAG + LALA +
Sbjct: 344 KSGDVYSFGNGT-SGLGHGDTANQLEPKKIEGLTD---IQAIAAGANHSLALAVE 394
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
++V+S G G+ GKLGHG ++ P+ IE L ++Q +AAG H+ + + G V ++
Sbjct: 47 VSVFSFGMGMYGKLGHGDTANQLAPKKIE--GLSDIQ--AIAAGTNHSLALTKSGDVYSF 102
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G+G +G LGHGN + + PK ++ L+D++AI A GD+ + +++ GDVYSFG G S L
Sbjct: 103 GFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-L 159
Query: 344 GHNAIAD 350
GH D
Sbjct: 160 GHGNTED 166
>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 179/356 (50%), Gaps = 23/356 (6%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE---------ACCRRENSQAIAG 51
+C ++ M +++L +CGG+WK VLRFL A E AC N Q G
Sbjct: 64 LCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSAC----NMQVTTG 119
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
H++ + V YS GS+ G LGHG TT+ R IR ++Q +A
Sbjct: 120 RYHTLLIRDSSV-YSCGSSLCGVLGHGAETTQCVAFTR-IRFPSLANVVQVSASHNHAAF 177
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ +G+V+ G +S + + + P+LVE+LK + Q ++G FT L+R+G+
Sbjct: 178 VLQSGEVFTCGDNSSFCCGHK-DTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQ 236
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYS 228
+YT +LGH + P ++ LE I PVVQIAAG Y+LA+ VYS
Sbjct: 237 LYTCGSNTHGQLGHGDTLDRPTP-KIIELLEGIGPVVQIAAGPSYVLAVT---DNGVVYS 292
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G LGHG + DE PR I+ F+ ++ V V+AG HA + G V +WG G
Sbjct: 293 FGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC 352
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+E +++P +V L A+ TFV+ +DG VY FGC SLG
Sbjct: 353 GALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLG 408
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
RR++ + AG H++A+ S G VYS+G G LGHG ++ P + L+ +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAV 378
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
QA A +T ++ D G VY FG FG + + T+ V +P++++SL+ V Q + G
Sbjct: 379 QACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTG 438
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ T V++ +G+++ F +LGH T ++P +
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIF 477
>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 485
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 173/350 (49%), Gaps = 11/350 (3%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHS 55
+C+ R F M A R +L +CGGSWK VLRFL + E N Q G H+
Sbjct: 55 LCEARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGRYHT 114
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
+ V V YS GS+ G LGHG + S + R++ +A +++ G
Sbjct: 115 LLVHDSSV-YSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETG 173
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QV+ G +S +G G + + P +E+LK F Q A G FT +L+REG+VYT
Sbjct: 174 QVFTCGDNSSLCCGHGDVG-RTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCG 232
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P + + PVVQ+AAG Y A+ + V+S G
Sbjct: 233 SNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGT---VHSFGSCTN 289
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
LGHG + +E PR I+ F+ N+ V V+AG HA + G V TWG G G LGHG
Sbjct: 290 FCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHG 349
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+E ++ P+++ +L A+ V TFV++++G V +FG SLG
Sbjct: 350 DENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLG 399
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+G +
Sbjct: 310 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAV 369
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T +++D G V AFG FG + + + V P +++SL+ +V Q + G
Sbjct: 370 QVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTG 429
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ T ++ +G V+ F A+LG ++P ++ ++ + IAA
Sbjct: 430 LYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSMEDIAIAA 481
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+Q+A G + L + +VYS G L G LGHG T + F L+ + V +
Sbjct: 105 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALS-RVVNI 159
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTT 323
+A HAA V + G+V T G C GHG+ P ++AL VATG T
Sbjct: 160 SAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFT 219
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
+++ +G VY+ G LGH D
Sbjct: 220 VILTREGQVYTCGSNTHGQLGHGDTID 246
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYT 322
VA G ++ ++G+V T G +G LGHG+ + PK+++ + VA G
Sbjct: 212 VATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASY 271
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
TF V++DG V+SFG + LGH
Sbjct: 272 TFAVTDDGTVHSFGSCTNFCLGH 294
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 173/358 (48%), Gaps = 30/358 (8%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
+C F M +++L +CGG+WK VLRFL + E + N Q G H+
Sbjct: 64 LCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGKYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ + S VYS GS G LG G+ T + P P R++ +A
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLP-------RVVHVSASFNHA 175
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+
Sbjct: 176 AFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQ 234
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
G VYT +LGH D + P +E + VVQIAAG Y+L++ V
Sbjct: 235 GHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTV 287
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKG 347
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+E ++ P+++ +L + A+ V TFV+ G VY FG SLG
Sbjct: 348 YCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLG 405
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG E+ P + SL+ +Q A +T +
Sbjct: 327 AGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFV 386
Query: 110 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ ++G VY FG FG + + + V P+++++L+ V Q + G + T V++ G
Sbjct: 387 LVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRG 446
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
+++ F A+LGH T + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 261
+QI G + L + S +VYS G GL G LG GS T + F ++ P
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDSPPLPR 164
Query: 262 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 319
V V+A HAA V Q G V T G C GH + P++V++L + VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T ++ G VY+ G LGH D
Sbjct: 225 LNFTVFLTRQGHVYTCGTNTHGQLGHGDTQD 255
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
SQ G H++ +TS+G ++ FG N QLGH T P I
Sbjct: 430 SQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473
>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 491
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 174/350 (49%), Gaps = 11/350 (3%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR-----RENSQAIAGPGHS 55
+C + + M E ++ L +C G WK V RFL E N Q G H+
Sbjct: 64 LCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGRYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+ + S G VYS GS+ G LGHG+ T + I I + Q +A ++ +G
Sbjct: 124 LLI-SNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQSG 182
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QV+ G +S + ++ P+LVE+L I Q ++G+ F+ L+R+G VYT
Sbjct: 183 QVFTCGDNSSFCCGHRDTSCRIF-RPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCG 241
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH P + +E V+QIAAG Y+LA+ + VYS G G
Sbjct: 242 TNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVV---NDGRVYSFGSGSN 298
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
LGHG + +E PR+++ F+L N+ V V+AG HA + +G V TWG G G LGHG
Sbjct: 299 FCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHG 358
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+E +++P+ + +L + A+ V TFV+ + G VY FG SLG
Sbjct: 359 DEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLG 408
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G+VY++G G LGHG ++ P+P+ SL+ +Q A +T +
Sbjct: 330 AGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFV 389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ D G VY FG FG + +G + V P+ ++SL+ V Q + G + T V++ +G
Sbjct: 390 LVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKG 449
Query: 169 RVYTFSWGNDARLGHHT-----EPNDVEPHPL 195
+++ F A+LGH + EP ++ H L
Sbjct: 450 KIFGFGDNERAQLGHESLRGCLEPTEIFIHDL 481
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
+QIA G + L + S +VYS G L G LGHGS T + F +N P +
Sbjct: 114 MQIATGRYHTLLI----SNGSVYSCGSSLCGVLGHGSETTQ-----CVTFTRINFPPSIY 164
Query: 264 ---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 319
V+A HAA V Q G+V T G C GH + C P++V+ALN + V+ G
Sbjct: 165 VEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG 224
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
+ ++ G VY+ G LGH +G
Sbjct: 225 HNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEG 256
>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 173/358 (48%), Gaps = 30/358 (8%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
+C + M +++L +CGG+WK VLRFL + E + N Q G H+
Sbjct: 64 LCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ + S VYS GS G LG G+ T ++ P R++ +A
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLA-------RVVHVSASFNHA 175
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+
Sbjct: 176 AFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRK 234
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
G VYT +LGH D + P +E + VVQIAAG Y+L++ V
Sbjct: 235 GHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTV 287
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKG 347
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+E ++ P+++ +L + + V TFV+ + G VY FG SLG
Sbjct: 348 YCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLG 405
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG E+ P + SL+ ++Q A +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386
Query: 110 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ D+G VY FG FG + + + V P+++++L+ V Q + G + T V++ G
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRG 446
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
+++ F A+LGH + +EP
Sbjct: 447 QIFGFGDNERAQLGHDILRSCLEP 470
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 261
+QI G + L + S +VYS G GL G LG GS T + F ++ P
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDFPPLAR 164
Query: 262 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 319
V V+A HAA V Q G V T G C GH + P++V++L + VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAG 224
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T ++ G VY+ G LGH D
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQD 255
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 173/358 (48%), Gaps = 30/358 (8%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
+C + M +++L +CGG+WK VLRFL + E + N Q G H+
Sbjct: 64 LCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ + S VYS GS G LG G+ T ++ P R++ +A
Sbjct: 124 LLI-SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLA-------RVVHVSASFNHA 175
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+
Sbjct: 176 AFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRK 234
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
G VYT +LGH D + P +E + VVQIAAG Y+L++ V
Sbjct: 235 GHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTV 287
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKG 347
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+E ++ P+++ +L + + V TFV+ + G VY FG SLG
Sbjct: 348 YCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLG 405
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG E+ P + SL+ ++Q A +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386
Query: 110 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ D+G VY FG FG + + + V P+++++L+ V Q + G + T V++ G
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRG 446
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
+++ F A+LGH T + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 261
+QI G + L + S +VYS G GL G LG GS T + F ++ P
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDFPPLAR 164
Query: 262 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 319
V V+A HAA V Q G V T G C GH + P++V++L + VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T ++ G VY+ G LGH D
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQD 255
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
SQ G H++ +TS+G ++ FG N QLGH T P I
Sbjct: 430 SQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473
>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 497
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 178/352 (50%), Gaps = 15/352 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHS 55
+C +++ M +++L +CGG+WK VLRFLLA E N Q G H+
Sbjct: 64 LCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAG 114
+ + S VYS GS+ G LGHG + + + R++Q +A I ++G
Sbjct: 124 LLI-SNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILESG 182
Query: 115 QVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
+V+ G +S G Q T + + P+ VE+LK + Q A G FT L+R G VY+
Sbjct: 183 EVFTCGDNS--SFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSC 240
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LGH + P ++ + E I V QIAAG Y+LA+ SG+ VYS G G
Sbjct: 241 GTNTHGQLGHGDTLDRPTP-KIIESFEGIGSVAQIAAGPSYVLAVT--DSGV-VYSFGSG 296
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
LGHG + +E HPR I+ F+ NL V V+AG H + G V TWG G G LG
Sbjct: 297 SNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALG 356
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
HG+E +++P+ + +L A+ V TFV+ + G V+ FG SLG
Sbjct: 357 HGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLG 408
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
RR+N + AG H +A+ S G VY++G G LGHG ++ P P+ SL+ +
Sbjct: 319 RRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAV 378
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T ++ D G V+ FG FG + +G + V P++++SL+ V Q + G
Sbjct: 379 QVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTG 438
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
+ T ++ +G+V+ F A+LGH T +EP
Sbjct: 439 LYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEP 473
>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 173/341 (50%), Gaps = 23/341 (6%)
Query: 16 RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
R +L ++CGGSWK VLRFL + G N Q G H++ V V YS GS+
Sbjct: 71 RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129
Query: 71 SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--- 124
G LGHG TT+ R P SL R++ +A +++ G+V+ G +S
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G E G + + P +++LK I Q A G FT +L+ +G+VYT +LGH
Sbjct: 188 GHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG 243
Query: 185 TEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ P ++ E + PVVQ+AAG Y A+ + VYS G LGHG +
Sbjct: 244 DTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVTDDGT---VYSFGSCTNFCLGHGDQH 299
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
DE PR I+ F+ N+ V V+AG HA + G V TWG G G LGHG+E ++ P+
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPE 359
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ +L A+ V TFV++++G V++FG SLG
Sbjct: 360 LISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLG 400
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+ +
Sbjct: 311 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAV 370
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T +++D G V+AFG FG + +G + V P++++SL++ +V Q + G
Sbjct: 371 QVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTG 430
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ T ++ G V+ F A+LG ++P ++
Sbjct: 431 LYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIM 469
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
+Q+A G + L + +VYS G L G LGHG D + +L VV
Sbjct: 106 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVPFPSLSRVVN 159
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 321
++A HAA V + G V T G C GHG E ++ P ++AL + VATG
Sbjct: 160 ISASHNHAAFVTELGEVFTCGDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLS 218
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T +++ DG VY+ G LGH D
Sbjct: 219 FTVILTTDGQVYTCGSNTHGQLGHGDTID 247
>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 173/341 (50%), Gaps = 23/341 (6%)
Query: 16 RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
R +L ++CGGSWK VLRFL + G N Q G H++ V V YS GS+
Sbjct: 71 RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129
Query: 71 SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--- 124
G LGHG TT+ R P SL R++ +A +++ G+V+ G +S
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G E G + + P +++LK I Q A G FT +L+ +G+VYT +LGH
Sbjct: 188 GHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG 243
Query: 185 TEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ P ++ E + PVVQ+AAG Y A+ + VYS G LGHG +
Sbjct: 244 DTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVTDDGT---VYSFGSCTNFCLGHGDQH 299
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
DE PR I+ F+ N+ V V+AG HA + G V TWG G G LGHG+E ++ P+
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPE 359
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ +L A+ V TFV++++G V++FG SLG
Sbjct: 360 LISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLG 400
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+ +
Sbjct: 311 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAV 370
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T +++D G V+AFG FG + +G + V P++++SL++ +V Q + G
Sbjct: 371 QVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTG 430
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ T ++ G V+ F A+LG ++P ++
Sbjct: 431 LYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIM 469
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
+Q+A G + L + +VYS G L G LGHG D + +L VV
Sbjct: 106 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVPFPSLSRVVN 159
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 321
++A HAA V + G V T G C GHG E ++ P ++AL + VATG
Sbjct: 160 ISASHNHAAFVTELGEVFTCGDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLS 218
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T +++ DG VY+ G LGH D
Sbjct: 219 FTVILTTDGQVYTCGSNTHGQLGHGDTID 247
>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 172/341 (50%), Gaps = 23/341 (6%)
Query: 16 RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
R +L ++CGGSWK VLRFL + G N Q G H++ V V YS GS+
Sbjct: 71 RGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLLVHDSSV-YSCGSS 129
Query: 71 SSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--- 124
G LGHG TT+ R P SL R++ +A +++ G+V+ G +S
Sbjct: 130 LCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAFVTELGEVFTCGDNSSLCC 187
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G E G + + P +++LK I Q A G FT +L+ +G+VYT +LGH
Sbjct: 188 GHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG 243
Query: 185 TEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ P ++ E + PVVQ+AAG Y A+ VYS G LGHG +
Sbjct: 244 DTIDRATPK-IVELFEGLAPVVQVAAGASYTFAVT---DDGTVYSFGSCTNFCLGHGDQH 299
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
DE PR I+ F+ N+ V V+AG HA + G V TWG G G LGHG+E ++ P+
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPE 359
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ +L A+ V TFV++++G V++FG SLG
Sbjct: 360 LISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLG 400
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+ +
Sbjct: 311 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAV 370
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T +++D G V+AFG FG + +G + V P++++SL++ +V Q + G
Sbjct: 371 QVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTG 430
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH 183
+ T ++ G V+ F A+LG
Sbjct: 431 LYHTVAVTNRGIVFGFGDNERAQLGQ 456
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+Q+A G + L + +VYS G L G LGHG T + F L+ + V +
Sbjct: 106 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS-RVVNI 160
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYT 322
+A HAA V + G V T G C GHG E ++ P ++AL + VATG
Sbjct: 161 SASHNHAAFVTELGEVFTCGDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLSF 219
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
T +++ DG VY+ G LGH D
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTID 247
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++AVT++G+V+ FG N QLG +P I + + I AA +G
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484
Query: 106 R 106
R
Sbjct: 485 R 485
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 180/333 (54%), Gaps = 21/333 (6%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSL 92
EA R AG HS+ T G + SFG S+ G+LGHG + PRP+ SL
Sbjct: 104 EALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL 163
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
G+RI++ AAGA ++++SD G V++FG G +G Q +LV P+L+ SL+ VV
Sbjct: 164 SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV--PKLISSLQREKVV 221
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A G+ + V++ G VY+F G++ LGH + P + ++ P V++AAG
Sbjct: 222 DIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGS 280
Query: 213 YLLALA----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ--PVVVAA 266
+ L L+ + G V S G G+LG G + R+I + ++ V + A
Sbjct: 281 HSLVLSKLYVLEQEGR-VLSFGQNSYGQLGLGHFS-----RMIASPAQVQVEAAAVEIEA 334
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFV 325
GA H+ V+ DGRV ++G ++G LGHGN+ ++ P ++Q+L + + VA G+ + V
Sbjct: 335 GAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLV 394
Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
+S +G V+SFGCG++ LG ++ +++F
Sbjct: 395 LSAEGTVFSFGCGKNGRLGKGDESNATQPTVVF 427
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 25/309 (8%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G V SFG GHG ++ RP+ + +L R+ +AG +++ + G + +FG
Sbjct: 78 GNVVSFGLADPS--GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGY 135
Query: 122 DSF-----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
S G +G Q T+++ P L SL + +V+ A G + VLS +G V++F G
Sbjct: 136 GSANVVVDGRLGHGDQRTQMIPRPVL--SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVG 193
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
D LGH + + P L+ +L+ VV IAAG + L +A SG VYS G G G
Sbjct: 194 IDGSLGHGDQARQLVP-KLISSLQREKVVDIAAGSAHSLVVA--ESG-DVYSFGLGSEGA 249
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG------QDGRVCTWGWGRYGC 290
LGHG P+ IE F + V VAAG H+ V+ Q+GRV ++G YG
Sbjct: 250 LGHGDTDMSLVPKKIEHF--VQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQ 307
Query: 291 LGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-NAI 348
LG G+ + P VQ + A+ + G + + V++ DG VYSFG + LGH N +
Sbjct: 308 LGLGHFSRMIASPAQVQV--EAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDL 365
Query: 349 ADGQVCSLL 357
D +L+
Sbjct: 366 RDNPEPTLI 374
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 136/272 (50%), Gaps = 30/272 (11%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ ++ +G V+SFG G LGHG + P+ I SLQ +++ AAG+ +++
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLV 232
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR--- 166
++++G VY+FG S G +G LV P+ +E V+ A G + VLS+
Sbjct: 233 VAESGDVYSFGLGSEGALGHGDTDMSLV--PKKIEHFVQRPAVKVAAGGSHSLVLSKLYV 290
Query: 167 ---EGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLA 216
EGRV +F S+G LGH + ++ + + V V+I AG + L
Sbjct: 291 LEQEGRVLSFGQNSYGQ-LGLGHFSR--------MIASPAQVQVEAAAVEIEAGAHHSLV 341
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L VYS G G+LGHG+ D P LI+ + + V VAAG + V+
Sbjct: 342 LTNDGR---VYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERI--VDVAAGNNFSLVLS 396
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+G V ++G G+ G LG G+E + P VV A
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428
>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
Length = 488
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 172/353 (48%), Gaps = 17/353 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
+C ++ M +++L C G+WK + FL + E E SQ IA +
Sbjct: 64 LCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHT 123
Query: 57 AVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+ + VYS G + SG L HG+ T + PI ++ Q +A + + +GQ
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQ 183
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V G +S + + ++ + P+LVE+LK Q A G FT LSREG YT
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+LGH D P+ +E + PVVQIAAG Y+LAL S VYS G
Sbjct: 243 NTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGS---VYSFGS 295
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G LGHG + DE PR+I+ F+ + + V+AG HA + +GRV TWG G G L
Sbjct: 296 GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGAL 355
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+E + P+V+ LN+ A+ V TFV+ E G +Y FG SLG
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG ++ P+ + +L +Q A +T +
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFV 389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ + G +Y FG FG + +G + V P+++E LK V Q + G + T V+++ G
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRG 449
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
R++ F A+LGH + +EP
Sbjct: 450 RIFGFGDNERAQLGHDSLRGCLEP 473
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+L+E + + V AAG + ++G T G +G LGHG+ VPKVV+
Sbjct: 207 PKLVEALKGTPCKQV--AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264
Query: 308 LNDV-KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
L + + +A G +++DG VYSFG G + LGH D
Sbjct: 265 LKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQD 308
>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 172/353 (48%), Gaps = 17/353 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
+C ++ M +++L C G+WK + FL + E E SQ IA +
Sbjct: 64 LCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHT 123
Query: 57 AVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+ + VYS G + SG L HG+ T + PI ++ Q +A + + +GQ
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQ 183
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V G +S + + ++ + P+LVE+LK Q A G FT LSREG YT
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+LGH D P+ +E + PVVQIAAG Y+LA+ S VYS G
Sbjct: 243 NTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGS---VYSFGS 295
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G LGHG + DE PR+I+ F+ + + V+AG HA + +GRV TWG G G L
Sbjct: 296 GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGAL 355
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+E + P+V+ LN+ A+ V TFV+ E G +Y FG SLG
Sbjct: 356 GHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG ++ P+ + +L +Q A +T +
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFV 389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ + G +Y FG FG + +G + V P+++E LK V Q + G + T V+++ G
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRG 449
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
R++ F A+LGH + +EP
Sbjct: 450 RIFGFGDNERAQLGHDSLRGCLEP 473
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+L+E + + V AAG + ++G T G +G LGHG+ VPKVV+
Sbjct: 207 PKLVEALKGTPCKQV--AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264
Query: 308 LNDV-KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
L + + +A G V++DG VYSFG G + LGH D
Sbjct: 265 LKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQD 308
>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 173/352 (49%), Gaps = 15/352 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHS 55
+C ++ M ++ L +C G+WK VLRFL A G N Q G H+
Sbjct: 64 LCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+ + V YS GS+ G LGHG TT+ R IR +IQ +A + +
Sbjct: 124 LLIRDSSV-YSCGSSLCGVLGHGAETTQCVAFTR-IRFPSLAYVIQVSASHNHAAFVLQS 181
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+V+ G +S + + + P+LVE+LK + Q A+G FT L+R+G++YT
Sbjct: 182 GEVFTCGDNSSFCCGHN-DTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTC 240
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LGH + P ++ LE + VVQIAAG Y+LA+ VYS G G
Sbjct: 241 GTNTHGQLGHGDTQDRPTP-KIIELLEGVGSVVQIAAGPSYVLAVT---DNGVVYSFGSG 296
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
LGHG + DE PR I+ F+ ++ V V+AG HA + G V +WG G G LG
Sbjct: 297 SNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALG 356
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
HG+E +++P +V L A+ V TFV+ + G VY FG SLG
Sbjct: 357 HGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLG 408
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
RR++ + AG H++A+ S G VYS+G G LGHG ++ P + L+ +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAV 378
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T ++ D G VY FG FG + +G + V P++++SL+ V Q + G
Sbjct: 379 QVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTG 438
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
+ T V++ +G+++ F A+LGH T ++P
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQP 473
>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 488
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSI 56
+C ++ M +++L C G+WK +L FL + E E SQ IA +
Sbjct: 64 LCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGKYHT 123
Query: 57 AVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+ + VYS G + SG L HG T + PI ++ Q +A + + +G+
Sbjct: 124 LLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGE 183
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V G +S + + ++ + P+LVE LK Q A G FT LSREG YT
Sbjct: 184 VLTCGDNSSHCCGH-LDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGS 242
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P ++ L+NI PVVQIAAG Y+LA+ S VYS G G
Sbjct: 243 NTHGQLGHGDTMDRPAP-KVVEFLKNIGPVVQIAAGPSYVLAVTQDGS---VYSFGSGSN 298
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
LGHG + DE PR+I+ F+ + + V+AG HA + +GRV TWG G G LGHG
Sbjct: 299 FCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHG 358
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+E + P+V+ L + A+ V TFV+ E G +Y FG SLG
Sbjct: 359 DENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G VY++G G LGHG ++ P+ + +L+ +Q A +T +
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFV 389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ + G +Y FG FG + +G + V P+++E LK V Q + G + T V+++ G
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQGG 449
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
R++ F A+LGH++ +EP
Sbjct: 450 RIFGFGDNERAQLGHNSLRGCLEP 473
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 248 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+L+E +L P VAAG + ++G T G +G LGHG+ PKVV+
Sbjct: 207 PKLVE---VLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVE 263
Query: 307 ALNDV-KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
L ++ + +A G V++DG VYSFG G + LGH D
Sbjct: 264 FLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQD 308
>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|223950263|gb|ACN29215.1| unknown [Zea mays]
gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 483
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 167/339 (49%), Gaps = 19/339 (5%)
Query: 16 RQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
R +L ++CGGSWK VLRFL + G + Q G H++ V V YS GS+
Sbjct: 70 RGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGRYHTLLVHDSSV-YSCGSS 128
Query: 71 SSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSF---GE 126
G LGHG + S + R+I +A ++++G+V+ G +S G
Sbjct: 129 LCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEVFTCGDNSSLCCGH 188
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
E G + + P VE+LK I Q A G FT +L+R+G+VYT +LGH
Sbjct: 189 GEVG----RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDT 244
Query: 187 PNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
+ P L+ E VVQIAAG Y A+ V+S G LGHG + DE
Sbjct: 245 IDRATP-KLIELFEGPTQVVQIAAGASYTFAVT---DDGTVHSFGSCTNFCLGHGDQHDE 300
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
PR I+ F+ N+ V V+AG HA + G V TWG G G LGHG+E ++ P+++
Sbjct: 301 LLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELI 360
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+L A+ V TFV++++G V +FG SLG
Sbjct: 361 GSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLG 399
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+G +
Sbjct: 310 KRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAV 369
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIG 157
Q A +T +++D G V AFG FG + +GT V P+++ESL++ +V Q + G
Sbjct: 370 QVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTG 429
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPV 204
+ T ++ +G V+ F A+LG ++P ++ ++E+IP+
Sbjct: 430 LYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIEDIPI 478
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
+Q+A G + L + +VYS G L G LGHG D + +L V+
Sbjct: 105 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVSFPSLSRVIN 158
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 321
++A HAA V + G V T G C GHG E ++ P V+AL + VATG
Sbjct: 159 ISASHNHAAFVTESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIPCKQVATGLS 217
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL--LFLSIFQYLQI 367
T +++ DG VY+ G LGH D L LF Q +QI
Sbjct: 218 FTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQI 265
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++AVT+KG+V+ FG N QLG +P I + I I AA +G
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIEDIPIAAPSG 483
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 156/283 (55%), Gaps = 9/283 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VYS+G GQLG G T ++ RP PI +L RI+Q A G+G T++++D G+VY +G+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G +G G K V P+LVE L+ + Q G++ TA ++ G +YT+ G +LGH
Sbjct: 63 DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
E P L+ TL+ + V Q+A G + + L VY+ G G GHG
Sbjct: 121 GNETGHSTPF-LVETLKGMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDTE 176
Query: 244 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P +E+ + N+ V ++A +H A + + G V T+G G++G LGH +E + V
Sbjct: 177 GHQYLPCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V+AL + VA G + T V+E G+VY++G GE LGH
Sbjct: 235 RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH 277
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 161/310 (51%), Gaps = 9/310 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+A R Q G GH++ +T +G VY++G G+LGHG ++ PR + L+G I
Sbjct: 29 DALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
Q G+ T ++ +G +Y +G +G+ +G + ++P LVE+LK + V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPFLVETLKGMQVRQVACG 146
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ T VL VYT+ + GH TE + P P+ L +VQI+A C
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKNIVQISA--CGFHT 203
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A G V++ G G G+LGH S ++ R +E ++ V A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQV--ACGGFHTAAVTE 260
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG G +G LGHG++ ++VP V++L + + + G T +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320
Query: 337 CGESASLGHN 346
G+ LGHN
Sbjct: 321 NGDHGKLGHN 330
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
WK V R + E + Q G H+ AVT G +Y++G G+LGHG P
Sbjct: 73 WKFVPRLV---EELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTP 129
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVES 145
+ +L+G+++ Q A G+ T+++ + VY +G G + +G +G + + P VE
Sbjct: 130 FLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCP--VEE 187
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ +VQ + F TA LS G V+TF G RLGH++E N P+ +E +
Sbjct: 188 LRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN----QPVARFVEALAGK 243
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
++ C A VY+ G G G+LGHG + ++ P +E L+ V +
Sbjct: 244 RVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVES--LVEKLVVQIT 301
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
G H + G V TWG G +G LGH + ++PK+V L + I VA+
Sbjct: 302 CGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVAS 354
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VY++G+ G+ G+ T P +++L +VQ A G+ T VL+ EG VYT+
Sbjct: 3 VYSWGRGEDGQ--LGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G+D RLGH P L+ L + Q+ G + A+ +Y+ G G+ G
Sbjct: 61 GDDGRLGHGDNGWKFVPR-LVEELRGKNIRQVTCGSYHTAAVTVSGD---LYTWGGGMYG 116
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
KLGHG+ T P L+E + +Q VA G+ H V+ ++ V TWG G GHG+
Sbjct: 117 KLGHGNETGHSTPFLVETLK--GMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD 174
Query: 296 EE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
E + +P V+ L + ++ + T +SE G+V++FG G+ LGHN+
Sbjct: 175 TEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNS 227
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M VYS G G G+LG G +D+ P I+ L + V +A G+ H V+ +G V TW
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTDEGEVYTW 58
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G G LGHG+ + VP++V+ L V G Y T V+ GD+Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 344 GH 345
GH
Sbjct: 119 GH 120
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ + Q G H++A+T G VY++G+ G+LGH T + P+ + L+G R+
Sbjct: 290 ESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRV 349
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
I A+ T+ + D A + S + Y +L+ S + + F+++
Sbjct: 350 ISVASYNEHTVALVDP---VAMLRASMLTSSYVGDMRQLIDSAEFSDV---TFLIEGRAV 403
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ A+L+ + + + R H E PL+ T +PV Y Y+
Sbjct: 404 HSHRAILAARSDHFRAMFSSGMRESHEQEI------PLMHT--RVPVFLALLEYIYV 452
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 164/310 (52%), Gaps = 13/310 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VYS+G GQLG G T ++ RP PI +L RI+Q A G+G T+++++ G+VY +G+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G +G G K V P+LVE L+ + Q G++ TA ++ G +YT+ G +LGH
Sbjct: 63 DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
E P+ L+ TL+++ V Q+A G + + L VY+ G G GHG
Sbjct: 121 GNETGHSTPY-LVETLKSMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDT- 175
Query: 244 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
E H L + L + +V ++A +H A + + G V T+G G++G LGH +E + V
Sbjct: 176 -EGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVCSLLF 358
+ V AL + VA G + T V+E G+VY++G GE LGH N +V SLL
Sbjct: 235 RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294
Query: 359 LSIFQYLQIW 368
+ Q W
Sbjct: 295 KLVLQITCGW 304
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 9/313 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+A R Q G GH++ +T +G VY++G G+LGHG ++ PR + L+G I
Sbjct: 29 DALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
Q G+ T ++ +G +Y +G +G+ +G + ++P LVE+LK++ V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPYLVETLKSMQVRQVACG 146
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ T VL VYT+ + GH TE + P P+ L +VQI+A C
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKSIVQISA--CGFHT 203
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A G V++ G G G+LGH S ++ R ++ ++ V A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQV--ACGGFHTAAVTE 260
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG G +G LGHG++ ++VP V++L + + + G T +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320
Query: 337 CGESASLGHNAIA 349
G+ LGHN A
Sbjct: 321 NGDHGKLGHNDTA 333
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 14/294 (4%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
WK V R + E + Q G H+ AVT G +Y++G G+LGHG P
Sbjct: 73 WKFVPRLV---EELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTP 129
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVES 145
+ +L+ +++ Q A G+ T+++ + VY +G G + +G +G + + P VE
Sbjct: 130 YLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCP--VEE 187
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPV 204
L+ +VQ + F TA LS G V+TF G RLGH++E N +P + L V
Sbjct: 188 LRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVARFVDALAGKRV 245
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
Q+A G + A+ +G VY+ G G G+LGHG + ++ P +E LL + +
Sbjct: 246 KQVACGGFHTAAVT--ETG-EVYTWGGGEHGQLGHGDKVNKTVPTRVES--LLEKLVLQI 300
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
G H + G V TWG G +G LGH + ++PK V L+ + I VA+
Sbjct: 301 TCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVAS 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M VYS G G G+LG G +D+ P I+ L + V +A G+ H V+ ++G V TW
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTEEGEVYTW 58
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G G LGHG+ + VP++V+ L V G Y T V+ GD+Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 344 GH 345
GH
Sbjct: 119 GH 120
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T G VY++G+ G+LGH T + P+P+ L G R+I A+
Sbjct: 299 QITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEH 358
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ + D A + S + Y +L+ S + + F+++ + A+L+
Sbjct: 359 TVALVDP---VAMLRASMLTSSYVGDMRQLIDSAEFSDV---TFLIEGRAVHSHRAILAA 412
Query: 167 EGRVYTFSWGNDARLGHHTE-PNDVEPHPL-LGTLENIPVVQIAAGYCYLLAL 217
+ + + R H E P P+ L LE I V I G L L
Sbjct: 413 RSDHFRAMFSSGMRESHEQEIPLSHTRVPVFLALLEYIYVDSINVGAEMALEL 465
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 6/282 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VYS+G GQLGHG + + +PR + + G + Q + G T ++ + G+V+ FG+ +
Sbjct: 8 VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
FG+ G T V++P LV +L+ V Q A G T L G++YT+ G RLGH
Sbjct: 68 FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
E P L+ +L+ V +AAG + + G + + G G G+LGHG T
Sbjct: 128 GDEVRQASP-KLVESLQGKEVTFVAAGGFHSSVII---EGGNLLTWGGGYFGQLGHGDET 183
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
D K P++++ Q VA G H ++ Q V TWG G +G LG G+EE + P
Sbjct: 184 DRKTPKMVKGVQQCIAHE--VACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPI 241
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ AL V IH++TG + + ++ +G +Y++G G+ LGH
Sbjct: 242 MITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H+ A+ G +Y++GS G+LGHG + P+ + SLQG + AAG
Sbjct: 97 QVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFH 156
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +I + G + +G FG+ +G + + +P++V+ ++ + A G T +L++
Sbjct: 157 SSVIIEGGNLLTWGGGYFGQLGHGDETDR--KTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+T+ G +LG E EP ++ L+ + V+ I+ G + AL + +
Sbjct: 215 SQEVWTWGSGEFGKLGIGDEEKHAEP-IMITALQGVGVIHISTGGFHSAALTSEG---VL 270
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIE 252
Y+ G G G+LGHG + P ++E
Sbjct: 271 YTWGGGDKGQLGHGDENSQNIPVVVE 296
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 164 LSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+SREG VY++ G +LGH E +P ++ L V Q++ G + L
Sbjct: 1 MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGE 59
Query: 223 GMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
V++ G G G+LG G+ + P L+ Q +++ V A G H + +G++
Sbjct: 60 ---VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQV--ACGWHHTCALIDNGQL 114
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWG G YG LGHG+E ++ PK+V++L + VA G + + V+ E G++ ++G G
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYF 174
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 175 GQLGHGDETD 184
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ +E + AG HS + G + ++G GQLGHG + P+ ++ +Q
Sbjct: 140 ESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIA 199
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ A G T++++ + +V+ +G FG + G+ + P ++ +L+ + V+ + G
Sbjct: 200 HEVACGTHHTLMLTQSQEVWTWGSGEFG--KLGIGDEEKHAEPIMITALQGVGVIHISTG 257
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
F +A L+ EG +YT+ G+ +LGH E + +NIPVV
Sbjct: 258 GFHSAALTSEGVLYTWGGGDKGQLGHGDENS-----------QNIPVV 294
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +WG G G LGHG+E+ + P++V A V+ G+ T ++ E+G+V++FG G
Sbjct: 7 EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66
Query: 339 ESASLGHNAIADGQVCSLLFLSIFQ 363
LG A V + +S Q
Sbjct: 67 NFGQLGQGASVTANVSTPALVSALQ 91
>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 171/352 (48%), Gaps = 15/352 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
+C I+ ++ ++DL +CG +WK VLRFL + E N Q G H+
Sbjct: 64 LCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+ + V YS GS+ G LGHG TT+ R I + Q +A + +
Sbjct: 124 LLIKDSSV-YSCGSSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQS 181
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+V+ G +S +G + + P+LVE+LK + Q A G FT L+ +G VYT
Sbjct: 182 GEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LGH + P ++ LE + PVVQIAAG Y A+A G V+S G G
Sbjct: 241 GTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSG 296
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
LGHG + +E PR I+ F+ + V ++AG H + G V TWG G G LG
Sbjct: 297 SNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALG 356
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
HG+E ++ P+++ +L A+ V TFV+ + G VY FG SLG
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGA 104
+Q A H+ V G V++ G NSS GHG T +RPR + +L+G+ Q AAG
Sbjct: 166 AQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGL 225
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAV 163
T+ ++ G VY G ++ G+ +G T +P++VE L+ + VVQ A G +
Sbjct: 226 SFTVFLTMKGHVYTCGTNTHGQLGHG--DTVDRRTPKIVELLEGVGPVVQIAAGPSYAMA 283
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPS 222
++ +G V++F G++ LGH + N++ P + + I VV+I+AG +++AL S
Sbjct: 284 VTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL--DSS 341
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G VY+ G G G LGHG D+ P ++ L + V V A V+ G V
Sbjct: 342 GF-VYTWGKGYCGALGHGDEIDKTTPEILSS--LKSHLAVQVCARKRKTFVLVDTGSVYG 398
Query: 283 WGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+GW +G LG G + P ++ +L ++TG Y T V G ++ FG E
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNE 458
Query: 340 SASLGHNAIADGQVCSLLFLS 360
A LGH+ + V + +F S
Sbjct: 459 RAQLGHDTLRGCPVPTEIFAS 479
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 42 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
RR+ + AG H +A+ S G VY++G G LGHG ++ P + SL+ +
Sbjct: 319 RRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAV 378
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 157
Q A +T ++ D G VY FG FG + +G + V P +++SL+ ++ Q + G
Sbjct: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTG 438
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHT-----EPNDVEPHPLLGTLEN 201
+ T + +G+++ F A+LGH T P ++ P + +E
Sbjct: 439 LYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFASPTVAEMER 487
>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera]
gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 171/352 (48%), Gaps = 15/352 (4%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHS 55
+C I+ ++ ++DL +CG +WK VLRFL + E N Q G H+
Sbjct: 64 LCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+ + V YS GS+ G LGHG TT+ R I + Q +A + +
Sbjct: 124 LLIKDSSV-YSCGSSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQS 181
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+V+ G +S +G + + P+LVE+LK + Q A G FT L+ +G VYT
Sbjct: 182 GEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LGH + P ++ LE + PVVQIAAG Y A+A G V+S G G
Sbjct: 241 GTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSG 296
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
LGHG + +E PR I+ F+ + V ++AG H + G V TWG G G LG
Sbjct: 297 SNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALG 356
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
HG+E ++ P+++ +L A+ V TFV+ + G VY FG SLG
Sbjct: 357 HGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 13/320 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGA 104
+Q A H+ V G V++ G NSS GHG T +RPR + +L+G+ Q AAG
Sbjct: 166 AQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGL 225
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAV 163
T+ ++ G VY G ++ G+ +G T +P++VE L+ + VVQ A G +
Sbjct: 226 SFTVFLTMKGHVYTCGTNTHGQLGHG--DTVDRRTPKIVELLEGVGPVVQIAAGPSYAMA 283
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPS 222
++ +G V++F G++ LGH + N++ P + + I VV+I+AG +++AL S
Sbjct: 284 VTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL--DSS 341
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G VY+ G G G LGHG D+ P ++ L + V V A V+ G V
Sbjct: 342 GF-VYTWGKGYCGALGHGDEIDKTTPEILSS--LKSHLAVQVCARKRKTFVLVDTGSVYG 398
Query: 283 WGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+GW +G LG G + P ++ +L ++TG Y T V+ G ++ FG E
Sbjct: 399 FGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNE 458
Query: 340 SASLGHNAIADGQVCSLLFL 359
A LGH+ + V + +F+
Sbjct: 459 RAQLGHDTLRGCPVPTEIFV 478
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S +G +S+A++ + VYS+G G+LGHG + + P+PIR+L G I++ A G
Sbjct: 69 SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGD 128
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T+ ++D G++++FG++ G+ G ++ PQ VESL+ V A G +
Sbjct: 129 THTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL--PQPVESLRGQEVTSIACGGEHSLAA 186
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G V+ + WG LG + P + G LE + V +A G+ + ++A +G
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRH--SIAADETG- 242
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
AVY+ G G+LGHG D+ P+ +E L +V+ AG W H + G++ +W
Sbjct: 243 AVYTFGWSKYGQLGHGDCIDQLVPKAVES---LKDSRIVLIAGGWRHTSAADDSGKLYSW 299
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G LG G+ + P VQ LN ++ G TF V+E GDV+S+G G + L
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQL 359
Query: 344 GHNAIAD 350
GHN D
Sbjct: 360 GHNEPKD 366
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++AVT G ++SFG N +GQLG GTT + P+P+ SL+G + A G ++
Sbjct: 127 GDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAA 186
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ AG V+A+G +G G + + P V L+ + V A G + G V
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPPEDRHL--PSQVHGLEGVKVTSVACGWRHSIAADETGAV 244
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
YTF W +LGH + + P + +L++ +V IA G+ + A SG +YS G
Sbjct: 245 YTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIVLIAGGWRH--TSAADDSGK-LYSWG 300
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYG 289
G+LG GS TD P + Q LN PV + + W H V + G V +WG G G
Sbjct: 301 WNKFGQLGIGSNTDSNAPVPV---QGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNG 357
Query: 290 CLGHGNEECESVPKVVQALN----DVKAIHVATGDYTTFVVSED 329
LGH + + P + L+ ++ + V+ TT+V D
Sbjct: 358 QLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASPLTTYVPPAD 401
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 93/256 (36%), Gaps = 53/256 (20%)
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
++ ++ V + G+ + L G ++ G D +LGH +P + L
Sbjct: 10 AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIF-HLMQASC 68
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----- 259
+ +G Y +AL+ QP VYS G G G+LGHG D P+ I N+
Sbjct: 69 SAVCSGAEYSVALS-QPRN-EVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVAC 126
Query: 260 ------------------------------------QPV---------VVAAGAWHAAVV 274
QPV +A G H+
Sbjct: 127 GDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAA 186
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V WGWGRYG LG G E +P V L VK VA G + E G VY+
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYT 246
Query: 335 FGCGESASLGHNAIAD 350
FG + LGH D
Sbjct: 247 FGWSKYGQLGHGDCID 262
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 13/311 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VY++G GQLG G T +++ P + +LQ + +Q + G+G T++++D G+VY +G+
Sbjct: 2 TVYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G +G G K V P+LVE L++ V Q G++ TA ++ G +YT+ G +LG
Sbjct: 62 DDGRLGHGDNGWKFV--PRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
H E P L+ +++ + V Q+A G + + L VY+ G G GHG
Sbjct: 120 HGNENGHSTP-SLVESIKGLYVRQVACGSRHTVVLL---ENQDVYTWGDKENGVSGHGDT 175
Query: 243 TDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ ++ P + + +N++ ++A +H A + ++G+V T+G G++G LGH +E + V
Sbjct: 176 SGHQYSPYCVSELVEINIKQ--ISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPV 233
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVCSLL 357
K + AL + VA G + T V+E G V+++G GE LGH N I +V SL+
Sbjct: 234 AKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLI 293
Query: 358 FLSIFQYLQIW 368
+I Q W
Sbjct: 294 DKNIIQLTCGW 304
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 9/310 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA R+ Q G GH++ +T G VY++G G+LGHG ++ PR + L+ ++
Sbjct: 29 EALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKV 88
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
Q G+ T ++ +G++Y +G +G+ +G + ++P LVES+K ++V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGH--STPSLVESIKGLYVRQVACG 146
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ T VL VYT+ + GH T + P+ + L I + QI+A C
Sbjct: 147 SRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPY-CVSELVEINIKQISA--CGFHT 203
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A +G V++ G G G+LGH S ++ + I+ L+ + VA G +H A V +
Sbjct: 204 AALSENGQ-VFTFGEGKFGRLGHNSERNQPVAKCIDA--LIGKRIKQVACGGFHTAAVTE 260
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG G +G LGHG++ + +P V++L D I + G T +++ G+V+++G
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
Query: 337 CGESASLGHN 346
G+ LGHN
Sbjct: 321 NGDHGKLGHN 330
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 25/335 (7%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
WK V R + E ++ Q G H+ AVT G +Y++G G+LGHG P
Sbjct: 73 WKFVPRLV---EDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTP 129
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT----SPQL 142
+ S++G+ + Q A G+ T+++ + VY ++G+ E GV G + SP
Sbjct: 130 SLVESIKGLYVRQVACGSRHTVVLLENQDVY-----TWGDKENGVSGHGDTSGHQYSPYC 184
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
V L I + Q + F TA LS G+V+TF G RLGH++E N P+ ++ +
Sbjct: 185 VSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERN----QPVAKCIDAL 240
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+I C A V++ G G G+LGHG + ++ P +E L++ +
Sbjct: 241 IGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVES--LIDKNII 298
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-GDY 321
+ G H + G V TWG G +G LGH + + PK+++ N + I VA+ ++
Sbjct: 299 QLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEH 358
Query: 322 TTFVVSEDGDVY------SFGCGESASLGHNAIAD 350
T +V+ D ++ S+ C + ++ +D
Sbjct: 359 TVALVNPDANLQNSVLHSSYKCDMRKLIDNDEFSD 393
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M VY+ G G G+LG G +D+ HP L+E Q + Q V ++ G+ H V+ DG+V TW
Sbjct: 1 MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQ--DRQTVQISCGSGHTVVLTDDGKVYTW 58
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G G LGHG+ + VP++V+ L D K V G Y T V+ G++Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118
Query: 344 GH 345
GH
Sbjct: 119 GH 120
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 24/311 (7%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G+VYS+G GQLG G T ++ RP + +L+ ++Q A G+G T+++S+ G VY +G+
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G G K V P++VE+L+ +VQA G++ TA ++ +G +YT+ G +L
Sbjct: 67 GDDGRLGHGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKL 124
Query: 182 GHHTEPNDVEPHPLLGTL---ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
GH E P P + E V QIA G + + L VY+ G G +G
Sbjct: 125 GHGNESG--HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGK---VYTWGDKENGVVG 179
Query: 239 HGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
H + ++ PR++E Q + V AA +H A + G + TWG G++G LGHG E
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQV--AACGFHTAALTAAGEIFTWGEGKFGRLGHGMER 237
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVV-----------SEDGDVYSFGCGESASLGHN 346
+ VP++V+AL + HVA G + + + E G VY+FG G+ LGH
Sbjct: 238 NQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHG 297
Query: 347 AIADGQVCSLL 357
+ V +L+
Sbjct: 298 DVRKVSVPTLV 308
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 20/285 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G GH++ ++ G VY++G G+LGHG ++ PR + +L+G RI+QA G+
Sbjct: 44 QVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYH 103
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVL 164
T ++D G++Y +G +G+ +G + +P +V+ L++ V Q A G+ T VL
Sbjct: 104 TAAVTDKGELYTWGGGMYGKLGHGNESGH--PTPCMVKHLRDEGARVTQIACGSRHTVVL 161
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G+VYT+ + +GH +L +L+ V Q+AA C A +G
Sbjct: 162 TDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAA--CGFHTAALTAAG- 218
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---------- 274
+++ G G G+LGHG ++ PR++E L+ + VA G +H+A +
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVE--ALMGKRVGHVACGGFHSAAILDSGELYTWG 276
Query: 275 -GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
G+ G+V T+G G +G LGHG+ SVP +V L + + VA+
Sbjct: 277 GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVAS 321
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
+Q G H++ +T G VY++G +G +GH + ++ PR + SLQ + Q AA
Sbjct: 149 TQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG 208
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++ AG+++ +G+ FG +G++ ++V P++VE+L V A G F +A +
Sbjct: 209 FHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV--PRMVEALMGKRVGHVACGGFHSAAI 266
Query: 165 -----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
G+VYTF G+ +LG H + V L+ L + VV++A+ +
Sbjct: 267 LDSGELYTWGGGEHGQVYTFGNGDHGKLG-HGDVRKVSVPTLVAGLVKMHVVKVASYNEH 325
Query: 214 LLALACQPS 222
ALA S
Sbjct: 326 TAALAGASS 334
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 163/314 (51%), Gaps = 11/314 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG V+++G++ G+ G+ T+ PQ +++ + + V A G TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVS---SSG 252
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
++Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 253 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 309
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G G+ E P V N+ K + VA G T ++E +V+S+G G S L
Sbjct: 310 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 369
Query: 344 GHNAIADGQVCSLL 357
GH I D + ++
Sbjct: 370 GHGEIVDRNIPKMI 383
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 10/265 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H +AVT G V+S+G N +GQLG G TE+ P+ I++ +G+R+ AAGA
Sbjct: 132 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 191
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T +++ G +Y +G +G G + +L+ P+ V S+ +V A G T +S
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVSSVNGQKMVLVACGWRHTITVS 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ W +LGH + + PH L L++ + QI+ G+ + +ALA
Sbjct: 250 SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQISGGWRHTMALAADGK--- 305
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWG 284
+Y G G++G G D P Q N Q VV A W H + + V +WG
Sbjct: 306 LYGWGWNKFGQVGVGDNEDHCSPV---QVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 362
Query: 285 WGRYGCLGHGNEECESVPKVVQALN 309
G G LGHG ++PK++ AL+
Sbjct: 363 RGTSGQLGHGEIVDRNIPKMIDALS 387
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 140/301 (46%), Gaps = 55/301 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S GVV S+G GQLGHG E+ RP P T+L
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 66
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ +F +A GV + + + TA E +
Sbjct: 67 TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 98 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 350 D 350
D
Sbjct: 272 D 272
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 163/314 (51%), Gaps = 11/314 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 84 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 143
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG V+++G++ G+ G+ T+ PQ +++ + + V A G TA +
Sbjct: 144 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 201
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 202 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVS---SSG 257
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
++Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 258 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 314
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G G+ E P V N+ K + VA G T ++E +V+S+G G S L
Sbjct: 315 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 374
Query: 344 GHNAIADGQVCSLL 357
GH I D + ++
Sbjct: 375 GHGEIVDRNIPKMI 388
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 10/265 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H +AVT G V+S+G N +GQLG G TE+ P+ I++ +G+R+ AAGA
Sbjct: 137 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 196
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T +++ G +Y +G +G G + +L+ P+ V S+ +V A G T +S
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLI--PEKVSSVNGQKMVLVACGWRHTITVS 254
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ W +LGH + + PH L L++ + QI+ G+ + +ALA
Sbjct: 255 SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQISGGWRHTMALAADGK--- 310
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWG 284
+Y G G++G G D P Q N Q VV A W H + + V +WG
Sbjct: 311 LYGWGWNKFGQVGVGDNEDHCSPV---QVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 367
Query: 285 WGRYGCLGHGNEECESVPKVVQALN 309
G G LGHG ++PK++ AL+
Sbjct: 368 RGTSGQLGHGEIVDRNIPKMIDALS 392
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 139/301 (46%), Gaps = 55/301 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S GVV S+G GQLGHG E+ RP P ++ AA
Sbjct: 32 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVPT-------VLTAA-------- 74
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
F +A GV + + + TA E +
Sbjct: 75 --------------FDDAPGGVASVVICGA------------------DHTTAYSDEELQ 102
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 103 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 158
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 216
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 217 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 350 D 350
D
Sbjct: 277 D 277
>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 489
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 160/350 (45%), Gaps = 11/350 (3%)
Query: 2 CQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFL------LAGEACCRRENSQAIAGPGHS 55
CQ +F+ R +L +C G+WKLVL FL + AG H+
Sbjct: 60 CQMHPVFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHT 119
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAG 114
+ V KG +Y+ G+ S + RP I RI+Q +A ++++G
Sbjct: 120 LLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESG 179
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVY FG + G G + ++ P LV +L+ Q + G +T L+R G ++++
Sbjct: 180 QVYTFGDNVSCCCGVGESG-QPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWG 238
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ +LG P + E+ PV Q++AG C+ LA+ SG ++S G G
Sbjct: 239 CNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVT--KSGQ-LFSWGYGSN 295
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
LGH E P+ +E +L + AAG H+A + G V TWG G G LGHG
Sbjct: 296 YCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHG 355
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ P VV AL +A+ V TFV+ ++G V+SFG SLG
Sbjct: 356 AGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLG 405
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
R + AAG T+L+ G++YA G S V + S L + I + A
Sbjct: 108 RDVLVAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISA 167
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ A ++ G+VYTF G + L+ TLE P Q++ G Y
Sbjct: 168 NFNH--AAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYT 225
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
+AL ++S GC G+LG G+ ++ PR IE+F N PV V+AG H
Sbjct: 226 VALT---RNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESN--PVAQVSAGICHTLA 280
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGD 331
V + G++ +WG+G CLGH + E PK V+ +D+ I A GD + + G
Sbjct: 281 VTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGY 340
Query: 332 VYSFGCGESASLGHNAIAD 350
VY++G G +LGH A D
Sbjct: 341 VYTWGKGYCGALGHGAGTD 359
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A AG HS A+ S G VY++G G LGHG ++ P + +L+ R +Q A +T
Sbjct: 325 AAAGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKT 384
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQG---TKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
++ D G V++FG ++ GVQG + V SPQ ++ +L V A G + T V
Sbjct: 385 FVLGDNGTVHSFGWMAY--HSLGVQGKSASDTVVSPQSLDLALHGHKVSTIAAGMYHTLV 442
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDV 190
++R+G ++ F + ++LG + N+
Sbjct: 443 ITRKGAIFGFGDNDSSQLGPVSVTNET 469
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 9/284 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+++G GQLG G T ++ P + +L+G+ + Q A G+G T++++ G+V+ +G+
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G +G G K V P++ +SL V+Q G++ TA ++ G +YT+ G +LGH
Sbjct: 62 DGRLGHGDNGWKYV--PRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGH 119
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
E P + L V QIA G + A + A+Y+ G G GHG
Sbjct: 120 GDEAGHATPKRVE-ALVGATVAQIACGSRHT---AIVTASGALYTWGDKENGVAGHGETE 175
Query: 244 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ PRL+E + + +A +H A+V G + TWG G++G LGH +E P
Sbjct: 176 GHQYLPRLLESMAAKRVAQI--SACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP 233
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
+V + K V+ G + T VVSEDG +Y+FG GE LGHN
Sbjct: 234 TIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHN 277
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 156/300 (52%), Gaps = 9/300 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G GH++ +T+ G V+++G G+LGHG ++ PR +SL G ++Q G+
Sbjct: 37 QIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYH 96
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++ G +Y +G +G+ +G + +P+ VE+L V Q A G+ TA+++
Sbjct: 97 TAAVTGNGDLYTWGGGMYGKLGHGDEAGH--ATPKRVEALVGATVAQIACGSRHTAIVTA 154
Query: 167 EGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ + GH TE + P LL ++ V QI+A C +G
Sbjct: 155 SGALYTWGDKENGVAGHGETEGHQYLPR-LLESMAAKRVAQISA--CGFHTAIVTDAG-E 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+++ G G G+LGH S + P +++ ++ +P V+ G +H AVV +DGR+ T+G
Sbjct: 211 LFTWGEGKFGRLGHMSERNCHSPTIVDY--MVGKKPRQVSCGGFHTAVVSEDGRLYTFGG 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G +G LGH + + P V+AL+ + + G + ++ G VY++G G+ LGH
Sbjct: 269 GEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGH 328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 16/283 (5%)
Query: 27 WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
WK V R LAG+ Q G H+ AVT G +Y++G G+LGHG
Sbjct: 72 WKYVPRMTQSLAGQIVL-----QVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHA 126
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 143
P+ + +L G + Q A G+ T +++ +G +Y +G G A +G +G + + P+L+
Sbjct: 127 TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYL--PRLL 184
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
ES+ V Q + F TA+++ G ++T+ G RLGH +E N P ++ +
Sbjct: 185 ESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP-TIVDYMVGKK 243
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
Q++ C A +Y+ G G G+LGH R ++ P +E + + +
Sbjct: 244 PRQVS---CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQIT 300
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
G H+ + G V TWG G +G LGHGN +VP+ V+
Sbjct: 301 --CGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
AV++ G G G+LG G +D+ P ++ + + +Q +A G+ H V+ DG V TWG
Sbjct: 1 AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ--IACGSGHTVVLTTDGEVFTWG 58
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LGHG+ + VP++ Q+L + V G Y T V+ +GD+Y++G G LG
Sbjct: 59 RGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118
Query: 345 H 345
H
Sbjct: 119 H 119
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 158/307 (51%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQGI+I Q A G
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGD 138
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG+V ++G++ G+ G L+ PQ ++S + + V A G TA +
Sbjct: 139 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQSFEGVCVKMIAAGAEHTAAV 196
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++E +V IA G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV-SSVEGEKMVLIACGWRHTITVS---SSG 252
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
++Y+ G G+LGHG D P +E + ++ + +G W H + DG++ W
Sbjct: 253 SLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQI---SGGWRHTMALTSDGKLYGW 309
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G G+ + P V+ D K VA G T +E +V+S+G G S L
Sbjct: 310 GWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQL 369
Query: 344 GHNAIAD 350
GH I D
Sbjct: 370 GHGEIVD 376
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRT 107
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 29 AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHT 88
Query: 108 MLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
S D QVY++G FG +G + V +PQ V++L+ I + Q A G+ ++
Sbjct: 89 TAYSEDEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTM 146
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G V ++ + +LG T + + P + + E + V IAAG + A+ +
Sbjct: 147 AGEVQSWGRNQNGQLGLGTTEDSLLPQKIQ-SFEGVCVKMIAAGAEHTAAVTEDGD---L 202
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y G G G LG G R D P + + + V++A G H V G + T+GW
Sbjct: 203 YGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKM--VLIACGWRHTITVSSSGSLYTYGWS 260
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+YG LGHG+ E VP ++AL D ++ G T ++ DG +Y +G + +G
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 318
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I+S +G+ + AAGA
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S++ +V A G T +S
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PEKVSSVEGEKMVLIACGWRHTITVSS 250
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L++ + QI+ G+ + +AL S +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDSSISQISGGWRHTMALT---SDGKL 306
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + Q V A W H + V +WG
Sbjct: 307 YGWGWNKFGQVGVGDTDDHCFPV---QVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGR 363
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + P ++ AL+
Sbjct: 364 GTSGQLGHGEIVDRNKPVMIDALS 387
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 154/295 (52%), Gaps = 10/295 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VYS+G G+LGHG + + + P+PI++L G+RI Q A G + ++ G+V ++G++
Sbjct: 90 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQ 149
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G+ G LV PQ +++ + + V A G TA ++ +G +Y + WG LG
Sbjct: 150 NGQLGLGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 207
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ + P + T+E + +V++A G+ + ++++ S +Y+ G G+LGHG
Sbjct: 208 GDRNDRLVPEKV-STVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFE 263
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
D P +E Q + + +G W H + DG++ WGW ++G +G G+ P
Sbjct: 264 DHLTPHKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSP 320
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
V+ ++ K +H++ G T V+E +V+S+G G + LGH D + ++
Sbjct: 321 VQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMI 375
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ + AAGA
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 184
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G++Y +G +G G + +LV P+ V +++ + +V+ A G T +S
Sbjct: 185 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 242
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L EN+ + +I+ G+ + +AL S +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 298
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 299 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 355
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG ++PK+++ L+
Sbjct: 356 GTNGQLGHGESIDRNIPKMIEVLS 379
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 14 PVR-----RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66
Query: 148 NIFVVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
VV G T S +VY++ WG+ RLGH + P P+ L + + Q
Sbjct: 67 GHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHGLRIKQ 125
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
IA G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VAA
Sbjct: 126 IACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAA 180
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA H A V +DG + WGWGRYG LG G+ VP+ V + VK + VA G T V
Sbjct: 181 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 240
Query: 327 SEDGDVYSFGCGESASLGHNAIAD 350
S G +Y++G + LGH D
Sbjct: 241 SSSGGLYTYGWSKYGQLGHGDFED 264
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L + V
Sbjct: 18 VLLISAGASHSVALL---SGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSA--LDGHEVVS 72
Query: 264 VAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H + +V +WGWG +G LGHGN P+ ++AL+ ++ +A GD
Sbjct: 73 VTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSH 132
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ DG+V S+G ++ LG D V
Sbjct: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV 163
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 152/309 (49%), Gaps = 11/309 (3%)
Query: 44 ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E S G H+ A++ S VYS+G G+LGHG + + + P+PI++L+G+ + Q A
Sbjct: 67 EISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIAC 126
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + I+ G+V +G++ G+ G+ T+ V +P + + + + V A G T
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQ--LGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTT 184
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++ G++Y + WG LG + + P + + + +A G+ + + C
Sbjct: 185 AVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-MKMVACGWRHTI---CVAE 240
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVC 281
+Y+ G G+LGHG D P Q Q L + + G W H + DGR+
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPH---QVQALKSKKIQAITGGWRHTFALDSDGRLY 297
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WGW ++G +G GN E +S P++V+ L D V G T +++ G+VYS+G G S
Sbjct: 298 GWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSG 357
Query: 342 SLGHNAIAD 350
LGH D
Sbjct: 358 QLGHGDTVD 366
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 10/267 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G H +A+T+ G V +G N +GQLG G TE+ P + + +G+ + AAG
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A T +++ G++Y +G +G G + +LV P V ++ + A G T
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLV--PDQVAAVAGELMKMVACGWRHTIC 237
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ G +YTF W +LGH + + PH + L++ + I G+ + AL S
Sbjct: 238 VAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQ-ALKSKKIQAITGGWRHTFAL---DSD 293
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
+Y G G++G G+ D+ P+L++ Q Q V V W H + G V +
Sbjct: 294 GRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQD---QVVTVVQCGWRHTLAMTDRGNVYS 350
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALN 309
WG G G LGHG+ S PK ++ L+
Sbjct: 351 WGRGTSGQLGHGDTVDRSTPKRIEILS 377
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 91 SLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
S +G+R ++ +AGA ++ + V ++G+ G+ +G + P +V +L +
Sbjct: 8 SSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF--PTIVSALDD 65
Query: 149 IFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+ G T LS + VY++ WG+ RLGH + P P+ L+ + V QI
Sbjct: 66 CEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK-ALKGLEVKQI 124
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + LA+ V G G+LG G D P + F+ + ++ ++AAG
Sbjct: 125 ACGDSHCLAITTDGE---VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK--MLAAG 179
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
A H V ++G++ WGWGRYG LG G+ E VP V A+ VA G T V+
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVA 239
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
E G++Y+FG + LGH AD
Sbjct: 240 ESGNMYTFGWSKYGQLGHGDFAD 262
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 167/315 (53%), Gaps = 21/315 (6%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-----TEEEWRPRPIRSLQGI- 95
R+ + AG S +T +G VY G NS+GQL T + I ++G+
Sbjct: 72 RKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLP 131
Query: 96 ---RIIQAAA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+++Q + GA ++++ AGQVY+ G ++ G+ G+ TK+ S LVESLK++
Sbjct: 132 PDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQ--LGLGSTKMSPSLLLVESLKHVR 189
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA- 209
V+ A+ + V+S +G ++F + +LG T PN + PH + L + +V++AA
Sbjct: 190 VLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV--ELPSPHLVRLAAC 247
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + + L GM V+S G L G+LG GSR+ P LI Q ++A G
Sbjct: 248 GQYHTIFLT--EEGM-VFSCGKNLNGQLGLGSRSSTNVPTLIAALQ--ERPASMIACGYS 302
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H VV +DG++ T+G+ G LG G+ + S P V+ L +VK + ++ G + T V+SE
Sbjct: 303 HTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSES 362
Query: 330 GDVYSFGCGESASLG 344
G+++SFGC LG
Sbjct: 363 GELWSFGCNCHGQLG 377
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
C+ G H + VTS G VYS G N+ GQLG G+T+ + SL+ +R++ A
Sbjct: 134 CKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSA 193
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ ++++S G ++FG + G+ G + +L+ P VE V AA G +
Sbjct: 194 SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLL--PHRVELPSPHLVRLAACGQYH 251
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ EG V++ + +LG + + P L+ L+ P IA GY + +
Sbjct: 252 TIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVP-TLIAALQERPASMIACGYSHTCVVL-- 308
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+++ G G+LG G P +E L N++ V ++ G V+ + G +
Sbjct: 309 -EDGKLFTFGYNHQGQLGLGHTDSVSSPMQVE--TLRNVKVVKISCGTHFTCVLSESGEL 365
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
++G +G LG G+ VP +V ++ +A G + +S
Sbjct: 366 WSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF-- 173
V+A G++ GE + ++ S LV+SL+ +V+ A G+ + L+ EG+VY
Sbjct: 42 VFACGQNRKGELGHSTFREQVEMS--LVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGL 99
Query: 174 -SWGNDARLGHHTEPNDVEPHPL-LGTLENIP----VVQIAA--GYCYLLALACQPSGMA 225
S G AR H N + + + +E +P VVQ++ G ++L + S
Sbjct: 100 NSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVT---SAGQ 156
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS GC G+LG GS + P L+ L +++ + + H+ VV DG ++G
Sbjct: 157 VYSCGCNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGL 214
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G + +P V+ + A G Y T ++E+G V+S G + LG
Sbjct: 215 NDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGL 274
Query: 346 NAIADGQVCSLL 357
+ + V +L+
Sbjct: 275 GSRSSTNVPTLI 286
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+IA + + +YS+G G+LGHG + + + P+PI +LQG++I Q A G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ GQV+++G++ G+ G L+ PQ +++ + + V A G T +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +Y + WG LG + P + ++E +V +A G+ + ++++ S
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
A+Y+ G G+LGHG D PR +E + + P+ +G W H V +DG++ W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G + P V ++ K + VA G T ++E+ +++S+G G S L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366
Query: 344 GHNAIADGQVCSLL 357
GH I D ++
Sbjct: 367 GHGEIIDRNTPKMI 380
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS A+ S +V S+G GQLGHG +E+ P + S R+ GA T+
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
SD Q+Y++G FG +G + V +PQ + +L+ + + Q A G+ ++ G
Sbjct: 88 YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V+++ + +LG + + P + E + V IAAG + A+ G +Y
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG R D P + + + V+VA G H+ V G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ + VP+ ++AL DV ++ G T V+EDG +Y +G + +G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVG 315
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H + VT G V+S+G N +GQLG G ++ P+ I++ +G+ + AAGA
Sbjct: 130 QIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEH 189
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T I++ G +Y +G +G G+ + P+ V S++ +V A G + +S
Sbjct: 190 TTAITEGGDLYGWGWGRYG--NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSS 247
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + P L L+++P+ QI+ G+ + +A+A +
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQDHLVPRKLE-ALKDVPISQISGGWRHTMAVA---EDGKL 303
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G D P + + Q +V A W H + ++ + +WG
Sbjct: 304 YGWGWNKFGQVGVEDNVDHCSPV---EVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + PK++ AL+
Sbjct: 361 GASGQLGHGEIIDRNTPKMIDALS 384
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+I +AGA + + V ++G+ G+ +G + V P ++ S V
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80
Query: 157 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T S E ++Y++ WG+ RLGH + P P++ L+ + + QIA G + L
Sbjct: 81 GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ V+S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H +
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G + WGWGRYG LG + + SVP+ V ++ K + VA G + VS G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 255 GWSKYGQLGHGDFQD 269
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+IA + + +YS+G G+LGHG + + + P+PI +LQG++I Q A G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ GQV+++G++ G+ G L+ PQ +++ + + V A G T +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +Y + WG LG + P + ++E +V +A G+ + ++++ S
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
A+Y+ G G+LGHG D PR +E + + P+ +G W H V +DG++ W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G + P V ++ K + VA G T ++E+ +++S+G G S L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366
Query: 344 GHNAIADGQVCSLL 357
GH I D ++
Sbjct: 367 GHGEIIDRNTPKMI 380
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS A+ S +V S+G GQLGHG +E+ P + S R+ GA T+
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
SD Q+Y++G FG +G + V +PQ + +L+ + + Q A G+ ++ G
Sbjct: 88 YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V+++ + +LG + + P + E + V IAAG + A+ G +Y
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG R D P + + + V+VA G H+ V G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ + VP+ ++AL DV ++ G T V+EDG +Y +G + +G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVG 315
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H + VT G V+S+G N +GQLG G ++ P+ I++ +G+ + AAGA
Sbjct: 130 QIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEH 189
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T I++ G +Y +G +G G+ + P+ V S++ +V A G + +S
Sbjct: 190 TTAITEGGDLYGWGWGRYG--NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSS 247
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + P L L+++P+ QI+ G+ + +A+A +
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQDHLVPRKLE-ALKDVPISQISGGWRHTMAVA---EDGKL 303
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G D P + + Q +V A W H + ++ + +WG
Sbjct: 304 YGWGWNKFGQVGVEDNVDHCSPV---EVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + PK++ AL+
Sbjct: 361 GASGQLGHGEIIDRNTPKMIDALS 384
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+I +AGA + + V ++G+ G+ +G + V P ++ S V
Sbjct: 23 VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80
Query: 157 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T S E ++Y++ WG+ RLGH + P P++ L+ + + QIA G + L
Sbjct: 81 GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ V+S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H +
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G + WGWGRYG LG + + SVP+ V ++ K + VA G + VS G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 255 GWSKYGQLGHGDFQD 269
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 14/338 (4%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S I G H+ A + + + +YS+G G+LGHG + + + P+PI +LQGI+I Q A G
Sbjct: 76 SVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGD 135
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++DAGQV+++G++ G + G+ T+ PQ + + + + V A G TA +
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNG--QLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +Y + WG LG + + P + ++E +V +A G+ + + ++ S
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDRNDRLVPEK-VSSVEGEKMVLVACGWRHTVTVS---SSG 249
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + AG W H V DG++ W
Sbjct: 250 DLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQI---AGGWRHTMAVAGDGKLYGW 306
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G + P V ++ K VA G T ++E+ +V+S+G G S L
Sbjct: 307 GWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQL 366
Query: 344 GHNAIADGQVCSLL-FLSIFQYLQIWLNLSSYRHLPTF 380
GH I D ++ LS+ Y NL S + +P
Sbjct: 367 GHGEIIDRNTPKMIDALSLDGYAC--KNLESSKAVPMI 402
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 142/300 (47%), Gaps = 16/300 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA----GAG 105
AG HS+A+ S V S+G GQLGHG E+ RP P L G + A+ GA
Sbjct: 27 AGANHSVALLSSKAVCSWGRGEDGQLGHGDAED--RPVPTL-LSGFDVPGIASVVICGAD 83
Query: 106 RTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T SD Q+Y++G FG +G + V PQ +E+L+ I + Q A G+ +
Sbjct: 84 HTTAYSDEQMQLYSWGWGDFGRLGHG--NSSDVFHPQPIEALQGIKIKQIACGDSHCLAV 141
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G+V+++ + +LG + + P + E + V IAAG + A+
Sbjct: 142 TDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIH-AFEGVCVKMIAAGAEHTAAILEDGD-- 198
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+Y G G G LG G R D P + + + V+VA G H V G + T+G
Sbjct: 199 -LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKM--VLVACGWRHTVTVSSSGDLYTYG 255
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
W +YG LGHG+ E VP ++AL D +A G T V+ DG +Y +G + +G
Sbjct: 256 WSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVG 315
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 10/252 (3%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GN 158
+AGA ++ + + V ++G+ G+ +G + V P L+ + I +
Sbjct: 26 SAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVICGAD 83
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
TA + ++Y++ WG+ RLGH + P P+ L+ I + QIA G + LA+
Sbjct: 84 HTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIE-ALQGIKIKQIACGDSHCLAVT 142
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
V+S G G+LG G+ D P+ I F+ + ++ ++AAGA H A + +DG
Sbjct: 143 ---DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVK--MIAAGAEHTAAILEDG 197
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WGWG+YG LG G+ VP+ V ++ K + VA G T VS GD+Y++G
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWS 257
Query: 339 ESASLGHNAIAD 350
+ LGH D
Sbjct: 258 KYGQLGHGDFED 269
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++AG + +AL S AV S G G G+LGHG D P L+ F + + VV
Sbjct: 22 VALVSAGANHSVALL---SSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV 78
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ A + ++ +WGWG +G LGHGN P+ ++AL +K +A GD
Sbjct: 79 ICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC 138
Query: 324 FVVSEDGDVYSFGCGESASLG 344
V++ G V+S+G ++ LG
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLG 159
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V ++G VY+ GSN GQLG + RP I +L I Q + G +++
Sbjct: 42 GRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHK--RPTVITALDTQSIQQVSCGDYHNLVV 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D QV+++G D G+ + ++ G P++V+ L ++ +VQ A G + LS +GR
Sbjct: 100 NDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGR 159
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ FSWGN++ +LG + N +P L +L IP QI AG + L+ SG AV+
Sbjct: 160 I--FSWGNNSHGQLGIGSTKNQPKPQELT-SLTGIPFCQIVAGGSHSFVLS--KSG-AVF 213
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G D K+P ++ L +L+ ++ G H AV+ DG V T+G G
Sbjct: 214 GFGRNTFGQLGLGDTGDRKYPTHVKS--LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGS 271
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E++P+ V L ++ +A G +T V G +YSFG G + LG
Sbjct: 272 YGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS+A+++ G ++S+G+NS GQLG G+T+ + +P+ + SL GI Q AG
Sbjct: 143 QVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSH 202
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++S +G V+ FG+++FG+ G G + P V+SL+++ V + G TAVL+
Sbjct: 203 SFVLSKSGAVFGFGRNTFGQLGLGDTGDR--KYPTHVKSLRSLKVTHISCGEEHTAVLTL 260
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V TF G+ +LGH++ ++ P + L + V Q+A G + +A + SG +
Sbjct: 261 DGGVLTFGAGSYGQLGHNSNNHEALPRKVF-ELMGLEVTQLACGRMHTMAYV-ESSG-RI 317
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIE 252
YS G G G+LG T+ P ++
Sbjct: 318 YSFGLGGNGQLGSKGTTNCNTPITVD 343
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
Q G H++ V K V+S+G + GQLGH RPR ++ L ++I+Q A G
Sbjct: 88 QVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACG 147
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ +S+ G+++++G +S G + G+ TK PQ + SL I Q G + V
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHG--QLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFV 205
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
LS+ G V+ F +LG + D + + +L ++ V I+ G + L
Sbjct: 206 LSKSGAVFGFGRNTFGQLG-LGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDG-- 262
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCT 282
V + G G G+LGH S E PR + F+L+ L+ +A G H A V GR+ +
Sbjct: 263 -GVLTFGAGSYGQLGHNSNNHEALPRKV--FELMGLEVTQLACGRMHTMAYVESSGRIYS 319
Query: 283 WGWGRYGCLG-HGNEECES 300
+G G G LG G C +
Sbjct: 320 FGLGGNGQLGSKGTTNCNT 338
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 21/292 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
++ +G+ +G+LG G EE+ + +P + + +R + + G T+ + G VY
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMR--EVSCGRQHTVFVLAEGTVYTC 58
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND- 178
G + +G+ + K P ++ +L + Q + G++ V++ + +V FSWG D
Sbjct: 59 GSNDYGQ----LGQDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQV--FSWGYDD 112
Query: 179 -ARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+LGH E N+ ++ L ++ +VQ+A G + LAL+ + ++S G G
Sbjct: 113 CGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALS---NDGRIFSWGNNSHG 169
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG GS ++ P+ E L + + AG H+ V+ + G V +G +G LG G+
Sbjct: 170 QLGIGSTKNQPKPQ--ELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD 227
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P V++L +K H++ G+ T V++ DG V +FG G LGHN+
Sbjct: 228 TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNS 279
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V+ G H V +G V T G YG LG ++ P V+ AL+ V+ GDY
Sbjct: 39 VSCGRQHTVFVLAEGTVYTCGSNDYGQLGQ--DKGHKRPTVITALDTQSIQQVSCGDYHN 96
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VV++ V+S+G + LGH A G
Sbjct: 97 LVVNDKYQVFSWGYDDCGQLGHTLEAGGN 125
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 10/309 (3%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---I 95
A C + Q + G S + S G V + G G+LG G +++ + P I + QG
Sbjct: 3707 APCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVT 3766
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ + G +M +++ G+V+++G FG+ +G + P+ +E+L+ VVQ A
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLA 3824
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +AV++ +G+++TF G RLG + N ++P + LE V Q++ G + L
Sbjct: 3825 CGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPE-RVAALEGYHVGQVSCGLNHTL 3883
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L+ GMAV++ G G GKLG GS T + +P+ +EQ L N V GA + V+
Sbjct: 3884 VLSLD--GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVLA 3939
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V T+G R L + S P+VV +L + +A G +S GD+Y++
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAW 3999
Query: 336 GCGESASLG 344
GC LG
Sbjct: 4000 GCNSEGQLG 4008
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 157/301 (52%), Gaps = 23/301 (7%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-----PIRSLQGIRII 98
++Q I AG + +V++ G V + G S G+LG G + + P+ P R+++ ++
Sbjct: 370 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIK--KVF 427
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ I+ G+V+++G +G+ +G T+ P++V+ L + VV A+ G
Sbjct: 428 SSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIVQGPLFSKIVVSASAG 485
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLA 216
+A ++ +G +YT+ G+ RLGH +D + +++I V Q+A G + +A
Sbjct: 486 YRHSAAVTNDGELYTWGEGDFGRLGH----SDSQSRNTPTLVKDISGVGQVACGSSHTIA 541
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+A G ++S G G GKLGHG P++IE ++ V AG+ + +
Sbjct: 542 VA--QDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTS 597
Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G+V WG G CLG G+ E S+ P+ V+ L+ K I ++ GD +S + +VY++
Sbjct: 598 AGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAW 655
Query: 336 G 336
G
Sbjct: 656 G 656
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 19/308 (6%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VY +GSNSS QL GT E+ P+ + + I+A G T +S G V A GK
Sbjct: 339 TVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDGSVKACGKG 396
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARL 181
S+G G + + ++E +NI V ++ G + T ++ +G V+++ G +L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH P + G L + VV +AGY + A+ + +Y+ G G G+LGH
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT---NDGELYTWGEGDFGRLGHSD 513
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECES 300
P L++ + VA G+ H V QDGR ++G G G LGHG+
Sbjct: 514 SQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVY 569
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--------ESASLGHNAIADGQ 352
PKV++AL+ V G ++ ++ G V+++GCG E+ SL + D
Sbjct: 570 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRFVEDLS 629
Query: 353 VCSLLFLS 360
+ ++ +S
Sbjct: 630 ITKIIDIS 637
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS VT+ G +++FGS SG+LG +T + +P + +L+G + Q + G
Sbjct: 3822 QLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNH 3881
Query: 107 TMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+++S D V+AFG +G+ G K PQ VE L N + + G F+ VL+
Sbjct: 3882 TLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYY--PQKVEQLCNKGMKKVCCGAQFSVVLA 3939
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G VYTF L N P ++ +LE + + IA G ++LAL+ S
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQ-VVPSLEGLFIEDIAVGCEHVLALS---STGD 3995
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---AGAWHAAVVGQDGRVC 281
+Y+ GC G+LG G K P LI Q N++ + + AW A ++ +C
Sbjct: 3996 IYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQISAGRCHSSAWTAPSTSKNSALC 4054
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 13/237 (5%)
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
DA VY +G +S + G L+ P+L + + ++A G + T +S +G V
Sbjct: 336 DAVTVYVWGSNSSHQLAEGTLEKILL--PKLTQGFSDAQTIEA--GQYCTFSVSTDGSVK 391
Query: 172 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSV 229
G+ RLG N P L L NI V + G + LA+ V+S
Sbjct: 392 ACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGE---VFSW 448
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLGHG+ +K+P+++ Q L + V +AG H+A V DG + TWG G +G
Sbjct: 449 GDGEYGKLGHGNSATQKYPKIV-QGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFG 507
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGH 345
LGH + + + P +V+ ++ V VA G T V++DG ++SFG G++ LGH
Sbjct: 508 RLGHSDSQSRNTPTLVKDISGVG--QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLIS 111
GH++A+T G V+S+G G+LGHG + + P+ ++ L ++ A+AG + ++
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT 493
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-V 170
+ G++Y +G+ FG G ++ +P LV+ + V Q A G+ T ++++GR +
Sbjct: 494 NDGELYTWGEGDFGR--LGHSDSQSRNTPTLVKDISG--VGQVACGSSHTIAVAQDGRTM 549
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
++F G++ +LGH + N V ++ L + ++ AG LAL S V++ G
Sbjct: 550 WSFGGGDNGKLGH-GDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALT---SAGQVFAWG 605
Query: 231 CGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
CG LG GS T PR +E + + + ++ G H + + V WG G
Sbjct: 606 CG--SCLGCGSSETTSLRPRFVEDLSITKI--IDISCGDSHCLALSHENEVYAWGNNTMG 661
Query: 290 CLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G+ + PK V L V + G
Sbjct: 662 QCGQGHTSTPITRPKKVLGLEGVSIQQITAG 692
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 47 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H+IAV G ++SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 590
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ AGQV+A+G S G G+ TS P+ VE L ++ + G+
Sbjct: 591 SSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 645
Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
LS E VY +WGN+ +G HT P +LG LE + + QI AG + LA
Sbjct: 646 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 701
Query: 220 QPS 222
P+
Sbjct: 702 VPT 704
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRV 280
S AV +VG G G+LG G+ D P +I FQ + +V + G+ H+ + + G V
Sbjct: 3728 SNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEV 3787
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G +G LGHGN E + PK ++AL + +A G + VV+ DG +++FG GES
Sbjct: 3788 FSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGES 3847
Query: 341 ASLGHNAIAD 350
LG + ++
Sbjct: 3848 GRLGQRSTSN 3857
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E C + + G S+ + + G VY+FG L + P+ + SL+G+ I
Sbjct: 3918 EQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3977
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
A G + +S G +YA+G +S E + G+ LV P L+ +L+ + Q + G
Sbjct: 3978 EDIAVGCEHVLALSSTGDIYAWGCNS--EGQLGLGHCNLVKEPTLITALQGKNIKQISAG 4035
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 150/287 (52%), Gaps = 15/287 (5%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++YS+G GQ G+G+T ++ P P+ L+ + ++Q A G+G T+++++ V+++G+
Sbjct: 7 MLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G + K V P LV +L + Q G++ TA +S G ++T+ G +LG
Sbjct: 67 DDGRLGHADNHWKYV--PHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124
Query: 183 HHTEPNDVEPHPLLGTLENI---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
H E HP +E V QIA G + AL +G VY G G G
Sbjct: 125 HGNEVG----HPAPCRVEAFIGREVEQIACGSRHTAALL---AGGEVYCWGDRENGVCGI 177
Query: 240 GSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
G + ++ P+ +E + + + + AA +H A + QDG + +WG G++G LG GNE+
Sbjct: 178 GEAAEHQYLPKKLEALKGVKITQI--AACGFHTAAITQDGALWSWGEGKFGRLGQGNEKN 235
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P V+ L V+ VA G + + V+EDGDV +FG GE LGH
Sbjct: 236 QVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH 282
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 155/317 (48%), Gaps = 19/317 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G GH++ +T V+S+G G+LGH ++ P + +L G I Q G+
Sbjct: 43 QIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYH 102
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ISD G ++ +G +G+ +G + +P VE+ V Q A G+ TA L
Sbjct: 103 TAAISDTGALWTWGGGMYGKLGHGNEVGH--PAPCRVEAFIGREVEQIACGSRHTAALLA 160
Query: 167 EGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G VY + + G H P +E L+ + + QIAA C A
Sbjct: 161 GGEVYCWGDRENGVCGIGEAAEHQYLPKKLE------ALKGVKITQIAA--CGFHTAAIT 212
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
G A++S G G G+LG G+ ++ P +E Q + ++ V A G +H+A V +DG V
Sbjct: 213 QDG-ALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQV--ACGGFHSACVTEDGDV 269
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
T+G G +G LGHG++ +VP +V+AL + V G T +SEDG V++FG G+
Sbjct: 270 LTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329
Query: 341 ASLGHNAIADGQVCSLL 357
LGH A A + L+
Sbjct: 330 GKLGHGANAKSALPKLV 346
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 10/292 (3%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
WK V + A + Q G H+ A++ G ++++G G+LGHG P
Sbjct: 78 WKYVPHLV---SALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAP 134
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ + G + Q A G+ T + G+VY +G G G + + P+ +E+L
Sbjct: 135 CRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIG-EAAEHQYLPKKLEAL 193
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
K + + Q A F TA ++++G ++++ G RLG E N V P + G L+ + V Q
Sbjct: 194 KGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEG-LQGVRVKQ 252
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+A G + AC V + G G G+LGHG +T+ P L++ + + V V
Sbjct: 253 VACGGFHS---ACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGI--VQVTC 307
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
G H + +DG+V T+G G +G LGHG ++PK+V++L ++K VA+
Sbjct: 308 GWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVAS 359
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS VT G V +FG GQLGHG P +++L+G I+Q G
Sbjct: 251 KQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWS 310
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL- 164
T+ +S+ G+V+ FG G+ +G + P+LVESL N+ V + A N T L
Sbjct: 311 HTVTLSEDGKVFTFGNGDHGKLGHGANAKSAL--PKLVESLANMKVAKVASYNEHTVALC 368
Query: 165 --SREGRVYTFSWGNDAR 180
+E V +F + D R
Sbjct: 369 HAEQEQAVMSFDFLKDLR 386
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
D + +WG G G G+G+ + +P V+ L + + +A G T V++ED DV+S+
Sbjct: 4 HDSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63
Query: 336 GCGESASLGH 345
G G+ LGH
Sbjct: 64 GRGDDGRLGH 73
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 17/312 (5%)
Query: 44 ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E S G H+ A + S VYS+G G+LGHG + + + PR I+ L+G+ I Q A
Sbjct: 67 EISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIAC 126
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + I+ G+V+++G++ G+ G+ T+ V P V + + I V A G TA
Sbjct: 127 GDSHCLAITGDGEVHSWGRNQNGQ--LGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTA 184
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALAC 219
++ G++Y + WG LG + + P G + +P + +A G+ + +A+A
Sbjct: 185 AVTESGKLYGWGWGRYGNLGLGDRNDRLVP----GEVAAVPGEKMNLVACGWRHTIAVAN 240
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDG 278
+ +Y+ G G+LGHG D P Q Q L + + +G W H + +DG
Sbjct: 241 SGN---LYTFGWSKYGQLGHGDFEDHLVPH---QVQALKNKTIQAVSGGWRHTVALDEDG 294
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WGW ++G +G GN + + PK++ + + K V G T +++ G+VYS+G G
Sbjct: 295 ELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRG 354
Query: 339 ESASLGHNAIAD 350
S LGH D
Sbjct: 355 TSGQLGHGDAVD 366
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 8/266 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G H +A+T G V+S+G N +GQLG G TE+ P + + +GI + AAG
Sbjct: 120 EIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAG 179
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A T ++++G++Y +G +G G + +LV P V ++ + A G T
Sbjct: 180 AEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLV--PGEVAAVPGEKMNLVACGWRHTIA 237
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ G +YTF W +LGH + + PH + L+N + ++ G+ + +AL
Sbjct: 238 VANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVAL---DED 293
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y G G++G G+ D P+LI ++N + V G H + G V +W
Sbjct: 294 GELYGWGWNKFGQVGCGNTDDHNSPKLIT--GIVNEKVTRVTCGWRHTVAITDRGNVYSW 351
Query: 284 GWGRYGCLGHGNEECESVPKVVQALN 309
G G G LGHG+ VPK ++ L+
Sbjct: 352 GRGTSGQLGHGDAVDRCVPKRIELLS 377
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R+I +AGA T+ + V ++G+ G+ +G + + P ++ +L + +
Sbjct: 15 RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL--PLVISALDDCEISSIT 72
Query: 156 IGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S R VY++ WG+ RLGH + P + G L+ + + QIA G +
Sbjct: 73 CGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHC 131
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ V+S G G+LG G D P + F+ + ++ ++AAGA H A V
Sbjct: 132 LAITGDGE---VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVK--MLAAGAEHTAAV 186
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G++ WGWGRYG LG G+ VP V A+ K VA G T V+ G++Y+
Sbjct: 187 TESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYT 246
Query: 335 FGCGESASLGHNAIAD 350
FG + LGH D
Sbjct: 247 FGWSKYGQLGHGDFED 262
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 158/307 (51%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG+V ++G++ G+ G L+ PQ +++ +++ V A G TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKMVLVACGWRHTITVSDSGN-- 242
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G GN + S P V D K VA G T +SE +V+S+G G S L
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 358
Query: 344 GHNAIAD 350
G+ I D
Sbjct: 359 GNGEIVD 365
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79
Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S D QVY++G FG +G + V +PQ V++L+ + + Q A G+ ++ G
Sbjct: 80 YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + E++ V IAAG + A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E VP V+AL D ++ G T ++ +G +Y +G + +G
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G + L
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 247 GWSKYGQLGHGDFED 261
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ + + + AAGA
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEH 181
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +L+ P+ V S++ +V A G T +S
Sbjct: 182 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSD 239
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH + L++ + QI+ G+ + +AL + +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQISGGWRHTMALTSEGK---L 295
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D P Q Q + A W H + + V +WG
Sbjct: 296 YGWGWNKFGQVGVGNNDDHSSPG---QVSFPEDQKISQVACGWRHTLALSEKKNVFSWGR 352
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG+G + P ++ AL+
Sbjct: 353 GTSGQLGNGEIVDRNTPVLIDALS 376
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 10/304 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQA 100
+ Q + G S + S GVV + G G+LG G +++ + P I + QG +++ +
Sbjct: 3051 QTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTS 3110
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
G +M +++ G+V+++G FG+ +G + P+ +E+L+ VVQ A G
Sbjct: 3111 CGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLACGFRH 3168
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+AV++ +G+++TF G RLG + N + P + LE V Q++ G + L L+
Sbjct: 3169 SAVVTADGKLFTFGSGESGRLGQRSTSNKMLPE-RVAALEGYHVGQVSCGLNHTLVLSLD 3227
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
GMAV++ G G GKLG GS T + +P+ +EQ L N V GA + VV DG V
Sbjct: 3228 --GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVVACDGHV 3283
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
T+G R L + S P+VV +L + +A G +S GDVY++GC
Sbjct: 3284 YTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSE 3343
Query: 341 ASLG 344
LG
Sbjct: 3344 GQLG 3347
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 160/299 (53%), Gaps = 19/299 (6%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAA 101
++Q I AG + +V++ G V + G S G+LG G + + P+ + + I+ + ++
Sbjct: 413 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSS 472
Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
G+ G T+ I+ G+V+++G +G+ +G T+ P++++ L + VV A+ G
Sbjct: 473 KGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIIQGPLFSKIVVSASAGYR 530
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALA 218
+A ++++G +YT+ G+ RLGH +D + + +++I V Q+A G + +A+A
Sbjct: 531 HSAAVTKDGELYTWGEGDFGRLGH----SDSQSRNMPTLVKDISGVGQVACGSSHTIAVA 586
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G V+S G G GKLGHG P++IE ++ V AG+ + + G
Sbjct: 587 --QDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAG 642
Query: 279 RVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+V WG G CLG G+ E S+ P+ V+ L+ K I ++ GD +S + +VY++G
Sbjct: 643 QVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWG 699
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 153/331 (46%), Gaps = 24/331 (7%)
Query: 41 CRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 99
C +S A PG AVT VY +GSNSS QL GT E+ P+ + + I+
Sbjct: 363 CLCSSSTDAASPGTEGDAVT----VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIE 418
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-N 158
A G T +S G V A GK S+G G + + ++E +NI V ++ G +
Sbjct: 419 A--GQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T ++ +G V+++ G +LGH P + G L + VV +AGY + A+
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVT 536
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+Y+ G G G+LGH P L++ + VA G+ H V QDG
Sbjct: 537 ---KDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG----QVACGSSHTIAVAQDG 589
Query: 279 R-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
R V ++G G G LGHG+ PKV++AL+ V G ++ ++ G V+++GC
Sbjct: 590 RTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC 649
Query: 338 G--------ESASLGHNAIADGQVCSLLFLS 360
G E+ SL + D + ++ +S
Sbjct: 650 GSCLGCGSSETTSLRPRFVEDLSITKIIDIS 680
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS VT+ G +++FGS SG+LG +T + P + +L+G + Q + G
Sbjct: 3161 QLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNH 3220
Query: 107 TMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+++S D V+AFG +G+ G K PQ VE L N + + G F+ V++
Sbjct: 3221 TLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYY--PQKVEQLCNKGMKKVCCGAQFSVVVA 3278
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G VYTF L N P ++ +LE + + IA G ++LAL+ S
Sbjct: 3279 CDGHVYTFGQERLIGLPDSMLKNRSNPQ-VVPSLEGLFIEDIAVGCEHVLALS---STGD 3334
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
VY+ GC G+LG G K P LI Q N++ ++AG H++
Sbjct: 3335 VYAWGCNSEGQLGLGHCNPVKEPTLITALQGKNIKQ--ISAGRCHSS 3379
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 24/330 (7%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG E + RP+ I +LQG ++Q A G + +++
Sbjct: 3115 GHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTA 3174
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG G G + T P+ V +L+ V Q + G T VLS +G V+
Sbjct: 3175 DGKLFTFGSGESG--RLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVW 3232
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG + P + L N + ++ G + + +AC VY+ G
Sbjct: 3233 AFGDGDYGKLGAGSSTAKYYPQK-VEQLCNKGMKKVCCGAQFSVVVACDGH---VYTFGQ 3288
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L + +P+++ + L ++ + V G H + G V WG G L
Sbjct: 3289 ERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAV--GCEHVLALSSTGDVYAWGCNSEGQL 3346
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGD-----YTTFVVSED----GDVYSFGCGESAS 342
G G+ P ++ AL ++ G +TT S++ G++ G +S
Sbjct: 3347 GLGHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNL-QLGLPQSVP 3405
Query: 343 LGHNAIADGQVCSLLFLSIFQYLQIWLNLS 372
+N + D CS LS+ L++ N S
Sbjct: 3406 PQYNTLKD---CSPRVLSM--RLRVLYNFS 3430
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 16/281 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
++ S + GH++A+T G V+S+G G+LGHG + + P+ I+ L ++ A+
Sbjct: 467 KKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSAS 526
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + ++ G++Y +G+ FG G ++ P LV+ + V Q A G+ T
Sbjct: 527 AGYRHSAAVTKDGELYTWGEGDFGR--LGHSDSQSRNMPTLVKDISG--VGQVACGSSHT 582
Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
++++GR V++F G++ +LGH + N V ++ L + ++ AG LAL
Sbjct: 583 IAVAQDGRTVWSFGGGDNGKLGH-GDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALT-- 639
Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S V++ GCG LG GS T PR +E + + + ++ G H + +
Sbjct: 640 -SAGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKI--IDISCGDSHCLALSHENE 694
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
V WG G G G+ + PK V L V + G
Sbjct: 695 VYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAG 735
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 47 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H+IAV G V+SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 574 QVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 633
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ AGQV+A+G S G G+ TS P+ VE L ++ + G+
Sbjct: 634 SSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 688
Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
LS E VY +WGN+ +G HT P +LG LE + + QI AG + LA
Sbjct: 689 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 744
Query: 220 QPS 222
P+
Sbjct: 745 VPT 747
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------- 219
G+ + WGN R G L GT N+ V +A + C
Sbjct: 3018 GKSDVYLWGN-GRYGQ-----------LAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLI 3065
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDG 278
Q +G+ V +VG G G+LG G+ D P +I FQ + +V + G+ H+ + + G
Sbjct: 3066 QSNGV-VTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +WG G +G LGHGN E + PK ++AL + +A G + VV+ DG +++FG G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 339 ESASLGHNAIAD 350
ES LG + ++
Sbjct: 3185 ESGRLGQRSTSN 3196
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 21/168 (12%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E C + + G S+ V G VY+FG L + P+ + SL+G+ I
Sbjct: 3257 EQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3316
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAA 155
A G + +S G VYA+G +S E + G+ V P L+ +L KNI + A
Sbjct: 3317 EDIAVGCEHVLALSSTGDVYAWGCNS--EGQLGLGHCNPVKEPTLITALQGKNIKQISA- 3373
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
GR ++ +W + + P +++ LG +++P
Sbjct: 3374 ------------GRCHSSAWTTPSTSKNSGGPGNLQ----LGLPQSVP 3405
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQGI+I Q A G
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGD 128
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG+V ++G++ G+ G L+ PQ +++ + I V A G TA +
Sbjct: 129 SHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQAFEGISVKMIAAGAEHTAAV 186
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + P + ++E +V +A G+ + + ++ S
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKV-SSVEGDKMVLVACGWRHTITVS---SSG 242
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
++Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 243 SLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 299
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G G+ P V + K VA G T +E +V+++G G S L
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQL 359
Query: 344 GHNAIAD 350
GH I D
Sbjct: 360 GHGEIVD 366
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 151/332 (45%), Gaps = 11/332 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + V+ ++G GQLGHG E+ P I I GA T
Sbjct: 21 AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80
Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S D QVY++G FG +G + V +PQ V++L+ I + Q A G+ ++ G
Sbjct: 81 YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ E VP V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312
Query: 349 ADGQVCSLLFLSIFQYLQIWLNLSSYRHLPTF 380
AD CS ++ + ++ +RH F
Sbjct: 313 ADH--CSPAQVNFPEEQKVAQVACGWRHTLAF 342
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +GI + AAGA
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + + V P+ V S++ +V A G T +S
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH + L++ QI+ G+ + +AL S +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q Q V A W H + V WG
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGR 353
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + P ++ AL+
Sbjct: 354 GTSGQLGHGEIVDRNTPVIIDALS 377
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + +G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ V S G G+LG G+ D P+ I+ F+ ++++ ++AAGA H A V
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ VP+ V ++ K + VA G T VS G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 248 GWSKYGQLGHGDFED 262
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L LR ++A CR R + G HS+ + G VY+ G NS
Sbjct: 3 CWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNS 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRVR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGHG+ E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G +S G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + +V A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH ++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHGSMND 281
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ +G ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T G VY++G G+LGHG ++ PR SL G I G+ T +S G ++
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G +G+ +G + ++P+ V+SL + VV A G+ TA+++ G +YT+ +
Sbjct: 83 WGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140
Query: 179 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGK 236
GH TE + P LL L VVQ++A G+ C VY+ G G G+
Sbjct: 141 GVAGHGDTEGHQYTP-KLLERLSGKRVVQLSACGF----HTGCLTDAGEVYTWGEGKFGR 195
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LGHG+ + PRL+E LL +PV ++ G +H+AVV DG++ T+G G +G LGHG++
Sbjct: 196 LGHGAERNCHSPRLVET--LLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK 253
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P +V+ L+ V + G + ++ +VY++G G+ LGH
Sbjct: 254 VNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH 302
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%)
Query: 27 WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
WK V R LAG+ + G H+ AV+SKG ++++G G+LGHG
Sbjct: 46 WKYVPRLTHSLAGQVI-----THVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHS 100
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 143
P+ + SL G+ ++ A G+ T +++ G +Y +G G A +G +G + +P+L+
Sbjct: 101 TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQY--TPKLL 158
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
E L VVQ + F T L+ G VYT+ G RLGH E N P L+ TL
Sbjct: 159 ERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPR-LVETLLGKR 217
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
VQI+ G + + +Y+ G G G+LGHG + ++ P L++ + L +
Sbjct: 218 PVQISCGGFHSAVVTADGK---MYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQIT 274
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G H+ + V TWG G +G LGHG + S P++V+ L K + VA+ + T
Sbjct: 275 --CGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHT 332
Query: 324 FVVSEDGDV 332
+ E V
Sbjct: 333 ACLVEPHSV 341
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+D RLGH P L +L + + G + A++ + + ++
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPR-LTHSLAGQVITHVTCGSYHTAAVSSKGN---LF 81
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+ GKLGHG+ + P+ ++ L+ L V +A G+ H A+V G + TWG
Sbjct: 82 TWGGGMYGKLGHGNESGHSTPKRVDS--LVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139
Query: 288 YGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G GHG+ E + PK+++ L+ + + ++ + T +++ G+VY++G G+ LGH
Sbjct: 140 NGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHG 199
Query: 347 A 347
A
Sbjct: 200 A 200
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS VT+ G +Y+FG GQLGHG + +P ++ L G+ + Q G
Sbjct: 220 QISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSH 279
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ ++ + +VY +G G+ +G K V++PQLVE L VV A N TA L
Sbjct: 280 SVALTSSHEVYTWGNGDHGKLGHGCG--KKVSTPQLVEKLVGQKVVCVASYNEHTACL-- 335
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCY 213
VEPH + + + P +VQI AGY +
Sbjct: 336 -----------------------VEPHSVNASRRHAPGTMVQIGAGYLH 361
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G HS+A+TS VY++G+ G+LGHG ++ P+ + L G +++ A+
Sbjct: 271 TQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNE 330
Query: 106 RTMLISDAGQVYA 118
T + + V A
Sbjct: 331 HTACLVEPHSVNA 343
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 159/334 (47%), Gaps = 15/334 (4%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
K +R L A +Q AG H +A+ S G+VYS+G N GQLG GTT + + P+
Sbjct: 835 KTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQ 894
Query: 88 PIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE---YGVQGTKLVTSPQL 142
P++ Q + +Q +AG + I +VY +G +S G+ + Y +
Sbjct: 895 PVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADP 954
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLEN 201
+ + VQ ++ F L +G VYT+ + + +LG+ T + +P ++
Sbjct: 955 DNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQS 1014
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--NL 259
QI+AG + LA+ + ++ G G+LG GS +D+ P+ ++ +L
Sbjct: 1015 FQASQISAGSWHALAIDTDGN---TWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL 1071
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----ALNDVKAIH 315
+ ++AG H+ VV +DG + WGW G LG GN ++ P ++ KA+
Sbjct: 1072 KATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVR 1131
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+ G + + +DG+++++G + LG+N A
Sbjct: 1132 SSAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTA 1165
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 21/314 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQGIRIIQA 100
Q AG SI V S G Y++G+N GQL + + P+R + Q
Sbjct: 796 QVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQV 855
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AAG + I G VY++G++ G+ G + P + VQ + G
Sbjct: 856 AAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVAD 915
Query: 161 TAVLSREGRVYTFSWGNDAR-LGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYL 214
+A + E RVYT WG+++ G + +P + P VQ++ + ++
Sbjct: 916 SAAIDSENRVYT--WGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFV 973
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL + VY+ G G+LG+G+ + + + Q ++AG+WHA +
Sbjct: 974 MALDADGN---VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAI 1030
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDG 330
DG TWG+ YG LG G+ + P+ VQ D +KA ++ G + VV DG
Sbjct: 1031 DTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDG 1090
Query: 331 DVYSFGCGESASLG 344
++++G + LG
Sbjct: 1091 SLWAWGWNSNGQLG 1104
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 33/326 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAA 101
SQ AG GH +AV S G +YS+GSN GQLG GTT E P P++ QG+ +QA+
Sbjct: 237 SQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQAS 296
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIG 157
AG ++ + G++Y++G +++G + G T +P+ V +N Q A+G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYG--QLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354
Query: 158 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLL------GTLENIPVVQIAA 209
+ L +G +Y SWG++ +LG T E H + G Q++
Sbjct: 355 SLHALGLGSDGNLY--SWGDNDHNQLGDGTT---TERHAPIQVKMPSGVPSGFAWKQMSG 409
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLL--NLQPVVVAA 266
+ LAL S +Y G G++G GS TD K P I Q + N
Sbjct: 410 WGWHSLALG---SDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQM 466
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV----KAIHVATGDYT 322
G +++ +G DG + TWG+G G +G+G+ P N V V+
Sbjct: 467 GDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVA 526
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAI 348
+ + DG++YS+G + LG N
Sbjct: 527 SLAIGSDGNLYSWGANNNGQLGDNTT 552
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 56/319 (17%)
Query: 58 VTSKGVVYSFGS---NSSGQLGHGTTEEEWRPRPIRSL--------------QGIRIIQA 100
+ S V Y F N H T + W P++ +GIR Q
Sbjct: 180 IGSTPVAYDFNQPVINDMNLTAHWTKADAWSMSPVQGPVAGGTKVTLTPPGPRGIRFSQV 239
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTSPQLVESLKNIFVVQAAI 156
+AG G + ++ G +Y++G + G+ G + V PQ V ++ VQA+
Sbjct: 240 SAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--QDFTWVQASA 297
Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV----VQIAAG 210
G F+ L +G++Y SWG++ +LG++T P P + +N P Q A G
Sbjct: 298 GYLFSVGLGSDGKLY--SWGDNTYGQLGNNTTTAHYTPEP-VNLPQNAPSGFTWKQEAVG 354
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--- 267
+ L L S +YS G +LG G+ T+ P ++ P V +G
Sbjct: 355 SLHALGLG---SDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-------MPSGVPSGFAW 404
Query: 268 ------AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAI----HV 316
WH+ +G D + WG G +G G+ + + P + V +
Sbjct: 405 KQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQF 464
Query: 317 ATGDYTTFVVSEDGDVYSF 335
GDY + + DG++Y++
Sbjct: 465 QMGDYYSQAIGSDGNIYTW 483
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 22/276 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAA 102
Q G H++ + S G +YS+G N QLG GTT E P ++ G+ Q +
Sbjct: 350 QEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSG 409
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKL----VTSPQLVESLKNIFVVQAAIG 157
++ + +Y +G ++ GE G + K+ + +PQ V S N Q +G
Sbjct: 410 WGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPS--NFTWGQFQMG 467
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYL 214
++++ + +G +YT+ +G + +G+ + + P H G L N Q++
Sbjct: 468 DYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVAS 527
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWHAA 272
LA+ S +YS G G+LG + T P + Q L V +AG W
Sbjct: 528 LAIG---SDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQASAG-WDNN 583
Query: 273 VVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
G DG + +WG G LG +P V
Sbjct: 584 SFGLASDGNLYSWGKNANGQLGDNTTNDRHIPGRVN 619
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 139/334 (41%), Gaps = 40/334 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAA 102
QA AG S+ + S G +YS+G N+ GQLG+ TT + P P+ Q G Q A
Sbjct: 294 QASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAV 353
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKNIFVVQAAIG-N 158
G+ + + G +Y++G + + G T +P ++ + + F + G
Sbjct: 354 GSLHALGLGSDGNLYSWGDNDHNQLGDGT--TTERHAPIQVKMPSGVPSGFAWKQMSGWG 411
Query: 159 FFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLL---GTLENIPVVQIAAGY 211
+ + L + +Y WG + R G T+ N + P + G N Q G
Sbjct: 412 WHSLALGSDNWIY--GWGANTRGEVGTGSITD-NKITPVRIATPQGVPSNFTWGQFQMGD 468
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR-------LIEQFQLLNLQPVVV 264
Y A+ S +Y+ G G G +G+GS D P ++ F + + V
Sbjct: 469 YYSQAIG---SDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSV 525
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA----IHVATG- 319
A+ A +G DG + +WG G LG + P V A + + + G
Sbjct: 526 ASLA-----IGSDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQASAGW 580
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
D +F ++ DG++YS+G + LG N D +
Sbjct: 581 DNNSFGLASDGNLYSWGKNANGQLGDNTTNDRHI 614
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 156/307 (50%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 69 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 128
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AGQV ++G++ G+ G L+ PQ +++ + + V A G TA +
Sbjct: 129 SHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGVCVKMIAAGAEHTAAV 186
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 187 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKMVLVACGWRHTITVSDSGN-- 243
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 244 -LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQI---SGGWRHTMALTSEGKLYGW 299
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G GN + P V D K VA G T +SE +V+S+G G S L
Sbjct: 300 GWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 359
Query: 344 GHNAIAD 350
G+ I D
Sbjct: 360 GNGEIVD 366
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +G+ + AAGA
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +L+ P+ V S++ +V A G T +S
Sbjct: 183 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSD 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L++ + QI+ G+ + +AL + +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDSTISQISGGWRHTMALTSEGK---L 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D P Q Q + A W H + + V +WG
Sbjct: 297 YGWGWNKFGQVGVGNNDDHCSPV---QVHFPEDQKISQVACGWRHTLALSEKKNVFSWGR 353
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG+G + P ++ AL+
Sbjct: 354 GTSGQLGNGEIVDRNTPVLIDALS 377
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 130/257 (50%), Gaps = 13/257 (5%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPGITSVIC 73
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCY 213
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G +C
Sbjct: 74 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 132
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+ +A Q V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A
Sbjct: 133 AVTMAGQ-----VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK--MIAAGAEHTAA 185
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V +DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245
Query: 334 SFGCGESASLGHNAIAD 350
++G + LGH D
Sbjct: 246 TYGWSKYGQLGHGDFED 262
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HSI + G VY+ GSN+ GQLGH E +P I +L I+ A
Sbjct: 35 RSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 92
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +SD GQ++++G S G+ + V P+L++ L ++Q + GN+
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ +G+ +T+ +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRV-KSLEGIPLAQVAAGGAHSFALSL-- 208
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
SG AV+ G G+LG TD + P + +LL Q VV ++ G H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
T+G G +G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 340 SASLG 344
LG
Sbjct: 325 RGQLG 329
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLGH TTE+ PR I+ L I+Q + G M
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++ G+ G + SPQ V+SL+ I + Q A G + LS G
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 127/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 92
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LGH T + V L+ L ++Q++ G + +A
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ ++ + + L VAAG H+ +
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 268 GAGSFGQLGHDSMND 282
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+VT PQ + + + + A G + L +G VYT +LGH E N E
Sbjct: 22 IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQ--- 78
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
+G L + +V +A G + LAL+ Q ++S G G G+LGH + D PRLI++
Sbjct: 79 IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
LN Q ++ V+ G WH + DG+ TWG R+G LG G E ++ P+ V++L +
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G +F +S G V+ +G + LG + D Q
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG + P ++ L+ +++ + G
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG SFG+ + ++ +P+ V L V Q A G T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 21/307 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+I V G ++SFG N GQLGH + R P+ L+ I Q A GA T+
Sbjct: 42 GENHTILVMKDGKLFSFGLNDYGQLGHCRSRT--RAEPVDGLEAHNITQVACGAQHTLAQ 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G+V+A+G +S G+ V+ + ++ +P++V+SL VVQ A G + L+ G +
Sbjct: 100 NEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEI 158
Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
Y WG+++ LG P E P L+ L+ IP+ I+ G + + A PSG A
Sbjct: 159 Y--CWGSNSHGQLGLGSSGTP---ETKPCLVKLLQGIPISHISCGADF--SFAVTPSG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
VY G G+LG G TD P Q + L Q V + G H A + +DG V T+G
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQP---TQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFG 267
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASL 343
G YG LGH E +P+ V L + G +T V G +Y+FG G S L
Sbjct: 268 AGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQL 327
Query: 344 GHNAIAD 350
G + A+
Sbjct: 328 GTKSTAN 334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+T+ G +Y +GSNS GQLG G++ E +P ++ LQGI I + GA
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGAD 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G VY +GK+SFG + G+ T P ++SL+ V G TA L+
Sbjct: 201 FSFAVTPSGAVYGWGKNSFG--QLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
R+G V+TF G +LGH T N++ P +L L V QI G C+ LA PS
Sbjct: 259 RDGGVFTFGAGMYGQLGHCTSANEMLPRKVL-ELMGTTVTQICCGRCHTLAFV--PSKGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
+Y+ G G G+LG S + P+L+
Sbjct: 316 IYAFGLGGSGQLGTKSTANVNSPQLV 341
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAG 103
+Q G H++A G V+++GSNS+GQLG EE P P ++SL +++Q A G
Sbjct: 87 TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLN-VEESMMPTPKMVKSLATKQVVQIACG 145
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M +++ G++Y +G +S G+ G GT T P LV+ L+ I + + G F+
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTP-ETKPCLVKLLQGIPISHISCGADFSFA 204
Query: 164 LSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 218
++ G VY WG ++ LG T+ P P L +L V I G + AL
Sbjct: 205 VTPSGAVY--GWGKNSFGQLGLGDTTD----RPQPTQLKSLRFQRVTYIRCGMDHTAALT 258
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQD 277
V++ G G+ G+LGH + +E PR + +L+ + G H A V
Sbjct: 259 ---RDGGVFTFGAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAFVPSK 313
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVV--------QALNDVKAIHVATGDYTTFVVSED 329
GR+ +G G G LG + + P++V ++ DVK + T + + + S+
Sbjct: 314 GRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKR 373
Query: 330 GDVYSFGCGESASL 343
V + CG S
Sbjct: 374 VVVRNIFCGGDQSF 387
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I+Q G T+L+ G++++FG + +G+ + T+ + V+ L+ + Q A
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTR----AEPVDGLEAHNITQVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G T + G V+ + ++ +LG + E + + ++ +L VVQIA G + +A
Sbjct: 92 GAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L + +Y G G+LG GS T E P L++ Q + + + + GA + V
Sbjct: 152 LT---NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHI--SCGADFSFAVT 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG +G LG G+ P +++L + ++ G T ++ DG V++F
Sbjct: 207 PSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTF 266
Query: 336 GCGESASLGH 345
G G LGH
Sbjct: 267 GAGMYGQLGH 276
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 153/326 (46%), Gaps = 27/326 (8%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQGI 95
E ++ + AG S+A+T G VYS+G N G LGH + +P I L G
Sbjct: 77 EVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGK 136
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGE---AEYGVQGTKLVTS------------- 139
+I Q + G +++ G+VY +G FG+ E Q K+
Sbjct: 137 KIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSM 196
Query: 140 -PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
PQ +ESL NI Q A G FT VLS +G+VYTF + LG+ ++ N V L+
Sbjct: 197 LPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKD 256
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L +I V+I+AGY + A+ Q +Y+ G G+LG+ + P ++ F N
Sbjct: 257 LNDI--VKISAGYSFCAAITKQGK---LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN 311
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V V+ G A + Q G++ TWG+G G LGHGN+ P+ V+ K I +A
Sbjct: 312 -SIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ--KIIKIAC 368
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLG 344
G ++ED +Y FG G LG
Sbjct: 369 GGSHAAFITEDNQLYQFGRGSEGQLG 394
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 44/321 (13%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------------ 85
E ++ Q G H AVT G VY++G+ G+LGH EEE +
Sbjct: 131 EKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGH---EEELKQEQKIKIKRGNL 187
Query: 86 ----------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
P+ I SL I+ Q A G T+++S+ G+VY FG + +G Y V
Sbjct: 188 SHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY-VSDQN 246
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPH 193
VT+PQL++ L +I V+ + G F A ++++G++YT WGN + +LG+ +P
Sbjct: 247 SVTTPQLIKDLNDI--VKISAGYSFCAAITKQGKLYT--WGNNRNGQLGNSQSLYQTKPS 302
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ G +V ++ G ++ AL Q +Y+ G G G+LGHG+++D PR +E
Sbjct: 303 IVTGFGSQNSIVDVSCGDNFIAALTQQGQ---LYTWGFGGDGQLGHGNKSDLYAPRHVEF 359
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-----ECESVPKVVQAL 308
Q + + +A G HAA + +D ++ +G G G LG G S P +VQ
Sbjct: 360 KQKI----IKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYF 415
Query: 309 NDVKAIHVATGDYTTFVVSED 329
+ + V G T ++++
Sbjct: 416 KGKQVVDVTCGGEHTIAITQE 436
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 31/310 (10%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+VYS+G GQLG + P I L +I + AG +M ++ G+VY++GK+
Sbjct: 50 IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--AR 180
G + + + +T P+ +E L + Q + G F A ++ +G VYT WGN +
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYT--WGNKEFGK 167
Query: 181 LGHHTEPNDVEPHPL------------------LGTLENIPVVQIAAGYCYLLALACQPS 222
LGH E + + + +L NI Q+A G + + L+
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS---E 224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
VY+ G G LG+ S + P+LI+ + V ++AG A + + G++
Sbjct: 225 DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI----VKISAGYSFCAAITKQGKLY 280
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGES 340
TWG R G LG+ ++ P +V +I V+ GD +++ G +Y++G G
Sbjct: 281 TWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGD 340
Query: 341 ASLGHNAIAD 350
LGH +D
Sbjct: 341 GQLGHGNKSD 350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
F+ Q+ + N + + VY++ +G +LG E N P + L + + ++ A
Sbjct: 36 FIYQSILANEYPETI-----VYSWGYGGFGQLGLQNENNYYTPTEIE-VLTDKKIKKVEA 89
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAG 267
G +AL VYS G GG LGH R + P IE+ LL + ++ G
Sbjct: 90 GKSISMALTHNGE---VYSWGKNKGGILGHEDRLSFNMTQPERIEK--LLGKKIKQISCG 144
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-------------------ECESVPKVVQAL 308
+H A V +DG V TWG +G LGH E + +P+ +++L
Sbjct: 145 QFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESL 204
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++KA VA G T V+SEDG VY+FG + SLG+
Sbjct: 205 GNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY 241
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G+ Y LA + VYS G G G+LG + + P IE L + + V AG
Sbjct: 33 AGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIE--VLTDKKIKKVEAG 90
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFV 325
+ + +G V +WG + G LGH + ++ P+ ++ L K ++ G +
Sbjct: 91 KSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAA 150
Query: 326 VSEDGDVYSFGCGESASLGH 345
V+EDG+VY++G E LGH
Sbjct: 151 VTEDGEVYTWGNKEFGKLGH 170
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+ + G VY+ GSNS GQLGH + P + +L +I + G G +M +
Sbjct: 41 GGQHSVFLMHDGSVYTCGSNSCGQLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAV 98
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ GQ++A+G G+ G T V P+LV+ L + + Q GN LSR+G++
Sbjct: 99 NEQGQLFAWGAGDGGQLGLGTTETT-VRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQL 157
Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+T+ +LG EP+ + PHPL +L IP+ QI AG + AL+ SG AV+
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHPL-KSLAGIPLAQITAGGDHSFALSL--SG-AVFGW 213
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG + D P I + L Q VV ++ G H A + +DG + T+G G +
Sbjct: 214 GKNRAGQLGLNDKQDRAVPCHI---KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSW 270
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHNA 347
G LGHG+ E +P+ V L + +A G + T V G VY+FGC LG
Sbjct: 271 GQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGI 330
Query: 348 IADGQ 352
+ D +
Sbjct: 331 LGDAR 335
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 12/242 (4%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EE 83
G+ + +R + C SQ + G H +A++ G ++++G N+SGQLG G E +
Sbjct: 118 GTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSK 177
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P P++SL GI + Q AG + +S +G V+ +GK+ G + G+ + P +
Sbjct: 178 LFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAG--QLGLNDKQDRAVPCHI 235
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ L++ VV + G+ TA L+++G ++TF G+ +LGH + +++ P +L L
Sbjct: 236 KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTE 294
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI------EQFQLL 257
V QIA G + LA PS VY+ GC G+LG G D + P + E F+++
Sbjct: 295 VSQIACGRHHTLAFV--PSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVI 352
Query: 258 NL 259
N+
Sbjct: 353 NI 354
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 15/283 (5%)
Query: 67 FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
+G+ GQLG G + + PR G + + G ++ + G VY G +S G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ + G SP++V +L + + G + ++ +G+++ + G+ +LG T
Sbjct: 64 QLGHDKAGI----SPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGT 119
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
V L+ L + + Q+ G + +AL+ +++ G G+LG G
Sbjct: 120 TETTVRIPRLVKRLCDHRISQVMCGNQHCVALS---RDGQLFTWGQNTSGQLGLGKGEPS 176
Query: 246 K---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
K HP L + + AG H+ + G V WG R G LG +++ +VP
Sbjct: 177 KLFPHPLK----SLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ L K ++++ GD T +++DG +++FG G LGH
Sbjct: 233 CHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGH 275
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 162/298 (54%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT G +++FG+N GQLG G+ + +P +++L+ +I AAG T+ +
Sbjct: 43 GDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAV 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D+ ++Y+FG+ S G +G + + P +ESL++ V A G + +A +++ G +
Sbjct: 103 TDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITKNGEL 160
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y + ++ +LG ND +P + L V+ +A GY + + +Y+ G
Sbjct: 161 YIWGSNSEGQLGL---KNDTISYPTMLDL-GKSVISVACGYYHTAVVTADGK---LYTFG 213
Query: 231 CGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
GGKLG G K P++++ ++ + V VA G H + G+V T+G G+
Sbjct: 214 ETEGGKLGLGDIEAHKVTKPKVVKG---ISGKVVKVACGGNHTVALTASGQVYTFGSGQN 270
Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G++ +S +PK+V+AL+ K H+A G+ T VVS+ G++++FG G LG
Sbjct: 271 GQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQ 328
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 21/315 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AVT +YSFG S G LGHG + P I SL+ + A G +
Sbjct: 94 AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAA 153
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ G++Y +G +S E + G++ ++ P +++ K++ V A G + TAV++ +G+
Sbjct: 154 ITKNGELYIWGSNS--EGQLGLKND-TISYPTMLDLGKSVISV--ACGYYHTAVVTADGK 208
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENI--PVVQIAAGYCYLLALACQPSGMA 225
+YTF +LG D+E H + ++ I VV++A G + +AL SG
Sbjct: 209 LYTFGETEGGKLG----LGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTA--SGQ- 261
Query: 226 VYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VY+ G G G+LG GS+ D P+L+E ++ +A G H AVV G + T+G
Sbjct: 262 VYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKH--IACGESHTAVVSDKGELFTFG 319
Query: 285 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
GR+G LG G+E ++ P VQ L + +H+A G T V D + G ++ S
Sbjct: 320 DGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNES 379
Query: 343 LGHNAIADGQVCSLL 357
++ + G+ +L
Sbjct: 380 SSNDEVDFGKTKLML 394
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I + G V+ FGK FG+ T+ + S K V A G+ T V++ GR
Sbjct: 8 IPETGAVFTFGKSRFGDNR---------TNKFWIRSDK---VTDIACGDEHTVVVTENGR 55
Query: 170 VYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
++TF WG +LG + +P + L+ + +AAG + LA+ +
Sbjct: 56 LFTFGNNEWG---QLGIGSNKTRNKP-TTVKALKPEKITHVAAGRFHTLAVT---DSNKL 108
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
YS G G G LGHG TD P IE + ++ ++A G +H+A + ++G + WG
Sbjct: 109 YSFGQGSEGALGHGDETDLNMPTSIESLEDKDVN--IIACGGYHSAAITKNGELYIWGSN 166
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG N+ S P ++ V I VA G Y T VV+ DG +Y+FG E LG
Sbjct: 167 SEGQLGLKNDTI-SYPTMLDLGKSV--ISVACGYYHTAVVTADGKLYTFGETEGGKLG 221
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+A G H VV ++GR+ T+G +G LG G+ + + P V+AL K HVA G + T
Sbjct: 40 IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHT 99
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
V++ +YSFG G +LGH D
Sbjct: 100 LAVTDSNKLYSFGQGSEGALGHGDETD 126
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VY+ G
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 3992 GAAGR--LGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P L+ L I +V IA G + A+ S +Y+ G G G+LGH
Sbjct: 4050 KLGHGNRLSYDRPK-LVEDLLGIEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4105
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4106 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4165
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + I V G + ++ G VY++G G+ LGH
Sbjct: 4166 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4211
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT+ G VYS G ++G+LG G T+ P + S+Q + I + A +G + +S G
Sbjct: 3979 AVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY++G+ G+ +G + + P+LVE L I +V A G +A ++ G +YT+
Sbjct: 4039 HVYSWGEGDDGKLGHGNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWG 4096
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + + P ++ L++ V+ +A G L C V+S G G
Sbjct: 4097 KGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGDY 4154
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P I+ L L + V G+ + + + G V TWG G Y LGHG
Sbjct: 4155 GKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
++ P+ V AL K I +ATG S+ G+V+++G + LG DG
Sbjct: 4213 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-----DGTTS 4267
Query: 355 SLLFLSIFQYLQ 366
+L + LQ
Sbjct: 4268 ALQRPRLVHALQ 4279
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG ++ + S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGK 3048
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G T + P+L+ESLK+ + A G+ +A ++
Sbjct: 3049 HALALTQDGKVFSWGEGEDGKLGHGNCTT--LDKPRLIESLKSKRIRDIACGSGHSAAIA 3106
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ L VVQ+A G ++ G
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPK-LVQALSGQRVVQVACGSRDAQTMSLTADG-C 3164
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VY+ G G GKLG G P L+++ L + V V GA + + + G V TWG
Sbjct: 3165 VYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3222
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3223 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3282
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR I SL+ RI A G+G +
Sbjct: 3045 SGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAA 3104
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ G++Y +G +G +G T++ P+LV++L VVQ A G + T L+ +
Sbjct: 3105 IASNGELYTWGLGEYGRLGHGDTATQM--KPKLVQALSGQRVVQVACGSRDAQTMSLTAD 3162
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+ +LG P L+ L + VVQ+ G + LAL V+
Sbjct: 3163 GCVYTWGDGDFGKLGRGGSDGCYTPL-LVDRLNGLGVVQVECGAQFSLALT---KYGEVW 3218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3219 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDND 3276
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L+D + V+ G
Sbjct: 3277 HGQQGNGTTIVNRKPSLVHELDDTRMNRVSCG 3308
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ + L GI I+ A G +
Sbjct: 4026 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAA 4085
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4086 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4143
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+++ G+ +LG +D PL + +L + V+++ G + +AL SG AV
Sbjct: 4144 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4198
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4199 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4256
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4257 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4297
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 15/247 (6%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E L + + A G+ ++S+EG++Y
Sbjct: 2953 VYVWGLNDKDQLG----GLKGSK-IKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYA 3007
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + RLG + N EP L+ L + ++A ALA G V+S G G
Sbjct: 3008 CGEGTNGRLGLGDDYNMCEPK-LIPFLSQYVIKKVAVHSGGKHALALTQDG-KVFSWGEG 3065
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLGHG+ T PRLIE + ++ + A G+ H+A + +G + TWG G YG LG
Sbjct: 3066 EDGKLGHGNCTTLDKPRLIESLKSKRIRDI--ACGSGHSAAIASNGELYTWGLGEYGRLG 3123
Query: 293 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG+ + PK+VQAL+ + + VA G D T ++ DG VY++G G+ LG +D
Sbjct: 3124 HGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG-SD 3182
Query: 351 GQVCSLL 357
G LL
Sbjct: 3183 GCYTPLL 3189
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + + +I + + + ++ G VY++G G +G + P+L+E+L
Sbjct: 505 SDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH--DEPKLIETLLEKN 562
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
++ A G+ ++A LS G +YT+ GN RLGH + +DV L+ TL+ VV +A G
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSN-DDVTVPTLVTTLKGHMVVHVACG 621
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L SG+ V+S G G GKLG G K P+++++ LL++ V V G
Sbjct: 622 SGDSQTLCVTASGI-VFSWGDGDYGKLGRGGSDGSKTPKIVDK--LLDINVVRVFCGGQF 678
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A + G V TWG G LGHGNEE PK++++L D K ++ G ++ED
Sbjct: 679 SAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQ 738
Query: 331 DVYSFG 336
VY +G
Sbjct: 739 FVYGWG 744
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T G VYS+G+ G+LGHG P+ I +L II A G+ + +S +
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSAS 579
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G VT P LV +LK VV A G+ + L F
Sbjct: 580 GELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L +I VV++ G + AL + VY+ G
Sbjct: 638 SWGDGDYGKLGRGGSDGSKTPK-IVDKLLDINVVRVFCGGQFSAALTARGE---VYTWGK 693
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHG+ ++P+LIE + ++ + V G H + +D V WG YG +
Sbjct: 694 GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSV--GGTHILALTEDQFVYGWGRNDYGQI 751
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
S P + L+ I +A+G +F
Sbjct: 752 DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSF 784
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 140 PQLVESLKN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
PQ + S + + + G + A L+++G VY++ G+ RLGH + EP L+
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLA-LTQDGCVYSWGNGDGGRLGHGDNISHDEPK-LI 555
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
TL ++ IA G Y AL+ SG +Y+ G G G+LGHGS D P L+ +
Sbjct: 556 ETLLEKNIIFIACGSTYSAALSA--SG-ELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG 612
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
+ V +G V G V +WG G YG LG G + PK+V L D+ + V
Sbjct: 613 HMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRV 672
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G + ++ G+VY++G G++ LGH
Sbjct: 673 FCGGQFSAALTARGEVYTWGKGDAYRLGH 701
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 99/170 (58%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+++ G +Y++G + G+LGHG+ ++ P + +L+G ++ A G+G +T+
Sbjct: 569 GSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL 628
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ +G V+++G +G + G G+ +P++V+ L +I VV+ G F+A L+ G
Sbjct: 629 CVTASGIVFSWGDGDYG--KLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ G+ RLGH E + P L+ +L + + ++ G ++LAL
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPK-LIESLRDKKIKDLSVGGTHILALT 735
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG P P +L + +Q+A G L A+
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPC-ESLSALRPIQLAGGEQTLFAVTAD 3983
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
VYS G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3984 GK---VYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+V+ L ++ + +A G + + ++ G +Y++G G
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4101 GRLGHGDSDD 4110
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G ++ P+ + L I +++ G +
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAA 681
Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +GK G+A G + V P+L+ESL++ + ++G L+ +
Sbjct: 682 LTARGEVYTWGK---GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQ 738
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 739 FVYGWGRNDYGQIDPTLGPVVSEPS-LCPTLSSKNVIGLASG 779
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +I+ A GA
Sbjct: 3200 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALH 3259
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L + + + + G+
Sbjct: 3260 CLAVTDTGQVYAWGDNDHGQQGNGT--TIVNRKPSLVHELDDTRMNRVSCGS 3309
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
+GS T ++P+ + F + + + H + QDG V +WG G G LGHG+
Sbjct: 491 YGSET--QYPQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNIS 548
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
PK+++ L + I +A G + +S G++Y++G G LGH + D V +L+
Sbjct: 549 HDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLV 607
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4236 TGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLA 4295
Query: 110 ISDA 113
S A
Sbjct: 4296 WSTA 4299
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
E P ++IA C + C+ G+ V +G K ++ L +++L
Sbjct: 2883 EYYPCIEIAIKQCRNGGIDCKIHGLRV------VGRKRIFENQLTTSVSFLASDWEVLQE 2936
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
Q V A + A Q V WG LG +P + L+ +K IH+A G
Sbjct: 2937 Q--VTAQRSTDAP--PQQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGG 2992
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
T F+VS++G +Y+ G G + LG
Sbjct: 2993 SKTLFIVSQEGKLYACGEGTNGRLG 3017
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P + L R+ + + G+ ++
Sbjct: 3256 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSI 3313
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 277 DGRVCTWGWGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG +GWG G LG +P ++L+ ++ I +A G+ T F V+ DG VYS
Sbjct: 3929 DGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3988
Query: 335 FGCGESASLGHNAIADGQVCSLL 357
G G + LG V +LL
Sbjct: 3989 TGYGAAGRLGIGGTDSVMVPTLL 4011
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VY+ G
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 4002
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 4003 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + + P L+ L + ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 4061 KLGHGNKMSYDRPK-LIEDLLGVEIIDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4116
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4117 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + I V G + ++ G VY++G G+ LGH
Sbjct: 4177 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4222
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 9/312 (2%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 105
IAG ++ + S+ G +Y+ G ++G+LG G P+PI L I + A +G
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGK 3058
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + + P+L+E+LK+ + A G+ +A ++
Sbjct: 3059 HALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACGSGHSAAIA 3116
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH P L+ TL VVQ+A G +A G
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPK-LVQTLVGHRVVQVACGSRDAQTMALTTDG-C 3174
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P ++E+ L + V V GA + + + G V TWG
Sbjct: 3175 VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3232
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3233 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3292
Query: 346 NAIADGQVCSLL 357
+ + SL+
Sbjct: 3293 GTTSVNRKPSLV 3304
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT+ G VYS G ++G+LG G T+ P + S+Q + I + A +G + +S G
Sbjct: 3990 AVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY++G+ G+ +G + + P+L+E L + ++ A G +A ++ G +YT+
Sbjct: 4050 HVYSWGEGDDGKLGHGNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWG 4107
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + + P ++ L++ V+ +A G L C V+S G G
Sbjct: 4108 KGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGDY 4165
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P I+ L L + V G+ + + + G V TWG G Y LGHG
Sbjct: 4166 GKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
++ P+ V AL K I +ATG S+ G+V+++G + LG DG
Sbjct: 4224 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-----DGTTS 4278
Query: 355 SLLFLSIFQYLQ 366
+L + LQ
Sbjct: 4279 ALHRPRLVHALQ 4290
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G+ II A G +
Sbjct: 4037 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAA 4096
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4097 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4154
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+++ G+ +LG +D PL + +L + V+++ G + +AL SG AV
Sbjct: 4155 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4209
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4210 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4267
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4268 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4308
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ +I + + + ++ G VY++G G +G T P+L+E+L +V
Sbjct: 509 VTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHG--DTVSYDEPKLIEALLEKNIVFI 566
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G+ ++A LS G +YT+ GN RLGH +DV L+ TL+ VV +A G
Sbjct: 567 ACGSTYSAALSVSGELYTWGRGNYGRLGHGNF-DDVMIPTLVTTLKGHTVVHVACGSGDS 625
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L SG+ V+S G G GKLG G K P+++++ LL++ V V G+ +A +
Sbjct: 626 QTLCVTASGI-VFSWGDGDYGKLGRGGTDGSKTPKIVDK--LLDINVVKVFCGSQFSAAL 682
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V TWG G LGHG+EE PK++++L D K ++ G V++ED VY
Sbjct: 683 TAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYG 742
Query: 335 FG 336
+G
Sbjct: 743 WG 744
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I +L+ RI A G+G +
Sbjct: 3055 SGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ G++Y +G +G +G T+ P+LV++L VVQ A G + T L+ +
Sbjct: 3115 IASNGELYTWGLGEYGRLGHGDTVTQ--ARPKLVQTLVGHRVVQVACGSRDAQTMALTTD 3172
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P ++ L + VVQ+ G + LAL V+
Sbjct: 3173 GCVYSWGDGDFGKLGRGGSDGCYTPL-VVERLNGLGVVQVECGAQFSLALT---KYGEVW 3228
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3229 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDND 3286
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L D + V+ G
Sbjct: 3287 HGQQGNGTTSVNRKPSLVHELEDARVNRVSCG 3318
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T G VYS+G+ G+LGHG T P+ I +L I+ A G+ + +S +
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVS 579
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G ++ P LV +LK VV A G+ + L F
Sbjct: 580 GELYTWGRGNYGRLGHGNFDDVMI--PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 637
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 693
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHGS ++P++IE + ++ + V GA H V+ +D V WG YG +
Sbjct: 694 GDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSV--GATHILVLTEDQFVYGWGRNDYGQI 751
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
S P + L+ I +A+G +F
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASGPTQSF 784
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 111/241 (46%), Gaps = 20/241 (8%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 164
M++S G VY S E +Y PQ V + V A G A L
Sbjct: 478 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKLVTMIASHSDGKHHLA-L 524
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+++G VY++ G+ RLGH + EP + LE +V IA G Y AL+ SG
Sbjct: 525 TQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEK-NIVFIACGSTYSAALSV--SG- 580
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+Y+ G G G+LGHG+ D P L+ + + V +G V G V +WG
Sbjct: 581 ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 640
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G YG LG G + PK+V L D+ + V G + ++ G+VY++G G++ LG
Sbjct: 641 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG 700
Query: 345 H 345
H
Sbjct: 701 H 701
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 98/170 (57%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 569 GSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTL 628
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G+ F+A L+ G
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 686
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ G+ RLGH +E + P ++ +L + + ++ G ++L L
Sbjct: 687 EVYTWGKGDTYRLGHGSEEHVRYPK-IIESLRDKKIKDLSVGATHILVLT 735
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG P P P +L + +Q+A G L A+
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTAD 3994
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
VYS G G G+LG G P L+E Q + ++ V V++G H + +G V
Sbjct: 3995 GK---VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN+ PK+++ L V+ I +A G + + ++ G +Y++G G
Sbjct: 4052 YSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4112 GRLGHGDSDD 4121
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 4/212 (1%)
Query: 134 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
+L TS + S + Q A+ A +E VY + + +LG + + ++
Sbjct: 2927 NQLTTSVSFLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLGG-LKGSKIKLP 2985
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + + IA G L ++ + +Y+ G G G+LG G + P+ I
Sbjct: 2986 VYSEVLSKLKPIHIAGGSKTLFIVSQEGK---LYACGEGTNGRLGLGDDNNVCEPKPIPF 3042
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
++ V V +G HA + QDG+V +WG G G LGHGN PK+++ L +
Sbjct: 3043 LSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRI 3102
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+A G + ++ +G++Y++G GE LGH
Sbjct: 3103 RDIACGSGHSAAIASNGELYTWGLGEYGRLGH 3134
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +I+ A GA
Sbjct: 3210 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALH 3269
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L++ V + + G+
Sbjct: 3270 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHELEDARVNRVSCGS 3319
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G+ +
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 681
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+VY +GK +G + + V P+++ESL++ + ++G VL+ +
Sbjct: 682 LTAHGEVYTWGKGDTYRLGHGSE--EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF 739
Query: 170 VYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VY WG ND T + + L TL + V+ +A+G
Sbjct: 740 VY--GWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASG 779
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 211 YCYLLA------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
YC +A L C + + S+ G + HGS T ++P+ + F + +
Sbjct: 458 YCDAIAELGIKQLCCTERALMILSLN-GNVYNMYHGSET--QYPQRVHGFSDKLVTMIAS 514
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+ H + QDG V +WG G G LGHG+ PK+++AL + + +A G +
Sbjct: 515 HSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSA 574
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+S G++Y++G G LGH D + +L+
Sbjct: 575 ALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLV 607
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4247 TGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4306
Query: 110 ISDA 113
S A
Sbjct: 4307 WSTA 4310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ G S A+T+ G VY++G + +LGHG+ E P+ I SL+ +I + GA
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+++++ VY +G++ +G+ + + +++ P L +L + V+ A G
Sbjct: 731 ILVLTEDQFVYGWGRNDYGQIDPTLGS--VISEPTLCPTLSSKTVIGLASG 779
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P + L+ R+ + + G+ ++
Sbjct: 3266 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSI 3323
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 12/320 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS VT G +Y FGSN GQLG G T+ +P ++ L+ ++ + A G T++
Sbjct: 46 GDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVY 105
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S++G++++FG + G+ + + +L+ P+ +ES+ + + Q A G + + +LS +G V
Sbjct: 106 SESGKLFSFGCNEDGQLGHVDKENELL--PKEIESIPQMEIKQIACGTYHSIILSEDGDV 163
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y + N+ +LG E + P L E VV ++ GY Y AL + + Y+ G
Sbjct: 164 YVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGY-YHTALVTRDGFL--YTFG 217
Query: 231 CGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
GKLG S ++ P+ + N + + V+ GA H + + G WG G
Sbjct: 218 ENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276
Query: 289 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LGHG + E + PK ++ L+ K I V+ G+ T VV+E G V++FG G LG
Sbjct: 277 GQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGE 336
Query: 348 IADGQVCSLLFLSIFQYLQI 367
+ ++LS F Y +
Sbjct: 337 DSFSNSFDPVYLSRFNYFNV 356
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+I + G ++SFG N GQLGH E E P+ I S+ + I Q A G ++++
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIIL 157
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S+ G VY +G ++ G+ G + + P+ ++ K VV + G + TA+++R+G +
Sbjct: 158 SEDGDVYVWGNNNEGQLGLGEEVENSL--PKKLKFKKE--VVSVSCGYYHTALVTRDGFL 213
Query: 171 YTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
YTF +LG + N P + +N + ++ G + +A+ Q Y+
Sbjct: 214 YTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQG---HCYA 270
Query: 229 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G G+LGHG++ E P+ I+ +L + + V+ G H AVV + G+V T+G GR
Sbjct: 271 WGDGSQGQLGHGTKLLEVNEPKQIK--KLSGQKCISVSCGESHTAVVTESGKVFTFGDGR 328
Query: 288 YGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+G LG G + + P + N ++V+ G T V++ + F GE++
Sbjct: 329 HGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDGENS 384
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 36/243 (14%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSRE 167
I D G V+ FGK F + + +KN VV+ A G+ +AV++
Sbjct: 11 IPDLGAVFTFGKSKFAD--------------NIANKFWIKNDGVVEMACGDEHSAVVTES 56
Query: 168 GRVYTF---SWGNDARLGHH---TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
GR+Y F WG LGH +P+ V+P L+ V ++A G + + +
Sbjct: 57 GRLYVFGSNDWG-QLGLGHTKSLNKPSFVKP------LKPEKVRKVACGRNHTIVYS--E 107
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
SG ++S GC G+LGH + +E P+ IE + ++ +A G +H+ ++ +DG V
Sbjct: 108 SG-KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQ--IACGTYHSIILSEDGDVY 164
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG G LG G E S+PK ++ +V + V+ G Y T +V+ DG +Y+FG E
Sbjct: 165 VWGNNNEGQLGLGEEVENSLPKKLKFKKEV--VSVSCGYYHTALVTRDGFLYTFGENELG 222
Query: 342 SLG 344
LG
Sbjct: 223 KLG 225
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ + E Q G HSI ++ G VY +G+N+ GQLG G E P+ ++ + +
Sbjct: 137 ESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EV 194
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVE-SLKNIFVVQA 154
+ + G T L++ G +Y FG++ G + G+ ++L T PQ V N +
Sbjct: 195 VSVSCGYYHTALVTRDGFLYTFGENELG--KLGLSSSQLSNTTVPQSVAMPADNDEYISV 252
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G T ++++G Y + G+ +LGH T+ LL E + +++ C
Sbjct: 253 SCGARHTVAITKQGHCYAWGDGSQGQLGHGTK--------LLEVNEPKQIKKLSGQKC-- 302
Query: 215 LALACQPSGMA-------VYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVA 265
++++C S A V++ G G GKLG G S ++ P + +F N+ V V+
Sbjct: 303 ISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNV--VYVS 360
Query: 266 AGAWHAAVV 274
G H V+
Sbjct: 361 CGGCHTLVL 369
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +F + N V +A G H+AVV + GR+ +G +G LG G+ + + P V+ L
Sbjct: 28 NIANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPL 87
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVCSLLFLSIFQ 363
K VA G T V SE G ++SFGC E LGH N + ++ S+ + I Q
Sbjct: 88 KPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQ 146
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P SL +R IQ A G ++ G++Y+ G
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGY 4053
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 4054 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + + P L+ L + +V IA G + A+ S +Y+ G G G+LGH
Sbjct: 4112 KLGHGNKVSYDRPK-LIEDLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4167
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4168 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + ++ G VY++G G+ LGH
Sbjct: 4228 KVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4273
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT+ G +YS G ++G+LG G T+ P + S+Q + I + A +G + +S G
Sbjct: 4041 AVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY++G+ G+ +G + + P+L+E L + +V A G +A ++ G +YT+
Sbjct: 4101 HVYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWG 4158
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + + P ++ L++ V+ +A G L C V+S G G
Sbjct: 4159 KGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGDY 4216
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P I+ L L V V G+ + + + G V TWG G Y LGHG
Sbjct: 4217 GKLGRGGSDGCKVPLKID--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
++ P+ V AL K I +ATG S+ G+V+++G + LG DG
Sbjct: 4275 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-----DGTTS 4329
Query: 355 SLLFLSIFQYLQ 366
+L + LQ
Sbjct: 4330 ALHRPRLVHALQ 4341
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 9/312 (2%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 105
IAG ++ + S+ G +Y+ G ++G+LG G P+ I L I + A +G
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGK 3109
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + P+L+E LK+ + A G+ +A ++
Sbjct: 3110 HALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEVLKSKRIRDIACGSGHSAAIA 3167
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH P L+ L VVQ+A G +A G
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALIGHRVVQVACGSRDAQTMALTTDGY- 3225
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P L+++ NL + V GA + + + G V TWG
Sbjct: 3226 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLN--NLGVIQVECGAQFSLALTKYGEVWTWGK 3283
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G + G+
Sbjct: 3284 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3343
Query: 346 NAIADGQVCSLL 357
+ + SL+
Sbjct: 3344 GTTSVNRKPSLV 3355
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H IA++S+G VYS+G G+LGHG RP+ I L G+ I+ A G +
Sbjct: 4088 SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 4147
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4148 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4205
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+++ G+ +LG +D PL + +L + VV++ G + +AL SG AV
Sbjct: 4206 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 4260
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4261 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4318
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4319 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4359
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I L+ RI A G+G +
Sbjct: 3106 SGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAA 3165
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ G++Y +G +G +G T+ T P+LV++L VVQ A G + T L+ +
Sbjct: 3166 IASNGELYTWGLGEYGRLGHGDTITQ--TRPKLVQALIGHRVVQVACGSRDAQTMALTTD 3223
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L N+ V+Q+ G + LAL V+
Sbjct: 3224 GYVYSWGDGDFGKLGRGGSDGCYTPL-LVDRLNNLGVIQVECGAQFSLALT---KYGEVW 3279
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + + VA GA H V G+V WG
Sbjct: 3280 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDND 3337
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L D + V+ G
Sbjct: 3338 HGQQGNGTTSVNRKPSLVHDLEDARVNRVSCG 3369
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I +I + A + ++ G VY++G G +G T P+L+E+L
Sbjct: 564 SDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHG--DTISYDEPKLIEALLEKN 621
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
++ A G+ ++A LS G +YT+ GN RLGH +DV L+ TL+ VV +A G
Sbjct: 622 IIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNF-DDVMTPTLVTTLKGHTVVHVACG 680
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L SG+ V+S G G GKLG G K P+++++ LL++ V V G+
Sbjct: 681 SGDSQTLCVTASGI-VFSWGDGDYGKLGRGGTDGSKTPKIVDK--LLDINVVKVFCGSQF 737
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A + G V TWG G LGHG+EE PKV+++L D K ++ G ++ED
Sbjct: 738 SAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQ 797
Query: 331 DVYSFG 336
VY +G
Sbjct: 798 FVYGWG 803
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 128/249 (51%), Gaps = 19/249 (7%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E+L + + A G+ ++S+EG++Y
Sbjct: 3014 VYVWGLNDKDQLG----GLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068
Query: 173 FSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
G + RLG + N EP P L I V + +G + LAL V+S G
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFV-IKKVAVHSGGKHALALT---QDGKVFSWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G GKLGHG+ P+LIE + ++ +A G+ H+A + +G + TWG G YG
Sbjct: 3125 EGEDGKLGHGNCISLDKPKLIEVLKSKRIRD--IACGSGHSAAIASNGELYTWGLGEYGR 3182
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAI 348
LGHG+ ++ PK+VQAL + + VA G D T ++ DG VYS+G G+ LG
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG- 3241
Query: 349 ADGQVCSLL 357
+DG LL
Sbjct: 3242 SDGCYTPLL 3250
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T G VYS+G+ G+LGHG T P+ I +L II A G+ + +S
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSAN 638
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G V +P LV +LK VV A G+ + L F
Sbjct: 639 GELYTWGRGNYGRLGHG--NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 696
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 697 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 752
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHGS ++P++IE + ++ + V G H + +D V WG YG +
Sbjct: 753 GDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 810
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
S P + L+ I +A+G +F
Sbjct: 811 DPTLGPIISEPTLCPTLSSKTVIGLASGPTQSF 843
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 628 GSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTL 687
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G+ F+A L+ G
Sbjct: 688 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 745
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ G+ RLGH +E + P ++ +L + V ++ G ++LAL
Sbjct: 746 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDRKVKDLSVGTTHILALT 794
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 20/241 (8%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVL 164
M++S G VY S E +Y PQ V + + A G + A L
Sbjct: 537 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKPITMIASHADGKHYLA-L 583
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+++G VY++ G+ RLGH + EP + LE ++ IA G Y AL+ +
Sbjct: 584 TQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEK-NIIFIACGSTYSAALS---ANG 639
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+Y+ G G G+LGHG+ D P L+ + + V +G V G V +WG
Sbjct: 640 ELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 699
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G YG LG G + PK+V L D+ + V G + ++ G+VY++G G++ LG
Sbjct: 700 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG 759
Query: 345 H 345
H
Sbjct: 760 H 760
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG P P P +L + +Q+A G L A+
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTAD 4045
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+YS G G G+LG G P L+E Q + ++ V V++G H + +G V
Sbjct: 4046 GK---IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN+ PK+++ L V+ + +A G + + ++ G +Y++G G
Sbjct: 4103 YSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4163 GRLGHGDSDD 4172
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 211 YCYLLA------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
YC +A L C + + S+ G + HGS T ++P+ + F + +
Sbjct: 517 YCDAIAELGIKQLCCTERALMILSLN-GNVYNMYHGSET--QYPQRVHGFSDKPITMIAS 573
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A H + QDG V +WG G G LGHG+ PK+++AL + I +A G +
Sbjct: 574 HADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSA 633
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+S +G++Y++G G LGH D +L+
Sbjct: 634 ALSANGELYTWGRGNYGRLGHGNFDDVMTPTLV 666
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +II A GA
Sbjct: 3261 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3320
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L++ V + + G+
Sbjct: 3321 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHDLEDARVNRVSCGS 3370
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G+ +
Sbjct: 681 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 740
Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +GK G+A G + V P+++ESL++ V ++G L+ +
Sbjct: 741 LTAHGEVYTWGK---GDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQ 797
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 798 FVYGWGRNDYGQIDPTLGPIISEP-TLCPTLSSKTVIGLASG 838
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4298 TGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4357
Query: 110 ISDA 113
S A
Sbjct: 4358 WSTA 4361
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ G S A+T+ G VY++G + +LGHG+ E P+ I SL+ ++ + G
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTH 789
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ +++ VY +G++ +G+ + + +++ P L +L + V+ A G
Sbjct: 790 ILALTEDQFVYGWGRNDYGQIDPTL--GPIISEPTLCPTLSSKTVIGLASG 838
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P + L+ R+ + + G+ ++
Sbjct: 3317 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSI 3374
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 31/235 (13%)
Query: 131 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
+ K++ +PQ + ++ + +G+ FT ++ E R T + D
Sbjct: 2891 IHSLKIIVNPQDNSYMPSVIAIN--VGDSFTNLV--ELRTITIRYL------------DT 2934
Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
L E P ++IA C + C+ G+ + +G + ++ L
Sbjct: 2935 NVTLLQDMKEYYPCIEIAIKQCRNGGIDCKIHGLRI------MGRQNMFENQLTTSVSFL 2988
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+++L Q + + Q V WG LG +P + L+
Sbjct: 2989 ASDWEVLQKQIAIQRS----VDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSK 3044
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC---SLLFLSIF 362
+K IH+A G T F+VS++G +Y+ G G + LG D +C ++ FLS F
Sbjct: 3045 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLG--DDNNMCEPKAIPFLSQF 3097
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 162/329 (49%), Gaps = 26/329 (7%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG V+++G++ G + G+ T+ PQ +++ + + V A G TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNG--QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEK-VSSVNGQKMVLVACGWRHTITVS---SSG 252
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---------------FQLLNLQPVVVAAG-A 268
++Y+ G G+LGHG D P +E F L + V G
Sbjct: 253 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQ 312
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
W A DG++ WGW ++G +G G+ E P V N+ K + VA G T ++E
Sbjct: 313 WALAA---DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE 369
Query: 329 DGDVYSFGCGESASLGHNAIADGQVCSLL 357
+V+S+G G S LGH I D + ++
Sbjct: 370 AKNVFSWGRGTSGQLGHGEIVDRNIPKMI 398
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 140/301 (46%), Gaps = 55/301 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S GVV S+G GQLGHG E+ RP P T+L
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 66
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ +F +A GV + + + TA E +
Sbjct: 67 TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 98 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 350 D 350
D
Sbjct: 272 D 272
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 19/315 (6%)
Query: 49 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
I G H+IA + S VYS+G G+LGHG + + + P+PIR L G++I Q A G
Sbjct: 72 ICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHC 131
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++ GQV ++G++ G+ G LV PQ +++ + + + A G TA ++ +
Sbjct: 132 LAVTMEGQVQSWGRNQNGQLGLGTTEDSLV--PQKIQAFQGVPIKMVAAGAEHTAAVTED 189
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 223
G +Y + WG LG + + P + ++P +V +A G+ + ++++ S
Sbjct: 190 GELYGWGWGRYGNLGLGDRKDRLVPEKV-----SLPHGEKMVMVACGWRHTISVS---SS 241
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
+Y+ G G+LGHG D P +E Q + + +G W H V DG++
Sbjct: 242 GGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQI---SGGWRHTMAVTSDGKLYG 298
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WGW ++G +G G+ S P V+ + K I ++ G T V+E +V+S+G G +
Sbjct: 299 WGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQ 358
Query: 343 LGHNAIADGQVCSLL 357
LG+ D V ++
Sbjct: 359 LGNGECTDRNVPVII 373
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 11/297 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S VV ++G GQLGHG ++ P + +L+G+ II GA T+
Sbjct: 21 AGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIA 80
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ VY++G FG +G + L T PQ + L + + Q A G+ ++ EG
Sbjct: 81 YSESHTDVYSWGWGDFGRLGHG-NSSDLFT-PQPIRQLHGLKIKQIACGDSHCLAVTMEG 138
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V ++ + +LG T + + P + + +P+ +AAG + A+ +Y
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVPIKMVAAGAEHTAAVT---EDGELYG 194
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
G G G LG G R D P E+ L + + +V+ A W H V G + T+GW +
Sbjct: 195 WGWGRYGNLGLGDRKDRLVP---EKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK 251
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LGHG+ +P ++AL ++ G T V+ DG +Y +G + +G
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 308
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
P+R R++ +AGA ++ + V +G+ G+ +G +L SP ++ +L+
Sbjct: 12 PVR-----RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLE 64
Query: 148 NIFVVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ ++ G T S VY++ WG+ RLGH + P P+ L + + Q
Sbjct: 65 GLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIR-QLHGLKIKQ 123
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
IA G + LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +VAA
Sbjct: 124 IACGDSHCLAVTMEGQ---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIK--MVAA 178
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA H A V +DG + WGWGRYG LG G+ + VP+ V + K + VA G T V
Sbjct: 179 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV 238
Query: 327 SEDGDVYSFGCGESASLGHNAIAD 350
S G +Y++G + LGH AD
Sbjct: 239 SSSGGLYTYGWSKYGQLGHGDYAD 262
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G++Y +G +G G + +LV P+ V +V A G T +S
Sbjct: 183 TAAVTEDGELYGWGWGRYGNLGLGDRKDRLV--PEKVSLPHGEKMVMVACGWRHTISVSS 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L+ + QI+ G+ + +A+ S +
Sbjct: 241 SGGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVT---SDGKL 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q +L Q V++ + W H V + V +WG
Sbjct: 297 YGWGWNKFGQVGVGDNVDRSSPV---QVKLPLEQKVILISCGWRHTLAVTERQNVFSWGR 353
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG+G +VP +++AL+
Sbjct: 354 GTNGQLGNGECTDRNVPVIIKALS 377
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++AVTS G +Y +G N GQ+G G + P ++ ++I + G
Sbjct: 278 SQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWR 337
Query: 106 RTMLISDAGQVYAFGKDSFGE 126
T+ +++ V+++G+ + G+
Sbjct: 338 HTLAVTERQNVFSWGRGTNGQ 358
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 11/307 (3%)
Query: 46 SQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+R+LQGI+I Q A G
Sbjct: 76 TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGD 135
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ G+V ++G++ G+ G L+ PQ +++ + I V A G TA +
Sbjct: 136 SHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGICVKMIAAGAEHTAAV 193
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + P + +E +V IA G+ + + ++ SG+
Sbjct: 194 TEDGDLYGWGWGRYGNLGLGDRNDRFVPEKV-SLVEGEKMVLIACGWRHTITVSS--SGI 250
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 251 -LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 306
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GW ++G +G G+ P V + K VA G T +E +V+++G G S L
Sbjct: 307 GWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQL 366
Query: 344 GHNAIAD 350
GH I D
Sbjct: 367 GHGEIVD 373
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 139/303 (45%), Gaps = 11/303 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ V+ S+G GQLGHG E+ P I RI GA T
Sbjct: 28 AGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTA 87
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S+ QVY++G FG +G + V +PQ V +L+ I + Q A G+ ++ G
Sbjct: 88 YSEEEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGG 145
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 146 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFEGICVKMIAAGAEHTAAVTEDGD---LYG 201
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
G G G LG G R D P E+ L+ + +V+ A W H V G + T+GW +
Sbjct: 202 WGWGRYGNLGLGDRNDRFVP---EKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
YG LGHG+ E P V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318
Query: 348 IAD 350
D
Sbjct: 319 SVD 321
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + + ++G+ G+ +G +LV P ++ +
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV--PTVISGFDAPRITSVIC 80
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 81 GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVR-ALQGIKIKQMACGDSHCL 139
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ G V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 140 AVTM---GGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVK--MIAAGAEHTAAVT 194
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ VP+ V + K + +A G T VS G +Y++
Sbjct: 195 EDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 255 GWSKYGQLGHGDFED 269
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +GI + AAGA
Sbjct: 130 QMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEH 189
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + + V P+ V ++ +V A G T +S
Sbjct: 190 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRFV--PEKVSLVEGEKMVLIACGWRHTITVSS 247
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH + L++ QI+ G+ + +AL S +
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 303
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q Q V A W H + V WG
Sbjct: 304 YGWGWNKFGQVGAGDSVDHCSPV---QVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGR 360
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + P ++ A++
Sbjct: 361 GTSGQLGHGEIVDRNKPLMIDAIS 384
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 18/304 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ + S G V+++G+N GQLG G T+ P+P+ L+G+ + AAG T+
Sbjct: 174 AGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV--VALAAGFDFTLA 231
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V ++G +SFG+ G +L SP+ + +L I V A G + L ++G
Sbjct: 232 VHADGAVSSWGANSFGQLGLGTFTQRL--SPERIPTLSGITSVAA--GTYHAVALGKDGT 287
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+T+ + +LG T + P PL G V + AG LL G V +
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALL------EGGDVLAW 341
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G D P L+ + + V GA HA + +DG + WG G G
Sbjct: 342 GANNSGQLGDGDTADRSTPSLVPELSAVT----AVVGGAQHALALRKDGTLWAWGGGLAG 397
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGHG E VP V L +V ++ ATG + + EDG V+++G LG +
Sbjct: 398 QLGHGGSERHVVPATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVT 455
Query: 350 DGQV 353
+ V
Sbjct: 456 ERHV 459
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 21/310 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ +T G V+++G NS+GQLG T + R P R I+ +G ++
Sbjct: 73 AGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQ-RLSPARLPVLEDIVSVVSGDAHSLA 131
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G +S G+ G T PQ VE ++ V A G+F + VL +G
Sbjct: 132 LGADGTVWTWGSNSSGQLGDGT--TTDRAEPQRVEGFTDVVAVAA--GDFHSLVLKSDGT 187
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG + +LG + P P+ G LE VV +AAG+ + LA+ AV
Sbjct: 188 VW--AWGTNFHGQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHAD---GAVS 239
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G+LG G+ T P I + VAAG +HA +G+DG V TWG
Sbjct: 240 SWGANSFGQLGLGTFTQRLSPERIPTLSGIT----SVAAGTYHAVALGKDGTVWTWGSNS 295
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G +VP + + +A VA+ D + + E GDV ++G S LG
Sbjct: 296 SGQLGDGTWNDRAVPAPLPGVGGARA--VASLDAGSLALLEGGDVLAWGANNSGQLGDGD 353
Query: 348 IADGQVCSLL 357
AD SL+
Sbjct: 354 TADRSTPSLV 363
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 23/309 (7%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
G +C R S G HS+ + G V+++G N GQLG GTT P + L+G
Sbjct: 815 GVSCARSVAS----GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEG-- 868
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I+ A G ++ + G V+A+G ++ G+ G +L +P+ +E+L ++ V+ A+
Sbjct: 869 IVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRL--TPRRIEALSDVMVI--AL 924
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + +G V+ + +LG E + P + G LE V +AAG + +
Sbjct: 925 GESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKG-LEG--VGSVAAGRAF--S 979
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G A ++ G G+LG GS + P + + L V+AGA HA +G+
Sbjct: 980 LAVRDDGTA-WAWGANESGQLGDGSNQSRRVPHRVASVKGLR----AVSAGAHHAMALGE 1034
Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG G LG G + P+ V L+DV++ VA G+ + V+ DG +S+
Sbjct: 1035 DGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVES--VAAGEQFSVAVAHDGTAFSW 1092
Query: 336 GCGESASLG 344
G E LG
Sbjct: 1093 GSNEYGQLG 1101
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 19/271 (7%)
Query: 47 QAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+A+A GH SIAV G V+++G N++GQLG GTT + RP + L + I AAG
Sbjct: 470 RAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAI--AAGGS 527
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ + G V+A+G ++ G+ G G KL +P V L I V A G +F+ L+
Sbjct: 528 HVLALRSDGDVWAWGYNALGQLGDGTSGDKL--TPVRVPGLAPIQSVAA--GTYFSMALA 583
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T+ G + +LG + P + G L +I + + + + ALA + G
Sbjct: 584 NDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKG-LSDIRNISVGSAH----ALAVRGDGT- 637
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG GS D P Q+ NL + V+ G H+ + DG V WG
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAP-----VQVRNLTGITAVSGGRSHSLALHADGTVRAWG 692
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
YG LG G +P V+ L+ ++A+H
Sbjct: 693 SNGYGQLGDGTLTSRVLPSVIPGLSGIQALH 723
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 153/354 (43%), Gaps = 69/354 (19%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+AV G +++G+N SGQLG G+ + P + S++G+R + +AGA M
Sbjct: 974 AGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRAV--SAGAHHAMA 1031
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+A+G ++ G+ G V PQ V L ++ V A G F+ ++ +G
Sbjct: 1032 LGEDGAVWAWGDNTLGQLGDGTS-AFTVMWPQRVAELSDVESVAA--GEQFSVAVAHDG- 1087
Query: 170 VYTFSWGN-------DARLGHHTEPNDVE----------------PHPLL----GTLEN- 201
FSWG+ D + G P +V+ H + GTL+
Sbjct: 1088 -TAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAW 1146
Query: 202 -------------------------IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
V ++ G + LAL + V++ G G+
Sbjct: 1147 GDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGT---VWAWGANGFGQ 1203
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LG G+ T P ++ + + V +AAG +H+ V DG V TWG+ +G LG G
Sbjct: 1204 LGDGTTTARAVPVPVQGLRDV----VAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTS 1259
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
E ++P V L V+A V GD+ + + DG V +G S LG + D
Sbjct: 1260 ESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 24/305 (7%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+ G H++A+ G ++++G +GQLGHG +E P + L + A G+ ++
Sbjct: 373 VGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL--TNVTSMATGSFHSL 430
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G++S+G+ G + V P V L ++ V AA + ++ +G
Sbjct: 431 AALEDGSVWAWGRNSYGQLGDGTVTERHV--PVRVPGLPSVRAVAAA--GHHSIAVAMDG 486
Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+T WG +A +LG T + P + G V+ IAAG ++LAL V
Sbjct: 487 TVWT--WGRNAAGQLGDGTTRDRARPVAVSGLTS---VLAIAAGGSHVLALRSDGD---V 538
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG G+ D+ P ++ L P+ VAAG + + + DG V TWG
Sbjct: 539 WAWGYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMALANDGTVWTWGE 593
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LG G P V+ L+D++ I V G V DG V+++G LG
Sbjct: 594 GFEGQLGDGGGVQRLSPVAVKGLSDIRNISV--GSAHALAVRGDGTVWAWGDNNEGQLGD 651
Query: 346 NAIAD 350
+ D
Sbjct: 652 GSWMD 656
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 145/314 (46%), Gaps = 25/314 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISD 112
HS+A G V+++G NS GQLG GT E R P+R + G+ ++A A AG ++ ++
Sbjct: 428 HSLAALEDGSVWAWGRNSYGQLGDGTVTE--RHVPVR-VPGLPSVRAVAAAGHHSIAVAM 484
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+ +G+++ G+ G T+ P V L ++ + A G L +G V+
Sbjct: 485 DGTVWTWGRNAAGQLGDGT--TRDRARPVAVSGLTSVLAIAA--GGSHVLALRSDGDVWA 540
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ + +LG T + + P + G P+ +AAG + +ALA + V++ G G
Sbjct: 541 WGYNALGQLGDGTSGDKLTPVRVPGL---APIQSVAAGTYFSMALANDGT---VWTWGEG 594
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G P ++ + ++ G+ HA V DG V WG G LG
Sbjct: 595 FEGQLGDGGGVQRLSPVAVKGLSDIR----NISVGSAHALAVRGDGTVWAWGDNNEGQLG 650
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
G+ P V+ L + A V+ G + + DG V ++G S G+ + DG
Sbjct: 651 DGSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHADGTVRAWG-----SNGYGQLGDGT 703
Query: 353 VCSLLFLSIFQYLQ 366
+ S + S+ L
Sbjct: 704 LTSRVLPSVIPGLS 717
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 68/342 (19%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ + G + ++G N++GQLG GTT P IR + R+ + GA ++ +
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWHSLALRLD 1190
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + FG+ G + V P V+ L+++ + A G + + + +G V+T+
Sbjct: 1191 GTVWAWGANGFGQLGDGTTTARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTW 1246
Query: 174 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+ +LG T + P H L G V + G + LAL + V G
Sbjct: 1247 GYNTFGQLGDGTSESRALPVQVHKLEG------VQAVTGGDHHSLALHADGT---VSGWG 1297
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLN-------------------------------- 258
G+LG GSRTD P ++ L
Sbjct: 1298 HNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG 1357
Query: 259 ---------LQPV-------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+PV + AGAWH+ G + TWG +G LG G+ + P
Sbjct: 1358 VTGPRMRLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEP 1417
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ ++ L+ +K I A G T+ ++++G + S+G +LG
Sbjct: 1418 QRMKLLSGLKVI--AGGADTSLAMTQEGVLMSWGSSLHGTLG 1457
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 44 ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E A+AG G S+A+ S G V+++G+N+SGQ+G GT E+ PR I +L + +I A
Sbjct: 867 EGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVI--AL 924
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + + + G V+A+G ++ G+ G + L+ P V+ L+ + V A G F+
Sbjct: 925 GESHALAVGEDGTVWAWGANASGQLGDGGETPSLL--PARVKGLEGVGSVAA--GRAFSL 980
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ +G + + +LG + + PH + +++ + V +AG + +AL
Sbjct: 981 AVRDDGTAWAWGANESGQLGDGSNQSRRVPH-RVASVKGLRAV--SAGAHHAMALGED-- 1035
Query: 223 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
AV++ G G+LG G+ P+ + + + VAAG + V DG
Sbjct: 1036 -GAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVE----SVAAGEQFSVAVAHDGTAF 1090
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFGCGE 339
+WG YG LG G P V+ V G + V+ DG + ++G
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150
Query: 340 SASLG 344
+ LG
Sbjct: 1151 TGQLG 1155
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 155/358 (43%), Gaps = 66/358 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A+ S G V+++G N+ GQLG GT+ ++ P + L I+ + AAG +M
Sbjct: 524 AGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSV--AAGTYFSMA 581
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G V+ +G + F E + G G SP V+ L +I + ++G+ + +G
Sbjct: 582 LANDGTVWTWG-EGF-EGQLGDGGGVQRLSPVAVKGLSDIRNI--SVGSAHALAVRGDGT 637
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N+ +LG + + P + N+ + ++ G + LAL + A S
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAPV----QVRNLTGITAVSGGRSHSLALHADGTVRAWGS 693
Query: 229 VGCGLGGKLGHGSRTDEKHPRLI------------------------------EQFQLLN 258
G G +LG G+ T P +I +F L
Sbjct: 694 NGYG---QLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLG 750
Query: 259 L-------QPVVV---------AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
L +PV V AAG HA +V DG V WG G LG G +
Sbjct: 751 LGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARA 810
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQVCSL 356
V+ ++ ++ VA+G + V++ DG V+++G + LG +A G+V L
Sbjct: 811 VTVRGVSCARS--VASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGL 866
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 25/253 (9%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS+AV S G V+++G N+ GQLG GT+E P + L+G++ + G
Sbjct: 1226 AIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTG--GDHH 1283
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G V +G ++ G+ G + + +P ++ + + V+A G T L +
Sbjct: 1284 SLALHADGTVSGWGHNASGQLGDGSRTDRY--TPVRLKDVDGLTEVRA--GAAHTVALGK 1339
Query: 167 EGRVYTFSWGNDA--RLGHH-TEPN-DVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 221
+G V+T WG++A +LG T P + P P+ G +P I AG + A +
Sbjct: 1340 DGTVWT--WGDNAHGQLGDGVTGPRMRLVPKPVSG----LPAATAIGAGAWHSFASGPEE 1393
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
++ G G+LG G P+ ++ L V+A GA + + Q+G +
Sbjct: 1394 ---GAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGLK----VIAGGADTSLAMTQEGVLM 1446
Query: 282 TWGWGRYGCLGHG 294
+WG +G LG G
Sbjct: 1447 SWGSSLHGTLGLG 1459
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 42 RRENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
+ E QA+ G H S+A+ + G V +G N+SGQLG G+ + + P ++ + G+ ++
Sbjct: 1270 KLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVR- 1328
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AGA T+ + G V+ +G ++ G+ GV G ++ P+ V L + A + F
Sbjct: 1329 -AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSF 1387
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
A EG F+WG ++ +LG EP + L + V IA G LA+
Sbjct: 1388 -ASGPEEG---AFTWGRNSHGQLGVGDNAPRAEPQRMK-LLSGLKV--IAGGADTSLAMT 1440
Query: 219 CQPSGMAVYSVGCGLGGKLGHG 240
+ + S G L G LG G
Sbjct: 1441 QE---GVLMSWGSSLHGTLGLG 1459
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
E + ++IAAG + L L P+G AV++ G G+LG D RL +L L
Sbjct: 64 EPLSPMRIAAGAQHSLFL--TPTG-AVWAWGGNSAGQLGG---ADTSFQRL-SPARLPVL 116
Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ +V V +G H+ +G DG V TWG G LG G + P+ V+ DV + VA
Sbjct: 117 EDIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDV--VAVAA 174
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
GD+ + V+ DG V+++G LG
Sbjct: 175 GDFHSLVLKSDGTVWAWGTNFHGQLGQ 201
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 161/350 (46%), Gaps = 51/350 (14%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-------------------------- 83
AG HS+A+ VV S+G GQLGHG E+
Sbjct: 23 AGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 84 ---------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 128
+ P+PI++L G+RI Q A G + ++ G+V ++G++ G+
Sbjct: 83 YSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLG 142
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
G LV PQ +++ + + V A G TA ++ +G +Y + WG LG +
Sbjct: 143 LGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 200
Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
+ P + T+E + +V++A G+ + ++++ S +Y+ G G+LGHG D P
Sbjct: 201 RLVPEKV-STVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTP 256
Query: 249 RLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+E Q + + +G W H + DG++ WGW ++G +G G+ P V+
Sbjct: 257 HKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 313
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
++ K +H++ G T V+E +V+S+G G + LGH D + ++
Sbjct: 314 PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMI 363
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ + AAGA
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 172
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G++Y +G +G G + +LV P+ V +++ + +V+ A G T +S
Sbjct: 173 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 230
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L EN+ + +I+ G+ + +AL S +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 286
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 287 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 343
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG ++PK+++ L+
Sbjct: 344 GTNGQLGHGESIDRNIPKMIEVLS 367
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 24/263 (9%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 14 PVR-----RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
VV G T S E +SWG D P P+ L + + QI
Sbjct: 67 GHEVVSVTCGADHTTAYS-ESFTQVYSWGCDL----------FTPQPIK-ALHGLRIKQI 114
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VAAG
Sbjct: 115 ACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAAG 169
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
A H A V +DG + WGWGRYG LG G+ VP+ V + VK + VA G T VS
Sbjct: 170 AEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVS 229
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
G +Y++G + LGH D
Sbjct: 230 SSGGLYTYGWSKYGQLGHGDFED 252
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 153/305 (50%), Gaps = 13/305 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HSI + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 35 RSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 92
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +SD GQ++++G S G+ + V P+L++ L ++Q + GN+
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ +G+ +T+ +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRV-KSLEGIPLAQVAAGGAHSFALSL-- 208
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
SG AV+ G G+LG TD + P + +LL Q VV ++ G H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
T+G G +G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 340 SASLG 344
LG
Sbjct: 325 RGQLG 329
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLGH TTE+ PR I+ L I+Q + G M
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++ G+ G + SPQ V+SL+ I + Q A G + LS G
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 127/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 92
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LGH T + V L+ L ++Q++ G + +A
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ ++ + + L VAAG H+ +
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 268 GAGSFGQLGHDSMND 282
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+VT PQ + + + + A G + L +G VYT +LGH E N E
Sbjct: 22 IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 78
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
+G L + ++ +A G + LAL+ Q ++S G G G+LGH + D PRLI++
Sbjct: 79 IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
LN Q ++ V+ G WH + DG+ TWG R+G LG G E ++ P+ V++L +
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G +F +S G V+ +G + LG + D Q
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG + P ++ L+ +++ + G
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG SFG+ + ++ +P+ V L V Q A G T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 12/297 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG + A++ G VY++GS G+LGH E PR + +L+G I++ + G
Sbjct: 98 AGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAA 157
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREG 168
I G +Y +G+ A G GT+ V P+L++ L+ V+ + G TA ++ +G
Sbjct: 158 IDKDGHLYCWGR----AASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ G + LGH + + +P + E VV +A G + + C+ +YS
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEK--VVDVACGRDFTI-FVCES---GLYS 267
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G E+ + L VV ++AG +H +G+DG V TWG GR
Sbjct: 268 CGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGR 327
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG + S+ K V L + + + VA G T V++DG +Y++G G LG
Sbjct: 328 EGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+ A +G + + G L G+LG G P +E L + V VAAG A +
Sbjct: 49 MKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEA--LSGKRIVYVAAGDSCTAAI 106
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG V TWG G YG LGH ++ E++P++V+AL + V+ G + +DG +Y
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYC 166
Query: 335 FGCGESASLG 344
+G SA G
Sbjct: 167 WGRAASAGSG 176
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H A+ G+VY++G GQLGHG + +P+ +L+ I+Q A G G T
Sbjct: 306 AGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAA 365
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ G +Y +G+ G+ G + + TSP V SL V+ +G+ +AVL +
Sbjct: 366 VTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLCQ 425
Query: 167 E 167
+
Sbjct: 426 D 426
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ T+G G LG G+E P V+AL+ + ++VA GD T +S DGDVY++G GE
Sbjct: 60 LTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGE 119
Query: 340 SASLGHN 346
LGHN
Sbjct: 120 YGKLGHN 126
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA S ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSYGQLGHDSMND 281
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA S ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSYGQLGHDSMND 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 14/297 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
I+ T +V+ FG NS G+LG G +E P +R + + Q AAG +++ G
Sbjct: 33 ISGTGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGD 92
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTF 173
V G + G+ +G K +++P+ +ESLKNI + + +A G A++S++G++YT
Sbjct: 93 VLTVGFNGSGQLGHG--NNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTC 150
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-----CQPSGMAVYS 228
+ N +LGH T+ N P L+ L++ V ++ Y + L + VYS
Sbjct: 151 GYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
VG G+LG E P++I LN + V+ A G H+ V G V + G+
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKIIRS---LNTRQVIQTACGLHHSVFVTVHGEVFSCGFND 266
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGH + + + P ++++L + + A G Y T V + G++Y+FG + LG
Sbjct: 267 NGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLG 323
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 8/279 (2%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A + VYS G N +GQLG T E P+ IRSL ++IQ A G ++ ++ G+V
Sbjct: 200 ASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEV 259
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
++ G + G+ G TK P L+ESLKN F+VQAA G + T V G +Y F
Sbjct: 260 FSCGFNDNGQ--LGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRN 317
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA---CQPSGMAVYSVGCGL 233
+ +LG T + + + +Q + G L QPS ++ G +
Sbjct: 318 DKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIM 377
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G L + + + P++ + +N+ + A G +H+ + + G++ T+G G +G LG
Sbjct: 378 QG-LAESNNLNNQQPQVQYLSKKVNISKI--ACGCYHSIALCESGQLFTFGRGNHGQLGQ 434
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
GN E + +PK V +L+D K I +A G Y T V+ + V
Sbjct: 435 GNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAG 103
+Q AG H +T G V + G N SGQLGHG + P+ I SL+ IRI I +A G
Sbjct: 75 TQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANG 134
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+IS G++Y G +++G+ +G Q +++P LV++LK+ V + + + +
Sbjct: 135 CENLAIISQDGKLYTCGYNNYGQLGHGTQSN--LSTPTLVQALKDTQVTNVSCSYYHSLI 192
Query: 164 LSREGR--------VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
++++ R VY+ ++ +LG +++ P ++ +L V+Q A G + +
Sbjct: 193 VTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITP-KIIRSLNTRQVIQTACGLHHSV 251
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ V+S G G+LGH P LIE L N V A G +H V
Sbjct: 252 FVTVHGE---VFSCGFNDNGQLGHNDTKSRNQPVLIE--SLKNKFIVQAACGYYHTLVRR 306
Query: 276 QDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGD 320
G + +G G LG N + PK +Q V I + G+
Sbjct: 307 DTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGN 352
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ FG++S+GE G+ + + P V + V Q A GN AVL+R G V T +
Sbjct: 41 VFVFGQNSYGE--LGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P + +L+NI + I+ A C LA+ Q + Y+ G
Sbjct: 99 NGSGQLGHGNNKSISTPKKI-ESLKNIRITHISSANGCENLAIISQDGKL--YTCGYNNY 155
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR--------VCTWGWG 286
G+LGHG++++ P L++ L + Q V+ +H+ +V QD R V + G
Sbjct: 156 GQLGHGTQSNLSTPTLVQA--LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG + E PK++++LN + I A G + + V+ G+V+S G ++ LGHN
Sbjct: 214 DNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHN 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 10/242 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R+ Q G HS+ VT G V+S G N +GQLGH T+ +P I SL+ I+QAA
Sbjct: 238 RQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAAC 297
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T++ D G++YAFG++ G+ G L+ Q+ E L + +Q + GN
Sbjct: 298 GYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFL-TVSNIQHSGGNQNQL 356
Query: 163 VLSRE-GRVYTFSWGND-ARLGHHTEPNDV-EPHPLLGTL-ENIPVVQIAAGYCYLLALA 218
+E + + S G A + E N++ P + L + + + +IA G CY
Sbjct: 357 HSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACG-CYHSIAL 415
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
C+ SG +++ G G G+LG G+ D+K P+ + L + + + +A G +H V+ +
Sbjct: 416 CE-SGQ-LFTFGRGNHGQLGQGNTEDQKLPKQVA--SLHDKKVIGIAGGFYHTIVLVKQK 471
Query: 279 RV 280
+V
Sbjct: 472 KV 473
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 146/317 (46%), Gaps = 26/317 (8%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-DAGQ- 115
++ G +Y+ G N+ GQLGHGT P +++L+ ++ + +++++ D Q
Sbjct: 141 ISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQA 200
Query: 116 ------VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
VY+ G++ G+ G + T +P+++ SL V+Q A G + ++ G
Sbjct: 201 SNQQTTVYSVGRNDNGQ--LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGE 258
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V++ + ++ +LGH+ + +P L+ +L+N +VQ A GY + L + +Y+
Sbjct: 259 VFSCGFNDNGQLGHNDTKSRNQP-VLIESLKNKFIVQAACGYYHTLV---RRDTGEIYAF 314
Query: 230 GCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGR 287
G G+LG + P+ I++F L + + + G + GQ+ + + G
Sbjct: 315 GRNDKGQLGIETNGQALIQPKQIQEF--LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGE 372
Query: 288 YGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G + G E ++ P+V V +A G Y + + E G +++FG G L
Sbjct: 373 SGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQL 432
Query: 344 GHNAIAD----GQVCSL 356
G D QV SL
Sbjct: 433 GQGNTEDQKLPKQVASL 449
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G VT +G V++ G + G+LG G+ E P I S+Q + I Q + AG
Sbjct: 1444 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1503
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S+ G+VY++G+ G+ +G + + + P+++ESL+ +V+ A G +A +
Sbjct: 1504 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1561
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L++ VV +A G L C G
Sbjct: 1562 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1619
Query: 225 ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
V+S G G GKLG G K P +I+ L+ VA G+ + + + G V
Sbjct: 1620 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1677
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWG G Y LGHG++E PK++++L +K + V+ G ++GDVY++G +
Sbjct: 1678 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1737
Query: 341 ASLGHNAIADGQVCSLL 357
+G Q+ L+
Sbjct: 1738 GQIGDGTTQATQIPRLV 1754
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A++++G VYS+G G+LGHG PR I SL+G I++ A G +
Sbjct: 1501 AGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAA 1560
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----S 165
I+ G +Y +GK +G G + ++ P+LV +LK+ VV A GN L
Sbjct: 1561 INATGGLYTWGKGRYGR--LGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEG 1618
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G +SWG+ +LG P ++ TL + +A G + LAL+
Sbjct: 1619 TGGSSVVWSWGDGDYGKLGRGGSDGCKVP-AIIDTLMGKHITHVACGSQFSLALS---KA 1674
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G +LGHGS + P+LIE L ++ V V+ G+ H +G V TW
Sbjct: 1675 GGVYTWGKGDYYRLGHGSDEHVRRPKLIES--LRGMKVVEVSVGSLHCIAAVDNGDVYTW 1732
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G G +G G + +P++V AL HV+ G T
Sbjct: 1733 GDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHT 1772
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 93
+A + R + +Q I G AVT G VY+ G ++SG+LG G T R + Q
Sbjct: 455 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 514
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
I+ + +G M ++ G VY++G G+ +G + L +P+ +E+ +
Sbjct: 515 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 572
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G+ +A + G +YT+ G RLGH ++P P+ L VVQ+A G
Sbjct: 573 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 631
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
L G+ VYS G G GKLG G P+ +E+ L+ Q VV + GA +
Sbjct: 632 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 687
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ + G V TWG G Y LGHG+++ P+VV+ L + K + VA G V+E G V
Sbjct: 688 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 747
Query: 333 YSFGCGESASLGH 345
+++G + G+
Sbjct: 748 FAWGDNDHGQQGN 760
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 16/294 (5%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G ++ +G N GQLG + P P SL ++ IQ G ++ G+V+A G
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1466
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ + V P L+ES++++ + Q ++ G LS EG VY++ G D
Sbjct: 1467 GAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1524
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L +V++A G + + A +G +Y+ G G G+LGH
Sbjct: 1525 KLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGH 1580
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGH 293
D+ P+L+ + NL V VA G A + G G W W G YG LG
Sbjct: 1581 EDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1638
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP ++ L HVA G + +S+ G VY++G G+ LGH +
Sbjct: 1639 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS 1692
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G VYS+G G+LGHG+ + PR I + I + G+ +
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 582
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I +G +Y +G +G +G T L P+ V++L VVQ A G + T L+++
Sbjct: 583 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 640
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P P + L VV+I G + LAL+ G+ V+
Sbjct: 641 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 696
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+++E L + V VA GA H V + G+V WG
Sbjct: 697 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 754
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P VQ L VK +A G
Sbjct: 755 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 786
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 25/294 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P + LQ +++ Q G+ ++ G+VYA G+ +
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 491
Query: 124 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G G V V PQ ++ L G L+ +G VY++ G +
Sbjct: 492 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 545
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+LGH + + + P +E P + I+ G + A+ S +Y+ G G+ G
Sbjct: 546 GKLGHGSRADALTPR----KIETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYG 598
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
+LGHG+ P+ ++ L Q V VA G+ A + QDG V +WG G +G LG
Sbjct: 599 RLGHGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 656
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VPK V+ L+ + + G + +S G V+++G G+ LGH +
Sbjct: 657 GGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS 710
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 217
LS G F WG++ R G P + P P L L+ I Q+ G L +
Sbjct: 1400 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1455
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ V++ G G GG+LG GS P LIE Q +++ V V AG H + +
Sbjct: 1456 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1512
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V +WG G G LGHGN P+++++L + VATG + ++ G +Y++G
Sbjct: 1513 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1572
Query: 338 GESASLGHNAIAD 350
G LGH D
Sbjct: 1573 GRYGRLGHEDSED 1585
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H IA G VY++G N GQ+G GTT+ PR + +LQG I + G+ T+
Sbjct: 1716 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1773
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G V+++G N GQ G+G T +P ++ L+G++I + A G+ ++
Sbjct: 734 GALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793
Query: 111 SDAGQ 115
+D
Sbjct: 794 ADTSH 798
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
GL K G KH + L L+ V G+ V G+V G G L
Sbjct: 436 GLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 495
Query: 292 GHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
G G SV ++ Q L +K + V +G ++ DG VYS+G GE LGH + A
Sbjct: 496 GLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRA 554
Query: 350 DG 351
D
Sbjct: 555 DA 556
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G VT +G V++ G + G+LG G+ E P I S+Q + I Q + AG
Sbjct: 1443 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1502
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S+ G+VY++G+ G+ +G + + + P+++ESL+ +V+ A G +A +
Sbjct: 1503 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1560
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L++ VV +A G L C G
Sbjct: 1561 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1618
Query: 225 ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
V+S G G GKLG G K P +I+ L+ VA G+ + + + G V
Sbjct: 1619 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1676
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWG G Y LGHG++E PK++++L +K + V+ G ++GDVY++G +
Sbjct: 1677 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1736
Query: 341 ASLGHNAIADGQVCSLL 357
+G Q+ L+
Sbjct: 1737 GQIGDGTTQATQIPRLV 1753
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A++++G VYS+G G+LGHG PR I SL+G I++ A G +
Sbjct: 1500 AGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAA 1559
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----S 165
I+ G +Y +GK +G G + ++ P+LV +LK+ VV A GN L
Sbjct: 1560 INATGGLYTWGKGRYGR--LGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEG 1617
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G +SWG+ +LG P ++ TL + +A G + LAL+
Sbjct: 1618 TGGSSVVWSWGDGDYGKLGRGGSDGCKVP-AIIDTLMGKHITHVACGSQFSLALS---KA 1673
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G +LGHGS + P+LIE L ++ V V+ G+ H +G V TW
Sbjct: 1674 GGVYTWGKGDYYRLGHGSDEHVRRPKLIES--LRGMKVVEVSVGSLHCIAAVDNGDVYTW 1731
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G G +G G + +P++V AL HV+ G T
Sbjct: 1732 GDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHT 1771
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 93
+A + R + +Q I G AVT G VY+ G ++SG+LG G T R + Q
Sbjct: 454 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 513
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
I+ + +G M ++ G VY++G G+ +G + L +P+ +E+ +
Sbjct: 514 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 571
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G+ +A + G +YT+ G RLGH ++P P+ L VVQ+A G
Sbjct: 572 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 630
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
L G+ VYS G G GKLG G P+ +E+ L+ Q VV + GA +
Sbjct: 631 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 686
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ + G V TWG G Y LGHG+++ P+VV+ L + K + VA G V+E G V
Sbjct: 687 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 746
Query: 333 YSFGCGESASLGH 345
+++G + G+
Sbjct: 747 FAWGDNDHGQQGN 759
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 16/294 (5%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G ++ +G N GQLG + P P SL ++ IQ G ++ G+V+A G
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1465
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ + V P L+ES++++ + Q ++ G LS EG VY++ G D
Sbjct: 1466 GAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1523
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L +V++A G + + A +G +Y+ G G G+LGH
Sbjct: 1524 KLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGH 1579
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGH 293
D+ P+L+ + NL V VA G A + G G W W G YG LG
Sbjct: 1580 EDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1637
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP ++ L HVA G + +S+ G VY++G G+ LGH +
Sbjct: 1638 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGS 1691
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G VYS+G G+LGHG+ + PR I + I + G+ +
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 581
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I +G +Y +G +G +G T L P+ V++L VVQ A G + T L+++
Sbjct: 582 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 639
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P P + L VV+I G + LAL+ G+ V+
Sbjct: 640 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 695
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+++E L + V VA GA H V + G+V WG
Sbjct: 696 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 753
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P VQ L VK +A G
Sbjct: 754 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 785
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 25/294 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P + LQ +++ Q G+ ++ G+VYA G+ +
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 490
Query: 124 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G G V V PQ ++ L G L+ +G VY++ G +
Sbjct: 491 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 544
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+LGH + + + P +E P + I+ G + A+ S +Y+ G G+ G
Sbjct: 545 GKLGHGSRADALTPR----KIETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYG 597
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
+LGHG+ P+ ++ L Q V VA G+ A + QDG V +WG G +G LG
Sbjct: 598 RLGHGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 655
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VPK V+ L+ + + G + +S G V+++G G+ LGH +
Sbjct: 656 GGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS 709
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 217
LS G F WG++ R G P + P P L L+ I Q+ G L +
Sbjct: 1399 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1454
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ V++ G G GG+LG GS P LIE Q +++ V V AG H + +
Sbjct: 1455 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1511
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V +WG G G LGHGN P+++++L + VATG + ++ G +Y++G
Sbjct: 1512 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1571
Query: 338 GESASLGHNAIAD 350
G LGH D
Sbjct: 1572 GRYGRLGHEDSED 1584
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H IA G VY++G N GQ+G GTT+ PR + +LQG I + G+ T+
Sbjct: 1715 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1772
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G V+++G N GQ G+G T +P ++ L+G++I + A G+ ++
Sbjct: 733 GALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792
Query: 111 SDAGQ 115
+D
Sbjct: 793 ADTSH 797
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
GL K G KH + L L+ V G+ V G+V G G L
Sbjct: 435 GLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 494
Query: 292 GHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
G G SV ++ Q L +K + V +G ++ DG VYS+G GE LGH + A
Sbjct: 495 GLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRA 553
Query: 350 DG 351
D
Sbjct: 554 DA 555
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 22/334 (6%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGV------------VYSFGSNSSGQLGHGTTEEEW 84
G+A R +Q A GH I + G VYS+G G+LGHG + +
Sbjct: 43 GDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLL 102
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+PI++L G++I Q A G + ++ G+V ++G++ G+ G LV PQ ++
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 160
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+ + I + A G TA ++ +G ++ + WG LG + + P + +++ +
Sbjct: 161 AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQK-VSSVDGDKM 219
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V +A G+ + ++++ S +Y+ G G+LGHG D P +E + N+ +
Sbjct: 220 VMVACGWRHTISVS---SLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQI-- 274
Query: 265 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+G W H + DG++ WGW ++G +G G+ P ++ D K I ++ G T
Sbjct: 275 -SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHT 333
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
V++ +V+S+G G + LGH D +L
Sbjct: 334 LAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 367
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ +GI I AAGA
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEH 176
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G+++ +G +G G + +LV PQ V S+ +V A G T +S
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSS 234
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L + QI+ G+ + +AL +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---L 290
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + Q V+ + W H V V +WG
Sbjct: 291 YGWGWNKFGQVGAGDNIDHCSPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGR 347
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG + P +++AL+
Sbjct: 348 GTNGQLGHGESVDRNTPMILEALS 371
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 6 PVR-----RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALD 58
Query: 148 NIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+V G + TA VY++ WG+ RLGH + + P P+ L + + Q
Sbjct: 59 GHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK-ALHGLKIRQ 117
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
IA G + LA+ + V S G G+LG G+ D P+ I+ F+ ++++ +VAA
Sbjct: 118 IACGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIK--MVAA 172
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA H A V +DG + WGWGRYG LG G+ VP+ V +++ K + VA G T V
Sbjct: 173 GAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 232
Query: 327 SEDGDVYSFGCGESASLGHNAIAD 350
S G +Y++G + LGH D
Sbjct: 233 SSLGGLYTYGWSKYGQLGHGDFED 256
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P Q L+ +V
Sbjct: 10 VLFISAGASHSVALL---SGNIVCSWGRGEDGQLGHGDAEDRLSP---TQLSALDGHEIV 63
Query: 264 -VAAGAWHAAVVG-QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
V GA H V +WGWG +G LGHGN PK ++AL+ +K +A GD
Sbjct: 64 SVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDS 123
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 124 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV 155
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 260
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V+++ G V++FG G LGH+++ D
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVND 281
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 149/295 (50%), Gaps = 9/295 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 66 GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 125
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 126 VTXEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKXVAAGAEHTAAVTEDGD 183
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T +A G+ + ++++ A+Y+
Sbjct: 184 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKXSXVACGWRHTISVSYSG---ALYTY 239
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LGHG D P +E L N ++ GA H + DG++ WGW ++G
Sbjct: 240 GWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQISGGARHTXALTSDGKLYGWGWNKFG 297
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 298 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 13 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 72
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 73 YSQSGXEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTXEG 130
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 131 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKXVAAGAEHTAAVTEDGD---LYG 186
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + VA G H V G + T+GW +Y
Sbjct: 187 WGWGRYGNLGLGDRTDRLVPERVTSTG--GEKXSXVACGWRHTISVSYSGALYTYGWSKY 244
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 245 GQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVG 300
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEH 174
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S A G T +S
Sbjct: 175 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSY 232
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G + AL S +
Sbjct: 233 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALT---SDGKL 288
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 289 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 345
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 346 GTNGQLGIGESVDRNFPKIIEALS 369
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 7 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 64
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 65 CGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 123
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ VAAGA H A V
Sbjct: 124 LAVTXEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--XVAAGAEHTAAV 178
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 239 YGWSKYGQLGHGDLED 254
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 8 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 62
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 63 VTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 122
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 123 CLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV 153
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H+ A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 262 EALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 321
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 322 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 368
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH + E +P PI +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRV-KSLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 287 RYGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 12/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + +G+K P+ + +L +V A G + LS +G+V+++ G+D +LG
Sbjct: 64 GQLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
T + V L+ L ++QI+ G + LALA + ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+ ++ + L VAAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPL--AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
VA G H+ + +DG V T G G LGH +E S P+ + AL +HVA G+ +
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEG--SKPEPIGALAGQHIVHVACGESHS 96
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADG 351
+S+ G V+S+G G LG I D
Sbjct: 97 VALSDQGQVFSWGAGSDGQLGLTTIEDA 124
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ ++D
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDK 102
Query: 114 GQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
GQVYA+G DS + + G+QG++ + P+ ++SL +I +VQ A G + + LS+ V+
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 230
+ +LG + L+ +L IP +Q+AAG + ++L L+ A++ G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG D P L++ L + + V + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGH + E P+ V L VA G +T+ V G +YSFG G + LG + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 350 D 350
+
Sbjct: 334 N 334
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG + N L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+S+G N GQLG G +
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+S G G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCN 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ L + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
VY+ GC G+LGH EK + EQ L+ Q +V V+ G H + G+V W
Sbjct: 54 TVYTCGCNDLGQLGH-----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAW 108
Query: 284 GWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G LG G+EEC VP+ +++L+D++ + VA G Y + +S+ +V+S+G +
Sbjct: 109 GLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQ 168
Query: 343 LGHNAIADGQVCSLLFLSI 361
LG + Q L S+
Sbjct: 169 LGLGIDCNKQASPQLIKSL 187
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P I SL +R IQ G ++ G++YA G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V++P L+ES++++ + + A+ G LS EG VY++ G D
Sbjct: 3241 GASGR--LGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L V+ IA G + AC S +Y+ G G G+LGH
Sbjct: 3299 KLGHGNRTQCDRPR-VIESLRGKEVIDIACGGAHS---ACVTSSGELYTWGKGRYGRLGH 3354
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P++ + + + V +G + D V +WG G YG LG G +
Sbjct: 3355 GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGC 3414
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP+ V AL+ + V G + +++ G VY++G G+ LGH +
Sbjct: 3415 KVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGS 3462
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 154/316 (48%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G AVT+ G +Y+ G +SG+LG G T+ P + S+Q + I + A +G
Sbjct: 3218 QIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGG 3277
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ V+ A G +A +
Sbjct: 3278 KHALALSVEGEVYSWGEGEDGKLGHGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACV 3335
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P + L+ V+ +A G L C
Sbjct: 3336 TSSGELYTWGKGRYGRLGHGDSEDQLRPK-MADALKGYRVIDVACGSGDSQTL-CISDDD 3393
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P+ ++ + + V G+ + + + G V TWG
Sbjct: 3394 NVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGV--CKVECGSQFSIALTKSGCVYTWG 3451
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ V AL K I +ATG S+ G+VY++G + LG
Sbjct: 3452 KGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 3512 DGTTNAIQRPRIVTAL 3527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A++ +G VYS+G G+LGHG + RPR I SL+G +I A G +
Sbjct: 3275 SGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSAC 3334
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ +G++Y +GK +G +G +L P++ ++LK V+ A G+ T +S +
Sbjct: 3335 VTSSGELYTWGKGRYGRLGHGDSEDQL--RPKMADALKGYRVIDVACGSGDSQTLCISDD 3392
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + L +I V ++ G + +AL SG VY
Sbjct: 3393 DNVWSWGDGDYGKLGRGGSDGCKVPQK-VDALSSIGVCKVECGSQFSIALT--KSG-CVY 3448
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR + Q + + +A G+ H G V TWG
Sbjct: 3449 TWGKGDYHRLGHGSDDHVRRPRKVAALQGKKI--ISIATGSLHCVACSDQGEVYTWGDND 3506
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G P++V AL D K +VA G T S +++ ++ + +N
Sbjct: 3507 EGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLHAGRLPQTVPMEYNL 3566
Query: 348 IAD 350
+ +
Sbjct: 3567 LRE 3569
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRTMLISDAGQ 115
VT++G VY+ G ++G+LG G+++ P+ + L ++ + +G M ++ G+
Sbjct: 2254 VTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGK 2313
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+++G+ G+ G P+L+E+LK + A G+ +A ++ G +YT+
Sbjct: 2314 VFSWGEGDDGK--LGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGL 2371
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G RLGH + P L+ L V+Q+A G L GM VYS G G G
Sbjct: 2372 GEYGRLGHGDSTTQLRPK-LVKALVGKRVIQVACGSRDAQTLTLTDEGM-VYSWGDGDFG 2429
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
KLG G P +E+ LN Q V+ + GA + + + G+V TWG G Y LGHG
Sbjct: 2430 KLGRGGSEGCSVPHNVER---LNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHG 2486
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ P+V + L K IHVA G V++ G V+++G
Sbjct: 2487 TDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWG 2528
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR + +L+ RI A G+ +
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P+LV++L V+Q A G + T L+ E
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQL--RPKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG PH + L V+QI G + LAL V+
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHN-VERLNGQGVIQIECGAQFSLALT---KAGQVW 2473
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + + P++ E + + + VA GA H V G+V WG
Sbjct: 2474 TWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKI--IHVAVGALHCLAVTDTGQVFAWGDND 2531
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G G+ P +VQ L V+ VA G
Sbjct: 2532 HGQQGDGSTTVNKKPALVQGLEGVRITRVACG 2563
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 122/224 (54%), Gaps = 10/224 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS AVTS G +Y++G G+LGHG + + RP+ +++L G R+IQ A G+ +T+
Sbjct: 2353 GSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL 2412
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G VY++G FG + G G++ + P VE L V+Q G F+ L++ G
Sbjct: 2413 TLTDEGMVYSWGDGDFG--KLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAG 2470
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V+T+ G+ RLGH T+ + +P G L+ ++ +A G + LA+ V++
Sbjct: 2471 QVWTWGKGDYFRLGHGTDSHVRKPQVAEG-LKGKKIIHVAVGALHCLAVT---DTGQVFA 2526
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
G G+ G GS T K P L++ + + + VA G+ H+
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRI--TRVACGSSHST 2568
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P L ++++ A G+ +++ G+VYA G+ +
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ ++ V P+ V L V + A+ G L+ +G+V+++ G+D +L
Sbjct: 2268 NGR--LGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2325
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + N +P LL L+ + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 2326 GHLSRMNCEKPR-LLEALKTKRIRDIACGSSHSAAVT---SSGELYTWGLGEYGRLGHGD 2381
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
T + P+L++ L+ + + VA G+ A + +G V +WG G +G LG G E
Sbjct: 2382 STTQLRPKLVKA--LVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGC 2439
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
SVP V+ LN I + G + +++ G V+++G G+ LGH
Sbjct: 2440 SVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 164 LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
++R +T SWG + GH+ E V+ + +L ++ +QI G
Sbjct: 3166 MNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQT 3225
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L A+ +Y+ G G G+LG G P L+E Q ++++ V V +G HA
Sbjct: 3226 LFAVTADGK---LYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ +G V +WG G G LGHGN P+V+++L + I +A G + V+ G++Y
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELY 3342
Query: 334 SFGCGESASLGHNAIAD 350
++G G LGH D
Sbjct: 3343 TWGKGRYGRLGHGDSED 3359
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 165 SREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
SRE + F WG ND + ++ L L ++ VV A G L + +
Sbjct: 2201 SREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGK- 2259
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LG GS + P+ + ++ V V +G HA + DG+V +W
Sbjct: 2260 --VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317
Query: 284 GWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G G LGH CE P++++AL + +A G + V+ G++Y++G GE
Sbjct: 2318 GEGDDGKLGHLSRMNCEK-PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Query: 343 LGH 345
LGH
Sbjct: 2377 LGH 2379
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHGT +P+ L+G +II A GA
Sbjct: 2455 QIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALH 2514
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQV+A+G + G+ G T + P LV+ L+ + + + A G+
Sbjct: 2515 CLAVTDTGQVFAWGDNDHGQQGDG--STTVNKKPALVQGLEGVRITRVACGS 2564
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 79 TTEEEWRPRPIRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGE-AEYGVQGTK 135
++++ P+ + L+ + + A G+ G+T+ ++D G +++FG +G+ G G K
Sbjct: 1 NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCK 60
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY---TFSWGNDA 179
L P+LV+ L+ V A GN F+ +L++ G VY TF+W + A
Sbjct: 61 L---PKLVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSA 104
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G ++AVT G+++SFG+ G+LG G ++ P+ + LQG + A G +++++
Sbjct: 29 GQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCGNQFSVILTK 88
Query: 113 AGQVYA 118
G VY
Sbjct: 89 TGTVYT 94
>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
variabilis]
Length = 272
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 143/278 (51%), Gaps = 12/278 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ FG GQLG G+TE+ + PR ++ L+ ++ AAGA T ++ G++Y G +
Sbjct: 2 VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
E++ GV+ +P V +L+ V + A G T + G V F ++G
Sbjct: 62 --ESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
VE ++ L ++ +V++AAG + LAL+ S V+S G G G LG G+
Sbjct: 120 GPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALS---STGGVFSCGNGSFGALGRGTTE 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-----GHGNEEC 298
PR I + L + V +A G H+A + DGRV TWG G++ L GHG+ E
Sbjct: 177 GNDVPRPISRLWPLGV--VQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
S PK VQAL + V+ GD T +++EDG VY++G
Sbjct: 235 CSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 17/276 (6%)
Query: 16 RQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
R D+ Q GS + V L + R+ AG H+ AVTS G +Y GSN QL
Sbjct: 7 RGDMGQLGDGSTEDVFVPRLV-KGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQL 65
Query: 76 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
G + P + +L+ ++ + A G T+ + D G V AFG +G+ G G +
Sbjct: 66 GVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGAR 125
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
V P++V+ L+++ +V+ A G T LS G V++ G+ LG TE NDV P P
Sbjct: 126 -VELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDV-PRP 183
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL-----GHGSRTDEKHPR 249
+ L + VVQIA G + A+ V + G G L GHG + P+
Sbjct: 184 -ISRLWPLGVVQIACGENHSAAITADGR---VLTWGRGKHRLLPAFHCGHGDFENCSTPK 239
Query: 250 LIEQFQ-LLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++ + ++ Q V+ G H ++ +DG V WG
Sbjct: 240 PVQALKGIVGRQ---VSCGDDHTVLLTEDGSVYAWG 272
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 9/226 (3%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ FG+ G+ G T+ V P+LV+ LK+ VV A G TA ++ +G +Y
Sbjct: 1 EVWVFGRGDMGQ--LGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+++LG + + P + LE V ++A G + LA+ G AV + G
Sbjct: 59 SNEESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVV---DGGAVAAFGSAEY 114
Query: 235 GKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G++G G + PR+++ + +++ V VAAG H + G V + G G +G LG
Sbjct: 115 GQVGLGPCGARVELPRVVKDLRSMHI--VRVAAGGSHTLALSSTGGVFSCGNGSFGALGR 172
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G E VP+ + L + + +A G+ + ++ DG V ++G G+
Sbjct: 173 GTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGK 218
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 157/316 (49%), Gaps = 23/316 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E CC G HS +T G + +G GQLG G ++ PR + S++ +
Sbjct: 46 EVCC---------GGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIK--NV 94
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQ 153
I + + I + G++Y +G + G+ G ++ +PQLVE L N V++
Sbjct: 95 INVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIK 154
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G+F TA L+ + YT+ G RLGH + NDV L+ +L + V I G +
Sbjct: 155 VSCGSFHTACLTDLNKAYTWGLGMQGRLGH-GDTNDVYTPKLIESLAGLSVKNIVCGGHH 213
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L + VY G G GKLG GS+ D P+L+ Q L N V+ G H+AV
Sbjct: 214 TAILL---NNGKVYFCGGGAFGKLGFGSKEDIYIPKLL-QGSLTNKSIKEVSLGYQHSAV 269
Query: 274 VGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ G+V TWG G R G + +G E PK+V+ LN + A++++ G T V+S GDV
Sbjct: 270 ITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDV 329
Query: 333 YSFGCGESASLGHNAI 348
Y++G + +LGH I
Sbjct: 330 YAWGV--TRNLGHGVI 343
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 20/293 (6%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAF 119
K V ++GS+ GQLG E P+ I SL RI + G + +I+ +G++ +
Sbjct: 7 KSGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVW 66
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
G G + G+ K + P+++ S+KN V+ + + +A + +GR+YT+
Sbjct: 67 GYGGCG--QLGLGDLKDIVIPRVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKSG 122
Query: 180 RLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+LG + P L+ L N V++++ G + AC Y+ G G+
Sbjct: 123 KLGIGSLNVNLNNNIICTPQ-LVEKLLNEKVIKVSCGSFH---TACLTDLNKAYTWGLGM 178
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LGHG D P+LIE L+++ +V G H A++ +G+V G G +G LG
Sbjct: 179 QGRLGHGDTNDVYTPKLIESLAGLSVKNIV--CGGHHTAILLNNGKVYFCGGGAFGKLGF 236
Query: 294 GNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G++E +PK++Q +L + V+ G + V++ G VY++G G LGH
Sbjct: 237 GSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGH 287
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 32/252 (12%)
Query: 123 SFGEAEYGVQGTKLVTS---PQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGND 178
++G +EYG G S P+L+ESL + + + G +AV++ G + + +G
Sbjct: 12 AWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGC 71
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGC 231
+LG LG L++I + ++ ++ ++C A +Y+ GC
Sbjct: 72 GQLG-------------LGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGC 118
Query: 232 GLGGKLGHGSRTDEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
GKLG GS + P+L+E+ LLN + + V+ G++H A + + TWG
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEK--LLNEKVIKVSCGSFHTACLTDLNKAYTWGL 176
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHG+ PK++++L + ++ G + T ++ +G VY G G LG
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF 236
Query: 346 NAIADGQVCSLL 357
+ D + LL
Sbjct: 237 GSKEDIYIPKLL 248
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ ++D
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDK 102
Query: 114 GQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
GQVYA+G DS + + G+QG++ + P+ ++SL +I +VQ A G + + LS+ V+
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 230
+ +LG E L+ +L IP +Q+AAG + ++L L+ A++ G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG D P L++ L + + V + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGH + E P+ V L +A G +T+ V G +YSFG G + LG + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 350 D 350
+
Sbjct: 334 N 334
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 123
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 124 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 181
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T + +A G+ + ++++ A+Y+
Sbjct: 182 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSYSG---ALYTY 237
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LGHG D P +E L N ++ G H + DG++ WGW ++G
Sbjct: 238 GWSKYGQLGHGDLEDHLIPHKLE--ALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFG 295
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 296 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALT---SDGKL 286
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 11 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 71 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVG 298
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 237 YGWSKYGQLGHGDLED 252
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 6 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 60
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 120
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 121 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 151
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 260 EALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 123
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 124 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 181
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T + +A G+ + ++++ A+Y+
Sbjct: 182 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSYSG---ALYTY 237
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LGHG D P +E L N ++ G H + DG++ WGW ++G
Sbjct: 238 GWSKYGQLGHGDLEDHLIPHKLE--ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 295
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 296 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 286
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 11 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 71 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 298
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 237 YGWSKYGQLGHGDLED 252
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 6 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 60
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 120
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 121 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 151
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 260 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 51 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 108
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 109 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 166
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 167 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 222 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 339
Query: 347 AIAD 350
+ ++
Sbjct: 340 STSN 343
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 73 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 128
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 185
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 186 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 243
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 244 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 150 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 209
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 210 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 267
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 324
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 325 IYSFGLGGNGQLGTGSTSNRKSP 347
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 203 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 262
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 263 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 320
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 321 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 353
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 150/305 (49%), Gaps = 9/305 (2%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
C E G H++ V G V S G+N GQLGH + RP I SL ++QA
Sbjct: 42 CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCK--RPALIDSLGERNVLQA 99
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
++G + +++DAGQV+ +G + + G + + P++V L + VVQ A G+
Sbjct: 100 SSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAH 159
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G++YT+ N +LG + EP + + +P+V++AAG + L L
Sbjct: 160 TVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQ-WVSCISGLPIVRVAAGADHNLVLTI- 217
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
SG A+++ GC G+LG G D P L++ L N +A G H+ + +DG V
Sbjct: 218 -SG-ALFAWGCNSFGQLGVGDDQDRGAPTLVKT--LRNQGICALACGDDHSLALTRDGGV 273
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
T+G G YG LGH E +P+ V L +A G ++ V G VY FG G
Sbjct: 274 FTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGG 333
Query: 340 SASLG 344
+ LG
Sbjct: 334 NGQLG 338
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 14/291 (4%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
K V +GS + GQLG G EEE PR IRS + ++ A G T+ + G+V +
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G + +G+ + K P L++SL V+QA+ G + VL+ G+V+T+ D
Sbjct: 68 CGNNDYGQLGH----EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNED 123
Query: 179 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+LG + ++ L + VVQ+A G + + L + +Y+ G G+L
Sbjct: 124 NQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT---ATGQIYTWGSNNHGQL 180
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G ++T + P+ + L P+V VAAGA H V+ G + WG +G LG G++
Sbjct: 181 GLANKTPQNEPQWVSCISGL---PIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDD 237
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ P +V+ L + +A GD + ++ DG V++FG G LGHN
Sbjct: 238 QDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 6/230 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G +Y++GSN+ GQLG + P+ + + G+ I++ AAGA
Sbjct: 152 QVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADH 211
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++++ +G ++A+G +SFG + GV + +P LV++L+N + A G+ + L+R
Sbjct: 212 NLVLTISGALFAWGCNSFG--QLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTR 269
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+TF G +LGH+T N++ P + L V QIA G + ++A PS V
Sbjct: 270 DGGVFTFGAGMYGQLGHNTSNNELLPRKVF-ELMGSSVTQIACGRKH--SIAYVPSSGRV 326
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
Y G G G+LG GS + P +++ + VV GA H + GQ
Sbjct: 327 YVFGLGGNGQLGTGSTVNRMSPAMVKG-PFVAFGAEVVDKGAIHFSQHGQ 375
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 11/296 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 76 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 135
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 136 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 193
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T + +A G+ + ++++ A+Y+
Sbjct: 194 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSYSG---ALYTY 249
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E + + +G W H + DG++ WGW ++
Sbjct: 250 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI---SGGWRHTMALTSDGKLYGWGWNKF 306
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 307 GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 362
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 184
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 242
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 243 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 298
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 299 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 355
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 356 GTNGQLGIGESVDRNFPKIIEALS 379
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 23 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 82
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 83 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 140
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 196
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 254
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 310
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 74
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 75 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 133
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 134 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 188
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 249 YGWSKYGQLGHGDLED 264
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 18 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 72
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 73 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 132
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 133 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 163
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 272 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 331
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 332 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 378
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 26/311 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
S +AG +S+A+ G ++++G N G LGH T+ E P P+ +L G++I+QAA G
Sbjct: 44 SAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGG 103
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAI 156
+ + D G+ YA+G + +G E E GT+ + +PQ +LK + V Q A
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRC-ALK-LKVQQVAA 161
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 215
G + VL++EG V+T+ G P D++ ++ + V+ IA G + L
Sbjct: 162 GGTHSVVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNL 213
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 ALS---EDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSL--VDIAAGGWHSTALT 268
Query: 276 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG V WG G +G LG G+++ VP VQ L+ + V+ G + ++ DG ++S
Sbjct: 269 KDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFS 328
Query: 335 FGCGESASLGH 345
+G G+ LG+
Sbjct: 329 YGRGDHGRLGY 339
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A++ V++++G+N GQLG G T+ +P + L G+ ++ AAG + ++
Sbjct: 211 HNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKD 270
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G +G + + P V+ L +VQ + G + L+ +GR++++
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMV-PLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSY 329
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
G+ RLG+ + HP+ L N+P + +AG
Sbjct: 330 GRGDHGRLGYGRKVT--TGHPMEVPL-NLPPPKTSAG 363
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 9/239 (3%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
L+S G VY +G + FG+ G ++L + P + L N+FVV A+ G T +LS+EG
Sbjct: 7 LVSGLGDVYTWGANFFGQ--LGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKEG 63
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V++F G + RLGH N P P+ +LE+ + IAAG+ + +A+ +++
Sbjct: 64 KVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAIDDDGK---LFT 119
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
GCG G+LGHG+ D PR +++ + ++ ++ + H+AV ++G V TWG G +
Sbjct: 120 WGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEH 179
Query: 289 GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G+ E P +V+++ D + + V+ G T V+ DG + ++G G+ LGH
Sbjct: 180 GQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGH 238
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ V+ G VY++G+N GQLG + P + L + ++ A+ G T+L+
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLL 59
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S G+V++FG + G +G + + PQ + SL++ + A G + + +G++
Sbjct: 60 SKEGKVFSFGDGANGRLGHG--NCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKL 117
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+T+ GN RLGH + P + L I + + A Y + C +G V++ G
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPR-FVDRLYRIRMKAMMASGSYDHSAVCCENG-TVWTWG 175
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G G+LG GS P L++ NL V V+ G H A V DG + TWG G +G
Sbjct: 176 LGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQ 235
Query: 291 LGHGN 295
LGHGN
Sbjct: 236 LGHGN 240
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 8/198 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
A G H++ ++ +G V+SFG ++G+LGHG P+PI SL+ RI AAG
Sbjct: 48 SASCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTH 107
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV-VQAAIGNF-FTAVL 164
+M I D G+++ +G + G +G V P+ V+ L I + A G++ +AV
Sbjct: 108 SMAIDDDGKLFTWGCGNAGRLGHG--NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC 165
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSG 223
G V+T+ G +LG + + +EP + + N+ +V+++ G + A+ +
Sbjct: 166 CENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGT- 224
Query: 224 MAVYSVGCGLGGKLGHGS 241
+ + G G G+LGHG+
Sbjct: 225 --LLTWGRGDWGQLGHGN 240
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VY+ G G+LG R + L + L N+ V + G H ++ ++G+V ++G
Sbjct: 14 VYTWGANFFGQLG---RDYSRLWSLPSELHLPNVFVVSASCGGMHTLLLSKEGKVFSFGD 70
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHGN S+P+ + +L + +A G + + +DG ++++GCG + LGH
Sbjct: 71 GANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGH 130
Query: 346 NAIAD 350
+ D
Sbjct: 131 GNVLD 135
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 12/328 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S VV S+G GQLGHG T++ P + +L G II GA TM
Sbjct: 21 AGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMA 80
Query: 110 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++G+ VY++G FG +G L+ P +++L+ + + Q A G+ ++ +
Sbjct: 81 RSESGRDVYSWGWGDFGRLGHGDHSDLLI--PHPIKALQGLMIQQIACGDSHCLAVTMDS 138
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V ++ + LG T + + P + E IP+ +AAG + +A+ + +Y
Sbjct: 139 QVLSWGRNQNGELGLGTAEDSLLPQKIQ-IFEEIPIKMVAAGAEHSVAITKDGN---LYG 194
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P E+ + + +VA G H V G + T GWG+Y
Sbjct: 195 WGWGRYGNLGLGDRNDRLLP---EKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ E VP+ VQAL+D V+ G + ++ G + +G + +G
Sbjct: 252 GQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNN 311
Query: 349 ADGQVCSLLFLSIFQYLQIWLNLSSYRH 376
D CS + ++ ++ + +RH
Sbjct: 312 FD--CCSPMQVNFPHDQKVQMISCGWRH 337
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 12/309 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G VYS+G G+LGHG + P PI++LQG+ I Q A G +
Sbjct: 74 GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLA 133
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ QV ++G++ GE G L+ PQ ++ + I + A G + ++++G
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLL--PQKIQIFEEIPIKMVAAGAEHSVAITKDGN 191
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T++ + +A G+ + + C S +Y+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKV--TVDGDKMAMVACGWRHTI---CVSSSGGLYTN 246
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G G+LGHG D PR + Q L+ + + +G W H+ + G++ WGW ++
Sbjct: 247 GWGKYGQLGHGDFEDHLVPR---KVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKF 303
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G +G GN P V +D K ++ G T V+E +VYS+G G + LG+
Sbjct: 304 GQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGET 363
Query: 349 ADGQVCSLL 357
D V +++
Sbjct: 364 IDRNVPTII 372
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT V S+G N +G+LG GT E+ P+ I+ + I I AAGA
Sbjct: 123 QIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I+ G +Y +G +G G + +L+ V+ K V A G T +S
Sbjct: 183 SVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMV---ACGWRHTICVSS 239
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT WG +LGH + + P + L + + Q++ G+ + +AL S +
Sbjct: 240 SGGLYTNGWGKYGQLGHGDFEDHLVPRKVQ-ALSDKFISQVSGGWRHSMALT---SSGQL 295
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
G G++G G+ D P Q + Q V + + W H V + V +WG
Sbjct: 296 LGWGWNKFGQIGVGNNFDCCSPM---QVNFPHDQKVQMISCGWRHTIAVTERENVYSWGR 352
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG+G +VP +++A +
Sbjct: 353 GANGQLGNGETIDRNVPTIIEAFS 376
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
++V+AGA H+ + VC+WG G G LGHG+ + P + AL+ I V G
Sbjct: 17 LLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGAD 76
Query: 322 TTFVVSEDG-DVYSFGCGESASLGHNAIAD 350
T SE G DVYS+G G+ LGH +D
Sbjct: 77 HTMARSESGRDVYSWGWGDFGRLGHGDHSD 106
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 11/296 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T + +A G+ + ++++ SG A+Y+
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSY--SG-ALYTY 248
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E + + +G W H + DG++ WGW ++
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI---SGGWRHTMALTSDGKLYGWGWNKF 305
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 306 GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 248 YGWSKYGQLGHGDLED 263
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 17 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 71
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 131
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 132 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 162
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 18/291 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 3844 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901
Query: 180 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 3902 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 3952
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG D+ P+LIE Q + V +G V D V +WG G YG LG G
Sbjct: 3953 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4013 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH 4063
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 150/300 (50%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGK 2887
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 2888 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 2945
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH +P L+ +L V+QIA G +A G+
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRVIQIACGSRDAQTMALTADGL- 3003
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3004 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3061
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G + G+
Sbjct: 3062 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGN 3121
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3821 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 3880
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 3881 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 3938
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 3939 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 3996
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4054
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG +L + LQ
Sbjct: 4115 -----DGTTSALQRPRLVHALQ 4131
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG + +PR I SL+ RI A G+G +
Sbjct: 2884 SGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA 2943
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+ + P+LV+SL V+Q A G + T L+ +
Sbjct: 2944 ITSSGELYTWGLGEYGRLGHGDTATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTAD 3001
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + VVQI G + LAL V+
Sbjct: 3002 GLVYSWGDGDFGKLGRGGSDGCYTPL-LIDRLNGLGVVQIECGAQFSLALT---KYGEVW 3057
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + + VA GA H V G+V WG
Sbjct: 3058 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQVYAWGDND 3115
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L+D + V+ G
Sbjct: 3116 HGQQGNGTTIVNKKPSLVHELDDARVNRVSCG 3147
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E L + V A G+ V+S+EG++Y
Sbjct: 2792 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2846
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + RLG + N EP P + L + ++A ALA G V+S G G
Sbjct: 2847 CGEGTNGRLGLGDDSNVCEPKP-IPFLSQYVIKKVAVHSGGKHALALTQDG-KVFSWGEG 2904
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 2905 EDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 2962
Query: 293 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG+ +S PK+VQ+L + I +A G D T ++ DG VYS+G G+ LG +D
Sbjct: 2963 HGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-SD 3021
Query: 351 GQVCSLLF 358
G LL
Sbjct: 3022 GCYTPLLI 3029
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 3878 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L +P+L+E+L++ V+ A G+ T ++ +
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 3995
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVIKVECGSQFSVALT--RSG-AIY 4051
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4052 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4109
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4110 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4146
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 123/281 (43%), Gaps = 15/281 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
I ++ G VY S Q +G +E + I +I + + + ++
Sbjct: 474 IILSVNGNVYMMYYGSETQRVYGFSE-----------KPITMIASHSDGTHYLALTQDNS 522
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VY++G G +G P+L+E+L + A G+ ++A LS G +YT+
Sbjct: 523 VYSWGNGECGRLGHG--NMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGR 580
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
GN +LGH DV L+ L VV +A G C + V+S G G G
Sbjct: 581 GNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHG 640
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
KLG G K P+++++ LL++ V G +A + G V TWG G LGHGN
Sbjct: 641 KLGRGGCDGSKTPKIVDK--LLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGN 698
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
E+ PK++ L K + G ++ED VY +G
Sbjct: 699 EDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
SP +++ + + Q +LS G VY +G+ E + G
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGS-------------ETQRVYGF 497
Query: 199 LENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
E P+ IA+ + LAL S VYS G G G+LGHG+ T P+LIE
Sbjct: 498 SEK-PITMIASHSDGTHYLALTQDNS---VYSWGNGECGRLGHGNMTWYDEPKLIEALVE 553
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIH 315
N+ +A G+ ++A + +G + TWG G YG LGHGN + + +P +V ALN ++
Sbjct: 554 KNI--TFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVY 611
Query: 316 VATG---DYTTFVVSEDGDVYSFGCGESASLG 344
VA G D T V+ G V+S+G G LG
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWGDGNHGKLG 643
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIR 96
EA + + G +S A++S G +Y++G + G+LGHG ++++ P + +L G
Sbjct: 549 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHM 608
Query: 97 IIQAAAGAGR---TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVV 152
++ A G GR T+ ++ +G V+++G + G+ G G+K +P++V+ L +I V
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSK---TPKIVDKLLDINVA 665
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ G F+A L+ G VYT+ G D +LGH E + P ++ L+ + + G+
Sbjct: 666 KVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPK-IIDILKTKKIKDLYIGHL 724
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL--------QPVVV 264
++LAL VY G G++ T P L F N+ Q
Sbjct: 725 HVLALT---EDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAW 781
Query: 265 AAGAWHAA-VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
AW A V +C + L N+ CE +P D + + VAT +
Sbjct: 782 CTAAWSVANRVAFVVDICEETFRLLDTL--LNKACEGLPSTRPPTQDRECLAVATLNLIR 839
Query: 324 F----VVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
+++ + D S G + L N++ Q C +L SI
Sbjct: 840 LQLHTMITHNIDSKSVGLANTPLL--NSLK--QRCVMLASSI 877
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG P+ I +L I A G+ + +S
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRV 170
G++Y +G+ ++G+ +G K V P LV +L VV A G + T ++ G V
Sbjct: 573 GELYTWGRGNYGKLGHG-NSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIV 631
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 632 FSWGDGNHGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGQQFSAALTAYGE---VYTWG 687
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G KLGHG+ ++P++I+ + ++ + + G H + +D V +GWGR
Sbjct: 688 KGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLV--YGWGR 740
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3777 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 3833
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3834 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 3953 GRLGHGDSED 3962
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+++ VY++ G RLGH EP L+ L + IA G Y AL+ S
Sbjct: 517 LTQDNSVYSWGNGECGRLGHGNMTWYDEPK-LIEALVEKNITFIACGSTYSAALS---SN 572
Query: 224 MAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV-VAAGAW---HAAVVGQDG 278
+Y+ G G GKLGHG S D P L+ LN VV VA G V G
Sbjct: 573 GELYTWGRGNYGKLGHGNSDKDVMIPTLVTA---LNGHMVVYVACGGGRDPQTLCVTASG 629
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +WG G +G LG G + PK+V L D+ V G + ++ G+VY++G G
Sbjct: 630 IVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKG 689
Query: 339 ESASLGH 345
E LGH
Sbjct: 690 EDYKLGH 696
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +II A GA
Sbjct: 3039 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3098
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3099 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3148
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + QD V +WG G G LGHGN PK+++AL + +A G + +S +
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572
Query: 330 GDVYSFGCGESASLGH-NAIADGQVCSLL 357
G++Y++G G LGH N+ D + +L+
Sbjct: 573 GELYTWGRGNYGKLGHGNSDKDVMIPTLV 601
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
Q V WG LG +P + L+ +K +H+A G T FVVS++G +Y+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847
Query: 336 GCGESASLGHNAIADGQVCS---LLFLSIF 362
G G + LG D VC + FLS +
Sbjct: 2848 GEGTNGRLGLG--DDSNVCEPKPIPFLSQY 2875
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P + L R+ + + G+ ++
Sbjct: 3095 GALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSI 3152
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 3956 GAVGR--LGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P L+ L +V +A G + A+ S +Y+ G G G+LGH
Sbjct: 4014 KLGHGNRLSYDRPK-LIEELLGTEIVDVACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4069
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + V +G V D V +WG G YG LG G +
Sbjct: 4070 GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4129
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4130 KVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGH 4175
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3933 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGG 3992
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 3993 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAI 4050
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4051 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4108
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVIKVECGSQFSVALTRSGSIYTWG 4166
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG C+L + LQ
Sbjct: 4227 -----DGTTCALQRPRLVHALQ 4243
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 8/340 (2%)
Query: 20 KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
K + GG ++ + E+ + + G V+ +G +Y+ G ++G+LG G
Sbjct: 2919 KDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGD 2978
Query: 80 TEEEWRPRPIRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
P+PI L I+ + +G + ++ G+V+++G+ G+ +G +
Sbjct: 2979 DGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHG--NCSSL 3036
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P+L+ESLK+ + A G+ +A ++ G +YT+ G RLGH ++P L+
Sbjct: 3037 DKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPK-LVQ 3095
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
+L V+Q+A G +A G +VYS G G GKLG G P L+++ L
Sbjct: 3096 SLVGQRVIQVACGSRDAQTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGL 3154
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ V + GA + + + G V TWG G Y LGHGN+ P +V+ L K IHVA
Sbjct: 3155 GV--VQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVA 3212
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
G V++ G VY++G + G+ + + SL+
Sbjct: 3213 VGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLV 3252
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR I SL+ RI A G+G +
Sbjct: 3003 SGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAA 3062
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P+LV+SL V+Q A G + T L+ +
Sbjct: 3063 ITSSGELYTWGLGEYGRLGHGDTNTQL--KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3120
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + VVQI G + LAL V+
Sbjct: 3121 GSVYSWGDGDFGKLGRGGSDGCYTPL-LVDRLNGLGVVQIECGAQFSLALT---KYGEVW 3176
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + + VA GA H V G+V WG
Sbjct: 3177 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDND 3234
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G+ P +V L+D + V+ G
Sbjct: 3235 HGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3266
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 3990 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G+ T ++ +
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4107
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL S +Y
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVIKVECGSQFSVALTRSGS---IY 4163
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4164 TWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI--ISIATGSLHCVACSDKGEVFTWGDND 4221
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4222 EGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLAWS 4261
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +++ VY++G G +G + P+L+ESL + + A G+ ++A LS
Sbjct: 519 LALTEDSSVYSWGNGDGGRLGHGDR--TWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G +YT+ GN RLGH +DV L+ L +V +A G L SG+ V+
Sbjct: 577 GELYTWGRGNYGRLGHGNS-DDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI-VF 634
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G GKLG G K P+++++ LL++ V G +A + G V TWG G
Sbjct: 635 SWGDGDYGKLGRGGCNGSKTPKIVDK--LLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 692
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGHGNEE PK ++AL K + G ++ED VY +G
Sbjct: 693 AYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWG 741
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 114/228 (50%), Gaps = 26/228 (11%)
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++G ++G G+ SP +++ + + Q +LS G VY +G++ +
Sbjct: 440 AWGSVKFGGTGS----SPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGSETQY- 494
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
P + G + V IA+ G Y LAL S VYS G G GG+LGH
Sbjct: 495 ---------PQRVYGFSDKF-VAMIASHPDGKHY-LALTEDSS---VYSWGNGDGGRLGH 540
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G RT + P+LIE L++ +A G+ ++A + +G + TWG G YG LGHGN +
Sbjct: 541 GDRTWYEEPKLIE--SLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV 598
Query: 300 SVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP +V ALN ++VA +GD T V+ G V+S+G G+ LG
Sbjct: 599 MVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR 646
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 164
M++S +G VY S E +Y PQ V + FV A G + A L
Sbjct: 475 MILSTSGNVYMMYYGS--ETQY----------PQRVYGFSDKFVAMIASHPDGKHYLA-L 521
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ + VY++ G+ RLGH EP L+ +L + + IA G Y AL+ S
Sbjct: 522 TEDSSVYSWGNGDGGRLGHGDRTWYEEPK-LIESLVDKNITFIACGSTYSAALS---SNG 577
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+Y+ G G G+LGHG+ D P L+ + V +G V G V +WG
Sbjct: 578 ELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWG 637
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G YG LG G PK+V L D+ V G + ++ G+VY++G GE+ LG
Sbjct: 638 DGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697
Query: 345 H 345
H
Sbjct: 698 H 698
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG P+ I SL I A G+ + +S
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G +V P LV +L +V A G+ + L F
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMV--PTLVSALNGHMIVYVACGSGDSQTLCVTASGIVF 634
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 635 SWGDGDYGKLGRGGCNGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 690
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHG+ ++P+ IE + ++ + V G+ H + +D V WG YG +
Sbjct: 691 GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCV--GSLHVLALTEDQLVYGWGRNDYGQI 748
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
S P + L+ I + G +F
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSF 781
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A++S G +Y++G + G+LGHG +++ P + +L G I+ A G+G +T+
Sbjct: 566 GSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTL 625
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ +G V+++G +G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 626 CVTASGIVFSWGDGDYGKLGRGGCNGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 682
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G VYT+ G RLGH E + P + L+ V ++ G ++LAL
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKA-IEALKTKKVKELCVGSLHVLALT 732
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 3945
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3946 -ADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++ L + + VA G + + ++ G +Y++G G
Sbjct: 4005 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRY 4064
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4065 GRLGHGDSED 4074
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G P+ + L I + + G +
Sbjct: 619 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAA 678
Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +GK GEA G + V P+ +E+LK V + +G+ L+ +
Sbjct: 679 LTAYGEVYTWGK---GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQ 735
Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
VY WG ND + P LGT+ + P + ++ L C P+
Sbjct: 736 LVY--GWGR----------NDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPT 778
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
P AVY G +LG + K P E L L+PV +A G+ VV Q+G++
Sbjct: 2906 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSES--LSKLKPVHIAGGSKTLFVVSQEGKL 2963
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCG 338
G G G LG G++ PK + L+ +K + V +G +++DG V+S+G G
Sbjct: 2964 YACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEG 3023
Query: 339 ESASLGH 345
E LGH
Sbjct: 3024 EDGKLGH 3030
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + +D V +WG G G LGHG+ PK++++L D +A G + +S +
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLL 357
G++Y++G G LGH D V +L+
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLV 604
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L T + P ++IA C + C+ G+ + +G + + ++ L +
Sbjct: 2837 LQDTKKYYPCIEIAIKQCRNGGIDCKIHGLQI------IGKRKTYENQLATSVSFLASDW 2890
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+++ Q A + Q V WG LG +P ++L+ +K +
Sbjct: 2891 EIVQEQ-----ASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPV 2945
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS---LLFLSIF 362
H+A G T FVVS++G +Y+ G G + LG DG C + FLS +
Sbjct: 2946 HIAGGSKTLFVVSQEGKLYACGEGTNGRLGLG--DDGNACEPKPIPFLSQY 2994
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-- 108
G H +AVT G VY++G N GQ G+G+T +P + L R+ + + G+ ++
Sbjct: 3214 GALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAW 3273
Query: 109 LISDAGQ-------VYAFGKDSFGEA 127
+++D + KD G+A
Sbjct: 3274 VLTDQPAANNQEPVTFPTAKDPLGQA 3299
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 148/302 (49%), Gaps = 11/302 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+A+ S G+V S+G GQLGHG +E P+ I +L I GA T+ +
Sbjct: 21 GSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAV 80
Query: 111 SDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + GQVY++G FG +G V P+ +E V + A G+ T V++ EG
Sbjct: 81 APSRGQVYSWGWGDFGRLGHGDCNDVFV--PRPIEFFSGRPVHRVACGDTHTLVVAGEGE 138
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++TF + +LG HT ND L+ L+ V +A G + +LA SG V+S
Sbjct: 139 LFTFGRNQNGQLGLGHT--NDCLSPQLVVALQGERVRSVACGSEH--SLAATESGT-VFS 193
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G D P + L ++ V G H+AVV +DGRV T+GW +Y
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRV--VGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ +VP V AL + VA G T G++Y +G + LG
Sbjct: 252 GQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDS 311
Query: 349 AD 350
+D
Sbjct: 312 SD 313
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 12/305 (3%)
Query: 49 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G ++IAV S+G VYS+G G+LGHG + + PRPI G + + A G T
Sbjct: 71 VCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHT 130
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++++ G+++ FG++ G+ G+ T SPQLV +L+ V A G+ + +
Sbjct: 131 LVVAGEGELFTFGRNQNGQ--LGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES 188
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ WG LG + P ++G LE I +V G+ + ++ V+
Sbjct: 189 GTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHSAVVS---EDGRVF 244
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
+ G G+LGHG TD P + + + V AG W H G + WGW
Sbjct: 245 TFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV---AGGWRHTMAADSSGNLYGWGWN 301
Query: 287 RYGCLGHGNEECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++G LG G+ P +V AL + V G T V+E G VYS+G G + LGH
Sbjct: 302 KFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361
Query: 346 NAIAD 350
A D
Sbjct: 362 GAEQD 366
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 11/259 (4%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + G+ ++ I G V ++G+ G+ +G L +P+ + +L + +
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL--APKAISTLTDAGIESVVC 72
Query: 157 GNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYL 214
G +T AV G+VY++ WG+ RLGH + NDV P P+ PV ++A G +
Sbjct: 73 GAEYTIAVAPSRGQVYSWGWGDFGRLGH-GDCNDVFVPRPIE-FFSGRPVHRVACGDTHT 130
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L +A + +++ G G+LG G D P+L+ Q ++ V A G+ H+
Sbjct: 131 LVVAGEGE---LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV--ACGSEHSLAA 185
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V +WGWGRYG LG G + +P V L ++ + G + VVSEDG V++
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFT 245
Query: 335 FGCGESASLGHNAIADGQV 353
FG + LGH D V
Sbjct: 246 FGWSKYGQLGHGDHTDRTV 264
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP+ I LQ IIQ + G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 18/289 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E PR I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ + + + + + PQL+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH TE V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V G+V
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGKVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G+VY F G+ +LG + + + P ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K P+LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPQLIPELQ--DYVIIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYT 322
++ G+ H+ + G+V +WG G LGH E E +PKVV+ L + +A G+
Sbjct: 95 ISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 126 bits (316), Expect = 2e-26, Method: Composition-based stats.
Identities = 86/309 (27%), Positives = 156/309 (50%), Gaps = 30/309 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLIS 111
H ++S G ++++G+NS GQLGHG +++ PR + + + II + G ++ +
Sbjct: 1043 HIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVD 1102
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSRE 167
+ Q+Y++G +G+ +GV +T L + +++ V+ A G T VL +
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGV-----LTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKS 1157
Query: 168 GRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G ++TF W + +LG + P +E ++G + + IAAG+ + ++ C +
Sbjct: 1158 GDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVG-IHGERITAIAAGHSH--SIMCLDN 1214
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
G +YS G G+LGHG+ P+ I++ L +P++ ++ G +H + + V
Sbjct: 1215 G-DIYSWGANSKGQLGHGNIEKSLRPKQIDE---LKGKPIIKISCGHFHTVAISELNSVY 1270
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV------SEDGDVYSF 335
WG G + CLG+G+ + E PK+++ + K V G Y T V S+ G+VY
Sbjct: 1271 CWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYIC 1330
Query: 336 GCGESASLG 344
G GE LG
Sbjct: 1331 GGGEHGKLG 1339
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 25/317 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTML 109
G HS+AV +YS+GS+ GQLGHG + P+ I G +++ A G TM+
Sbjct: 1094 GGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMV 1153
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-----FVVQAAIGNFFTAVL 164
+ +G ++ FG + G + G+ K P +E+ + + + A G+ + +
Sbjct: 1154 LKKSGDLFTFGWNDSG--QLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMC 1211
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G +Y++ + +LGH + P + L+ P+++I+ G+ + +A++ S
Sbjct: 1212 LDNGDIYSWGANSKGQLGHGNIEKSLRPKQ-IDELKGKPIIKISCGHFHTVAISELNS-- 1268
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----GQD-G 278
VY G G LG+GS +E P++IE F +N + V G +H A V G D G
Sbjct: 1269 -VYCWGQGEHMCLGNGSNKNELSPKMIEFF--INKKIEKVVCGLYHTATVTAAENGSDRG 1325
Query: 279 RVCTWGWGRYGCLGHGNEECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V G G +G LG G + P V+ +LN + + ++G + +++ +G +Y
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385
Query: 334 SFGCGESASLGHNAIAD 350
++G G +G+ D
Sbjct: 1386 TWGYGNFGQIGNGKTED 1402
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ + A G +IS G+++ +G +S G+ +G+ K ++P+ VE+ K+ ++ +
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092
Query: 156 IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI----PVVQIAA 209
G + + + ++Y SWG+ +LGH + P L +E+ V+ IA
Sbjct: 1093 CGGEHSVAVDQSFQIY--SWGSSRYGQLGHGV----LTPQNLPKKIEDFTGGQKVLAIAT 1146
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVVAA 266
GY + + L + SG +++ G G+LG G+ + P IE +++ + +AA
Sbjct: 1147 GYAHTMVL--KKSG-DLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAA 1203
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G H+ + +G + +WG G LGHGN E PK + L I ++ G + T +
Sbjct: 1204 GHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI 1263
Query: 327 SEDGDVYSFGCGESASLGHNA 347
SE VY +G GE LG+ +
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGS 1284
Score = 88.6 bits (218), Expect = 5e-15, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 19/223 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HSI G +YS+G+NS GQLGHG E+ RP+ I L+G II+ + G T+
Sbjct: 1203 AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVA 1262
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
IS+ VY +G+ G +L SP+++E N + + G + TA +
Sbjct: 1263 ISELNSVYCWGQGEHMCLGNGSNKNEL--SPKMIEFFINKKIEKVVCGLYHTATVTAAEN 1320
Query: 165 -SREGRVYTFSWGNDARLGHHTE---PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALAC 219
S G VY G +LG + P +PHP ++ +L ++ +V ++G + A
Sbjct: 1321 GSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEF---SAI 1377
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----EQFQLLN 258
+ A+Y+ G G G++G+G D P I ++F L N
Sbjct: 1378 ITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQRFMLFN 1420
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVA 317
+ V VA G H AV+ DG + TWG G LGHG + +S P+ V+ I ++
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G + V + +YS+G LGH +
Sbjct: 1093 CGGEHSVAVDQSFQIYSWGSSRYGQLGHGVL 1123
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 11/296 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIPIKMVAAGAEHTAAVTEDGD 192
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + T + +A G+ + ++++ SG A+Y+
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSY--SG-ALYTY 248
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E + + +G W H + DG++ WGW ++
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI---SGGWRHTMALTSDGKLYGWGWNKF 305
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 306 GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E IP+ +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIPIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GI I AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 9/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 156 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIK--MVAAGAEHTAAV 187
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 335 FGCGESASLGHNAIAD 350
+G + LGH + D
Sbjct: 248 YGWSKYGQLGHGDLED 263
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 17 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 71
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 131
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 132 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 162
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 18/291 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P SL +R +Q G + ++ G+VYA G
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4352 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409
Query: 180 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4410 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4460
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG D+ P+L+E Q + V +G V D V +WG G YG LG G
Sbjct: 4461 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4521 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH 4571
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G +AVT+ G VY+ G ++G+LG G T+ P + S+Q + + + A +G
Sbjct: 4329 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4388
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G+ G+ +G + P+L+E L +V A G +A +
Sbjct: 4389 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4447 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4504
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4562
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG +L + LQ
Sbjct: 4623 -----DGTTSALQRPRLVHALQ 4639
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 9/312 (2%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG ++ V S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK 3356
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+++++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3357 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ +L V+Q+A G +A G +
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3472
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3473 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3530
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3531 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3590
Query: 346 NAIADGQVCSLL 357
+ + SL+
Sbjct: 3591 GSTIVNKKPSLV 3602
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G ++S+G G+LGHG + +PR I SL+ RI A G+G +
Sbjct: 3353 SGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAA 3412
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T++ P+LV+SL V+Q A G + T L+ +
Sbjct: 3413 ITSSGELYTWGLGEYGRLGHGDTATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3470
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + VVQI G + LAL V+
Sbjct: 3471 GSVYSWGDGDFGKLGRGGSDGCYTPL-LIDRLNGLGVVQIECGAQFSLALT---KYGEVW 3526
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3527 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDND 3584
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G+ P +V L+D + V+ G
Sbjct: 3585 HGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3616
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E L + + A G+ V+S+EG++Y
Sbjct: 3261 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3315
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + RLG + N EP L+ L + ++A ALA G ++S G G
Sbjct: 3316 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKMAVHSGGKHALALTQDG-KIFSWGEG 3373
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 3374 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3431
Query: 293 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG+ + PK+VQ+L + I VA G D T ++ DG VYS+G G+ LG +D
Sbjct: 3432 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3490
Query: 351 GQVCSLLF 358
G LL
Sbjct: 3491 GCYTPLLI 3498
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4386 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G + T ++ +
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4503
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4559
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4560 TWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI--ISIATGSLHCVACTDKGEVFTWGDND 4617
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4618 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + + +I + + + ++ VY++G G +G + P+LVE+L +
Sbjct: 501 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDR--VWYDEPKLVEALVDKN 558
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ A G+ ++AVLS G +YT+ GN RLGH N + P L+ L VV +A G
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIP-TLVTALNGHMVVHVACG 617
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L SG+ V+S G G GKLG G K P+++++ LL++ V G
Sbjct: 618 SGDSQTLCVTASGI-VFSWGDGNYGKLGRGGCDGSKTPKIVDK--LLDINVAKVYCGGQF 674
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A + G V TWG G LGHGNEE PKV++ L K + G++ ++ED
Sbjct: 675 SAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQ 734
Query: 331 DVYSFG 336
VY +G
Sbjct: 735 LVYGWG 740
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG P+ + +L I A G+ + ++S
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G L+ P LV +L VV A G+ + L F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVHVACGSGDSQTLCVTASGIVF 633
Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G +LGHG+ ++P++IE ++ + V G +H + +D V WG YG +
Sbjct: 690 GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCV--GNFHVLALTEDQLVYGWGRNDYGQI 747
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
P + L+ I +A G +F
Sbjct: 748 DPALGTVVPEPTLCPTLSGKNIIGLACGLTQSF 780
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S ++S G +Y++G + G+LGHG ++ P + +L G ++ A G+G +T+
Sbjct: 565 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTL 624
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ +G V+++G ++G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 625 CVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 681
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G VYT+ G RLGH E + P ++ L V ++ G ++LAL
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLXTKKVKELCVGNFHVLALT 731
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG E V+ L +L + VQ+ G LLA+
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT-- 4341
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4342 -ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4400
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4401 YSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4460
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4461 GRLGHGDSED 4470
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 165
M++S +G VY S E +Y PQ V S K + ++ + L+
Sbjct: 474 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 521
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++ VY++ G+ RLGH EP L+ L + + IA G Y L+ S
Sbjct: 522 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 577
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G G+LGHG+ + P L+ + V +G V G V +WG
Sbjct: 578 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGD 637
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G YG LG G + PK+V L D+ V G + ++ G+VY++G GE LGH
Sbjct: 638 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 697
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +++ A GA
Sbjct: 3508 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3567
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3568 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3617
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G + G+LG G + P+ + L I + + G +
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 677
Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +GK GE G + + P+++E L V + +GNF L+ +
Sbjct: 678 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQ 734
Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
VY WG ND + P LGT+ P + ++ LAC
Sbjct: 735 LVY--GWGR----------NDYGQIDPALGTVVPEPTLCPTLSGKNIIGLAC 774
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
Q V WG LG +P + L+ +K IH+A G T FVVS++G +Y+
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3316
Query: 336 GCGESASLGHNAIADGQVCS---LLFLSIFQYL 365
G G + LG D VC + FLS QY+
Sbjct: 3317 GEGTNGRLGLG--DDSNVCEPKLIPFLS--QYM 3345
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+G+T +P + L R+ + + G+ ++
Sbjct: 3564 GALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSI 3621
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 18/291 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P SL +R +Q G + ++ G+VYA G
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4319 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376
Query: 180 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4377 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4427
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG D+ P+L+E Q + V +G V D V +WG G YG LG G
Sbjct: 4428 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4488 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGH 4538
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G +AVT+ G VY+ G ++G+LG G T+ P + S+Q + + + A +G
Sbjct: 4296 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4355
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G+ G+ +G + P+L+E L +V A G +A +
Sbjct: 4356 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4414 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4471
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4529
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG +L + LQ
Sbjct: 4590 -----DGTTSALQRPRLVHALQ 4606
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 9/312 (2%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG ++ V S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK 3351
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+++++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3352 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ +L V+Q+A G +A G +
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3467
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3525
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3526 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3585
Query: 346 NAIADGQVCSLL 357
+ + SL+
Sbjct: 3586 GSTIVNKKPSLV 3597
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G ++S+G G+LGHG + +PR I SL+ RI A G+G +
Sbjct: 3348 SGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAA 3407
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T++ P+LV+SL V+Q A G + T L+ +
Sbjct: 3408 ITSSGELYTWGLGEYGRLGHGDTATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3465
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + VVQI G + LAL V+
Sbjct: 3466 GSVYSWGDGDFGKLGRGGSDGCYTPL-LIDRLNGLGVVQIECGAQFSLALT---KYGEVW 3521
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3522 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDND 3579
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G+ P +V L+D + V+ G
Sbjct: 3580 HGQQGNGSTIVNKKPSLVHELDDARVNRVSCG 3611
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E L + + A G+ V+S+EG++Y
Sbjct: 3256 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3310
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + RLG + N EP L+ L + ++A ALA G ++S G G
Sbjct: 3311 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKVAVHSGGKHALALTQDG-KIFSWGEG 3368
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 3369 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3426
Query: 293 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG+ + PK+VQ+L + I VA G D T ++ DG VYS+G G+ LG +D
Sbjct: 3427 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3485
Query: 351 GQVCSLLF 358
G LL
Sbjct: 3486 GCYTPLLI 3493
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4353 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4412
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G + T ++ +
Sbjct: 4413 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4470
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4526
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4527 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4584
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4585 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + + +I + + + ++ VY++G G +G + P+LVE+L +
Sbjct: 493 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDR--VWYDEPKLVEALVDKN 550
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ A G+ ++AVLS G +YT+ GN RLGH N + P L+ L VV +A G
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIP-TLVTALNGHMVVYVACG 609
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L SG+ V+S G G GKLG G K P+++++ LL++ V G
Sbjct: 610 SGDSQTLCVTASGI-VFSWGDGNYGKLGRGGCDGSKTPKIVDK--LLDINVAKVYCGGQF 666
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A + G V TWG G LGHGNEE PKV++ L K + G++ ++ED
Sbjct: 667 SAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQ 726
Query: 331 DVYSFG 336
VY +G
Sbjct: 727 LVYGWG 732
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG P+ + +L I A G+ + ++S
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G L+ P LV +L VV A G+ + L F
Sbjct: 568 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 625
Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 626 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 681
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G +LGHG+ ++P++IE + ++ + V G +H + +D V WG YG +
Sbjct: 682 GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCV--GNFHVLALTEDQLVYGWGRNDYGQI 739
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
P + L+ I +A G +F
Sbjct: 740 DPALGTIVPEPTLCPTLSGKNIIGLACGLTQSF 772
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S ++S G +Y++G + G+LGHG ++ P + +L G ++ A G+G +T+
Sbjct: 557 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTL 616
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ +G V+++G ++G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 617 CVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 673
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G VYT+ G RLGH E + P ++ L+ V ++ G ++LAL
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLKPKKVKELCVGNFHVLALT 723
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG E V+ L +L + VQ+ G LLA+
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTAD 4310
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4311 GK---VYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4367
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4368 YSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4427
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4428 GRLGHGDSED 4437
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 165
M++S +G VY S E +Y PQ V S K + ++ + L+
Sbjct: 466 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 513
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++ VY++ G+ RLGH EP L+ L + + IA G Y L+ S
Sbjct: 514 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 569
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G G+LGHG+ + P L+ + V +G V G V +WG
Sbjct: 570 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGD 629
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G YG LG G + PK+V L D+ V G + ++ G+VY++G GE LGH
Sbjct: 630 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 689
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G +++ A GA
Sbjct: 3503 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3562
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3563 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3612
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G + G+LG G + P+ + L I + + G +
Sbjct: 610 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 669
Query: 110 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +GK GE G + + P+++E LK V + +GNF L+ +
Sbjct: 670 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQ 726
Query: 169 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
VY WG ND + P LGT+ P + ++ LAC
Sbjct: 727 LVY--GWGR----------NDYGQIDPALGTIVPEPTLCPTLSGKNIIGLAC 766
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
Q V WG LG +P + L+ +K IH+A G T FVVS++G +Y+
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3311
Query: 336 GCGESASLGHNAIADGQVCS---LLFLSIFQYL 365
G G + LG D VC + FLS QY+
Sbjct: 3312 GEGTNGRLGLG--DDSNVCEPKLIPFLS--QYM 3340
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+G+T +P + L R+ + + G+ ++
Sbjct: 3559 GALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSI 3616
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 154/301 (51%), Gaps = 19/301 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G G+LG T +++P ++ R+ A+AG + +++ G VY +G +
Sbjct: 106 VFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHNIALTEVGNVYTWGYGA 163
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---AR 180
FG +G +L+ P+L+E +V + G TA ++ G +YT WG D R
Sbjct: 164 FGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHTAAVTESGELYT--WGRDEGEGR 219
Query: 181 LGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
LGH P+ ++ P ++P+ + G + +AL SG ++S G +
Sbjct: 220 LGH-GNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALT--KSGQ-LWSWGGNANHE 275
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LGHG+R + P+++ + + L V VA G +HAA + QDG+V TWG+G G LGHG
Sbjct: 276 LGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTL 333
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
E P +V+A+ D ++A G T ++E+GD+Y++G LG + D Q+ +
Sbjct: 334 ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPV 393
Query: 357 L 357
L
Sbjct: 394 L 394
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 257
GY + +P+ + V++ G G G++GHGS EK P LI +L
Sbjct: 21 GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80
Query: 258 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
L V V G +H+ + + V WG G G LG E + P V + V+
Sbjct: 81 PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ G ++E G+VY++G G +LGH +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS 171
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 18/291 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4013 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070
Query: 180 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4071 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4121
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG D+ P+LIE Q + V +G V D V +WG G YG LG G
Sbjct: 4122 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +P +++L + + V G + ++ G +Y++G G+ LGH
Sbjct: 4182 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGH 4232
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 150/300 (50%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGK 3031
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3032 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 3089
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH +P L+ +L ++QIA G +A G+
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRIIQIACGSRDAQTMALTADGL- 3147
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3148 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3205
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G + G+
Sbjct: 3206 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGN 3265
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 151/322 (46%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3990 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4049
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 4050 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 4107
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4108 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 4165
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L V V G+ + + + G + TWG
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVVKVECGSQFSVALTRSGAIYTWG 4223
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG +L + LQ
Sbjct: 4284 -----DGTTSALQRPRLVHALQ 4300
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG + +PR I SL+ RI A G+G +
Sbjct: 3028 SGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA 3087
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+ + P+LV+SL ++Q A G + T L+ +
Sbjct: 3088 ITSSGELYTWGLGEYGRLGHGDTATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTAD 3145
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + VVQI G + LAL V+
Sbjct: 3146 GLVYSWGDGDFGKLGRGGSDGCYTPL-LIDRLNGLGVVQIECGAQFSLALT---KYGEVW 3201
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + + VA GA H V G+V WG
Sbjct: 3202 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQVYAWGDND 3259
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L+D + V+ G
Sbjct: 3260 HGQQGNGTTIVNKKPSLVHELDDARVNRVSCG 3291
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 127/249 (51%), Gaps = 17/249 (6%)
Query: 116 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G KD G G++G+K + P E L + V A G+ V+S+EG++Y
Sbjct: 2936 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2990
Query: 173 FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
G + RLG + N EP P+ + I V + +G + LAL V+S G
Sbjct: 2991 CGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALT---QDGKVFSWGE 3047
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG L
Sbjct: 3048 GEDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRL 3105
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
GHG+ +S PK+VQ+L + I +A G D T ++ DG VYS+G G+ LG +
Sbjct: 3106 GHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-S 3164
Query: 350 DGQVCSLLF 358
DG LL
Sbjct: 3165 DGCYTPLLI 3173
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4047 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L +P+L+E+L++ V+ A G+ T ++ +
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 4164
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG A+Y
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVVKVECGSQFSVALT--RSG-AIY 4220
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4221 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4278
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4279 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4315
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I +I + + + ++ VY++G G +G + P+L+E+L
Sbjct: 501 SEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRA--WYDEPKLIEALVEKN 558
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ A G+ ++A LS G +YT+ GN RLGH N + P L+ L VV +A G
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIP-TLVTALNGHMVVYVACG 617
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L SG+ V+S G G GKLG G K P+++++ LL++ V G
Sbjct: 618 SGDSQTLCVTASGI-VFSWGDGNYGKLGRGGCDGSKTPKIVDK--LLDINVAKVYCGGQF 674
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A + G V TWG G LGHGNE+ PK++ L K + G+ ++ED
Sbjct: 675 SAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQ 734
Query: 331 DVYSFG 336
+Y +G
Sbjct: 735 LIYGWG 740
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG P+ I +L I A G+ + +S
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G ++ P LV +L VV A G+ + L F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVMI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633
Query: 174 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHG+ ++P++I+ + ++ + V G H + +D + WG YG +
Sbjct: 690 GEAYRLGHGNEDHVRYPKIIDILKTKKVKELCV--GNLHVLALTEDQLIYGWGRNDYGQI 747
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
P + L+ I +A G +F
Sbjct: 748 DPALGTVVPEPTLCPTLSGKNVIGLACGPTQSF 780
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA + + G +S A++S G +Y++G + G+LGHG ++ P + +L G +
Sbjct: 552 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMV 611
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ A G+G +T+ ++ +G V+++G ++G+ G G+K +P++V+ L +I V +
Sbjct: 612 VYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKV 668
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G F+A L+ G VYT+ G RLGH E + P ++ L+ V ++ G ++
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPK-IIDILKTKKVKELCVGNLHV 727
Query: 215 LALA 218
LAL
Sbjct: 728 LALT 731
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
I + + G + A L+++ VY++ G+ RLGH EP L+ L + IA
Sbjct: 506 IMIASHSDGTHYLA-LTQDNSVYSWGNGDGGRLGHGDRAWYDEPK-LIEALVEKNITFIA 563
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G Y AL+ S +Y+ G G G+LGHG+ + P L+ + V +G
Sbjct: 564 CGSTYSAALS---SNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGD 620
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
V G V +WG G YG LG G + PK+V L D+ V G + ++
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA 680
Query: 329 DGDVYSFGCGESASLGH 345
G+VY++G GE+ LGH
Sbjct: 681 YGEVYTWGKGEAYRLGH 697
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3946 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 4002
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4003 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4122 GRLGHGDSED 4131
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG +P + L+G ++I A GA
Sbjct: 3183 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALH 3242
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3243 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3292
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
Q V WG LG +P + L+ +K +H+A G T FVVS++G +Y+
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991
Query: 336 GCGESASLGHNAIADGQVCS---LLFLSIF 362
G G + LG D VC + FLS +
Sbjct: 2992 GEGTNGRLGLG--DDSNVCEPKPIPFLSQY 3019
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P + L R+ + + G+ ++
Sbjct: 3239 GALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSI 3296
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+EG
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 F--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ +G + +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ + + G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE---FFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 19/322 (5%)
Query: 31 LRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
LR ++A C R + G HS+ + G VY+ G N+ GQLGH E +P
Sbjct: 65 LRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKP 122
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVES 145
I +L I+ A G ++ +SD GQ++++G S G+ G+ T+ V P+L++
Sbjct: 123 EQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQK 180
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPV 204
L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P + +LE IP+
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPL 239
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
Q+AAG + AL+ SG AV++ G G+LG D + P + +LL Q VV
Sbjct: 240 AQVAAGGAHSFALSL--SG-AVFAWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVY 293
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYT 322
++ G H AV+ + G V T+G G G LGH + E P+ V L + +A G +T
Sbjct: 294 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 353
Query: 323 TFVVSEDGDVYSFGCGESASLG 344
V G +Y+FGCG LG
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLG 375
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 188 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 247
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+A+G ++ G + G+ + SP V+ L+ VV + G TAVL+
Sbjct: 248 HSFALSLSGAVFAWGMNNAG--QLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 362
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 363 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 391
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 199 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 257
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 258 VFAWGMNNAGQLGLSDE-EDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 313
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 314 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 371
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 372 GQLGTGHTCNVKCPSPVK 389
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQNIVHVAC 138
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 199 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 253
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 314 GAGSCGQLGHDSMND 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+++G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 299
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 300 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 357
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 358 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VYA G
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGY 3953
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G G V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 3954 GALGR--LGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P L+ L +V IA G + A++ S +Y+ G G G+LGH
Sbjct: 4012 KLGHGNRITYDRPK-LIEALLGTEIVDIACGGHHSAAIS---SAGWLYTWGKGRYGRLGH 4067
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P ++ Q + V +G V D V +WG G YG LG G +
Sbjct: 4068 GDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4127
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP +++L + + V G + ++ G VY++G G+ LGH
Sbjct: 4128 KVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4173
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 8/290 (2%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT+ G VY+ G + G+LG G + P + S+Q + I + A +G + +S G
Sbjct: 3941 AVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4000
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY++G+ G+ +G + T P+L+E+L +V A G +A +S G +YT+
Sbjct: 4001 HVYSWGEGDDGKLGHGNRIT--YDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWG 4058
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + ++P ++ L+ V+ +A G L C V+S G G
Sbjct: 4059 KGRYGRLGHGDSDDQLKP-TVVTALQGYKVIDVACGSGDAQTL-CVTDDDNVWSWGDGDY 4116
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P IE L L V V G+ + + + G V TWG G Y LGHG
Sbjct: 4117 GKLGRGGSDGCKVPMKIE--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ P+ V AL K + +ATG S+ G+VY++G + LG
Sbjct: 4175 TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG 4224
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 14/254 (5%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
++Q A R + VY +G KD G G++G+K + P E L + +
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG----GLKGSK-IKLPVHSEVLSKLKPIH 2959
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ V+S+EG++Y G + RLG N EP P + L + ++A
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKP-IPFLSQYIIKKVAVHSGG 3018
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
ALA G V+S G G GKLGHG+R PRLIE + ++ +A G+ H+A
Sbjct: 3019 KHALALTQDG-KVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRD--IACGSGHSAA 3075
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGD 331
+ +G + TWG G YG LGHG+ PK+V AL + I VA G D T ++EDG
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135
Query: 332 VYSFGCGESASLGH 345
VYS+G G+ LG
Sbjct: 3136 VYSWGDGDFGKLGR 3149
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 9/312 (2%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGK 3019
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + + + P+L+E+LK+ + A G+ +A ++
Sbjct: 3020 HALALTQDGKVFSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIA 3077
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ L V+Q+A G +A G +
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPK-LVDALVGQRVIQVACGSRDAQTMALTEDG-S 3135
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G G GKLG G P +++ L + V V GA + + + G V TWG
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3193
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3194 GDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGN 3253
Query: 346 NAIADGQVCSLL 357
+ + SL+
Sbjct: 3254 GSTMVNRKPSLV 3265
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR I +L+ RI A G+G +
Sbjct: 3016 SGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAA 3075
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ G++Y +G +G +G T L P+LV++L V+Q A G + T L+ +
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTED 3133
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P P + L + VVQ+ G + LAL V+
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLP-VDRLNGLGVVQVECGAQFSLALT---KYGEVW 3189
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDND 3247
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G+ P +V L D K VA G
Sbjct: 3248 HGQQGNGSTMVNRKPSLVHNLEDAKVNRVACG 3279
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 121/220 (55%), Gaps = 10/220 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLIS 111
HS A++S G +Y++G G+LGHG ++++ +P + +LQG ++I A G+G +T+ ++
Sbjct: 4044 HSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVT 4103
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
D V+++G +G+ G G+ P +ESL + VV+ G+ F+ L+R G VY
Sbjct: 4104 DDDNVWSWGDGDYGKLGRG--GSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVY 4161
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
T+ G+ RLGH T+ + P + L+ +V IA G + +AC G VY+ G
Sbjct: 4162 TWGKGDYHRLGHGTDDHVRRPRK-VSALQGKKIVSIATGSLH--CVACSDKG-EVYTWGD 4217
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
G+LG G+ ++ PRL+ Q N+ VA G+ H
Sbjct: 4218 NDEGQLGDGTTHAQQSPRLVHALQGKNI--TRVACGSAHT 4255
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 10/288 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RP+ I +L G I+ A G +
Sbjct: 3988 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAA 4047
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
IS AG +Y +GK +G +G +L P +V +L+ V+ A G+ T ++ +
Sbjct: 4048 ISSAGWLYTWGKGRYGRLGHGDSDDQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDD 4105
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4106 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVVKVECGSQFSVALT--RSG-AVY 4161
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR + Q + V +A G+ H G V TWG
Sbjct: 4162 TWGKGDYHRLGHGTDDHVRRPRKVSALQGKKI--VSIATGSLHCVACSDKGEVYTWGDND 4219
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G LG G + P++V AL VA G T S +S
Sbjct: 4220 EGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSL 4267
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 11/254 (4%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++ G VY++G G +G + PQ++E L + V A G+ ++A +S
Sbjct: 514 LALTTKGIVYSWGNGDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISST 571
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G + T+ G+ RLGH +D+ ++ L V +A G L SG+ V+
Sbjct: 572 GELLTWGRGSYGRLGHGI-CDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI-VF 629
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G GKLG G K P+++++ LL+ V V G +A + G V TWG G
Sbjct: 630 SWGDGDYGKLGRGGSDGSKLPKIVDK--LLDQNVVKVFCGGQFSAALTAHGEVYTWGKGD 687
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG----CGESASL 343
+ LGHGNEE PK+V+ L + K ++ G+ ++ED VY +G C SL
Sbjct: 688 HYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747
Query: 344 GHNAIADGQVCSLL 357
G +++ +C L
Sbjct: 748 G-AVVSEPTLCPTL 760
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 19/253 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T+KG+VYS+G+ G+LGHG + P+ I L + A G+ + IS
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++ +G+ S+G +G+ ++ P +V +L V A G+ + L F
Sbjct: 572 GELLTWGRGSYGRLGHGICDD--ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVF 629
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L + VV++ G + AL VY+ G
Sbjct: 630 SWGDGDYGKLGRGGSDGSKLPK-IVDKLLDQNVVKVFCGGQFSAALTAHGE---VYTWGK 685
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHG+ + P+L+E + N + ++ G H + +D V +GWGR
Sbjct: 686 GDHYRLGHGNEEHVRFPKLVEGLR--NKKVRDLSVGNLHILAITEDQLV--YGWGR---- 737
Query: 292 GHGNEECESVPKV 304
N+ C+ P +
Sbjct: 738 ---NDACQIDPSL 747
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E R + G +S A++S G + ++G S G+LGHG ++ P + +L G +
Sbjct: 548 EVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTV 607
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
A G+G +T+ ++++G V+++G +G+ G G+KL P++V+ L + VV+
Sbjct: 608 THVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKL---PKIVDKLLDQNVVKV 664
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G F+A L+ G VYT+ G+ RLGH E + P L+ L N V ++ G ++
Sbjct: 665 FCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPK-LVEGLRNKKVRDLSVGNLHI 723
Query: 215 LALA 218
LA+
Sbjct: 724 LAIT 727
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G + WG++ R LG P P +L + +Q+A G L A+
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPC-ESLSALRPIQLAGGEQTLFAVTAD 3945
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3946 GK---VYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4002
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G G LGHGN PK+++AL + + +A G + + +S G +Y++G G
Sbjct: 4003 YSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRY 4062
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4063 GRLGHGDSDD 4072
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG RP + L+G +++ A GA
Sbjct: 3171 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALH 3230
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++DAGQVYA+G + G+ G T + P LV +L++ V + A G+
Sbjct: 3231 CLAVTDAGQVYAWGDNDHGQQGNG--STMVNRKPSLVHNLEDAKVNRVACGS 3280
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G ++ P+ + L +++ G +
Sbjct: 614 SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAA 673
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+VY +GK +G + + V P+LVE L+N V ++GN ++ +
Sbjct: 674 LTAHGEVYTWGKGDHYRLGHGNE--EHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQL 731
Query: 170 VYTFSWG-NDA 179
VY WG NDA
Sbjct: 732 VY--GWGRNDA 740
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-- 108
G H +AVT G VY++G N GQ G+G+T +P + +L+ ++ + A G+ ++
Sbjct: 3227 GALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAW 3286
Query: 109 LISDAGQV-------YAFGKDSFGEAEYGVQG----TKLVTSP---------QLVESLKN 148
+++D + + KD G+A G T +VT P ++ SL++
Sbjct: 3287 VLTDQPTLGNQEPVTFPTAKDPLGQATLGFTQDKTETNVVTPPTKSSRPSLAHIILSLES 3346
Query: 149 IFVVQAAIGNFFTAVLSREGRV 170
Q A+ + A+ + R
Sbjct: 3347 NVAKQQALQHVLNALFIMQART 3368
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + G V +WG G G LGHG+ P+V++ L+D ++A G + +S
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571
Query: 330 GDVYSFGCGESASLGHNAIAD 350
G++ ++G G LGH D
Sbjct: 572 GELLTWGRGSYGRLGHGICDD 592
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 277 DGRVCTWGWGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG +GWG G LG +P ++L+ ++ I +A G+ T F V+ DG VY+
Sbjct: 3891 DGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 335 FGCGESASLGHNAIADGQVCSLL 357
G G LG + V +LL
Sbjct: 3951 TGYGALGRLGTGGVDSVMVPTLL 3973
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S A+T+ G VY++G +LGHG E P+ + L+ ++ + G + I++
Sbjct: 671 SAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQ 730
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
VY +G++ + + + +V+ P L +L V+
Sbjct: 731 LVYGWGRNDACQIDPSLGA--VVSEPTLCPTLSGKSVI 766
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSTFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H + V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV-LS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T+ +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 65 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG----RTMLISDAGQVYAFG 120
+S+G N+ G LG GTT+ P PI +LQG+ ++ A G G + +++ GQVY +G
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
G+ +G ++ + P+L+ L++ +V+ A G+ T V+S+ G V+ + WG+ +
Sbjct: 61 SGKSGQLGHG--DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LG + N +P + +L+ + V ++A G + + SG VY+ G G+ G+LGHG
Sbjct: 119 LGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVT--ESGH-VYTWGWGVNGQLGHG 174
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-DGRVCTWGWGRYGCLGHGNEEC- 298
+ P +++ + + +A G H VV + D V +WGW YG LGHG +
Sbjct: 175 DDASQSRPMYVKKLHGIYVS--TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIF 232
Query: 299 ----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
P+ ++ L +A G T +S GDVY+FG G+ LG
Sbjct: 233 GGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 125/244 (51%), Gaps = 17/244 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS AVT +G VY++GS SGQLGHG ++ PR I LQ I++ A G+ T+++S A
Sbjct: 46 HSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKA 105
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G FG + GV T P V SL + V + A G+ TAV++ G VYT+
Sbjct: 106 GLVFAWGWGHFG--QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTW 163
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
WG + +LGH + + P + L I V +A G + + ++ AV+S G
Sbjct: 164 GWGVNGQLGHGDDASQSRPM-YVKKLHGIYVSTLACGLAHTVVVS--EVDRAVFSWGWDE 220
Query: 234 GGKLGHGSR-----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G+LGHG + PR I+ Q +A G+ + + G V +GWG+
Sbjct: 221 YGQLGHGGWDIFGGNKNRSPRPIKDLQQ-------IACGSSYTLALSSRGDVYAFGWGKD 273
Query: 289 GCLG 292
G LG
Sbjct: 274 GQLG 277
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 11/225 (4%)
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF----FTAVLSREGRVYTFSWGNDARL 181
+ G+ T V SP + +L+ + VV A G +A ++ +G+VYT+ G +L
Sbjct: 8 DGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQL 67
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH N V P ++G L++ P+V++A G + + ++ +G+ V++ G G G+LG GS
Sbjct: 68 GHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVS--KAGL-VFAWGWGHFGQLGVGS 123
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ P ++ L ++ VA G+ H AVV + G V TWGWG G LGHG++ +S
Sbjct: 124 THNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSR 181
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSE-DGDVYSFGCGESASLGH 345
P V+ L+ + +A G T VVSE D V+S+G E LGH
Sbjct: 182 PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 173 FSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIA--AGYCYLLALACQPSGMAVYS 228
FSWG ND LG T P P++ L+ + VV +A G + A G VY+
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPII-ALQGLLVVSVACGGGSEEQHSAAVTEQGQ-VYT 58
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G G+LGHG + PRLI Q P+V VA G+ H VV + G V WGWG
Sbjct: 59 WGSGKSGQLGHGDSQNLVLPRLIVGLQS---NPIVEVACGSAHTVVVSKAGLVFAWGWGH 115
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG G+ + P V +L+ VK VA G T VV+E G VY++G G + LGH
Sbjct: 116 FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V+ G+V+++G GQLG G+T P + SL G+++ + A G+ T ++
Sbjct: 95 GSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVV 154
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+++G VY +G G+ +G ++ + P V+ L I+V A G T V+S R
Sbjct: 155 TESGHVYTWGWGVNGQLGHGDDASQ--SRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRA 212
Query: 171 YTFSWGND--ARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
FSWG D +LGH + P P+ + QIA G Y LAL+ +
Sbjct: 213 -VFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIK------DLQQIACGSSYTLALSSRGD- 264
Query: 224 MAVYSVGCGLGGKLG 238
VY+ G G G+LG
Sbjct: 265 --VYAFGWGKDGQLG 277
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G D+ G+ G+ GT+ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
++ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI +Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G+LG
Sbjct: 64 GQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDTDGQLG 117
Query: 239 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
G+ K PR I+ L ++Q V +A G +H+ + + V +WG ++G LG G E
Sbjct: 118 LPGTEEYIKVPRNIKS--LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ +S P+++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G + G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDG--QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 101
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 278
+ V++ G G G+LGH S + E +PR + F+L+ A G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V QAA G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G D+ G+ G+ GT+ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
++ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI +Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G+LG
Sbjct: 64 GQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDTDGQLG 117
Query: 239 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
G+ K PR I+ L ++Q V +A G +H+ + + V +WG ++G LG G E
Sbjct: 118 LPGTEEYIKVPRNIKS--LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ +S P+++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGHG E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHG--REGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G + G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG + P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKDFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG-KDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ +G +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 25/311 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++AVT G V S+G + GQLG G ++ P +++L R+ A G T ++
Sbjct: 78 GGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV 137
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G V +GK + G+ G + L+ P+ V +L N + Q A G T LS G +
Sbjct: 138 TDVGLVMCWGKGNSGQLGQGDWTSSLL--PRTVSTLYNEKIRQIACGMAHTLALSVNGEI 195
Query: 171 YTFSWGNDARLG---HHTEPNDV-EPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 225
Y++ G D +LG H E DV P + + E + + +C + C+
Sbjct: 196 YSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCR----- 250
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++S G G G+LG G P ++ + + NL+ VAAG H AV+ +G + T G
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRR-SIENLRICYVAAGGHHTAVLSDNGEIFTCGR 309
Query: 286 GRYGCLGHGNEECESVPKVVQA------------LNDVKAIHVATGDYTTFVVSEDGDVY 333
G YG LGHG+ + + K +A L D K I A GD T V+S G+V+
Sbjct: 310 GSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVF 369
Query: 334 SFGCGESASLG 344
++G E LG
Sbjct: 370 AWGAAEDGQLG 380
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 28/293 (9%)
Query: 73 GQLGHGTTEEEWRPRPIR-----------------SLQGIRIIQAAAGAGRTMLISDAGQ 115
G+LGHG T + P+ +R SL G I A G T+ +++ G+
Sbjct: 33 GRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGA--IYVACGGHHTVAVTEDGE 90
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V ++G + E + G T P +V++L N V A G + TAV++ G V +
Sbjct: 91 VVSWGWGN--EGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGK 148
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
GN +LG + + P + TL N + QIA G + LAL+ +YS G G G
Sbjct: 149 GNSGQLGQGDWTSSLLPRTV-STLYNEKIRQIACGMAHTLALSVNGE---IYSWGAGADG 204
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
+LG G +E Q ++ + +A G+ H + D R+ +WG G G LG
Sbjct: 205 QLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGL 264
Query: 294 GNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G+ E P VV+ ++ +++ +VA G + T V+S++G++++ G G LGH
Sbjct: 265 GDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGH 317
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 230 GCGLGGKLGHG---SRTDEKHPRLIEQF-----------QLLNLQPVVVAAGAWHAAVVG 275
G G G+LGHG S+ + K R ++F + LN + VA G H V
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLN-GAIYVACGGHHTVAVT 86
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG V +WGWG G LG GN ++VP VV+AL++ + VA G Y T VV++ G V +
Sbjct: 87 EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCW 146
Query: 336 GCGESASLG 344
G G S LG
Sbjct: 147 GKGNSGQLG 155
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAA 102
Q G H++A++ G +YS+G+ + GQLG G +EE P+ +R + + A
Sbjct: 178 QIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIAC 237
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-ESLKNIFVVQAAIGNFFT 161
G+ M I+D +++++G + G G ++ SP +V S++N+ + A G T
Sbjct: 238 GSRHCMAITDDCRLFSWGLGADGRLGLGDSESRF--SPTVVRRSIENLRICYVAAGGHHT 295
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT---------------LENIPVVQ 206
AVLS G ++T G+ +LGH D +P L L + +++
Sbjct: 296 AVLSDNGEIFTCGRGSYGQLGH----GDADPQLTLKKARALRHGCLLLHIVQLRDKKIIK 351
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 264
A G + L ++ + V++ G G+LG G P +L +L+ +V V
Sbjct: 352 AACGDTHTLVIS---TAGEVFAWGAAEDGQLGTGGTEGANSP-----VELTSLRGLVGDV 403
Query: 265 AAGAWHAAVV 274
+ G H+A V
Sbjct: 404 SCGLVHSAAV 413
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV---------------VQIAAGYCY 213
R WG RLGH + +EP L + PV + +A G +
Sbjct: 23 RTSLQGWGEFGRLGHGDTLSQLEPKRLRFD-KRFPVSLSFTALAHESLNGAIYVACGGHH 81
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+A+ V S G G G+LG G+ D+ P +++ L N + VA G +H AV
Sbjct: 82 TVAVT---EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAV 136
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V G V WG G G LG G+ +P+ V L + K +A G T +S +G++Y
Sbjct: 137 VTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIY 196
Query: 334 SFGCGESASLG 344
S+G G LG
Sbjct: 197 SWGAGADGQLG 207
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 276 QDG--RVCTWGWGRYGCLGHGNEECESVPKVV-----------------QALNDVKAIHV 316
+DG R GWG +G LGHG+ + PK + ++LN AI+V
Sbjct: 18 EDGGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNG--AIYV 75
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
A G + T V+EDG+V S+G G LG D V +++
Sbjct: 76 ACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVV 116
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 152/296 (51%), Gaps = 11/296 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + + + +A G+ + ++++ SG A+Y+
Sbjct: 193 LYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKMSMVACGWRHTISVSY--SG-ALYTY 248
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E + + +G W H + DG++ WGW ++
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI---SGGWRHTMALTSDGKLYGWGWNKF 305
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 306 GQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +G
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTC 74
Query: 157 GNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G + L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCL 133
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 134 AVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAVT 188
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y++
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTY 248
Query: 336 GCGESASLGHNAIAD 350
G + LGH + D
Sbjct: 249 GWSKYGQLGHGDLED 263
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L Q V
Sbjct: 17 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVS 71
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 131
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 132 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 162
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 19/301 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G G+LG T +++P ++ R+ A+AG + +++ G VY +G +
Sbjct: 106 VFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHNIALTEVGNVYTWGYGA 163
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---AR 180
FG +G +L+ P+L+E +V + G +A ++ G +YT WG D R
Sbjct: 164 FGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHSAAVTESGELYT--WGRDEGEGR 219
Query: 181 LGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
LGH P+ ++ P ++P+ + G + +AL SG ++S G +
Sbjct: 220 LGH-GNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALT--KSGQ-LWSWGGNANHE 275
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LGHG+R + P+++ + + L V VA G +HAA + QDG+V TWG+G G LGHG
Sbjct: 276 LGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTL 333
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
E P +V+A+ D ++A G T ++E+GD+Y++G LG + D Q+ +
Sbjct: 334 ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPV 393
Query: 357 L 357
L
Sbjct: 394 L 394
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 257
GY + +P+ + V++ G G G++GHGS EK P LI +L
Sbjct: 21 GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80
Query: 258 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
L V V G +H+ + + V WG G G LG E + P V + V+
Sbjct: 81 PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ G ++E G+VY++G G +LGH +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS 171
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 38 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 95
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 96 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 153
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 154 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 211
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 212 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 266
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 267 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326
Query: 339 ESASLG 344
LG
Sbjct: 327 ARGQLG 332
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 145 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 204
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 205 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 319
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 320 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 348
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 96 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 156 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 214
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 269
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 270 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 328 RGQLGTGHTCNVKCPSPVK 346
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 40 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 95
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 96 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 156 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 210
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 271 GAGSCGQLGHDSMND 285
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 197 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 256
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 257 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 314
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 315 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 347
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIR 90
LA ++ + +Q I G AVTS G VY+ G SG+LG G + P+ ++
Sbjct: 3569 LACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQ 3628
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
L I + +G + +S G+VYA+G G+ G + T + PQLV+SL +
Sbjct: 3629 GLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTH--SKPQLVQSLSDKC 3686
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
++ A G F +A +SR G +YT+ G RLGH + + P + G L N VV++A G
Sbjct: 3687 IIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG-LINYHVVKVACG 3745
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ C S V+S G G GKLGH K P IE + + + G+
Sbjct: 3746 SGDAQTM-CVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGI--IQIDCGSQF 3802
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ + +G + TWG G Y LGHG+ E PK V L K + +TG +++DG
Sbjct: 3803 SVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDG 3862
Query: 331 DVYSFGCGESASLG 344
+VY++G + LG
Sbjct: 3863 EVYAWGDNDEGQLG 3876
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VVY +G N GQL + + +P SL ++ Q G ++ G+VYA G
Sbjct: 3545 VVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYT 3604
Query: 123 SFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
G G K V +PQLV+ L NI V G LS G VY + G+D +
Sbjct: 3605 ESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGK 3664
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LG +P L+ +L + ++ IA G + A++ +Y+ G G G+LGHG
Sbjct: 3665 LGLGNRVTHSKPQ-LVQSLSDKCIIDIACGGFHSAAIS---RYGHLYTWGKGRYGRLGHG 3720
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D +P+L++ L+N V VA G+ A V D V +WG G YG LGH E
Sbjct: 3721 DYEDYLYPKLVQG--LINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISES 3778
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P +++L+ I + G + +S +G +Y++G G+ LGH
Sbjct: 3779 CKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGH 3825
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 141/311 (45%), Gaps = 8/311 (2%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-- 94
EA + + + G V+++G V+ G +S G+LG + PR I L
Sbjct: 2620 NEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFV 2679
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
I+ + +G M +S G+V ++G G+ +G T + +P+L++SL V
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILT--LDTPKLIDSLLAKRVFYI 2737
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G+ +A ++ +G +YT+ G RLGH E + P L+ + Q+A G
Sbjct: 2738 ACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPK-LVKEFVGKNITQVACGSRDA 2796
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA G VYS G G GKLG G P+ +E+ L+ + V + GA + +
Sbjct: 2797 QTLALDSEG-NVYSWGDGDFGKLGRGGSDGCCTPQKVER--LVGHRVVQIECGAQFSVAL 2853
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G+V TWG G Y LG G E P +V L V H+A G VS GDVY
Sbjct: 2854 TATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYC 2913
Query: 335 FGCGESASLGH 345
+G + G+
Sbjct: 2914 WGDNDHGQQGN 2924
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 8/291 (2%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
I V S+ VY +G N GQLG + RP +L ++ I+ G+ ++S+ G+
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGK 2646
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTF 173
V+ G S G G+ V+SP+ + L + A+ G LS +G+V ++
Sbjct: 2647 VFVCGDSSGGR--LGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSW 2704
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G D +LGH + ++ L+ +L V IA G + A+ S +Y+ G G
Sbjct: 2705 GDGEDGKLGH-GDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT---SDGELYTWGQGQ 2760
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LGH + P+L+++F N+ V + + +G V +WG G +G LG
Sbjct: 2761 YGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G + P+ V+ L + + + G + ++ G V+++G GE LG
Sbjct: 2821 GGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLG 2871
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+++ G VY++G G+LG G +P+ ++SL II A G +
Sbjct: 3640 SGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAA 3699
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G +Y +GK +G +G L P+LV+ L N VV+ A G + T ++ +
Sbjct: 3700 ISRYGHLYTWGKGRYGRLGHGDYEDYLY--PKLVQGLINYHVVKVACGSGDAQTMCVTSD 3757
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LGH+ + P + +L ++QI G + +AL+ + +Y
Sbjct: 3758 DNVWSWGDGDYGKLGHNISESCKLPCKI-ESLSGKGIIQIDCGSQFSVALSANGT---LY 3813
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + V + G+ H + DG V WG
Sbjct: 3814 TWGKGDYFRLGHGSSEHVRKPKPVSGLQ--GKKIVQFSTGSLHVLALTDDGEVYAWGDND 3871
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G + P+ + AL + V+ G +F
Sbjct: 3872 EGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSF 3908
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A++ G V S+G G+LGHG P+ I SL R+ A G+ +
Sbjct: 2687 SGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAA 2746
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSRE 167
I+ G++Y +G+ +G + + ++ +P+LV+ KNI V + T L E
Sbjct: 2747 ITSDGELYTWGQGQYGRLGHSDEVSQ--HTPKLVKEFVGKNITQVACGSRDAQTLALDSE 2804
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P + L VVQI G + +AL + V+
Sbjct: 2805 GNVYSWGDGDFGKLGRGGSDGCCTPQKV-ERLVGHRVVQIECGAQFSVALT---ATGQVW 2860
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LG G + P L+ Q +L+ + + A G H V G V WG
Sbjct: 2861 TWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHI--AVGTLHCIAVSTQGDVYCWGDND 2918
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P++V N++K V G
Sbjct: 2919 HGQQGNGTTNANQEPRLVTNFNNIKINRVGCG 2950
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+AVT KG VYS+G N G LGHG + P PI + + ++ + G +++ G
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVYT 172
++Y +GK + + +P+LV+S+ V + + G+ T LSREG V++
Sbjct: 565 KLYMWGK--------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFS 616
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F + N R G + +V P ++ E I + YC+ A V++ G G
Sbjct: 617 FEYRNSDR-GCDDKSLNVIPSMIVFDYE------IVSIYCHNDVNAVIDCANNVFTWGRG 669
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
LGH + P+ ++ L Q ++ + + G+V WG
Sbjct: 670 NNNMLGHNNSFRVNRPKEVK--FLSGKQVTSLSLADDYILALTDTGQVYCWG 719
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+++ G +Y++G +LGHG++E +P+P+ LQG +I+Q + G+
Sbjct: 3795 QIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLH 3854
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++D G+VYA+G + E + G + P+ + +LK + Q + G+
Sbjct: 3855 VLALTDDGEVYAWGDND--EGQLGDGTAHPIARPRPIAALKGKRIQQVSCGS-------- 3904
Query: 167 EGRVYTFSWGND 178
++F+W ++
Sbjct: 3905 ---AHSFAWASE 3913
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 226 VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
VY+ G G+LG G + P+L++ N+ V V +G H + G V
Sbjct: 3598 VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLN--NIIKVAVNSGGRHCLALSTTGEVY 3655
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG G G LG GN S P++VQ+L+D I +A G + + +S G +Y++G G
Sbjct: 3656 AWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYG 3715
Query: 342 SLGHNAIAD 350
LGH D
Sbjct: 3716 RLGHGDYED 3724
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++ G+VY++G + FG +G + + T P+ + + + VV + G F A ++ +
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPT-PEPIVAFSKLIVVMVSCGKDFCAAVTED 563
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G++Y WG ++ H + N L+ ++ V +++ G LA G V+
Sbjct: 564 GKLYM--WG---KILHSS--NCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGY-VF 615
Query: 228 SVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
S + + R D+K +I + + + V + AV+ V TWG G
Sbjct: 616 SF------EYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRG 669
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGH N + PK V+ L+ + ++ D +++ G VY +G
Sbjct: 670 NNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT-- 107
G H IAV+++G VY +G N GQ G+GTT PR + + I+I + G+ ++
Sbjct: 2897 VGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956
Query: 108 -------MLISDAGQVYAFGKDSFG 125
+L+S + KDS G
Sbjct: 2957 WKCPVLPLLMSHEHVQFTRIKDSMG 2981
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T+ G V+++G +LG G E RP + L+ + I A G
Sbjct: 2842 QIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLH 2901
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ +S G VY +G + G+ G T P+LV + NI + + G
Sbjct: 2902 CIAVSTQGDVYCWGDNDHGQQGNGT--TNANQEPRLVTNFNNIKINRVGCG 2950
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
S AVY G G+LG + + K P E L L+P+ + G+ +V +G+V
Sbjct: 2591 SEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEA--LTALKPIEIVGGSKSLFIVSNEGKVF 2648
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LG S P+ + L+ +K + V +G +S DG V S+G GE
Sbjct: 2649 VCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGE 2708
Query: 340 SASLGHNAI 348
LGH I
Sbjct: 2709 DGKLGHGDI 2717
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 5 RAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVV 64
+ I + M + E D+ +C +K L + RR + ++ G G +
Sbjct: 3908 KKIRELMADNENMDVLHECHDVFKREQDEQLV-QWMNRRPDDWTLSAGG-------SGTI 3959
Query: 65 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
Y +G N GQLG + P P +L +R +Q G ++ G++YA G +
Sbjct: 3960 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA- 4018
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLG 182
G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LG
Sbjct: 4019 -GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
H P ++ +L I VV IAAG + AC + +++ G G G+LGHG
Sbjct: 4078 HGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGHGDS 4133
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
D+ P+L+E Q + + +G + D V +WG G YG LG G + VP
Sbjct: 4134 EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 4193
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +L D+ + V G + +++ G VY++G G+ LGH
Sbjct: 4194 MKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L ++ VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTDLGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L +L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTDLGVVKVECGSQFSVALT 4218
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4279 GDNDEGQLGDGTTNAIQRPRLVAAL 4303
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS LG P+ ++SL I++ AA + + +S
Sbjct: 465 LILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIVKIAAHSDGHHYLALSAN 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+L+ +L VV A G+ ++A ++ EG
Sbjct: 515 GEVFSWGCGDGGRLGHG--DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + + P + G L+ + V+ ++ G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V TWG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D+ G PQLV+SL +
Sbjct: 449 LANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A LS G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VY++G G++ LGH
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH 692
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E L N+ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P+LI
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLALT 726
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G ++S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3284
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L N+ VVQIA L L+ VY+ +D P+L++ N
Sbjct: 449 LANLGVVQIACAEKRFLILS---RNGRVYT----------QAYNSDTLGPQLVQSLASRN 495
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA----I 314
+ + + H + +G V +WG G G LGHG+ PK++ AL+ +A +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVV 555
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 488 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 545
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 603
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 604 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQ-RVRSLEGIPLAQVAAGGAHSFALSL- 661
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 662 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 716
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 717 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776
Query: 339 ESASLG 344
LG
Sbjct: 777 ARGQLG 782
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 654
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 769
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 770 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 798
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 606 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 664
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 665 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 720
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 721 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 778
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 779 GQLGTGHTCNVKCPSPVK 796
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 545
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605
Query: 217 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
LA + ++ G G+LG G S+T + R +E L VAAG H+
Sbjct: 606 LA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 657
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V
Sbjct: 658 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717
Query: 333 YSFGCGESASLGHNAIAD 350
++FG G LGH+++ D
Sbjct: 718 FTFGAGSCGQLGHDSMND 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 706
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 707 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 764
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 765 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 797
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G D+ G+ G+ GT+ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G D+ G+ G+ GT+ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQ--LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ ++G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKNGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT---KNGGVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V++++G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G D+ G+ G+ GT+ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 245 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 19/313 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ +TS V+++G N++GQLG GTT P P + L + Q +AG ++
Sbjct: 77 AGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSRE 167
++D G+V+A+G +S G+ G T +P V+ L + V AA GN A L+ +
Sbjct: 135 LTDDGRVFAWGLNSSGQLGDGT--TADSRTPVQVQGLATDSTIKVVAAGGNHSLA-LTSD 191
Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
GRV F+WG ++ +LG+++ + P + G N V +AAG + LAL S
Sbjct: 192 GRV--FAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN--VTAVAAGGNHSLALT---SDGR 244
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G+LG G+ ++ P L+ +PV V+AG H+ + QDG V WG
Sbjct: 245 IYAWGLNSSGQLGDGTTSNSSTPVLVAGLPA-GSKPVAVSAGKDHSLALMQDGTVYAWGG 303
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG+G +P V L +V A+ D + ++ DG VY++G S LG
Sbjct: 304 NSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSD--SLALTSDGYVYAWGLNSSGQLGD 361
Query: 346 NAIADGQVCSLLF 358
++ +F
Sbjct: 362 GTTSNRNTPVRVF 374
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 127/258 (49%), Gaps = 11/258 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 104
+Q AG HS+A+T G V+++G NSSGQLG GTT + P ++ L I+ AAG
Sbjct: 123 AQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGG 182
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++ G+V+A+GK+S G + G T + P V+ L AA GN A L
Sbjct: 183 NHSLALTSDGRVFAWGKNSSG--QLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLA-L 239
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +GR+Y + + +LG T N P + G V ++AG + LAL +
Sbjct: 240 TSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT-- 297
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VY+ G G+LG+G+ T + P ++ L N+ V+AG + + DG V WG
Sbjct: 298 -VYAWGGNSYGQLGNGTTTASEMP--VQVTGLANV--TAVSAGGSDSLALTSDGYVYAWG 352
Query: 285 WGRYGCLGHGNEECESVP 302
G LG G + P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+AG +++++ V+A+G ++ G+ G + +P + L + V Q + G
Sbjct: 76 SAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTP--AQGLPS--VAQVSAGESH 131
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ L+ +GRV+ + + +LG T + P + G + + +AAG + LAL
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALT-- 189
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
S V++ G G+LG+ S D P Q Q L VAAG H+ + DGR+
Sbjct: 190 -SDGRVFAWGKNSSGQLGNNSTVDSSIPV---QVQGLPANVTAVAAGGNHSLALTSDGRI 245
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
WG G LG G S P +V L K + V+ G + + +DG VY++G
Sbjct: 246 YAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305
Query: 340 SASLGH 345
LG+
Sbjct: 306 YGQLGN 311
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 264
++AG + L L S V++ G G+LG G+ T + P + P V V
Sbjct: 75 VSAGGSHSLVLT---SDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL------PSVAQV 125
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV-ATGDYTT 323
+AG H+ + DGRV WG G LG G P VQ L I V A G +
Sbjct: 126 SAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHS 185
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQV 353
++ DG V+++G S LG+N+ D +
Sbjct: 186 LALTSDGRVFAWGKNSSGQLGNNSTVDSSI 215
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 AKGQLG 328
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGY 344
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 22/263 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ GQ + +GK+S G+ EY Q SPQ V SL+ I + Q A G + LS
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQA-----SPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G V+ + N +LG E + P H L L VV I+ G + L SG
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG- 261
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
V++ G G G+LGH S DE +PR + +L+ + +A G H A V G + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 284 GWGRYGCLGHG---NEECESVPK 303
G G G LG G N +C S K
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L LR ++A C R + G H + + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LATDGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G + + + G+VY G ++ G+ + +G + P+ + +L + ++ A
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
LA + ++ G G+LG G S+T + R +E L VAAG H+
Sbjct: 152 LA---TDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 203
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 333 YSFGCGESASLGHNAIAD 350
++FG G LGH+++ D
Sbjct: 264 FTFGAGSCGQLGHDSMND 281
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G VY +G N GQLG + P P +L +R Q G ++ G++YA G
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGY 2847
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 2848 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2905
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 2906 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGGLYTWGKGRYGRLGH 2961
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + +D V +WG G YG LG G +
Sbjct: 2962 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGC 3021
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP V AL + A+ V G + +++ G VY++G G+ LGH
Sbjct: 3022 KVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3067
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA +Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 2816 EALAALRPAQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2875
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 2876 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 2933
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 2934 AGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 2992
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P ++ L L V V G+ + +
Sbjct: 2993 TL-CLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDA--LTGLGAVKVECGSQFSVALT 3049
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3050 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3109
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3110 GDNDEGQLGDGTTNAIQRPRLVAAL 3134
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 2882 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2941
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 2942 VTAAGGLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTED 2999
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + L + V++ G + +AL SG AVY
Sbjct: 3000 DTVWSWGDGDYGKLGRGGSDGCKVPMK-VDALTGLGAVKVECGSQFSVALT--KSG-AVY 3055
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3056 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3113
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 3114 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N+ +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 1828 NAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAV 1887
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L +D G+V+++G+ G+ G P+L+E+LK+ + A G+
Sbjct: 1888 HSGGRHATALTAD-GKVFSWGEGDDGK--LGHFSRXNCDKPRLIEALKSRRIRDIACGSS 1944
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L VVQ+A G LA
Sbjct: 1945 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLVGHRVVQVACGSRDAQTLAL 2003
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2004 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2059
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2060 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2119
Query: 339 ESASLGH 345
+ G+
Sbjct: 2120 DHGQQGN 2126
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + +Q A G+ ++
Sbjct: 1785 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTV 1844
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G GV + V P+ V +L + V + A+ G L+ +G+V
Sbjct: 1845 EGKVYACGEATNGRLGLGV-SSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKV 1903
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L++ + IA G + AL S +Y+ G
Sbjct: 1904 FSWGEGDDGKLGHFSRXNCDKPR-LIEALKSRRIRDIACGSSHSAALT---SSGELYTWG 1959
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ L+ + V VA G+ A + +G V +WG G +
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2018 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2074
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T+ G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 1889 SGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAA 1948
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L VVQ A G + T L+ E
Sbjct: 1949 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLVGHRVVQVACGSRDAQTLALTDE 2006
Query: 168 GRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2058
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2059 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 2115
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2116 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2152
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 8/220 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA R G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+
Sbjct: 1929 EALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRV 1988
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ ++D G V+++G FG + G G++ PQ +E L V Q
Sbjct: 1989 VQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNIERLNGQGVCQIE 2046
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L++ G V+T+ G+ RLGH ++ + +P + G L +V +A G + L
Sbjct: 2047 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCL 2105
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
A+ VY+ G G+ G+G+ T + P L++ +
Sbjct: 2106 AVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2142
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + Q+ G L A+
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTP-CEALAALRPAQLIGGEQTLFAVT-- 2837
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 2838 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ G +Y++G G
Sbjct: 2897 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRY 2956
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 2957 GRLGHSDSED 2966
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2100 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2157
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G+N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+ AG + AL+
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVVAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++S G+ G + SPQ V SL+ I + Q G + LS G
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VV AG H+ +
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+V PQ+ + + V + A G + L +G VYT +LGH E N E
Sbjct: 21 VVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQ--- 77
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 254
+G L + +V +A G + LAL+ Q ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 312
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
V G +F +S G V+ +G + LG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 25/288 (8%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
HS AVT G +Y++G +++ G LGHG + W P+ + L+G+R+ A G T+L+
Sbjct: 186 HSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLV 245
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSR 166
+ GQ+++FG +FG +G + K + P+ VESLK + ++AA G + TA V+SR
Sbjct: 246 TSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSR 303
Query: 167 --------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G+ RLGH + + P + L + Q+A G+ +AL
Sbjct: 304 YSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTVALT 362
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ +Y++G G+LG T RL +L V+ GA+H A + G
Sbjct: 363 ---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALTSKG 415
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
VCTWG G G LGHG+ E VP +V+AL D + V+ G T +
Sbjct: 416 DVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 22/288 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR +RSL + + Q A G T L++ G+V+++G++S G +GV V PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + V A G + + +++ G +YT+ G N LGH + P + G LE +
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + + + S ++S G G G LGHG R PR +E L L+ +
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G LGHG++E + VP V AL D
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
VA G T ++ G +Y+ G LG + A G++ +L L
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMGSVSYGQLG-DPQATGRLPGVLRL 393
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H++ VTS G ++SFG + G LGHG + PR + SL+G++ ++AA G
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292
Query: 106 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + S +G+++ +G +G + KLV P V +L + Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ T L+ G +YT + +LG +P P + L + +++ G +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+ AL S V + G G G+LGHG D P L+E + ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+ KL RTD PR + +L++Q +A G H A+V + G V +WG G L
Sbjct: 98 GVTKKLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHTALVTRQGEVFSWGEESGGRL 155
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
GHG + + P+++ +L +VA G+Y + V++ GD+Y++G G
Sbjct: 156 GHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDG 202
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 28/312 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
S +AG +S+A+ + G ++++G N G LGH T+ E P P+ +L G+ I+QAA G
Sbjct: 47 SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
+ + D G+ YA+G + +G EAE GT+ + P + V Q A G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
+ VL+++G V+T+ G P D++ P + G LEN+ V+ + A
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA G+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G V WG G +G LG G+++ VP+ V+ L I V+ G + ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330
Query: 334 SFGCGESASLGH 345
S+G G+ LG+
Sbjct: 331 SYGRGDHGRLGY 342
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+T G+++++G+N GQLG G T+ +P + L + ++ AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++ G+VYA+G+ G +G + + PQ VE L ++Q + G +
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR++++ G+ RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
AV + G G G+LG G +E R + L + VV AG+ ++ + DGR+ TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69
Query: 285 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
W + G LGH E + ES P V AL V + A G + V + G Y++G E
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 344 GHNA 347
G A
Sbjct: 130 GEEA 133
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 170
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 228
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 229 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 286
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 287 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 341
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 342 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401
Query: 339 ESASLG 344
LG
Sbjct: 402 ARGQLG 407
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 220 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 279
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 394
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 395 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 423
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 231 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 289
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 344
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 345 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 403 RGQLGTGHTCNVKCPSPVK 421
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 170
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 231 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 285
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 346 GAGSCGQLGHDSMND 360
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 272 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 331
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 332 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 389
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 390 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 422
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R IQ G ++ G++YA G
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3766 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3823
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 3824 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 3879
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3880 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3939
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3940 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3985
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3800 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 3859
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 3860 ITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 3917
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3918 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3973
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3974 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4031
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4032 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4068
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3743 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3802
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3803 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACI 3860
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 3861 TAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQTL-CLTDDD 3918
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3919 TVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWG 3976
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3977 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4036
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 4037 DGTTNAIQRPRLVAAL 4052
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 2804
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 2805 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2862
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2863 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 2921
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2922 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2977
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 2978 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3037
Query: 340 SASLGH 345
G+
Sbjct: 3038 HGQQGN 3043
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2702 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2761
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 2762 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 2876
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G ++S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2806 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2865
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2866 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2975
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 2976 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3032
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3069
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3008
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3009 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066
Query: 155 AIGN 158
A G+
Sbjct: 3067 ACGS 3070
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 34/172 (19%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ + Q A +LSR GRVY ++ +D +G
Sbjct: 354 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVG-------------- 399
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
+ A + + V+S G G GKLG G K P+LIE+ Q
Sbjct: 400 ----------VVAVFSLIFG--------QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 441
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
L++ V V G+ + + +DG+V +WG G LGHG EE PK+++ L
Sbjct: 442 LDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + +Q+ G L A+
Sbjct: 3699 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPIQLIGGEQTLFAVT-- 3755
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3756 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3814
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + +A G + ++ GD+Y++G G
Sbjct: 3815 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 3874
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 3875 GRLGHGDSED 3884
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 22/134 (16%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKD-----------------SFGEAEYGVQ 132
L + I Q A R +++S G+VY A+ D S+G+ +YG
Sbjct: 363 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKL 422
Query: 133 G---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G + +P+L+E L+++ VV+ G+ F+ L+++G+VY++ G++ RLGH TE +
Sbjct: 423 GRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 482
Query: 190 VEPHPLLGTLENIP 203
P L G +P
Sbjct: 483 RYPKLLEGLQATLP 496
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468
Query: 338 GESASLGH 345
G++ LGH
Sbjct: 469 GDNQRLGH 476
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3017 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3074
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 32 RFLLA---GEACCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 86
RFL+ G + NS + G +AV S G V+S+G G+LG G ++ P
Sbjct: 377 RFLILSRNGRVYMQAYNSDTLVG---VVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTP 433
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+E L
Sbjct: 434 KLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGL 491
Query: 147 K 147
+
Sbjct: 492 Q 492
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 28/306 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV G V+S+G N+ GQLG GTT + P ++ L G+ I +AG T+
Sbjct: 1034 AGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGVTAI--SAGDAHTVA 1091
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G++S+G+ G T +P V+ L + + A G+ T L ++G
Sbjct: 1092 LRRDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1147
Query: 170 VYTF---SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
V+ + SWG D H P V+ L G V+ IAAG + +AL +
Sbjct: 1148 VWAWGRNSWGQLGDGTTTHRATP--VQVQGLTG------VIAIAAGSLHTVALRQDGT-- 1197
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG G+ T P ++ + +AAG +H A V QDG TWG
Sbjct: 1198 -VWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGV----TTIAAGYFHTAAVRQDGTAWTWG 1252
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +G LG G + P VQ L V A+ A G T VV EDG V+++G LG
Sbjct: 1253 FNLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLG 1310
Query: 345 HNAIAD 350
+ + D
Sbjct: 1311 NGSSTD 1316
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 18/301 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ G V+++G NS GQLG GTT P ++ L G+ I AAG+ T+
Sbjct: 1084 AGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1141
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G++S+G+ G T +P V+ L + + A G+ T L ++G
Sbjct: 1142 LRQDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1197
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + +LG T + P + G V IAAGY + A+ + G A ++
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQVQGL---TGVTTIAAGYFHTAAV--RQDGTA-WTW 1251
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G L G+LG G+ TD P ++ ++ +AAG H VVG+DG V WG
Sbjct: 1252 GFNLWGQLGDGTFTDRATPVQVQGLTGVS----ALAAGYAHTVVVGEDGTVWAWGNNSGT 1307
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG+G+ S P V+AL A +A G + T +S DG + +G +G A
Sbjct: 1308 QLGNGSSTDRSTPVQVEAL--TGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTA 1365
Query: 350 D 350
D
Sbjct: 1366 D 1366
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G H++A+ G ++++G+NSSGQLG GTT + P ++ L G+ I AAG
Sbjct: 325 AIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTGVTAI--AAGYLY 382
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ G V+A+G + +G+ G +L +P V+ L + + A G +T +
Sbjct: 383 TVASKQDGTVWAWGDNEWGQLGDGTTTRRL--TPVQVQGLTGVTAI--AAGYLYTVASKQ 438
Query: 167 EGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V+ +WG++ R LG P + G LE I IAA LL +A + G
Sbjct: 439 DGTVW--AWGDNKRSQLGEGAVSQRHTPGEVQG-LEGITA--IAA--SNLLTVAVRQDGT 491
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
V++ G G+LG G+ T R + Q+ L V VAA +H V QDG V W
Sbjct: 492 -VWAWGDNARGQLGDGTTT-----RRLTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAW 545
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G +G LG G S P VQ L V AI A G T + +DG V+++G L
Sbjct: 546 GVGFWGQLGDGTGMDRSTPVQVQGLTGVTAI--AAGSNHTVALRQDGTVWAWGFNNYGQL 603
Query: 344 GHNAIA 349
G A
Sbjct: 604 GDGTTA 609
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 145/303 (47%), Gaps = 22/303 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG G ++A+ G ++++GSNS GQLG+GTT +RP ++ L G+ I AA+G T+
Sbjct: 278 AGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI-AASGI-HTVA 335
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G ++A+G +S G+ G T + +P V+ L + + A G +T ++G
Sbjct: 336 LRQDGTLWAWGNNSSGQLGDGT--TTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGT 391
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++ +LG T + P + G V IAAGY Y +A + G V+
Sbjct: 392 VW--AWGDNEWGQLGDGTTTRRLTPVQVQGL---TGVTAIAAGYLY--TVASKQDGT-VW 443
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G +LG G+ + P ++ + + +AA V QDG V WG
Sbjct: 444 AWGDNKRSQLGEGAVSQRHTPGEVQGLEGI----TAIAASNLLTVAVRQDGTVWAWGDNA 499
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G P VQ L V A VA DY V +DG V+++G G LG
Sbjct: 500 RGQLGDGTTTRRLTPVQVQGLAGVTA--VAASDYHLVAVRQDGTVWAWGVGFWGQLGDGT 557
Query: 348 IAD 350
D
Sbjct: 558 GMD 560
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 22/297 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A + G V+++G NSSGQLG GT+ + + P ++ L G+ + AAG +
Sbjct: 128 AGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAV--AAGRNHSAA 185
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G + G+ G +L +P V+ L + + A + T L ++G
Sbjct: 186 LGQGGTVWTWGDNLVGQLGDGTSTQRL--TPVQVQGLTGVIAISA--NDSETVALRQDGT 241
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN++ +LG T P +LG V IAAG + +AL + ++
Sbjct: 242 VW--AWGNNSSGQLGDGTTTVRFTPVQVLGL---TGVTAIAAGGGFAVALRQDGT---LW 293
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG+G+ P EQ Q L + A+G H + QDG + WG
Sbjct: 294 AWGSNSRGQLGNGTTFGSYRP---EQVQGLTGVTAIAASGI-HTVALRQDGTLWAWGNNS 349
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG G P VQ L V AI A G T +DG V+++G E LG
Sbjct: 350 SGQLGDGTTTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGTVWAWGDNEWGQLG 404
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 24/304 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ G V+++G N+ GQLG GTT P + + G I AAG T+
Sbjct: 578 AGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVAI--AAGGSHTVA 635
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G + +G+ G T SP V+ L ++ + A N T + ++G
Sbjct: 636 LLQDGTVWTWGYNIWGQLGDGT--TTHRHSPVQVQGLADVIAI--ATNNGHTVAVRQDGT 691
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----A 225
V+T+ + +LG T + P + G + + L + Q M
Sbjct: 692 VWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAI----------LTSSSQTVAMRQDRT 741
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+++ G G+LG G+ T P ++ + +AAG +H A GQDG + TWG
Sbjct: 742 LWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGL 797
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG G +P VQ L A +A GD T V +DG V+++G S LG
Sbjct: 798 NSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGD 857
Query: 346 NAIA 349
A
Sbjct: 858 GTTA 861
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 140/307 (45%), Gaps = 28/307 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTM 108
AG H A G ++++G NS GQLG G + P ++ +QG+ + A AAG T+
Sbjct: 982 AGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQ-VQGLTGVAAIAAGFSHTL 1040
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+++G +++G+ G L +P V+ L + + A G+ T L R+G
Sbjct: 1041 AVRQDGTVWSWGGNAYGQLGDGTTAQSL--TPVQVQGLTGVTAISA--GDAHTVALRRDG 1096
Query: 169 RVYTF---SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
V+ + SWG D H P V+ L G V+ IAAG + +AL +
Sbjct: 1097 TVWAWGRNSWGQLGDGTTTHRATP--VQVQGLTG------VIAIAAGSLHTVALRQDGT- 1147
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G+LG G+ T P ++ + + +AAG+ H + QDG V W
Sbjct: 1148 --VWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV----IAIAAGSLHTVALRQDGTVWAW 1201
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G+ G LG G P VQ L V I A G + T V +DG +++G L
Sbjct: 1202 GFNDLGQLGDGTTTRRLTPAQVQGLTGVTTI--AAGYFHTAAVRQDGTAWTWGFNLWGQL 1259
Query: 344 GHNAIAD 350
G D
Sbjct: 1260 GDGTFTD 1266
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 135/285 (47%), Gaps = 22/285 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+++A G V+++G N GQLG GTT P ++ L G+ I AAG T+
Sbjct: 382 YTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAI--AAGYLYTVASKQD 439
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + ++ G +P V+ L+ I + A+ N T + ++G V+
Sbjct: 440 GTVWAWGDNK--RSQLGEGAVSQRHTPGEVQGLEGITAIAAS--NLLTVAVRQDGTVW-- 493
Query: 174 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WG++AR LG T + P + G V +AA +L+A+ + V++ G
Sbjct: 494 AWGDNARGQLGDGTTTRRLTPVQVQGLAG---VTAVAASDYHLVAVRQDGT---VWAWGV 547
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G+LG G+ D P ++ + +AAG+ H + QDG V WG+ YG L
Sbjct: 548 GFWGQLGDGTGMDRSTPVQVQGLTGV----TAIAAGSNHTVALRQDGTVWAWGFNNYGQL 603
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G G P VQ A+ +A G T + +DG V+++G
Sbjct: 604 GDGTTAGHLTP--VQVPGVTGAVAIAAGGSHTVALLQDGTVWTWG 646
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 26/294 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++AV G V+++G+N GQLG GTT R P++ + G I AAG T+ S
Sbjct: 84 HTLAVRQDGTVWAWGNNDDGQLGDGTTTR--RFSPVQVMTGATAI--AAGIYHTVAASQD 139
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G++S G+ G + SP V+ L + V A G +A L + G V+T
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRF--SPVQVQGLTGVTAV--AAGRNHSAALGQGGTVWT- 194
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
WG++ +LG T + P + G V+ I+A +AL + V++ G
Sbjct: 195 -WGDNLVGQLGDGTSTQRLTPVQVQGL---TGVIAISANDSETVALRQDGT---VWAWGN 247
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G+ T P Q+L L V +AAG A + QDG + WG G
Sbjct: 248 NSSGQLGDGTTTVRFTP-----VQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQ 302
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG+G P+ VQ L V AI A+G + T + +DG ++++G S LG
Sbjct: 303 LGNGTTFGSYRPEQVQGLTGVTAI-AASGIH-TVALRQDGTLWAWGNNSSGQLG 354
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ G V+++G NS GQLG GTT P ++ L G+ I AAG+ T+
Sbjct: 1134 AGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1191
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G +L +P V+ L + + A G F TA + ++G
Sbjct: 1192 LRQDGTVWAWGFNDLGQLGDGTTTRRL--TPAQVQGLTGVTTI--AAGYFHTAAVRQDGT 1247
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+T+ + +LG T + P + G V +AAGY + + + + V++
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQVQGL---TGVSALAAGYAHTVVVGEDGT---VWAW 1301
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 287
G G +LG+GS TD P +E +AAG +H + DG WGWGR
Sbjct: 1302 GNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSLAAGRFHTVAMSPDG--AGWGWGRNN 1355
Query: 288 YGCLGHGNEECESVP 302
G +G G P
Sbjct: 1356 LGQVGDGTTADRPTP 1370
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 16/302 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H A G ++++G NS GQLG G P ++ L AAG T+
Sbjct: 778 AGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVA 837
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G L V+ L ++ + A G + A ++G
Sbjct: 838 VRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAM--AAGGYHMAAAGQDGT 895
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++T+ + +LG + P + G ++ V +AAG Y +A A Q +++
Sbjct: 896 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAG-GYHMAAAGQDG--TLWTW 949
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G + P ++ + +AAG +H A GQDG + TWG YG
Sbjct: 950 GLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYG 1005
Query: 290 CLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
LG G ++ V VQ L V AI A G T V +DG V+S+G LG
Sbjct: 1006 QLGGGPLSQSLTPVQVQVQGLTGVAAI--AAGFSHTLAVRQDGTVWSWGGNAYGQLGDGT 1063
Query: 348 IA 349
A
Sbjct: 1064 TA 1065
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-D 112
++A+ ++++G N GQLG GTT R P++ +QG+ + A A G M +
Sbjct: 732 QTVAMRQDRTLWAWGDNHWGQLGDGTTTR--RLTPVQ-VQGLMDVTAMAAGGYHMAAAGQ 788
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G ++ +G +S+G+ G +L+ P V+ L + A G+ T + ++G V+
Sbjct: 789 DGTLWTWGLNSYGQLGGGPLSYRLL--PVQVQGLTSATATAIAAGDSHTVAVRQDGTVW- 845
Query: 173 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+WG++ +LG T + P + ++ + V A Y +A A Q +++ G
Sbjct: 846 -AWGSNFSGQLGDGTTAQSLTPVQV--QVQGLMDVTAMAAGGYHMAAAGQDG--TLWTWG 900
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G + P ++ + +AAG +H A GQDG + TWG YG
Sbjct: 901 LNSYGQLGGGPLSYRLLPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 956
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G +P VQ L V A+ A G Y +DG ++++G LG
Sbjct: 957 LGGGPLSYRLLPVQVQGLMSVTAM--AAGGYHMAAAGQDGTLWTWGLNSYGQLG 1008
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 107/266 (40%), Gaps = 25/266 (9%)
Query: 87 RPIRSLQGIRIIQAAAG-------AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
R LQG A AG T+ + G V+A+G + G+ G + S
Sbjct: 58 RTAPGLQGANAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRF--S 115
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P V+ + + A I + T S++G V+T+ + +LG T P + G
Sbjct: 116 P--VQVMTGATAIAAGI--YHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGL- 170
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
V +AAG + AL G V++ G L G+LG G+ T P ++ +
Sbjct: 171 --TGVTAVAAGRNHSAALG---QGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGV-- 223
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ ++A + QDG V WG G LG G P V L V AI A G
Sbjct: 224 --IAISANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAI--AAG 279
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGH 345
+ +DG ++++G LG+
Sbjct: 280 GGFAVALRQDGTLWAWGSNSRGQLGN 305
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 146/296 (49%), Gaps = 10/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S VV S+G GQLGHG T++ P + +L +I+ GA T+
Sbjct: 22 AGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ +VY++G FG +G + PQ + +L+ + + Q A G+ ++ EG
Sbjct: 82 YSESKVEVYSWGWGDFGRLGHGNSSDLFI--PQPIRALQGLRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P E+ + + V+VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRCIP---EKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKY 252
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ + VP +QA +D V+ G T ++ G +Y +G + +G
Sbjct: 253 GQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVG 308
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 12/298 (4%)
Query: 49 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G H++A + SK VYS+G G+LGHG + + + P+PIR+LQG+RI Q A G
Sbjct: 73 VCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHC 132
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++ G+V ++G++ G+ G LV PQ +++ + + + A G + ++
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITEN 190
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G +Y + WG LG + P + +++ +V +A G+ + ++++ S +Y
Sbjct: 191 GELYGWGWGRYGNLGLGDRNDRCIPEKV--SVDCDKMVLVACGWRHTISVS---SSGELY 245
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
+ G G+LGHG D P ++ F + + + +G W H + G++ WGW
Sbjct: 246 TYGWSKYGQLGHGDCKDHLVPHKLQAF---SDKLICQVSGGWRHTMALTTGGQLYGWGWN 302
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++G +G G+ P V+ +D K ++ G T V+E +VYS+G G + LG
Sbjct: 303 KFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLG 360
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G++Y +G +G G + + + V+ K + V A G T +S
Sbjct: 184 SVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLV---ACGWRHTISVSS 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L + + + Q++ G+ + +AL +G +
Sbjct: 241 SGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKL-ICQVSGGWRHTMALT---TGGQL 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + + Q V + W H V + V +WG
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGR 353
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G+ + PK+++AL+
Sbjct: 354 GTNGQLGIGDTIDWNYPKIIEALS 377
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 129/266 (48%), Gaps = 15/266 (5%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P P R R++ +AG ++ + V ++G+ G+ +G +L+ P + +
Sbjct: 11 PPPPR-----RVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL--PTQLSA 63
Query: 146 LKNIFVVQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
L +V G T S VY++ WG+ RLGH + P P+ L+ + +
Sbjct: 64 LDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIR-ALQGLRI 122
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
QIA G + LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +V
Sbjct: 123 KQIACGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIK--MV 177
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
AAGA H+ + ++G + WGWGRYG LG G+ +P+ V D K + VA G T
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCD-KMVLVACGWRHTI 236
Query: 325 VVSEDGDVYSFGCGESASLGHNAIAD 350
VS G++Y++G + LGH D
Sbjct: 237 SVSSSGELYTYGWSKYGQLGHGDCKD 262
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P Q L+ Q +V
Sbjct: 17 VLLISAGGSHSVALI---SGNVVCSWGRGEDGQLGHGDTDDRLLP---TQLSALDAQQIV 70
Query: 264 -VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
V GA H + V +WGWG +G LGHGN +P+ ++AL ++ +A GD
Sbjct: 71 SVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDS 130
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV 162
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ + G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+S+G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ++ GY + LAL+ V+S G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2223
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G+ GT+ V++P L+ES++++FV + A+ G LS EG VY+
Sbjct: 2224 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYS 2281
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L I VV IAAG + AC +YS G G
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPR-VVESLRGIEVVDIAAGGAHS---ACITVAGDLYSWGKG 2337
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LGHG D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2397
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2398 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 2452
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR + SL+GI ++ AAG +
Sbjct: 2265 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSAC 2324
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y++GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 2325 ITVAGDLYSWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 2382
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 2383 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 2438
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 2439 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 2497 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 2536
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + +
Sbjct: 2199 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFV 2258
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P++VESL+ I VV A
Sbjct: 2259 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDIA 2316
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +Y++ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 2317 AGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 2375
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 2376 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 2432
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 2433 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 2492
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 2493 GDNDEGQLGDGTTNAIQRPRLVAAL 2517
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ G PQLV+ L +
Sbjct: 153 LANLGVTQIACAEKRFLILSRNGRVYVQAYNSDTLG--------------PQLVQGLASR 198
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI V A L+ G V+++ G+ RLGH EP L G V
Sbjct: 199 NIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 258
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 259 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 315
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 316 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH 396
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+V+++G G +G T + P+++
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG--DTVPLEEPKMI 246
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+L VV A G+ ++A ++ EG +YT+ GN RLGH + + P + G L
Sbjct: 247 SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-L 305
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ ++ G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 306 KGLKVIDVSCGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 364
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K + VA G
Sbjct: 365 --VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAG 422
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 423 STHCLALTEDSEVHSWGSND 442
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 264 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 323
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 324 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 381
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ VV +AAG + LAL
Sbjct: 382 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLAL 429
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 119/236 (50%), Gaps = 13/236 (5%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+ +G KD G G++G+K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 1150 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1204
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ RLG V + L N V ++A A+A G V+S G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 1263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLGH SR + PRLIE + ++ + A G+ H+A + G + TWG G YG L
Sbjct: 1264 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAAITSSGELYTWGLGEYGRL 1321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
GHG+ + PK+V+ L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 1322 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 1377
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 11/295 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 1140 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 1199
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 1200 EGKVYACGEATNGRLGLGIS-SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 1258
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 1259 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 1314
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 1315 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ L
Sbjct: 1373 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVY ++ +D LG L+
Sbjct: 144 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDT-LGPQ----------LV 192
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V++AA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 193 QGLASRNIVKVAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 248
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 249 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 308
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 309 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 344
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 270
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 271 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 328
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 329 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 384
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + V VAAG+ H + +D V +WG
Sbjct: 385 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 439
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
N++C+ P + L+ + +A G +F S
Sbjct: 440 ------SNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSFAWS 482
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 1183 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAV 1242
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 1243 HSGGRHAMALTVDGKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1300
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 1301 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 1359
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1360 DEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 1415
Query: 280 VCTWGWGRYGCL 291
V TWG G +G L
Sbjct: 1416 VWTWGRGDFGEL 1427
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 169 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 1148 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 1204
Query: 228 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1264
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 1265 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 1323
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ VV A G+ L+ +
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 435 VH--SWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ V + H + G V +WG G G LGHG+ P
Sbjct: 184 SDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEP 243
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 244 KMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 302
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH + E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPELIGALAGQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRV-KSLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + +G+K P+L+ +L +V A G + LS +G+V+++ G+D +LG
Sbjct: 64 GQLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
T + V L+ L ++QI+ G + LALA + ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+ ++ + L VAAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPL--AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 287 RYGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
VA G H+ + +DG V T G G LGH +E S P+++ AL +HVA G+ +
Sbjct: 39 VACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEG--SKPELIGALAGQHIVHVACGESHS 96
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADG 351
+S+ G V+S+G G LG I D
Sbjct: 97 VALSDQGQVFSWGAGSDGQLGLTTIEDA 124
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 162/297 (54%), Gaps = 21/297 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ AVT+ G +Y++G ++++G LGHG+T W P+ + L+G+++
Sbjct: 315 NVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTV 374
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ +GQ+Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 375 SCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 432
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+A + + G+++T+ G+ RLGH ++P + +L + + A G+
Sbjct: 433 SAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP-TCVPSLIDYNFHKSACGH 491
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L SG +++VG + G+LG+ + D ++PRL+E ++ V VA G++H
Sbjct: 492 TLTIGLTT--SGH-MFTVGSSVYGQLGNPN-NDGRYPRLVED-KVGGGGVVEVACGSYHV 546
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
AV+ G V TWG G G LGHG+ VP +V+AL D +A G T +S+
Sbjct: 547 AVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTAAISQ 603
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 20/301 (6%)
Query: 69 SNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
S S G + G G T + P+P+ S + + A G LI+ +V+ +G++ G
Sbjct: 235 SGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRL 294
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHT 185
+G GT + P+L+ESL V A G F T ++ G +YT+ G N LGH +
Sbjct: 295 GHGA-GTSIF-QPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS 352
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
+ P + G LE + V ++ G + + S +Y+ G G G LGHG+R
Sbjct: 353 TVSHWIPKRVSGPLEGLQVSTVSCGTWHTALIT---SSGQLYTFGDGTFGALGHGNRETI 409
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNE 296
+P+ +E L L+ + V+ G WH+A V G++ TWG G LGHG+
Sbjct: 410 SYPKEVE--SLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDR 467
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ P V +L D A G T ++ G +++ G LG N DG+ L
Sbjct: 468 SAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLG-NPNNDGRYPRL 526
Query: 357 L 357
+
Sbjct: 527 V 527
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 12/315 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ +T + V+++G SG+LGHG ++PR + SL + A G T +
Sbjct: 270 GVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAV 329
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGR 169
+ G +Y +G + G T P+ V L+ + V + G + TA+++ G+
Sbjct: 330 TATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQ 389
Query: 170 VYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+YTF G LGH P +VE L T+ V +A ++ S
Sbjct: 390 LYTFGDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSG 449
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCT 282
+++ G G +LGHG R+ + P + N + H +G G + T
Sbjct: 450 KLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFH----KSACGHTLTIGLTTSGHMFT 505
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G YG LG+ N + V + + VA G Y V++ G+VY++G G +
Sbjct: 506 VGSSVYGQLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGR 565
Query: 343 LGHNAIADGQVCSLL 357
LGH IAD +V +L+
Sbjct: 566 LGHGDIADRKVPTLV 580
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 23 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L I+ A G + +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQ--LGL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P++++ L ++Q + GN+ + L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQRV-RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 250 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G + G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAG--QLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G ++
Sbjct: 92 GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G LS G+++++ G+D +LG T + V ++ L ++Q++ G + LA
Sbjct: 92 GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 21/295 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ AVT+ G +Y++G ++++G LGHG+ W P+ + L G+ +
Sbjct: 131 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTV 190
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ +GQ+Y FG +FG +G + + + P+ VESLK + + + G +
Sbjct: 191 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 248
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
TA + + G+++T+ G+ RLGH + ++P + +L + + A G+
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCIPSLIDYNFHKAACGH 307
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L + +++VG + G+LG+ D ++PRL+E+ QL V VA G++H
Sbjct: 308 TLTIGLT---TSGHIFTVGSSVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHV 362
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
AV+ G V TWG G G LGHG+ VP +V+AL D VA G T +
Sbjct: 363 AVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAI 417
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 19/291 (6%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GTT + P+P+ S + + A G L++ +V+ +G++ G +G GT V
Sbjct: 61 GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGT-GTN-V 118
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPL 195
P+LVESL V A G F T ++ G +YT+ G N LGH + + P +
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV 178
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G L+ +PV ++ G + + S +Y+ G G G LGHG+R +P+ +E
Sbjct: 179 SGPLDGLPVSTVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE--S 233
Query: 256 LLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
L L+ + V+ G WH A V G++ TWG G LGHG+ + P +
Sbjct: 234 LKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIP 293
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+L D A G T ++ G +++ G LG N DG+ L+
Sbjct: 294 SLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLG-NPNNDGRYPRLV 343
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 114 GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
G +Y +G + + Y T V P+ +ES + V A G A+++
Sbjct: 35 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
R+ V F+WG + RLGH T N +P L+ +L V IA G + A+
Sbjct: 95 RQSEV--FTWGEECSGRLGHGTGTNVFQPR-LVESLSICNVELIACGEFHTCAVTAT-GD 150
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+ + G G LGHGS P+ + L L V+ G WH A++ G++ T+
Sbjct: 151 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSTVSCGTWHTALITSSGQLYTF 209
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYS 334
G G +G LGHGN S PK V++L ++ I V+ G + T V E G +++
Sbjct: 210 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 269
Query: 335 FGCGESASLGH 345
+G G+ LGH
Sbjct: 270 WGDGDKYRLGH 280
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 4130
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L V + V G + +++ G VY++G G+ LGH
Sbjct: 4191 KVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L + V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGVGVVKVECGSQFSVALT 4218
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4279 GDNDEGQLGDGTTNAIQRPRLVAAL 4303
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++SL I++ AA + + ++ G+V+++G G +G T + P+++
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG--DTVPLEEPKMI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+L VV A G+ ++A ++ EG +YT+ GN RLGH + + P + G L
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-L 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ ++ G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V+ G+ + + +DG+V +WG G LGHG EE PK+++ L K I V G
Sbjct: 661 --VKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +VYS+G +
Sbjct: 719 STHCLALTEDSEVYSWGSND 738
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D G PQLV+SL +
Sbjct: 449 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILG--------------PQLVQSLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V+ G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAV 3056
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K IHVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 3020 CGEATNGRLGLGL-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + A+ S +YS G G G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 3134
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3193 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E L ++ V Q A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDI-LGPQ----------LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+L + +V+IAA G+ Y LALA + V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ + G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ + AG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGEKVIDVVAGSTHCLALT 726
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y++G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYSWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + + VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--IHVAVGALHCLAVTDTGQVYA 3284
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVSCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + V AG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GEKVIDVVAGSTHCLALTEDSEVYSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ + G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
VY SWG++ + H +P P L L++ +V IA G
Sbjct: 731 VY--SWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACG 770
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+II A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+L++ N+ + + H + G V +WG G G LGHG+ PK++ A
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 11/296 (3%)
Query: 51 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + S+ VYS+G G+LGHG + + + P PI++L GIRI Q A G +
Sbjct: 75 GADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + + + +A G+ + ++++ SG A+Y+
Sbjct: 193 LYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKMSMVACGWRHTISVSY--SG-ALYTY 248
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E L + +G W H + DG++ WGW ++
Sbjct: 249 GWSKYGQLGHGDLEDHLVPHKLE---ALGNSVISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G GN + P V+ +D K + V+ G T V+E +V+++G G + LG
Sbjct: 306 GQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHKLE-ALGNSVISQISGGWRHTMALT---SDGKL 297
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G+ D+ P Q ++ + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESLDRNFPKIIEALS 378
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E VP ++AL + ++ G T ++ DG +Y +G + +G
Sbjct: 254 GQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R++ +AGA ++ + V ++G+ G+ +G +L SP + +L + +V
Sbjct: 16 RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDDHQIVSVT 73
Query: 156 IGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
G T S E R VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSH 131
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A
Sbjct: 132 CLAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAA 186
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V +DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALY 246
Query: 334 SFGCGESASLGHNAIAD 350
++G + LGH + D
Sbjct: 247 TYGWSKYGQLGHGDLED 263
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L + Q V
Sbjct: 17 VLIISAGASHSVALL---SGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSA--LDDHQIVS 71
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA H + V +WGWG +G LGHGN P ++AL+ ++ +A GD
Sbjct: 72 VTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 131
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 132 CLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV 162
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++A+TS G +Y +G N GQ+G G ++ P +R +++Q + G
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWR 338
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 339 HTLAVTERNNVFAWGRGTNG--QLGIGESLDRNFPKIIEAL 377
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G H +AVT+ G VYS+G N +GQLG G T++ P + + +G+ + AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A T ++D+G++Y +G +G G +G +++ P V ++ + + A G T
Sbjct: 171 AEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+S+ G++YT+ W +LGH + + PH + L + Q++ G+ + +AL
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y G G++G G D P+LI Q Q + V V+ G H V V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
+WG G G LGHG+ S PK +QAL+
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S VV SFG GQLGHG E+ PR I +L I A GA T
Sbjct: 12 AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTA 71
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +Y++G FG +G V P +++L+ + + Q A G+ ++ +G
Sbjct: 72 YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY++ + +LG + + PH LL E + V +AAG + A+ SG +Y
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT--DSGK-LYG 185
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P E + + + +VA G H V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ +P V AL + V+ G T ++E G +Y +G + +G +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303
Query: 349 AD 350
D
Sbjct: 304 DD 305
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 19/328 (5%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRP 86
+L+ R + A C E S G H+ A + ++ +YS+G G+LGHG + + + P
Sbjct: 45 RLLPRIIGALNDC---EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVP 101
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
PI++LQG+ I Q A G + ++ G+VY++G++ G+ G LV P + +
Sbjct: 102 HPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAF 159
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPV 204
+ + V A G TA ++ G++Y + WG LG + + P P +G + +
Sbjct: 160 EGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKM 216
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+A G+ + +A++ SG +Y+ G G+LGHG D P + N+ V
Sbjct: 217 CMVACGWRHTIAVS--QSGK-LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV-- 271
Query: 265 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYT 322
+G W H + + G++ WGW ++G +G G+ + + P+++ + + V+ G
Sbjct: 272 -SGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRH 330
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V++ +VYS+G G S LGH D
Sbjct: 331 TVAVTDKNNVYSWGRGTSGQLGHGDAVD 358
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA T+ + V +FG+ G+ +G +L+ P+++ +L + + A
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLL--PRIIGALNDCEISLVA 63
Query: 156 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G + TA + +Y++ WG+ RLGH + PHP+ L+ + + QIA G +
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ VYS G G+LG G D P + F+ ++++ ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G++ WGWGRYG LG G+ +P V A+ D K VA G T VS+ G +Y+
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237
Query: 335 FGCGESASLGHNAIAD----GQVCSLLFLSIFQYLQIW 368
+G + LGH AD QV +L +I Q W
Sbjct: 238 YGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGW 275
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 18/289 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ + + + + + P L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + V+ ++G GQLGHG E+ P I I GA T
Sbjct: 21 AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80
Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S D QVY++G FG +G + V +PQ V++L+ I + Q A G+ ++ G
Sbjct: 81 YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ E VP V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312
Query: 349 AD 350
AD
Sbjct: 313 AD 314
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 11/276 (3%)
Query: 46 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQGI+I Q A G
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGD 128
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG+V ++G++ G+ G L+ PQ +++ + I V A G TA +
Sbjct: 129 SHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQAFEGISVKMIAAGAEHTAAV 186
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + P + ++E +V +A G+ + + ++ S
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKV-SSVEGDKMVLVACGWRHTITVSSSGS-- 243
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 244 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 299
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
GW ++G +G G+ P V + K VA G
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACG 335
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + +G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ V S G G+LG G+ D P+ I+ F+ ++++ ++AAGA H A V
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ VP+ V ++ K + VA G T VS G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 248 GWSKYGQLGHGDFED 262
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +GI + AAGA
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + + V P+ V S++ +V A G T +S
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH + L++ QI+ G+ + +AL S +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
Y G G++G G D P Q Q V A W
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGW 336
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 25/288 (8%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
HS AVT G +Y++G +++ G LGHG W P+ + L+G+R+ A G T+L+
Sbjct: 186 HSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLV 245
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSR 166
+ GQ+++FG +FG +G + K + P+ VESLK + ++AA G + TA V+SR
Sbjct: 246 TSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSR 303
Query: 167 --------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G+ RLGH + + P + L + Q+A G+ +AL
Sbjct: 304 YSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTVALT 362
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ +Y++G G+LG T RL +L V+ GA+H A + G
Sbjct: 363 ---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALTSKG 415
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
VCTWG G G LGHG+ E VP +V+AL D + V+ G T +
Sbjct: 416 DVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR +RSL + + Q A G L++ G+V+++G++S G +GV V PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + V A G + + +++ G +YT+ G N LGH + P + G LE +
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVR 231
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + + + S ++S G G G LGHG R PR +E L L+ +
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G LGHG++E + VP V AL D
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
VA G T ++ G +Y+ G LG + A G++ +L L
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMGSVSYGQLG-DPQATGRLPGVLRL 393
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H++ VTS G ++SFG + G LGHG + PR + SL+G++ ++AA G
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292
Query: 106 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + S +G+++ +G +G + KLV P V +L + Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ T L+ G +YT + +LG +P P + L + +++ G +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+ AL S V + G G G+LGHG D P L+E + ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
KL RTD PR + +L++Q +A G HAA+V + G V +WG G LGHG
Sbjct: 102 KLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHAALVTRQGEVFSWGEESGGRLGHGV 159
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ + P+++ +L +VA G+Y + V++ GD+Y++G G
Sbjct: 160 DADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDG 202
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 160/306 (52%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP+ I LQ IIQ + G+
Sbjct: 44 QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG T+ +P ++ + L ++ A G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FAACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 18/289 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E PR I + Q + G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ + + + + + PQL+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH TE V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L + A GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFAACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A V G+V
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSRGKVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + AA G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A +
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLAFVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G+VY F G+ +LG + + + P ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q++ G+ + L L + VY+ G +LGH T K P+LI + Q + +
Sbjct: 42 VQQVSCGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPQLIPELQ--DYVIIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYT 322
++ G+ H+ + G+V +WG G LGH E E +PKVV+ L + +A G+
Sbjct: 95 ISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVTVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G G+ G+ GT+ T P+ ++SL +I +VQ A G F + LS+
Sbjct: 100 NDKGQVYAWGFAVDGQL--GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E ++ +L IP QIAAG + L SG AV+
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL--SG-AVF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 64 GQLGH----EKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS 119
Query: 185 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
TE P + +L +I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYTRVPRNI-KSLSDIQIVQVACGYFHSLALS---KGSEVFSWGQNKYGQLGLGYEY 175
Query: 244 DEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P++I+ LL + +AAG H+ V+ G V WG ++G LG +E VP
Sbjct: 176 KKQASPQIIKS--LLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVP 233
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K ++++ G+ T ++++G V++FG G LGHN+ A
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGTTSNRKSP 338
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E +G L+ +V ++ G + LAL + VY+ G + G+LG
Sbjct: 64 GQLGHEKSRKRPEQ---VGALDAQNIVTVSCGEAHTLALNDKGQ---VYAWGFAVDGQLG 117
Query: 239 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
G+ + PR I+ L ++Q V VA G +H+ + + V +WG +YG LG G E
Sbjct: 118 LSGTEEYTRVPRNIKS--LSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEY 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ ++ P+++++L + +A G +FV++ G V+ +G + LG N D V +L
Sbjct: 176 KKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG T N P P+ G
Sbjct: 311 PSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKGN 344
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ ++D
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDK 102
Query: 114 GQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+ V+
Sbjct: 103 GQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ +LG + L+ +L IP +Q+AAG + L SG A++ G
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIFGWGRN 217
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG D P L++ + + V + G H A + ++G V T+G G YG LG
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 293 HGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
H + E P+ V L +A G +T+ V G +YSFG G + LG + ++
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 9/302 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S VV SFG GQLGHG E+ PR I +L I A GA T
Sbjct: 12 AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTA 71
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +Y++G FG +G V P +++L+ + + Q A G+ ++ +G
Sbjct: 72 YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY++ + +LG + + PH LL E + V +AAG + A+ G +Y
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT---DGGKLYG 185
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P E + + + +VA G H V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ +P V AL + V+ G T ++E G +Y +G + +G +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303
Query: 349 AD 350
D
Sbjct: 304 DD 305
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 13/269 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G H +AVT+ G VYS+G N +GQLG G T++ P + + +G+ + AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A T ++D G++Y +G +G G +G +++ P V ++ + + A G T
Sbjct: 171 AEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+S+ G++YT+ W +LGH + + PH + L + Q++ G+ + +AL
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y G G++G G D P+LI Q Q + V V+ G H V V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
+WG G G LGHG+ S PK +QAL+
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 44 ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E S G H+ A + ++ +YS+G G+LGHG + + + P PI++LQG+ I Q A
Sbjct: 58 EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIAC 117
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++ G+VY++G++ G+ G LV P + + + + V A G TA
Sbjct: 118 GDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAFEGVSVKMLAAGAEHTA 175
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQ 220
++ G++Y + WG LG + + P P +G + + +A G+ + +A++
Sbjct: 176 AVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKMCMVACGWRHTIAVS-- 230
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 279
SG +Y+ G G+LGHG D P + N+ V +G W H + + G+
Sbjct: 231 QSGK-LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV---SGGWRHTVALTEAGK 286
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WGW ++G +G G+ + + P+++ + + V+ G T V++ +VYS+G G
Sbjct: 287 LYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346
Query: 339 ESASLGHNAIAD 350
S LGH D
Sbjct: 347 TSGQLGHGDAVD 358
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ +AGA T+ + V +FG+ G+ +G + + P+++ +L + + A
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL--PRIIGALNDCEISLVA 63
Query: 156 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G + TA + +Y++ WG+ RLGH + PHP+ L+ + + QIA G +
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ VYS G G+LG G D P + F+ ++++ ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G++ WGWGRYG LG G+ +P V A+ D K VA G T VS+ G +Y+
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237
Query: 335 FGCGESASLGHNAIAD----GQVCSLLFLSIFQYLQIW 368
+G + LGH AD QV +L +I Q W
Sbjct: 238 YGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGW 275
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ G+ P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E P
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRV-KSLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 10/216 (4%)
Query: 42 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIR 96
++ N Q I G H +A+ + G +++G NS GQLG G + P+ ++SL GI
Sbjct: 132 KKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIP 191
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ Q AAG + +S +G V+ +GK+S G+ G+ + SP V+ L++ VV +
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDERDRESPCHVKLLRSQKVVYISC 249
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G TAVL++ G V+TF G+ +LGH + ++V P +L L V QIA G + LA
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLA 308
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
PS +Y+ GCG G+LG G + K P ++
Sbjct: 309 FV--PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + +G+K P+ + +L +V A G + LS +G+++++ G+D +LG
Sbjct: 64 GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLT 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
T + V L+ L ++Q++ G + LALA ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+ ++ + L V AAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ G+ P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E P
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S VV S+G GQLGHG T++ P + +L +I A GA T+
Sbjct: 20 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 80 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHGN E VP+ +QAL+D V+ G + ++ G +Y +G + +G
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVG 307
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 11/302 (3%)
Query: 51 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + S+ +YS+G G+LGHG + + P+PI +LQG+RI Q A G +
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 132
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + + + A G + ++ G
Sbjct: 133 VTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITENGE 190
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + ND + +++ +V +A G+ + ++++ S +Y+
Sbjct: 191 LYGWGWGRYGNLG-LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS---SLGGLYTY 246
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG+ D P ++ Q L+ + + +G W H+ + G + WGW ++
Sbjct: 247 GWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKF 303
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G +G G+ P V+ +D K + ++ G T V+E +V+S+G G + LGH
Sbjct: 304 GQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT 363
Query: 349 AD 350
D
Sbjct: 364 VD 365
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG GT+E+ P+ I++ QG+ I AAGA
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G++Y +G +G G + + + P+ V S+ +V A G T +S
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL S +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHG+ + PK+++AL+ G + S + D+ S G S S +
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS-------VDGSSGPHIESSNTDLLSGKSGASLSERY 405
Query: 346 NAIADGQV 353
+ D V
Sbjct: 406 AVVPDETV 413
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + + +
Sbjct: 15 VLLISAGASHTVALL---SGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSI- 70
Query: 264 VAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
A GA H + + +WGWG +G LGHGN +P+ + AL ++ +A GD
Sbjct: 71 -ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSH 129
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ +G+V S+G ++ LG D V
Sbjct: 130 CLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV 160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+A + SQ G HS+A+TS G++Y +G N GQ+G G + P ++ ++
Sbjct: 269 QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKV 328
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 329 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 18/289 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ + + + + + P L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 187
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHV---KLLRAQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTEE PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESPCHVKLLRAQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 288
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 289 GCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G+LG
Sbjct: 64 GQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDGQLG 117
Query: 239 H-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
GS + PR I+ L ++Q V VA G +H+ + + V WG +YG LG G +
Sbjct: 118 LLGSEECIRVPRNIKS--LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ ++ PK++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 KKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G+LG
Sbjct: 64 GQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDGQLG 117
Query: 239 H-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
GS + PR I+ L ++Q V VA G +H+ + + V WG +YG LG G +
Sbjct: 118 LLGSEECIRVPRNIKS--LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ ++ PK++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 KKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L G+ II GA T
Sbjct: 25 AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTS 84
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ +VY++G FG +G + L T PQ +++L ++ + Q A G+ ++ +G
Sbjct: 85 YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PQPIKALHSLKIRQIACGDSHCLAVTMDG 142
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + + + + +AAG + A+ +Y
Sbjct: 143 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVSIKMVAAGAEHTAAVTEDGE---LYG 198
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 287
G G G LG G R D P E+ L+N +++ A W H V G + T+GW +
Sbjct: 199 WGWGRYGNLGLGDRNDRLVP---EKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSK 255
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LGHG+ E P V+AL D ++ G T ++ DG++Y +G + +G
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVG 312
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEH 186
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G++Y +G +G G + +LV P+ V + ++ A G T +S
Sbjct: 187 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSS 244
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + PH + L + + I+ G+ + +AL + +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSDGN---L 300
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y G G++G G D P ++ V ++ G H + + V +WG G
Sbjct: 301 YGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRG 360
Query: 287 RYGCLGHGNEECESVPKVVQALN 309
G LGHG ++PK+++ L+
Sbjct: 361 TNGQLGHGESMDRNLPKIIEVLS 383
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 16/265 (6%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
PIR ++I +AGA ++ + V ++G+ G+ +G + +P + +L
Sbjct: 16 PIR-----QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR--PTPTQLSTLD 68
Query: 148 NIFVVQAAIGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
+ ++ G T S E R VY++ WG+ RLGH + P P+ L ++ +
Sbjct: 69 GLDIISITCGADHTTSYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHSLKIR 126
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
QIA G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VA
Sbjct: 127 QIACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIK--MVA 181
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
AGA H A V +DG + WGWGRYG LG G+ VP+ V +N K I VA G T
Sbjct: 182 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTIS 241
Query: 326 VSEDGDVYSFGCGESASLGHNAIAD 350
VS G +Y++G + LGH D
Sbjct: 242 VSSSGGLYTYGWSKYGQLGHGDFED 266
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 151/311 (48%), Gaps = 13/311 (4%)
Query: 51 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+ + + S+ VYS+G G+LGHG + + + P+PI++L ++I Q A G +
Sbjct: 78 GADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLA 137
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + + + A G TA ++ +G
Sbjct: 138 VTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQAFQGVSIKMVAAGAEHTAAVTEDGE 195
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + + ++ +A G+ + ++++ S +Y+
Sbjct: 196 LYGWGWGRYGNLGLGDRNDRLVPEKV-SLVNGDKMIMVACGWRHTISVS---SSGGLYTY 251
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG D P +E L + + +G W H + DG + WGW ++
Sbjct: 252 GWSKYGQLGHGDFEDHLTPHKVEA---LRDSYISMISGGWRHTMALTSDGNLYGWGWNKF 308
Query: 289 GCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G +G G+ + C V + ++ G T ++E +V+S+G G + LGH
Sbjct: 309 GQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHG 368
Query: 347 AIADGQVCSLL 357
D + ++
Sbjct: 369 ESMDRNLPKII 379
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL SG V S G G G+LGHG D P + L++ +
Sbjct: 20 VILISAGASHSVALL---SGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDI--IS 74
Query: 264 VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ GA H + V +WGWG +G LGHGN P+ ++AL+ +K +A GD
Sbjct: 75 ITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSH 134
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ DG+V S+G ++ LG D V
Sbjct: 135 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV 165
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+ AG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVTAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ ++G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKNGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVTAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG E + P H L L VV I+ G + L V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT---KNGGVFT 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L V AG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--TAGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V++++G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 157/301 (52%), Gaps = 11/301 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E QA +G HS+ + S G V+S G NS GQLG + E +P+PI++L+ +R+ + G
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCG 94
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + G+V+A+G S G+ G + ++ PQ +++L I ++Q + GN+ +
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153
Query: 164 LSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS +G+V FSWG+++ +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 154 LSEDGQV--FSWGSNSHGQLGLGKELPSQASPQ-RVRSLDGIPLAQVAAGGAHSFALSLS 210
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ S G G PR + + L + V ++ G H AV+ Q+G+V
Sbjct: 211 GTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGV--VYISCGHEHTAVLTQNGKV 268
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 339
T+G G LGH ++ P++++ + + + + G Y T V G V SFG G
Sbjct: 269 FTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRGP 327
Query: 340 S 340
S
Sbjct: 328 S 328
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 15/263 (5%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G + QAA+G ++L+ G V++ G +S G+ G +G + P+ +++L+ + V
Sbjct: 33 GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVEL 90
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+ G + + +GRV+ + G++ +LG E N + + TL I ++Q++ G
Sbjct: 91 VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQK--IKTLTGIKIIQVSCGN 148
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ LAL+ V+S G G+LG G + P+ + + L VAAG H
Sbjct: 149 YHSLALS---EDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPL--AQVAAGGAH 203
Query: 271 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESV-PKVVQALNDVKAIHVATGDYTTFVVS 327
+ + G WG G L N +S P+ V AL + ++++ G T V++
Sbjct: 204 SFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLT 263
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
++G V++FG LGH+ A+
Sbjct: 264 QNGKVFTFGDNSCGQLGHSPTAE 286
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 18/330 (5%)
Query: 38 EACCRRENSQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
E+ +E + A P H +A+TS+G VYS+G+ G+LGHG T ++ + + +
Sbjct: 184 ESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKV-----L 238
Query: 96 RIIQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----F 150
I+ G+ M ++ G+VY++G G +G ++ P LV L
Sbjct: 239 VIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEPTLVRGLSGKQLGRH 296
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VV G+ ++A ++ +G ++T+ GN RLGH + + + P L+ +L+ V+ I G
Sbjct: 297 VVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTP-TLVVSLKGRRVIDICCG 355
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
LA G V+S G G GKLG G K P++I++ Q ++ V V GA
Sbjct: 356 SGDAQTLAVTDDG-TVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDI--VRVCCGAQF 412
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ + + G + TWG G LGHG EE PK ++ L K + VA G V++E+G
Sbjct: 413 SLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEG 472
Query: 331 DVYSFGCGESASLGHNAIADGQVCSLLFLS 360
+VY +G + LG ++ + +L+ L
Sbjct: 473 EVYGWGRNDQGQLGDSSFSTKSDPTLMPLD 502
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 46/330 (13%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
G +L+ LL C QA+ G G + V G + G+NS GH
Sbjct: 91 GELRLIFTCLLYASRC----QEQAMPGTGSTQEVLGWGWLAWTGANSPNSSGH------- 139
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQL 142
L + ++Q A + ++ G+VY + +S G PQL
Sbjct: 140 ---TCEMLGELGVLQLACAERCLIALTKTGRVYMCFYSSESQG--------------PQL 182
Query: 143 VESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ESL + V++ A G + A L+ EG VY++ G+ RLGH + +L
Sbjct: 183 MESLADKEVLKVAAHPEGKHYMA-LTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVL--- 238
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLL 257
+ V + +AL + VYS G G GG+LGHG + P L+ + L
Sbjct: 239 --VIVYPYHPEGKHYMALTSEGE---VYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL 293
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV- 316
V + G+ ++A + DG + TWG G YG LGHG+ E + P +V +L + I +
Sbjct: 294 GRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDIC 353
Query: 317 -ATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+GD T V++DG V+S+G G+ LG
Sbjct: 354 CGSGDAQTLAVTDDGTVWSWGDGDYGKLGR 383
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 126/297 (42%), Gaps = 28/297 (9%)
Query: 56 IAVTSKGVVYS--FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLIS 111
IA+T G VY + S S G P+ + SL +++ AA M ++
Sbjct: 160 IALTKTGRVYMCFYSSESQG------------PQLMESLADKEVLKVAAHPEGKHYMALT 207
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+VY++G G +G LV I G + A L+ EG VY
Sbjct: 208 SEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV-----IVYPYHPEGKHYMA-LTSEGEVY 261
Query: 172 TFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++ G+ RLGH + EP L G VV I G Y A+ +++
Sbjct: 262 SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGE---LFT 318
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G+LGHGS D+ P L+ + + + +G V DG V +WG G Y
Sbjct: 319 WGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDY 378
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G + PK++ L + V G + +++ G ++++G G+S LGH
Sbjct: 379 GKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGH 435
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+S E L + V+Q A L++ GRVY + +++ + L+
Sbjct: 136 SSGHTCEMLGELGVLQLACAERCLIALTKTGRVYMCFYSSES-----------QGPQLME 184
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
+L + V+++AA +A G VYS G G GG+LGHG
Sbjct: 185 SLADKEVLKVAAHPEGKHYMALTSEG-EVYSWGNGDGGRLGHGDTN-----------VCY 232
Query: 258 NLQPVVVAAGAWHAA-----VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
Q V+V +H + +G V +WG G G LGHG+ P +V+ L+ +
Sbjct: 233 KGQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQ 292
Query: 313 ----AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
+H+ G + ++ DG+++++G G LGH + D Q+ L +S+
Sbjct: 293 LGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSED-QLTPTLVVSL 344
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S VV S+G GQLGHG T++ P + +L +I A GA T+
Sbjct: 20 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 80 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHGN E VP+ +QAL+D V+ G + ++ G +Y +G + +G
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVG 307
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 11/302 (3%)
Query: 51 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + S+ +YS+G G+LGHG + + P+PI +LQG+RI Q A G +
Sbjct: 73 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 132
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + + + A G + ++ G
Sbjct: 133 VTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITENGE 190
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + ND + +++ +V +A G+ + ++++ S +Y+
Sbjct: 191 LYGWGWGRYGNLGL-GDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS---SLGGLYTY 246
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG+ D P ++ Q L+ + + +G W H+ + G + WGW ++
Sbjct: 247 GWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKF 303
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G +G G+ P V+ +D K + ++ G T V+E +V+S+G G + LGH
Sbjct: 304 GQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT 363
Query: 349 AD 350
D
Sbjct: 364 VD 365
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG GT+E+ P+ I++ QG+ I AAGA
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G++Y +G +G G + + + P+ V S+ +V A G T +S
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL S +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 286 GRYGCLGHGNEECESVPKVVQALN 309
G G LGHG+ + PK+++AL+
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 9/259 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R++ +AGA T+ + V ++G+ G+ +G +L+ P + +L + A
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71
Query: 156 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S +Y++ WG+ RLGH + + P P++ L+ + + QIA G +
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +VAAGA H+ +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G + WGWGRYG LG G+ +P+ V +++ K + VA G T VS G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 335 FGCGESASLGHNAIADGQV 353
+G + LGH D V
Sbjct: 246 YGWSKYGQLGHGNFEDSLV 264
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+A + SQ G HS+A+TS G++Y +G N GQ+G G + P ++ ++
Sbjct: 269 QALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKV 328
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 329 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 153/302 (50%), Gaps = 11/302 (3%)
Query: 51 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + S+ +YS+G G+LGHG + + P+PI +LQG+RI Q A G +
Sbjct: 74 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 133
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ K + + A G + ++ G
Sbjct: 134 VTMEGEVQSWGRNQNGQLGLGNTEDSLV--PQKIQAFKGVPIKMVAAGAEHSVAITENGE 191
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + P + +++ +V +A G+ + ++++ S +Y+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRWNPEK-VSSVDCDKMVMVACGWRHTISVS---SSGGIYTY 247
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 288
G G+LGHG+ D P ++ Q L+ + + +G W H+ + G + WGW ++
Sbjct: 248 GWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKF 304
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G +G G+ P V+ D + + ++ G T V+E +V+S+G G + LGH
Sbjct: 305 GQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT 364
Query: 349 AD 350
D
Sbjct: 365 ID 366
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S VV S+G GQLGHG T++ P + +L I A GA T+
Sbjct: 21 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLA 80
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 81 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 138
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG + + P + + +P+ +AAG + +A+ +Y
Sbjct: 139 EVQSWGRNQNGQLGLGNTEDSLVPQKIQ-AFKGVPIKMVAAGAEHSVAIT---ENGELYG 194
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D +P + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRWNPEKVSSVDCDKM--VMVACGWRHTISVSSSGGIYTYGWSKY 252
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHGN E VP+ +QAL+D V+ G + ++ G ++ +G + +G
Sbjct: 253 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVG 308
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +G+ I AAGA
Sbjct: 123 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEH 182
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G++Y +G +G G + + +P+ V S+ +V A G T +S
Sbjct: 183 SVAITENGELYGWGWGRYGNLGLGDRNDRW--NPEKVSSVDCDKMVMVACGWRHTISVSS 240
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL +G+ +
Sbjct: 241 SGGIYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALTS--TGL-L 296
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
+ G G++G G D P Q + Q VV + W H V + V +WG
Sbjct: 297 FGWGWNKFGQVGVGDNLDHCSPV---QVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGR 353
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHG+ + PK+++AL+ G + S + D+ S G S S +
Sbjct: 354 GTNGQLGHGDTIDRNSPKIIEALS-------VDGSAGPHIESSNTDLLSGKSGVSLSERY 406
Query: 346 NAIADGQV 353
+ D V
Sbjct: 407 AVVPDETV 414
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 9/259 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R++ +AGA T+ + V ++G+ G+ +G + + P + +L + A
Sbjct: 15 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSIA 72
Query: 156 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T S +Y++ WG+ RLGH + + P P++ L+ + + QIA G +
Sbjct: 73 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 131
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA+ + V S G G+LG G+ D P+ I+ F+ + ++ +VAAGA H+ +
Sbjct: 132 LAVTMEGE---VQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIK--MVAAGAEHSVAI 186
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G + WGWGRYG LG G+ P+ V +++ K + VA G T VS G +Y+
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 335 FGCGESASLGHNAIADGQV 353
+G + LGH D V
Sbjct: 247 YGWSKYGQLGHGNFEDSLV 265
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+A + SQ G HS+A+TS G+++ +G N GQ+G G + P ++ Q R+
Sbjct: 270 QALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRV 329
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q + G T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 330 VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG--DTIDRNSPKIIEAL 376
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 158/295 (53%), Gaps = 21/295 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ AVT+ G +Y++G ++++G LGHG+ W P+ + L G+ +
Sbjct: 316 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAV 375
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ +GQ+Y FG +FG +G + + + P+ VESLK + + + G +
Sbjct: 376 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 433
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
TA + + G+++T+ G+ RLGH + ++P + +L + + A G+
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAACGH 492
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L SG +++VG + G+LG+ + D ++PRL+E+ QL V VA G++H
Sbjct: 493 TLTIGLTT--SGH-IFTVGSPVYGQLGNPN-NDGRYPRLVEE-QLGGGGVVEVACGSYHV 547
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
AV+ G V TWG G G LGHG+ VP +V+AL D VA G T +
Sbjct: 548 AVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAI 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 144/343 (41%), Gaps = 70/343 (20%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GTT + P+P+ S + + A G L++ +V+ +G++ G +G+ GT V
Sbjct: 246 GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGI-GTN-V 303
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPL 195
P+LVESL V A G F T ++ G +YT+ G N LGH + + P +
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV 363
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G L+ +PV ++ G + + S +Y+ G G G LGHG+R +P+ +E
Sbjct: 364 SGPLDGLPVSAVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE--S 418
Query: 256 LLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
L L+ + V+ G WH A V G++ TWG G LGHG+ + P V
Sbjct: 419 LKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVP 478
Query: 307 ALNDVK----------------------------------------------------AI 314
+L D +
Sbjct: 479 SLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVV 538
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G Y V++ G+VY++G G + LGH IAD +V +L+
Sbjct: 539 EVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLV 581
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 186
Y T V P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 243 YSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGIG 300
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
N +P L+ +L V IA G + A+ + + G G LGHGS
Sbjct: 301 TNVFQPR-LVESLSTCNVELIACGEFHTCAVTAT-GDLYTWGDGTHNAGLLGHGSNVSHW 358
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+ + L L V+ G WH A++ G++ T+G G +G LGHGN S PK V+
Sbjct: 359 IPKRVSG-PLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVE 417
Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGH 345
+L ++ I V+ G + T V E G ++++G G+ LGH
Sbjct: 418 SLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGH 465
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRV-KSLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 10/212 (4%)
Query: 42 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIR 96
++ N Q I G H +A+ + G +++G NS GQLG G + P+ ++SL GI
Sbjct: 132 KKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIP 191
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ Q AAG + +S +G V+ +GK+S G+ G+ + SP V+ L++ VV +
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDERDRESPCHVKLLRSQKVVYISC 249
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G TAVL++ G V+TF G+ +LGH + ++V P +L L V QIA G + LA
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLA 308
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
PS +Y+ GCG G+LG G + K P
Sbjct: 309 FV--PSSGMIYAFGCGTRGQLGTGHTCNVKCP 338
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 12/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + +G+K P+ + +L +V A G + LS +G+++++ G+D +LG
Sbjct: 64 GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLT 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
T + V L+ L ++Q++ G + LALA + ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA---ADGQFFTWGQNSYGQLGLGKECP 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+ ++ + L VAAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPL--AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 156/306 (50%), Gaps = 19/306 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVY++G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDSDGQ--LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMA 225
V F WG + +LG + L+ +L IP +Q+AAG + ++L L SG A
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG D P L++ L + + V + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Query: 345 HNAIAD 350
+ ++
Sbjct: 329 TGSTSN 334
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G+ K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
VA G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQ--LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 28/312 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
S +AG +S+A+ + G ++++G N G LGH T+ E P P+ +L G+ I+QAA G
Sbjct: 47 SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
+ + D G+ YA+G + +G EAE GT+ + P + V Q A G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGG 166
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 214
+ VL+++G V+T+ G P D++ P + G LEN+ V+ + A
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA G+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G V WG G +G LG G+++ VP+ V+ L I V+ G + ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330
Query: 334 SFGCGESASLGH 345
S+G G+ LG+
Sbjct: 331 SYGRGDHGRLGY 342
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+T G+++++G+N GQLG G T+ +P + L + ++ AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++ G+VYA+G+ G +G + + PQ VE L ++Q + G +
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR++++ G+ RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
AV + G G G+LG G +E R + L + VV AG+ ++ + DGR+ TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69
Query: 285 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
W + G LGH E + ES P V AL V + A G + V + G Y++G E
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 344 GHNA 347
G A
Sbjct: 130 GEEA 133
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 34 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 82
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 83 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 163/321 (50%), Gaps = 24/321 (7%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
R + G HSI + G VY+ G N+ GQLGH +E +P I +L II A
Sbjct: 92 ERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGALADQHIIHVA 149
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFF 160
G ++ +SD G+++++G S G + G+ T+ V P+L++ L ++Q + GN+
Sbjct: 150 CGESHSLALSDQGRLFSWGAGSDG--QLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWH 207
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
L+ +G+ F+WG ++ +LG E P+ P + +L+ IP+ Q+AAG + AL
Sbjct: 208 CLALAADGQF--FAWGQNSHGQLGLGKEFPSQASPQ-RVKSLDGIPLAQVAAGGAHSFAL 264
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
+ SG AV+ G G+LG D + P + +LL Q VV ++ G+ H AV+ +
Sbjct: 265 SL--SG-AVFGWGKNTSGQLGLSDEQDRESPCHV---KLLRTQKVVYISCGSDHTAVLTK 318
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 335
G V T+G G G LGH + E P+ V L + +A G +T V G +Y+F
Sbjct: 319 TGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378
Query: 336 GCGESASLGHNAIADGQVCSL 356
GCG LG G C+L
Sbjct: 379 GCGIKGQLG-----SGHTCNL 394
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 137/295 (46%), Gaps = 28/295 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 151 GESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLA 210
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ +A+G++S G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 269
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG E D E + L VV I+ G + L V+
Sbjct: 270 V--FGWGKNTSGQLGLSDE-QDRESPCHVKLLRTQKVVYISCGSDHTAVLT---KTGGVF 323
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381
Query: 287 RYGCLGHG---NEEC------------ESVPKVVQALNDVKAIHVATGDYTTFVV 326
G LG G N +C E V + A H+ +G TFV+
Sbjct: 382 IKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVL 436
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 10/267 (3%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR + + + A G ++ + + G+VY G ++ G+ + +G+K P+ +
Sbjct: 83 EPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK----PEQIG 138
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L + ++ A G + LS +GR++++ G+D +LG T + V L+ L +
Sbjct: 139 ALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI 198
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV 263
+Q++ G + LALA + ++ G G+LG G + P+ ++ + L
Sbjct: 199 LQVSCGNWHCLALA---ADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPL--AQ 253
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G T
Sbjct: 254 VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHT 313
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
V+++ G V++FG G LGH++ D
Sbjct: 314 AVLTKTGGVFTFGAGSCGQLGHDSFND 340
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G +G GT P ++E + F V + A G + L +G VYT
Sbjct: 63 WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E + E +G L + ++ +A G + LAL+ Q ++S G G G+LG
Sbjct: 123 GQLGHEKEGSKPEQ---IGALADQHIIHVACGESHSLALSDQGR---LFSWGAGSDGQLG 176
Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
+ D PRLI++ LN + ++ V+ G WH + DG+ WG +G LG G E
Sbjct: 177 LTTTEDSVAVPRLIKK---LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233
Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ P+ V++L+ + VA G +F +S G V+ +G S LG
Sbjct: 234 FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLG 282
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N+SGQLG ++ P ++ L+ +++ + G+
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSD 311
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ G V+ FG S G + G +P+ V L V Q A G T A +
Sbjct: 312 HTAVLTKTGGVFTFGAGSCG--QLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFV 369
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 370 PSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKG 402
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVY++G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G+ K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
VA G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVY++G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN-----------SSGQLGHGTTEEEWR 85
G R++ Q +A +I S G ++ N S GQLG +EE R
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR 126
Query: 86 -PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G+ K TSPQL++
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIK 185
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 186 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 242
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 243 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 297
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
VA G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 298 QVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG S+ + S +G +Y+ G ++G+LG G + PRPI L I+ + +G
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2991
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + + P+++E+L++ + A G+ +A ++
Sbjct: 2992 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 3049
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ +L +VQ+A G LA G
Sbjct: 3050 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 3107
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ L + V + GA + + + G V TWG
Sbjct: 3108 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 3165
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHG+++ P V+++L D K IHVA G V++ G VY++G + G+
Sbjct: 3166 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3225
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 8/260 (3%)
Query: 86 PRPIRSLQGIRIIQAAA-GAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ + L GI +I+ AA G+ L ++ +VY++G G +G TK P L+
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLI 561
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
++LK ++ G ++A +S G +YT+ GN RLGH T + + P ++ L +
Sbjct: 562 QALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP-TMISALSDEH 620
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
++++A G Y L C S VYS G G GKLG G K PRLIE+ Q N++ V
Sbjct: 621 IIKVACGSFYAHTL-CITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQ--NVKIVQ 677
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V GA + + +DG V TWG G LGH EE P++V+ L D K + V+ G
Sbjct: 678 VYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHV 737
Query: 324 FVVSEDGDVYSFGCGESASL 343
+++ G+VY +G E+ +
Sbjct: 738 LALTDQGEVYGWGKNENKQI 757
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G+VYA G
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G + LV P L+ES++++F+ + A+ G LS + VY++ G+D
Sbjct: 3930 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3987
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH E L+ L+ ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 3988 KLGHGNRLA-CETPKLIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 4043
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+LIE+ + V +G + D V +WG G YG LG G +
Sbjct: 4044 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4103
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VPK +++L + I V G + ++ G VY++G G+ LGH
Sbjct: 4104 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4149
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG T + P I++L+G II G + IS
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 171
G +Y +G+ ++G +G L +P ++ +L + +++ A G+F+ T ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LG P L+ L+N+ +VQ+ G + +AL+ VY+ G
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G KLGH + + + P ++E + + + V V+ G H + G V WG +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVEVLR--DRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+E P++++AL K + V G +F ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q + G AVT+ G VY+ G + G+LG G T+ P + S+Q + I
Sbjct: 3898 EALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFI 3957
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S VY++G+ G+ +G + +P+L+E+L+ ++ A
Sbjct: 3958 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLIEALQGYEIIDIA 4015
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G++YT+ G RLGH + ++P L+ L V+ +A G
Sbjct: 4016 CGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQ 4074
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P+ IE L L + V G+ + +
Sbjct: 4075 TL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALT 4131
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG E PK V AL K I +ATG S++G+V+++
Sbjct: 4132 RSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTW 4191
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ S L
Sbjct: 4192 GDNDEGQLGDDTTNAIQRPRLVSAL 4216
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I +L+ +I A G+ +
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ +G++Y +G +G +G T+L P+L++SL +VQ A G+ L+
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGDNITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDE 3105
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ FSWG+ +LG PH + L + VVQI G + LAL V+
Sbjct: 3106 GWVFSWGDGDFGKLGRGGSEGCNIPHNI-ERLNALEVVQIECGAQFSLALT---KTGEVW 3161
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P +IE + + + + VA GA H V G+V WG
Sbjct: 3162 TWGKGDYFRLGHGSDQHVRKPTVIESLK--DKKVIHVAVGALHCLAVTDTGQVYAWGDND 3219
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L DV VA G
Sbjct: 3220 HGQQGNGTTIVNRKPALVHGLEDVHINRVACG 3251
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G +S A+++ G +Y++G + G+LGHGT E+ P I +L II+ A G+ T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
I+ G+VY++G +G+ G G+KL P+L+E L+N+ +VQ G F+ LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G +LGH TE N P ++ L + VV ++ G ++LAL Q VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G ++ S + PRLIE +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+++ VYS+G G+LGHG P+ I +LQG II A G +
Sbjct: 3964 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 4023
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ GQ+Y +GK +G +G +L P+L+E L V+ A G+ T ++ +
Sbjct: 4024 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 4081
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG +VY
Sbjct: 4082 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 4137
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+ + Q + + +A G+ H +G V TWG
Sbjct: 4138 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 4195
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
G LG P++V AL K +VA G T S +
Sbjct: 4196 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTNN 4238
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A+TS G +Y++G G+LGHG + +P+ I+SL G RI
Sbjct: 3028 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 3087
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ ++D G V+++G FG+ G G++ P +E L + VVQ
Sbjct: 3088 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 3145
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L++ G V+T+ G+ RLGH ++ + +P ++ +L++ V+ +A G + L
Sbjct: 3146 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 3204
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 274
A+ VY+ G G+ G+G+ + P L+ + +++ VA G+ H+ A
Sbjct: 3205 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 3259
Query: 275 GQDGRVCT 282
QD +V +
Sbjct: 3260 LQDTQVVS 3267
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P L + I A G+ ++S G++YA G+ +
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ + V P+ + L + + A+ G L+ +G+V+++ G D +L
Sbjct: 2956 NGR--LGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH N +P ++ L + + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3014 GHGNRLNLDKPK-MIEALRSKKIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGD 3069
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
+ P+LI+ L+ + V VA G+ A + +G V +WG G +G LG G E
Sbjct: 3070 NITQLKPKLIK--SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGC 3127
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++P ++ LN ++ + + G + +++ G+V+++G G+ LGH
Sbjct: 3128 NIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGH 3173
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 20/263 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ +L + I Q ++++ G+V+ S + PQ +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTG 509
Query: 146 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
L I +++ A G + A L+++ VY++ G+ RLGH EP L+ L+
Sbjct: 510 LSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
++ + G Y A++ + A+Y+ G G G+LGHG+ D P +I ++ V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ H + G+V +WG G YG LG G + +P++++ L +VK + V G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
+ +SEDG VY++G GE LGH
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGH 707
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
L+R +T SWG + H + +E P P L + VQ+ G
Sbjct: 3855 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3913
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
L A+ + VY+ G G GG+LG G P L+E Q + ++ + V +G H
Sbjct: 3914 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3970
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ D V +WG G G LGHGN PK+++AL + I +A G + ++ G +
Sbjct: 3971 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 4030
Query: 333 YSFGCGESASLGHNAIAD 350
Y++G G LGH D
Sbjct: 4031 YTWGKGRYGRLGHGDSED 4048
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A++ G VY++G +LGH T E P + L+ +++ + G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++D G+VY +GK+ E + ++L V P+L+E+LK VV
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCC--------- 784
Query: 166 REGRVYTFSWGND 178
G +F+W +D
Sbjct: 785 --GPAQSFAWTDD 795
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D + P+ + +N+ + H + +D V +WG G G LGHG+ + P
Sbjct: 499 SDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP 558
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++QAL I V G + +S +G +Y++G G LGH D
Sbjct: 559 TLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAED 606
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 22/309 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP---IRSLQGIRIIQAAAG 103
Q G H++ +T+ G VY+ GSN QLGH + R P I LQ IIQ G
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ ++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN +
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLA 162
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLA 216
L+ G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 163 LTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
SG AV+ G G+LG T+ +P ++ + L ++ VA G + +
Sbjct: 220 ----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTN 272
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
+G V T G G YG LGHG E +P++V L VA G+ +T +V G VY+F
Sbjct: 273 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 332
Query: 336 GCGESASLG 344
G G S LG
Sbjct: 333 GLGSSGQLG 341
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 15/290 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
+ + + + + + SP L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDC 124
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 181
Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
S D H + LL + +A G H+ ++ + G V +GWGR C LG +
Sbjct: 182 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 239
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 240 ETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 289
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 99 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 158
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV +T P + +L I + A G +
Sbjct: 159 HSLALTSCGELYSWGSNIYG--QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 216
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 217 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 274
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 275 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 330
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 331 AFGLGSSGQLGTRSTKSLMLPQVV 354
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 207 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 266
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 267 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 324
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 325 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 356
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K PR+ + LQ V
Sbjct: 42 VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPRMSPFLLIPELQDYV 96
Query: 264 V---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 319
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G
Sbjct: 97 IIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACG 156
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ + ++ G++YS+G LG N+ D C+
Sbjct: 157 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCN 192
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDS--LTGLGVVKVECGSQFSVALT 4215
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLVAAL 4300
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGS 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4235
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGSKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGTRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGD 3182
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 24/260 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLG 344
+++DG VYS+G G++ LG
Sbjct: 672 ALTKDGQVYSWGKGDNQRLG 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LG G EE PK+++ L K I VA G
Sbjct: 661 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLG TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGLGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGTRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LG G+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGLGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS--------SCS 781
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G +CS+ F
Sbjct: 782 E-WSIGLRVPFVVDICSMTF 800
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK G+ + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD--NQRLGLGTEEHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L++
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 35 LAGEACCR-------RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
L G+ C + ++ + + G + + + G V++ G + G+LG GT+++E
Sbjct: 304 LQGKTCLQPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLV 363
Query: 88 PIRSLQGIRIIQAAA---GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PI LQG IIQ A G G T+ ++D+G+V+++G +G+ +G ++ P+ +
Sbjct: 364 PITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHG--NSERQRKPKQII 421
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+L+ VVQA+ G +AVL+++G+V+TF G LG P +L +L+N +
Sbjct: 422 ALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLIL-SLKNEHI 480
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
QIA G + LALA +G +Y+ G G GKLG GS + P L++ ++ + L+ +
Sbjct: 481 SQIACGKDHTLALA--NNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKK--I 536
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G+ + V+ +G + T+G + + + ++P++V +L I +A G
Sbjct: 537 ACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYIL 596
Query: 325 VVSEDGDVYSFGCGESASLG 344
+ G+++ +G E LG
Sbjct: 597 ALDNSGNIWGWGTNEEGQLG 616
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 11/281 (3%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
C + + ++ G GH++AV G V+S+G G+LGHG +E + +P+ I +LQ ++QA
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQA 431
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G + +++ G+V+ FG+ +G G G +PQL+ SLKN + Q A G
Sbjct: 432 SCGFKHSAVLTKDGKVFTFGQGQYG--ILGDGGNSPQKTPQLILSLKNEHISQIACGKDH 489
Query: 161 TAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G ++Y + G +LG + P+ L+ + N+ + +IA G + + LA
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPN-LVDSYRNVCLKKIACGSKFSIVLA- 547
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
+ +Y+ G + D P+++ L P++ +A G + + G
Sbjct: 548 --TNGYLYTFGHKDFLGIAETDLLDNTIPQIVSS---LMPHPIIDIAVGCNYILALDNSG 602
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ WG G LG G +P++V + ++ G
Sbjct: 603 NIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAG 643
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 14/300 (4%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+++ VY +GSN G+L + +P + + + +R + G T L+ G V+
Sbjct: 284 ISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVR--EIVCGQNCTFLLQTNGSVF 341
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFS 174
A G+ ++G G + P + L+ ++Q A G+ T ++ G V+++
Sbjct: 342 ACGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWG 399
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G+ +LGH +P ++ L+ VVQ + G+ + L V++ G G
Sbjct: 400 DGDYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLT---KDGKVFTFGQGQY 455
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGH 293
G LG G + +K P+LI L N +A G H + +G+ + WG G +G LG
Sbjct: 456 GILGDGGNSPQKTPQLI--LSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ S+P +V + +V +A G + V++ +G +Y+FG + + + D +
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTI 573
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
Q II + IS VY +G + GE G+QG K P LV + K V
Sbjct: 267 QDNEIIDWFTNFPKDWEISAPITVYVWGSNIHGELP-GLQG-KTCLQPNLVSTFKQ--VR 322
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ G T +L G V+ G RLG T ++ H L +P+ ++ GYC
Sbjct: 323 EIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDE---HSL------VPITELQ-GYC 372
Query: 213 YLL----------ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+ LA SG V+S G G GKLGHG+ ++ P+ I Q ++ V
Sbjct: 373 IIQLATSLGGDGHTLAVADSG-EVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHV--V 429
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ G H+AV+ +DG+V T+G G+YG LG G + P+++ +L + +A G
Sbjct: 430 QASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDH 489
Query: 323 TFVVSEDG-DVYSFGCGESASLG 344
T ++ +G +Y++G GE LG
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLG 512
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3984 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFI 4043
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P++VESL+ I VV A
Sbjct: 4044 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVVESLRGIEVVDVA 4101
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDVACGSGDAQ 4160
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P IE L L V V G+ + +
Sbjct: 4161 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIES--LTGLGVVKVECGSQFSVALT 4217
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4218 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4277
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4278 GDNDEGQLGDGTTNAIQRPRLVAAL 4302
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4016 GA--GGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4074 KLGHGSRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4129
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4130 SDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP +++L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4190 KVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4237
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG+ RPR + SL+GI ++ AAG +
Sbjct: 4050 SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSAC 4109
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE L+ VV A G+ T L+ +
Sbjct: 4110 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEVLQGHRVVDVACGSGDAQTLCLTDD 4167
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4168 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IESLTGLGVVKVECGSQFSVALT--KSG-AVY 4223
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4224 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4282 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVFSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q +L+ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQ--DLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE P++++ L+ K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPR-LLEGLHGKKVIDVAAGSTHCLAL 725
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2996 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3055
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+L+ + A G+
Sbjct: 3056 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRAKRIRDIACGSS 3112
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3113 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3171
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3172 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3227
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3228 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3287
Query: 339 ESASLGH 345
+ G+
Sbjct: 3288 DHGQQGN 3294
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G V+++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D++ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 13/302 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S AV +K V+ +G N QLG + P +L + ++Q A G+
Sbjct: 2952 AGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3009
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +
Sbjct: 3010 VTVEGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3068
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+D +LGH + N +P L+ L + IA G + AL S +Y
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALRAKRIRDIACGSSHSAALT---SSGELY 3124
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGW 285
+ G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG
Sbjct: 3125 TWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G +G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242
Query: 346 NA 347
+
Sbjct: 3243 GS 3244
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAA 3116
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3117 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3174
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3175 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3226
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3227 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3283
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3320
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G V+S+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLEVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++PRL+E + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPRLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLHGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 96/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4007
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4008 GKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSW 4067
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHGSR+ PR++E + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4068 GEAEDGKLGHGSRSPCDRPRVVESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+ L + + VA +GD T +++D V+S+G G+ LG
Sbjct: 4126 RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4183
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3205 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3259
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3260 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3317
Query: 155 AIGN 158
A G+
Sbjct: 3318 ACGS 3321
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3268 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3325
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 32 RFLLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
R AG + RR A++ G GH AVT G+VY++G GQLGHG ++ P+P+
Sbjct: 261 RVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP 320
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-- 148
++G + +AG T+ ++ G ++ +G G+ + +L+ P LV +
Sbjct: 321 RIKG-EVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWG 377
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
+ V A G T VL+R G+V++F G+ RLGH + ND L LE+ V IA
Sbjct: 378 MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGND-NDQWSPTFLSALESERCVSIA 436
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
AG+ + +AL Q +Y+ GCG G+LGHGS +DE PR + ++ + VAAG
Sbjct: 437 AGFAHSVALTDQGQ---IYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGE 493
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGN 295
H + +G + T G +G + G+
Sbjct: 494 AHTCIFRSEGSLITLGRVSHGRMAEGS 520
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 17/280 (6%)
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
GAG ++D G VY +G+ +G+ +G K++ PQ V +K V + G + T
Sbjct: 281 GAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKII--PQPVPRIKG-EVKSVSAGFYHTV 337
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQP 221
++ G ++T+ G + +LGH+ + P + +E +PV AG + L L +
Sbjct: 338 AVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRG 397
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
V+S G G G+LGHG+ D+ P + + + + V +AAG H+ + G++
Sbjct: 398 Q---VFSFGSGDSGRLGHGNDNDQWSPTFLSALE--SERCVSIAAGFAHSVALTDQGQIY 452
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
TWG G+ G LGHG++ E +P+ + + + +KAI VA G+ T + +G + + G
Sbjct: 453 TWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG--- 509
Query: 340 SASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRHLPT 379
+ H +A+G C+ L + + + H P+
Sbjct: 510 --RVSHGRMAEGS-CAQDMLDTLHTAISRQSSNDWHHFPS 546
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ + + G A ++ G VYT+ G +LGH + + + P P+ V
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE--VK 327
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
++AG+ + +A+ A+++ G G GKLGH P L+ F +
Sbjct: 328 SVSAGFYHTVAVTHH---GALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQ 384
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
AG H V+ + G+V ++G G G LGHGN+ + P + AL + + +A G +
Sbjct: 385 AGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVA 444
Query: 326 VSEDGDVYSFGCGESASLGHNAIAD 350
+++ G +Y++GCG+ LGH + +D
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSD 469
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 21/288 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ A+T+ G +Y++G ++++G LGHG+ W P+ + L+G+++
Sbjct: 314 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 373
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 374 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 431
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 432 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 490
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L SG +++ G + G+LG+ + D ++PRL+E+ +L V VA GA+H
Sbjct: 491 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVACGAYHV 545
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
AV+ Q G V TWG G G LGHG+ P V+AL D +A G
Sbjct: 546 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 593
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 12/315 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT + V+++G SG+LGHG ++PR + SL + A G T I
Sbjct: 269 GVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAI 328
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGR 169
+ G +Y +G + G P+ V L+ + V + G + TA+++ G+
Sbjct: 329 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGK 388
Query: 170 VYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+YTF G LGH P +VE L T+ V A ++ S
Sbjct: 389 LYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSG 448
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCT 282
+++ G G +LGHG R+ + P + N V H +G G + T
Sbjct: 449 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCG----HTLTIGLTTSGHIFT 504
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G YG LG+ N + V + L + VA G Y V+++ G+VY++G G +
Sbjct: 505 AGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGR 564
Query: 343 LGHNAIADGQVCSLL 357
LGH IAD + + +
Sbjct: 565 LGHGDIADRKTPTFV 579
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 186
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 298
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ +P L+ +L V IA G + A+ + + G G LGHGS
Sbjct: 299 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 356
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+ + L LQ V+ G WH A++ G++ T+G G +G LGHGN E S PK V+
Sbjct: 357 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 415
Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGH 345
+L ++ I V+ G + T V E G ++++G G+ LGH
Sbjct: 416 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH 463
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT+ T P+ ++SL ++ +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG + L+ +L IP QIAAG + AL SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 14/284 (4%)
Query: 68 GSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
G+ S GQLG G +EE PR + G T+ + D G VY G + G
Sbjct: 5 GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 184
+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 65 QLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPG 120
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
TE P + +L ++ +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 121 TEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDLK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + +AAG H+ + G V WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
++++L K ++++ G+ T ++++G V++FG G LGHN+
Sbjct: 235 LLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS A+T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ + G ++ +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
GR+Y+F G + +LG + N P P+ G
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ +T +G VY+ GSN +GQLG EE+ P + +L + A G T+ +++
Sbjct: 46 HTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET 105
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G + ++G D +G+ + P++V+ +++ + A G + T L+ G VY+F
Sbjct: 106 GALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSF 165
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G+ LGH P L+ +L + V QIA G + AL V++ G G
Sbjct: 166 GDGSSGALGHGNLDGCSTP-SLVKSLWGLGVTQIACGENHSAALTVDGK---VFTWGRGK 221
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LGHGS + K P ++ L++ + +A G H + DGR+ +WG G +G GH
Sbjct: 222 YGQLGHGSTQNIKLPVAVK--ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH 279
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK V L + V+ G T V+ + G+VY +G E LG
Sbjct: 280 GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 140/291 (48%), Gaps = 14/291 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VY+ G GQLG G + P + +L G I+ AA T ++D G+VY G +
Sbjct: 4 VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 181
G+ GV+G + P V +L V A G T ++ G + SWG D +L
Sbjct: 64 AGQ--LGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALA--SWGGDEYGQL 119
Query: 182 GHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
G + + V+P + G+ ++ ++AAG + LAL VYS G G G LGH
Sbjct: 120 GFDSGNIVDGVQPRIVKGS-RDLHFSRVAAGGYHTLALTGSGD---VYSFGDGSSGALGH 175
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G+ P L++ L L +A G H+A + DG+V TWG G+YG LGHG+ +
Sbjct: 176 GNLDGCSTPSLVKS--LWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI 233
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+P V+AL D I +A G T ++ DG ++S+G G GH D
Sbjct: 234 KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKED 284
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ AG H++A+T G VYSFG SSG LGHG + P ++SL G+ + Q A G
Sbjct: 144 SRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGEN 203
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+ +G+ +G+ +G T+ + P V++L + V+Q A G T ++
Sbjct: 204 HSAALTVDGKVFTWGRGKYGQLGHG--STQNIKLPVAVKALVDHDVIQIACGGDHTLAIT 261
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+GR++++ G + GH T+ + + P + LE +VQ++AG + + L
Sbjct: 262 SDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARHTVVL 312
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 31 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
++ +A +A + Q G H++A+TS G ++S+G GQ GHGT E+ P+ +
Sbjct: 233 IKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH 292
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
L+G ++Q +AGA T+++ D G+VY +G
Sbjct: 293 QLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+AVY++G G G+LG G +D HP L+ V +AA +H A + +G V T
Sbjct: 1 GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G LG E + VP V AL+ H+A G T V+E G + S+G E
Sbjct: 59 TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118
Query: 343 LGHNA--IADG 351
LG ++ I DG
Sbjct: 119 LGFDSGNIVDG 129
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG S+ + S +G +Y+ G ++G+LG G + PRPI L I+ + +G
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2152
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + + P+++E+L++ + A G+ +A ++
Sbjct: 2153 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 2210
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ +L +VQ+A G LA G
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 2268
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ L + V + GA + + + G V TWG
Sbjct: 2269 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 2326
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHG+++ P V+++L D K IHVA G V++ G VY++G + G+
Sbjct: 2327 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2386
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G+VYA G
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G G + LV P L+ES++++F+ + A+ G LS + VY++ G+D
Sbjct: 3091 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3148
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH E L+ L+ ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 3149 KLGHGNRLA-CETPKLIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 3204
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+LIE+ + V +G + D V +WG G YG LG G +
Sbjct: 3205 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 3264
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VPK +++L + I V G + ++ G VY++G G+ LGH
Sbjct: 3265 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 3310
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q + G AVT+ G VY+ G + G+LG G T+ P + S+Q + I
Sbjct: 3059 EALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFI 3118
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S VY++G+ G+ +G + +P+L+E+L+ ++ A
Sbjct: 3119 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLIEALQGYEIIDIA 3176
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G++YT+ G RLGH + ++P L+ L V+ +A G
Sbjct: 3177 CGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQ 3235
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P+ IE L L + V G+ + +
Sbjct: 3236 TL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALT 3292
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG E PK V AL K I +ATG S++G+V+++
Sbjct: 3293 RSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTW 3352
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ S L
Sbjct: 3353 GDNDEGQLGDDTTNAIQRPRLVSAL 3377
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I +L+ +I A G+ +
Sbjct: 2149 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 2208
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ +G++Y +G +G +G T+L P+L++SL +VQ A G+ L+
Sbjct: 2209 ITSSGELYTWGLGEYGRLGHGDNITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDE 2266
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ FSWG+ +LG PH + L + VVQI G + LAL V+
Sbjct: 2267 GWVFSWGDGDFGKLGRGGSEGCNIPHNI-ERLNALEVVQIECGAQFSLALT---KTGEVW 2322
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P +IE + + + + VA GA H V G+V WG
Sbjct: 2323 TWGKGDYFRLGHGSDQHVRKPTVIESLK--DKKVIHVAVGALHCLAVTDTGQVYAWGDND 2380
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L DV VA G
Sbjct: 2381 HGQQGNGTTIVNRKPALVHGLEDVHINRVACG 2412
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+++ VYS+G G+LGHG P+ I +LQG II A G +
Sbjct: 3125 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 3184
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ GQ+Y +GK +G +G +L P+L+E L V+ A G+ T ++ +
Sbjct: 3185 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 3242
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG +VY
Sbjct: 3243 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 3298
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+ + Q + + +A G+ H +G V TWG
Sbjct: 3299 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 3356
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
G LG P++V AL K +VA G T S +
Sbjct: 3357 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTNN 3399
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A+TS G +Y++G G+LGHG + +P+ I+SL G RI
Sbjct: 2189 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 2248
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ ++D G V+++G FG+ G G++ P +E L + VVQ
Sbjct: 2249 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 2306
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L++ G V+T+ G+ RLGH ++ + +P ++ +L++ V+ +A G + L
Sbjct: 2307 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 2365
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 274
A+ VY+ G G+ G+G+ + P L+ + +++ VA G+ H+ A
Sbjct: 2366 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 2420
Query: 275 GQDGRVCT 282
QD +V +
Sbjct: 2421 LQDTQVVS 2428
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 22/315 (6%)
Query: 45 NSQAIAGPGHSIAVTSKGV----------VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
N + I GP S V V+ +G N QLG + P L
Sbjct: 2028 NQEQIPGPSTSANVAQDSTGEPSSTVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQ 2087
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ I A G+ ++S G++YA G+ + G G+ + V P+ + L + +
Sbjct: 2088 LWPIHIAGGSKSLFIVSHEGKLYACGEGTNGR--LGLGHSNNVPYPRPIPFLSQYVIKKV 2145
Query: 155 AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A+ G L+ +G+V+++ G D +LGH N +P ++ L + + IA G
Sbjct: 2146 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPK-MIEALRSKKIRDIACGSS 2204
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ A+ S +Y+ G G G+LGHG + P+LI+ L+ + V VA G+ A
Sbjct: 2205 HSAAIT---SSGELYTWGLGEYGRLGHGDNITQLKPKLIK--SLVGHRIVQVACGSRDAQ 2259
Query: 273 VVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ +G V +WG G +G LG G E ++P ++ LN ++ + + G + +++ G
Sbjct: 2260 TLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTG 2319
Query: 331 DVYSFGCGESASLGH 345
+V+++G G+ LGH
Sbjct: 2320 EVWTWGKGDYFRLGH 2334
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
L+R +T SWG + H + +E P P L + VQ+ G
Sbjct: 3016 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3074
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
L A+ VY+ G G GG+LG G P L+E Q + ++ + V +G H
Sbjct: 3075 TLFAVTADGK---VYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3131
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ D V +WG G G LGHGN PK+++AL + I +A G + ++ G +
Sbjct: 3132 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 3191
Query: 333 YSFGCGESASLGHNAIAD 350
Y++G G LGH D
Sbjct: 3192 YTWGKGRYGRLGHGDSED 3209
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G +AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3732 EALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3791
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3792 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3849
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3850 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3908
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3909 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3965
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3966 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4025
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4026 GDNDEGQLGDGTTNAIQRPRLVAAL 4050
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G + ++ G++YA G
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3764 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3821
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3822 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3877
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3878 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3937
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3938 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3983
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3798 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3857
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3858 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3915
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3916 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3971
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3972 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4030 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4069
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2804
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2805 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2861
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2862 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2920
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2921 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2976
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2977 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3036
Query: 339 ESASLGH 345
+ G+
Sbjct: 3037 DHGQQGN 3043
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 596 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 653
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 654 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 701
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2702 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2761
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2762 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2820
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2876
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 130/286 (45%), Gaps = 54/286 (18%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ + G VYS+G +LGHG T P+ I + G + AG+
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQ-------AGK------- 528
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
VV A G+ ++A ++ EG +YT+
Sbjct: 529 ------------------------------------HVVHIACGSTYSAAITAEGELYTW 552
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S G G
Sbjct: 553 GRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGD 610
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G LGH
Sbjct: 611 YGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 668
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 669 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 714
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 26/268 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
P + L + + Q A R +++ G+V A+ D+ PQLV
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTL--------------VPQLV 464
Query: 144 ESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---G 197
+ L + VV+ A G+ + A L+ G VY++ G+ RLGH EP + G
Sbjct: 465 QGLASRNVVKIAAHSDGHHYLA-LAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSG 523
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 640
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VYS+G G++ LGH
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGH 668
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2865
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2866 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2975
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2976 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3032
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3069
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 563 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 622
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 623 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 680
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 681 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 738
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 739 HIVGIACG 746
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G LLA+
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLLAVTAD 3755
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3756 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3815
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3816 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3931
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3008
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3009 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066
Query: 155 AIGN 158
A G+
Sbjct: 3067 ACGS 3070
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G LGHG+ P
Sbjct: 456 SDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEP 515
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 516 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 574
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3017 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3074
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 114 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 173
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 174 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 231
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 232 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 287
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 288 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 345
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 346 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 385
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 153/307 (49%), Gaps = 11/307 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 57 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 116
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 117 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 174
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 175 TAAGDLYTWGKGRYGRLGHSDSEDQLKP-KLVEALQGHRVVDIACGSGDAQTL-CLTDDD 232
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 233 TVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWG 290
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 291 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 350
Query: 345 H---NAI 348
NAI
Sbjct: 351 DGTTNAI 357
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 20 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G + GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 80 GAGGRLG--IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 137
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 138 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 193
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 194 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 253
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 301
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 99/232 (42%), Gaps = 56/232 (24%)
Query: 167 EGRVYTFSWGNDAR--LGHHTEPNDVEPHPL--LGTLENIPVVQ--------------IA 208
+G + WG++ R LG P P L TL + ++ A
Sbjct: 17 QGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 76
Query: 209 AGY-------------------------CYLLALACQPSGM---------AVYSVGCGLG 234
GY ++ +A G VYS G
Sbjct: 77 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 136
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLGHG+R+ PR+IE L ++ V VAAG H+A V G + TWG GRYG LGH
Sbjct: 137 GKLGHGNRSPCDRPRVIE--SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 194
Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLG 344
+ E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 195 DSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 246
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT+ T P+ ++SL ++ +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG + L+ +L IP QIAAG + AL SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 347 AIAD 350
+ ++
Sbjct: 331 STSN 334
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 14/284 (4%)
Query: 68 GSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
G+ S GQLG G +EE PR + G T+ + D G VY G + G
Sbjct: 5 GNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 184
+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 65 QLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPG 120
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 243
TE P + +L ++ +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 121 TEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDLK 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+LI+ LL + +AAG H+ + G V WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPN 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
++++L K ++++ G+ T ++++G V++FG G LGHN+
Sbjct: 235 LLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS A+T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ + G ++ +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
GR+Y+F G + +LG + N P P+ G
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V+SP L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3650 GA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3707
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3708 KLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3763
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3764 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3823
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3824 KVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3869
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3618 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFI 3677
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3678 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVA 3735
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3736 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3794
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3795 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDS--LTGLGVVKVECGSQFSVALT 3851
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3852 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3911
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3912 GDNDEGQLGDGTTNAIQRPRLVAAL 3936
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG+ RPR I SL+GI ++ AAG +
Sbjct: 3684 SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3743
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3744 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3801
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3802 DTVWSWGDGDYGKLGRGGSDGCKVPTK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3857
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3858 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3915
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 3916 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 3955
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S +G+VY A+ D+ +PQLV+ L +
Sbjct: 137 LANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTL--------------APQLVQGLASR 182
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 183 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHV 242
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 243 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 299
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 300 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH 380
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 128 VIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDT----------LAPQ-LV 176
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P+ I
Sbjct: 177 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKAISA 232
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 233 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 292
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 293 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 328
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2631 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAV 2690
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2691 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2747
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2748 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2806
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2807 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2862
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2863 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2922
Query: 339 ESASLGH 345
+ G+
Sbjct: 2923 DHGQQGN 2929
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 307
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 308 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 365
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 366 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 413
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+ +
Sbjct: 173 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKAI 230
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 231 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 289
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 290 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 348
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 349 --VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 406
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 407 STHCLALTEDSEVHSWGSND 426
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2594 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2653
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 2654 CGEATNGRLGLGL-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 2713 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 2768
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E +VP+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2827 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2877
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2751
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2752 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2809
Query: 168 GRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2810 GLVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2861
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2862 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 2918
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2955
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 312
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 313 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 368
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 369 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 423
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 424 ------SNDQCQ 429
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 275 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 334
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 335 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 392
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 393 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 450
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 451 HIVGIACG 458
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3641
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3642 GKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3701
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHGSR+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3702 GEAEDGKLGHGSRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3817
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2840 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2894
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2895 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2952
Query: 155 AIGN 158
A G+
Sbjct: 2953 ACGS 2956
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2903 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2960
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 85
W ++ L + C +AG +S+A+T G ++++G N G LGH T+ E
Sbjct: 28 WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
P +++L ++I+QAA G + + D G+ YA+G + +G+ G + +
Sbjct: 82 PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
PQ + V Q A G + VL+REG V+T+ G P D+ +
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191
Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
++ + +V+ IA G + LAL Q G +++ G G+LG G P ++
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 314
L L V +AAG WH+ + +G V WG G +G LG G+ + S VP+ VQ L+ + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ G + V+ DG ++SFG G+ LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 24/310 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ ++GS GQLG G EE I++L+ + AG+ ++ I++ G+++ +G +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + GTK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 184 HTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
E D P + IP V Q+AAG + + L + V++ G
Sbjct: 126 EPEKKDNTGRPPRRDIA-IPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQ 177
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G T P ++ ++ L +A GA+H + +DG + WG YG LG G+
Sbjct: 178 PWPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ S P VQ L+ + + +A G + + ++++G+VY +G GE LG D S
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLG---FGDNDKSS 290
Query: 356 LLFLSIFQYL 365
+ Q L
Sbjct: 291 KMVPQKVQLL 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDN 267
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY +G+ G +G PQ V+ L +VQ + G + ++ +GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 174 SWGNDARLGHHTEPNDVEPH-------PLLGTLENIPVVQ--IAAGYCYLLAL 217
G+ RLG+ + +P P G EN + +A G + LAL
Sbjct: 328 GRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+G A+ + G G G+LG G+ + + I+ + N+ VV AG+ ++ + +DG++
Sbjct: 3 AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60
Query: 282 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWGW + G LGH + E+VP V+AL++VK + A G + V + G Y++G E
Sbjct: 61 TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 341 ASLGH 345
G
Sbjct: 121 GQCGE 125
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 85
W ++ L + C +AG +S+A+T G ++++G N G LGH T+ E
Sbjct: 28 WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
P +++L ++I+QAA G + + D G+ YA+G + +G+ G + +
Sbjct: 82 PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
PQ + V Q A G + VL+REG V+T+ G P D+ +
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191
Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
++ + +V+ IA G + LAL Q G +++ G G+LG G P ++
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 314
L L V +AAG WH+ + +G V WG G +G LG G+ + S VP+ VQ L+ + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ G + V+ DG ++SFG G+ LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 24/310 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ ++GS GQLG G EE I++L+ + AG+ ++ I++ G+++ +G +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + GTK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 184 HTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
E D P + IP V Q+AAG + + L + V++ G
Sbjct: 126 EPEKKDNTGRPPRRDIA-IPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQ 177
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G T P ++ ++ L +A GA+H + +DG + WG YG LG G+
Sbjct: 178 PWPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ S P VQ L+ + + +A G + + ++++G+VY +G GE LG D S
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLG---FGDNDKSS 290
Query: 356 LLFLSIFQYL 365
+ Q L
Sbjct: 291 KMVPQKVQLL 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDN 267
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY +G+ G +G PQ V+ L +VQ + G + ++ +GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 174 SWGNDARLGHHTEPNDVEPH-------PLLGTLENIPVVQ--IAAGYCYLLAL 217
G+ RLG+ + +P P G EN + +A G + LAL
Sbjct: 328 GRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+G A+ + G G G+LG G+ + + I+ + N+ VV AG+ ++ + +DG++
Sbjct: 3 AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60
Query: 282 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWGW + G LGH + E+VP V+AL++VK + A G + V + G Y++G E
Sbjct: 61 TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 341 ASLGH 345
G
Sbjct: 121 GQCGE 125
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 25/330 (7%)
Query: 7 IFKPMTEAERQDLKQ-KCGGSWK-LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVV 64
+ KP+ A R D++ CGG LV + +A G H+ AVT G +
Sbjct: 197 VPKPLEFAVRLDVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDL 256
Query: 65 YSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
Y++G + G LGHG W P+ + L+GI + + G T L++ AGQ++ FG
Sbjct: 257 YTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGD 316
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREGR 169
SFG +G + + ++ P+ VESLK + V+AA G + TA + G+
Sbjct: 317 GSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGK 374
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++T+ G+ RLGH + + P + +E Q+A G+C +AL SG VY++
Sbjct: 375 IFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHCLTVALTT--SGH-VYTM 430
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G + G+LG+ ++ D P +E N + + GA+H AV+ V TWG G G
Sbjct: 431 GSAVYGQLGN-AQADGMLPVRVEGKLYKNFVEEI-SCGAYHVAVLTSRTEVYTWGKGANG 488
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATG 319
LGHG+ E ++ P +V+AL D + +V G
Sbjct: 489 RLGHGDTEDKNTPTLVEALKDKQVRNVVCG 518
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 298 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 357
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 415
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 416 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLYKNFVEEISCGAYHVAVLT 474
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 475 ---SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIHKWV 531
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 532 SGVDQSMCS 540
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLL 196
+L+++L ++ + A G + T ++ G +YT WG+ LGH + + P +
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVN 284
Query: 197 GTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
G LE I V I+ G + L+ A Q +++ G G G LGHG R PR +E
Sbjct: 285 GPLEGIHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRESISVPREVESL 339
Query: 255 QLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVP 302
+ L+ V A G WH A V + G++ TWG G G LGHG++E + VP
Sbjct: 340 K--GLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVP 397
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V AL + VA G T ++ G VY+ G LG NA ADG +
Sbjct: 398 TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADGML 447
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 785 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 844
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 845 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 902
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 903 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 961
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 962 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 1018
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 1019 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1078
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 1079 GDNDEGQLGDGTTNAIQRPRLVAAL 1103
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 851 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 910
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 911 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 968
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 969 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 1024
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 1025 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 1082
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 1083 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 1122
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 809
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 810 KLYATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 867
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 923
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 924 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 984 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 1038
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 23 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 82
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 83 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 140
Query: 169 RVYT---FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
V+T ++WG++ + G+ T + +P L+ LE + ++A G + +A
Sbjct: 141 VVWTWQVYAWGDNDHGQQGNGTTTVNRKPT-LVQGLEGQKITRVACGSSHSVA 192
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+L+E+LK + A G+ +A L+ G +YT+ G RLGH ++P ++ L
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVL 64
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
V+Q+A G LA G+ V+S G G GKLG G P+ IE+ LN
Sbjct: 65 LGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNG 120
Query: 260 QPVV-VAAGAWHAAVVGQDGRVCTW---GWG--RYGCLGHGNEECESVPKVVQALNDVKA 313
Q V + GA + + + G V TW WG +G G+G P +VQ L K
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180
Query: 314 IHVATG 319
VA G
Sbjct: 181 TRVACG 186
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
PRLIE + ++ + A G+ H+A + G + TWG G YG LGHG+ + PK+V+
Sbjct: 6 PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 63
Query: 308 LNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 103
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 806
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 807 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 865
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 866 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 925
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 926 GRLGHSDSED 935
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L+ + IA G + AL S +Y+ G G G+LGHG T + P++++
Sbjct: 8 LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63
Query: 255 QLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
LL + + VA G+ A + +G V +WG G +G LG G E ++P+ ++ LN
Sbjct: 64 -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122
Query: 313 AIHVATGDYTTFVVSEDGDVYSF 335
+ G + +++ G V+++
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTW 145
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGV-----VYSFGSNSSGQLGHGTTEEEWRPRPI 89
L G+ C+ E G S+A+T GV VY++G N GQ G+GTT +P +
Sbjct: 118 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLV 172
Query: 90 RSLQGIRIIQAAAGAGRTM 108
+ L+G +I + A G+ ++
Sbjct: 173 QGLEGQKITRVACGSSHSV 191
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 295 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 354
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 355 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 412
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 413 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 468
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 469 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 526
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 527 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 566
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 229 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 288
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 289 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 346
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 347 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 405
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 406 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 462
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 463 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 522
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 523 GDNDEGQLGDGTTNAIQRPRLVAAL 547
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 261 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 318
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 319 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 374
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 375 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 434
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 435 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 482
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 96/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 252
Query: 221 PSGMA------------------------------VYSVGCGLGGK-------------- 236
A + V GGK
Sbjct: 253 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 312
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE L ++ V VAAG H+A V G + TWG GRYG
Sbjct: 313 GEAEDGKLGHGNRSPCDRPRVIE--SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 370
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + VA +GD T +++D V+S+G G+ LG
Sbjct: 371 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 428
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 251 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 310
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 311 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 368
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 369 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 427
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 428 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 484
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 485 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 544
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 545 GDNDEGQLGDGTTNAIQRPRLVAAL 569
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 275
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 276 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 333
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 389
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 450 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 504
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 317 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 376
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 377 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 434
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 435 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 490
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 491 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 548
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 549 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 588
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 329 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 388
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 389 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 446
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 447 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 505
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 506 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 562
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 563 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 622
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 623 GDNDEGQLGDGTTNAIQRPRLVAAL 647
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 353
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 354 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 411
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 467
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 528 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 582
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 395 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 454
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 455 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 512
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 513 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 568
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 569 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 626
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 627 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 666
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3993 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4050
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV IAAG + AC + +++ G G G+LGH
Sbjct: 4051 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4106
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4107 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4166
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4167 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4212
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4027 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4086
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4087 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4144
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4145 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4200
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4201 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4258
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4259 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3961 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4020
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4021 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4078
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4079 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4137
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4138 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4194
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4195 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4254
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4255 GDNDEGQLGDGTTNAIQRPRLVAAL 4279
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS LG P+ ++SL I++ AA + + +S
Sbjct: 441 LILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIVKIAAHSDGHHYLALSAN 490
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+L+ +L VV A G+ ++A ++ EG
Sbjct: 491 GEVFSWGCGDGGRLGHG--DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGE 548
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + + P + G L+ + V+ ++ G LA +G V+S
Sbjct: 549 LYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQ-VWSW 606
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V TWG G
Sbjct: 607 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQ 664
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 665 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 714
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D+ G PQLV+SL +
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 470
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A LS G V+++ G+ RLGH EP L G V
Sbjct: 471 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 530
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 531 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 587
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 588 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VY++G G++ LGH
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH 668
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2973 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3032
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3033 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3090
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3091 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3149
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3150 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3205
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3206 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3265
Query: 340 SASLGH 345
G+
Sbjct: 3266 HGQQGN 3271
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E L ++ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 416 VSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 464
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P+LI
Sbjct: 465 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 520
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 521 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 580
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 581 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 616
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2930 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2989
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 2990 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3048
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3049 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3104
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3105 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3162
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3163 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3219
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 595
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 653
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 654 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLALT 702
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G ++S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3034 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3093
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3094 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3151
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3152 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3203
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3204 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3260
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 542
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 600
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 656
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 657 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 711
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 712 ------SNDQCQ 717
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 707 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3926 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3984
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3985 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4044
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 4045 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4103 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4160
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3182 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3236
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3237 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3294
Query: 155 AIGN 158
A G+
Sbjct: 3295 ACGS 3298
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + +G V +WG G G LGHG+ P
Sbjct: 456 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 515
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 516 KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 574
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3245 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3302
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 152/308 (49%), Gaps = 23/308 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV G V+++G N GQLG GT + P + L G+ I A G T
Sbjct: 264 AGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI--AEGRRHTFA 321
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G + +L +P V L ++ + A G++ T + ++G
Sbjct: 322 VRQDGTVWAWGLNFWGQLGDGTRSDRL--TPVQVPDLTSVTAI--AAGDYHTLAVRQDGT 377
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++ +LG T + + P + G V IAAG + +A+ + V+
Sbjct: 378 VW--AWGDNVWGQLGDGTYTDRLTPVQVPGLTG---VTAIAAGESHTVAMRQDGT---VW 429
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G + G+LG G+ TD P Q+ +L V +AAG +H V QDG VC WG+
Sbjct: 430 AWGDNVWGQLGDGTYTDRLTP-----VQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG G P +V L V +A GD T V +DG V+++G S LG
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGD 544
Query: 346 NAIADGQV 353
A D ++
Sbjct: 545 GATIDRRI 552
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 24/304 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H+ AV+ G V+++G N GQLG GT + P + L G+ I AAG T
Sbjct: 114 AGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI--AAGRRHTFA 171
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +++G+ G + +L +P V L + + A G++ T + ++G
Sbjct: 172 VRQDGTVWAWGDNAWGQLGDGTRTNRL--TPVQVPGLTGVTAI--AAGDYHTLAVRQDGT 227
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN+A +LG T + P + G V I+AG + +A+ + V+
Sbjct: 228 VW--AWGNNALGQLGDGTYTERLTPVQVPGLTG---VTAISAGESHTVAVRQDGT---VW 279
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G + G+LG G+RTD P Q+ L V +A G H V QDG V WG
Sbjct: 280 AWGDNVWGQLGDGTRTDRLTP-----VQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLN 334
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
+G LG G P V L V AI A GDY T V +DG V+++G LG
Sbjct: 335 FWGQLGDGTRSDRLTPVQVPDLTSVTAI--AAGDYHTLAVRQDGTVWAWGDNVWGQLGDG 392
Query: 347 AIAD 350
D
Sbjct: 393 TYTD 396
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 149/308 (48%), Gaps = 32/308 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV G V+++G N+SGQLG G T + P I L G+ I AAG+ T+
Sbjct: 517 AGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTAI--AAGSAHTLA 574
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
G V+++G +S+G+ G +L SP V L + + A G+ + L ++G
Sbjct: 575 AGQDGAVWSWGANSYGQLGDGTTTHRL--SPVQVPGLTGVSAM--AAGDAHSVALLQDGT 630
Query: 170 VYTF---SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
V + SWG +LG T + P H L G V +AAG + +AL +
Sbjct: 631 VSAWGRNSWG---QLGDGTTAARLTPVQVHGLTG------VTAVAAGSLHTVALRQDGT- 680
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
V++ G G+LG G+ T R + Q+ L V +AAG +H V QDG V
Sbjct: 681 --VWAWGYNDLGQLGDGTTT-----RRLAPVQVQGLTDVTAIAAGYFHTVAVRQDGTVWA 733
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG+ +G LG G+ S P VQ L V A+ A G T V +DG V+++G
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQELTGVSAL--AAGYAHTVAVKQDGTVWAWGNNSGTQ 791
Query: 343 LGHNAIAD 350
LG+ + D
Sbjct: 792 LGNGSSTD 799
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 18/301 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A G V+S+G+NS GQLG GTT P + L G+ + AAG ++
Sbjct: 567 AGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVSAM--AAGDAHSVA 624
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V A+G++S+G+ G +L +P V L + V A G+ T L ++G
Sbjct: 625 LLQDGTVSAWGRNSWGQLGDGTTAARL--TPVQVHGLTGVTAV--AAGSLHTVALRQDGT 680
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + +LG T + P + G + V IAAGY + +A+ + V++
Sbjct: 681 VWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD---VTAIAAGYFHTVAVRQDGT---VWAW 734
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G L G+LG GS T P +++ ++ +AAG H V QDG V WG
Sbjct: 735 GYNLWGQLGDGSSTARSTPVQVQELTGVS----ALAAGYAHTVAVKQDGTVWAWGNNSGT 790
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG+G+ P V+ L V A+ G + T VS +G +++G +G A
Sbjct: 791 QLGNGSSTDRYTPVWVEGLTGVSAL--TAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTA 848
Query: 350 D 350
D
Sbjct: 849 D 849
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 24/304 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV G +++G+N+ GQLG GT + P + L G+ + AAG T
Sbjct: 14 AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTAV--AAGRHHTFA 71
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G + +P V L + + A G T +S++G
Sbjct: 72 VRQDGTVWAWGLNVWGQLGDGTHTERH--TPVQVPGLTGVTAI--AAGRRHTFAVSQDGT 127
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++ +LG T + P L E V IAAG + A+ + V+
Sbjct: 128 VW--AWGDNDWGQLGDGTRADRHTPVQL---PELTGVTAIAAGRRHTFAVRQDGT---VW 179
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G+RT+ P Q+ L V +AAG +H V QDG V WG
Sbjct: 180 AWGDNAWGQLGDGTRTNRLTP-----VQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNN 234
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG G P V L V AI + G+ T V +DG V+++G LG
Sbjct: 235 ALGQLGDGTYTERLTPVQVPGLTGVTAI--SAGESHTVAVRQDGTVWAWGDNVWGQLGDG 292
Query: 347 AIAD 350
D
Sbjct: 293 TRTD 296
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 19/293 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ AV G V+++G N GQLG GT + P + L + I AAG T+ +
Sbjct: 318 HTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTSVTAI--AAGDYHTLAVRQD 375
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + +G+ G +L +P V L + + A G T + ++G V+
Sbjct: 376 GTVWAWGDNVWGQLGDGTYTDRL--TPVQVPGLTGVTAI--AAGESHTVAMRQDGTVW-- 429
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WG++ +LG T + + P + + V IAAG + LA+ + V + G
Sbjct: 430 AWGDNVWGQLGDGTYTDRLTP---VQVPDLTSVTAIAAGDYHTLAVRQDGT---VCAWGF 483
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ + P ++ + + +AAG H V QDG V WG G L
Sbjct: 484 NAYGQLGDGTSSRSPSPVMVPGLTGVTVF-AALAAGDSHTVAVMQDGTVWAWGLNASGQL 542
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G +P + L V AI A G T +DG V+S+G LG
Sbjct: 543 GDGATIDRRIPVQIPGLAGVTAI--AAGSAHTLAAGQDGAVWSWGANSYGQLG 593
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 16/257 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S AG HS+A+ G V ++G NS GQLG GTT P + L G+ + AAG+
Sbjct: 613 SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAV--AAGSL 670
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G V+A+G + G+ G +L +P V+ L ++ + A G F T +
Sbjct: 671 HTVALRQDGTVWAWGYNDLGQLGDGTTTRRL--APVQVQGLTDVTAI--AAGYFHTVAVR 726
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G V+ + + +LG + P + E V +AAGY + +A+ +
Sbjct: 727 QDGTVWAWGYNLWGQLGDGSSTARSTP---VQVQELTGVSALAAGYAHTVAVKQDGT--- 780
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G G +LG+GS TD P +E ++ + AG +H A V +G WG
Sbjct: 781 VWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVS----ALTAGRFHTAAVSPEGFGWAWGR 836
Query: 286 GRYGCLGHGNEECESVP 302
+G +G G P
Sbjct: 837 NNFGQVGDGTTADRPRP 853
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG +Y++ D
Sbjct: 2823 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 2880
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L + VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 2881 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELYTWGKGRYGRLGH 2936
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 2937 GDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 2996
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2997 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3044
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G +YS+G G+LGHG RPR I SL+G+ ++ AAG +
Sbjct: 2857 SGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 2916
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ +G++Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 2917 ITASGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGHRVIDVACGSGDAQTLCLTDD 2974
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 2975 DMVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3030
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3031 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3088
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 3089 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 2791 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2850
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G++Y++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 2851 RKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 2908
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 2909 AGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGHRVIDVACGSGDAQ 2967
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L M V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 2968 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3024
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3025 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3084
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3085 GDNDEGQLGDGTTNAIQRPRLVAAL 3109
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 1759 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTA 1818
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 1819 EGKVYACGEATNGRLGLGL-SSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 1877
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 1933
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P+L++ LL + V VA G+ A + +G V +WG G +
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVK--VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT++G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 1802 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV 1861
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1862 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1919
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH + P L+ L VVQ+A G LA
Sbjct: 1920 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVVQVACGSRDAQTLALT 1978
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
GM V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1979 DEGM-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2034
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V+E G V+++G +
Sbjct: 2035 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND 2094
Query: 340 SASLGH 345
G+
Sbjct: 2095 HGQQGN 2100
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 1863 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 1922
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y++G +G +G T+L P+LV+ L VVQ A G + T L+ E
Sbjct: 1923 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVVQVACGSRDAQTLALTDE 1980
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2032
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V + G+V
Sbjct: 2033 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTETGQVFA 2089
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2126
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVTAD 2814
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 2815 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSW 2874
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 2875 GEAEDGKLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASGELYTWGKGRYG 2932
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I VA +GD T +++D V+S+G G+ LG
Sbjct: 2933 RLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGR 2990
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2011 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 2065
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + +++ GQV+A+G + G+ G T + P LV+ L+ + +
Sbjct: 2066 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2123
Query: 155 AIGN 158
A G+
Sbjct: 2124 ACGS 2127
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G V+++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2074 GALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 1573 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 1632
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 1633 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 1690
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 1691 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 1749
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 1750 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 1806
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 1807 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1866
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 1867 GDNDEGQLGDGTTNAIQRPRLVAAL 1891
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 1605 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 1662
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 1663 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 1718
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 1719 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 1778
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 1779 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 1826
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 1639 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 1698
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 1699 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 1756
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 1757 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 1812
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 1813 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 1870
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 1871 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 1910
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 586 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 645
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 646 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 702
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 703 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 761
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 762 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 817
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 818 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 877
Query: 339 ESASLGH 345
+ G+
Sbjct: 878 DHGQQGN 884
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 147/295 (49%), Gaps = 11/295 (3%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A T + V+ +G N QLG + P +L + ++Q A G+ ++ G+V
Sbjct: 547 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 606
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
YA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++
Sbjct: 607 YACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 665
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G
Sbjct: 666 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 721
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG
Sbjct: 722 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 779
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 780 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 834
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 706
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 707 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 764
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 765 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 816
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 817 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 873
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 910
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 1538 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 1596
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 1597 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1653
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 1654 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1713
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 1714 GRLGHSDSED 1723
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 795 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 849
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 850 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 907
Query: 155 AIGN 158
A G+
Sbjct: 908 ACGS 911
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 858 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 915
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 24/317 (7%)
Query: 49 IAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G +++AV +S+G +YS+G G+LGHG + + PRPI G + + A G T
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT 127
Query: 108 MLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++++ G +Y FG++ G+ G+ T SPQLV +L+ V A G+ + +
Sbjct: 128 LVVTQGDGALYTFGRNQNGQ--LGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE 185
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G V+++ WG LG + P ++G L+ + V + G+ + + + V
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVTDEGR---V 241
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 285
++ G G+LGHG D P L+ Q + V AG W H +G + WGW
Sbjct: 242 FTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV---AGGWRHTMAADSEGNLYAWGW 298
Query: 286 GRYGCLGHGNEECESVPKVVQALNDV------------KAIHVATGDYTTFVVSEDGDVY 333
++G LG G+ E + P V + +A G T V+E G+VY
Sbjct: 299 NKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVY 358
Query: 334 SFGCGESASLGHNAIAD 350
S+G G + LGH A D
Sbjct: 359 SWGRGVNGQLGHGAEQD 375
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 12/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HSIA+ GVV S+G GQLGHG ++ P I +L + GA T+ +
Sbjct: 18 GSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAV 77
Query: 111 -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EG 168
S GQ+Y++G FG +G G V P+ + V + A G+ T V+++ +G
Sbjct: 78 ASSRGQIYSWGWGDFGRLGHGECGDVFV--PRPIAFFSGRPVARVACGDTHTLVVTQGDG 135
Query: 169 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+YTF + +LG HT ND L+ L+ V +A G + +LA +G V+
Sbjct: 136 ALYTFGRNQNGQLGLGHT--NDCLSPQLVTALQGERVSSVACGSEH--SLAATEAGT-VF 190
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G G LG G D P + + + VV G H+AVV +GRV T+GW +
Sbjct: 191 SWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVC--GWRHSAVVTDEGRVFTFGWSK 248
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LGHG+ + P +V L + VA G T +G++Y++G + LG
Sbjct: 249 YGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLG 305
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 8/256 (3%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R++ + G+ ++ + D G V ++G+ G+ +G TSP + +L + V
Sbjct: 11 RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDAVV 68
Query: 156 IGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G +T AV S G++Y++ WG+ RLGH + P P+ PV ++A G +
Sbjct: 69 CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHT 127
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L + Q G A+Y+ G G+LG G D P+L+ Q + V A G+ H+
Sbjct: 128 LVVT-QGDG-ALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSV--ACGSEHSLAA 183
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V +WGWGRYG LG G+ + P V L+ V V G + VV+++G V++
Sbjct: 184 TEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFT 243
Query: 335 FGCGESASLGHNAIAD 350
FG + LGH D
Sbjct: 244 FGWSKYGQLGHGDHVD 259
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G HS+A T G V+S+G G LG G +++ + P + L G+ + G
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++D G+V+ FG +G+ +G T P LV L++ V A G T
Sbjct: 231 HSAVVTDEGRVFTFGWSKYGQLGHGDHVDH--TRPCLVAGLQHCRVSTVAGGWRHTMAAD 288
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG---------TLENIP--VVQIAAGYCYL 214
EG +Y + W +LG + P P+ G P V +A G+ +
Sbjct: 289 SEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHT 348
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+A+ VYS G G+ G+LGHG+ D
Sbjct: 349 VAVT---EAGEVYSWGRGVNGQLGHGAEQD 375
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 1017 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 1076
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 1077 KKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 1134
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 1135 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 1193
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 1194 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 1250
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 1251 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1310
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 1311 GDNDEGQLGDGTTNAIQRPRLVAAL 1335
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 982 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 1041
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 1042 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 1099
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 1155
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 1156 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1215
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 1216 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 1270
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 1083 SGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 1142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 1143 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 1200
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 1201 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 1256
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 1257 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 1314
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 1315 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 1354
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 29 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 88
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 89 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 145
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 146 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 204
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 205 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 260
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 261 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 320
Query: 339 ESASLGH 345
+ G+
Sbjct: 321 DHGQQGN 327
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 90 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 149
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 150 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 207
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 208 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 259
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 260 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 316
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 353
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 68 GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
G N QLG + P +L + ++Q A G+ ++ G+VY+ G+ + G
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 185
G+ + V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH +
Sbjct: 61 GLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 119
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T +
Sbjct: 120 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 175
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 303
P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P+
Sbjct: 176 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 233
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 234 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 277
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 982 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 1040
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 1041 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG + G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 1098 YSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1157
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 1158 GRLGHSDSED 1167
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 238 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 292
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 293 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 350
Query: 155 AIGN 158
A G+
Sbjct: 351 ACGS 354
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 304 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 358
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 151/285 (52%), Gaps = 24/285 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G + G LGHG W P+ I +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
LI+ GQ++ FG SFG +G K V+ P+ VESL + + A G + TA
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 163 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+++R G+++T+ G+ RLGH + ++P + TL + ++A G+
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL + V S+G + G+LG+ +D + P L+E +++ Q + +A G++H AV+
Sbjct: 314 VALT---TSGQVLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVLQIACGSYHVAVL 368
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP +V+AL D ++A G
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACG 413
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L+ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH + P + G LE +
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQ 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG +PR +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
VA G WH A + + G++ TWG G LGHG++E P V L D
Sbjct: 241 VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID 300
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF--QYLQI 367
VA G T ++ G V S G LG N +DG++ L+ I Q LQI
Sbjct: 301 HDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLG-NPHSDGRIPCLVEDKIVGEQVLQI 358
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ + G+
Sbjct: 44 QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTK--RPLLIPELQDYVIIQISCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + +++ P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ P D+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 18/289 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ + + + + P L+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDHSQLGHDLPTKR----PLLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH T+ ++ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 240 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV K +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VEQVACGHRHTLFLT---ANGKVYACGSNDHSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
++ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPKDLTHCN 187
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4317
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +SD GQ++++G S G+ G+ + V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQ--LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+ AG + AL+
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRV-RSLEGIPLAQVVAGGAHSFALSL- 207
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G + G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAG--QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 10/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
LA ++ G G+LG G + P+ + + + L VV AG H+ +
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 336 GCGESASLGHNAIAD 350
G G LGH+++ D
Sbjct: 267 GAGSCGQLGHDSMND 281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 120 bits (302), Expect = 8e-25, Method: Composition-based stats.
Identities = 94/331 (28%), Positives = 153/331 (46%), Gaps = 30/331 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 102
Q AG HS+AV S G Y++G N G+LG GT+ ++ P +P + +Q +A
Sbjct: 739 QVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSA 798
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNF 159
G ++ + G YA+G ++ G+ G T TS ++ + + + VQ + G F
Sbjct: 799 GYHHSLALGSDGNAYAWGYNNSGQLGDGTS-TDRATSVRVKKPAGTSTDFTYVQVSAGAF 857
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLA 216
+ L +G Y + N +LG T + P + GT + QI AGY + LA
Sbjct: 858 HSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLA 917
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR----TDEKHPRLIEQFQLLN-----LQPVVVAAG 267
+ S Y+ G G+LG+ S+ + +P + N L+ V V AG
Sbjct: 918 VG---SDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAG 974
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-------ALNDVKAIHVATGD 320
WH+ +G DG WG+ G LG+ + + +VP +V +KA+ V+TG
Sbjct: 975 FWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQ 1034
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
Y + + DG+ Y++G LG+N+I G
Sbjct: 1035 YHSLALGSDGNAYAWGDNGYGQLGNNSIPTG 1065
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 32/334 (9%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-----------IIQAA 101
G S+AV S G Y++G N G+LG GTT E R P+ Q R +Q +
Sbjct: 682 GFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVS 741
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNF 159
AG+ ++ + G YA+G++ G G + V + + + VQ + G
Sbjct: 742 AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYH 801
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ L +G Y + + N +LG T + V GT + VQ++AG + LA
Sbjct: 802 HSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLA 861
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWHAAVV 274
L S Y+ G G+LG G+ TD P + + + AG H+ V
Sbjct: 862 LG---SDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAV 918
Query: 275 GQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALN---------DVKAIHVATGDYTT 323
G DG WG+ G LG+ ++ P V+ N +KA++V G + +
Sbjct: 919 GSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHS 978
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ DG+ Y++G + LG+N+ D V L+
Sbjct: 979 LALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLV 1012
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIR---------SLQG 94
+Q AG HS+AV S G Y++G N SGQLG+ + + P P+R + +G
Sbjct: 906 AQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKG 965
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLK 147
++ + AG ++ + G YA+G +S G + G +K T P LV ++ K
Sbjct: 966 LKAVNVTAGFWHSLALGSDGNAYAWGFNSNG--QLGNNSSKDSTVPVLVSDSASPTDTSK 1023
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP 187
+ V + G + + L +G Y +WG++ +LG+++ P
Sbjct: 1024 GLKAVLVSTGQYHSLALGSDGNAY--AWGDNGYGQLGNNSIP 1063
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3871 EALATLRPIQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3930
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3931 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3988
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3989 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDIACGSGDAQ 4047
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4048 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4104
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4105 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4164
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4165 GDNDEGQLGDGTTNAIQRPRLVAAL 4189
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R IQ G ++ G++YA G
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3903 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3960
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3961 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4016
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4017 SDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4076
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4077 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4122
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3937 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3996
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE L+ VV A G+ T L+ +
Sbjct: 3997 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEVLQGHRVVDIACGSGDAQTLCLTDD 4054
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4055 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4110
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4111 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4168
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4169 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4208
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTLPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ + V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--IKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+ +G KD G G++G+K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 2961 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ RLG V + L + V ++A A A G V+S G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGE 3074
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLGH SR + PRLIE + ++ + A G+ H+A + G + TWG G YG L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRL 3132
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
GHG+ + PK+V+ L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3188
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G LG G E ++P+ ++ LN + G + +++ G V+++
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 169 RVYTF 173
V+T+
Sbjct: 3226 VVWTW 3230
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 169 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015
Query: 228 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH 3134
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTW 283
V TW
Sbjct: 3226 VVWTW 3230
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + +Q+ G L A+
Sbjct: 3836 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPIQLIGGEQTLFAVT-- 3892
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3893 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3951
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 3952 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4011
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4012 GRLGHSDSED 4021
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4103 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4161
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4218
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4279 GDNDEGQLGDGTTNAIQRPRLVAAL 4303
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4130
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4131 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4111 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4322
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 385 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 433
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 585
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 410 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 459
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 460 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 517
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 518 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 575
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 633
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 634 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2998 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3057
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3058 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3114
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3173
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3229
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3230 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3289
Query: 339 ESASLGH 345
+ G+
Sbjct: 3290 DHGQQGN 3296
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 394 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 439
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 499
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 500 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 556
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH 637
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 622
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2955 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3014
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3015 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3073
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3074 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3129
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3130 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3187
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3188 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3244
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3118
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3119 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3176
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3177 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3228
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3229 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3285
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3322
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 625
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 681 ------SNDQCQ 686
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 532 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 591
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 592 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 649
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 650 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 707
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 708 HIVGIACG 715
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3207 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3261
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3262 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3319
Query: 155 AIGN 158
A G+
Sbjct: 3320 ACGS 3323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 425 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 484
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 485 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3270 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3327
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3676 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3735
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3736 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3793
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3794 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3852
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3853 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3909
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3910 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3969
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3970 GDNDEGQLGDGTTNAIQRPRLVAAL 3994
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3708 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3765
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3766 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3821
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3822 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3881
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3882 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3927
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3742 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3801
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3802 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3859
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3860 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3915
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3916 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3973
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 3974 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4013
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2689 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2748
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2749 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2805
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2806 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2864
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2865 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2920
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2921 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2980
Query: 339 ESASLGH 345
+ G+
Sbjct: 2981 DHGQQGN 2987
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2646 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2705
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2706 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2764
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2765 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2820
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2821 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2878
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2879 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2935
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2809
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2810 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2867
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2868 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2919
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2920 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 2976
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3013
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 22/200 (11%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 442
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ YL ALA + VYS GCG GG+LGHG + P++I
Sbjct: 443 QGLASRNIVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 498
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 558
Query: 312 KAIHVA--TGDYTTFVVSED 329
K I VA +GD T V+E+
Sbjct: 559 KVIDVACGSGDAQTLAVTEN 578
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3699
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3700 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3759
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3760 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3875
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2898 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2952
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2953 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3010
Query: 155 AIGN 158
A G+
Sbjct: 3011 ACGS 3014
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 24/193 (12%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 448
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 449 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 508
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 509 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 565
Query: 265 AAGAWHAAVVGQD 277
+G V ++
Sbjct: 566 GSGDAQTLAVTEN 578
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 434 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 493
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 494 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 552
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGS 567
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G
Sbjct: 514 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 568
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2961 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3018
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 4011 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4070
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4071 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4128
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4129 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4187
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4188 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4244
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4245 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4304
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4305 GDNDEGQLGDGTTNAIQRPRLVAAL 4329
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4043 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4100
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4101 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4156
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4157 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4216
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4217 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4262
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4077 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4136
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4137 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4194
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4195 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4250
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4251 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4308
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4309 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4348
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4034
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4035 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4094
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4095 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4210
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3727 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3786
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3787 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3844
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3845 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3903
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3904 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3960
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3961 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4020
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4021 GDNDEGQLGDGTTNAIQRPRLVAAL 4045
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3793 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3852
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3853 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3910
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3911 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3966
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3967 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4024
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4025 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4064
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3759 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3816
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3817 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3872
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3873 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3932
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3933 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3980
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 12/260 (4%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G V+S+G G+LGH + PR I +L+ RI A G+ + ++ +G++Y +G
Sbjct: 2819 GKVFSWGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 2874
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDA 179
+G +G T+L P++V+ L V+Q A G + T L+ EG V++ G+
Sbjct: 2875 GEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLW 2932
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
++G E + L V QI G + LAL SG+ V++ G G +LGH
Sbjct: 2933 KIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT--KSGV-VWTWGKGDYFRLGH 2989
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
GS + P+++E + + +GA H V G+V WG +G G+G
Sbjct: 2990 GSDVHVRKPQVVEGLRGKKIV-ACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVN 3048
Query: 300 SVPKVVQALNDVKAIHVATG 319
P +VQ L K VA G
Sbjct: 3049 RKPTLVQGLEGQKITRVACG 3068
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+++G KD G G++ K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 2711 KVFSWGLNDKDQLG----GLKNKK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2765
Query: 172 TF-------SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+WG G T P PH + L + VV+ A + P
Sbjct: 2766 ACGEATKWPAWGLGISSG--TVPI---PHGXITALSSY-VVKKVAVHSGTSQTGFXPVDG 2819
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLGH SR PRLIE + ++ + A G+ H+A + G + TWG
Sbjct: 2820 KVFSWGEGDDGKLGHFSRM----PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWG 2873
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESAS 342
G YG LGHG+ + PK+V+ L + I VA G D T ++++G V+S G G+
Sbjct: 2874 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWK 2933
Query: 343 LG 344
+G
Sbjct: 2934 IG 2935
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 2856 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2915
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V++ G + G + K PQ +E L V Q G F+ L++ G
Sbjct: 2916 ALTDEGLVFSLGDGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY--LLALACQPSGMAV 226
V+T+ G+ RLGH ++ + +P +E + +I A C L LA SG V
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVHVRKPQ----VVEGLRGKKIVACSCSGALHCLAVTDSGQ-V 3029
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
Y+ G G+ G+G+ T + P L++ +
Sbjct: 3030 YAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3058
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 59/347 (17%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+S+G N QLG ++ P +L + ++Q A G+ ++
Sbjct: 2701 GLESAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2760
Query: 113 AGQVYAFGKDS------------------------------------------------- 123
G+VYA G+ +
Sbjct: 2761 EGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGK 2820
Query: 124 ---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+GE + G G P+L+E+LK + A G+ +A L+ G +YT+ G R
Sbjct: 2821 VFSWGEGDDGKLG-HFSRMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2879
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH ++P ++ L V+Q+A G LA G+ V+S+G G K+G G
Sbjct: 2880 LGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALTDEGL-VFSLGDGDLWKIGPG 2937
Query: 241 SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
K + + + LN Q V + GA + + + G V TWG G Y LGHG++
Sbjct: 2938 PEV--KGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV 2995
Query: 300 SVPKVVQALNDVKAIHVA-TGDYTTFVVSEDGDVYSFGCGESASLGH 345
P+VV+ L K + + +G V++ G VY++G + G+
Sbjct: 2996 RKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGN 3042
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3750
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3751 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3810
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3811 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3926
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2952 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3006
Query: 95 IRIIQ-AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
+I+ + +GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3007 KKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITR 3064
Query: 154 AAIGN 158
A G+
Sbjct: 3065 VACGS 3069
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3015 SGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3073
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 15/304 (4%)
Query: 26 SWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR 85
S +LV + A R N G H A++ G +Y+FG NS GQLGHG+T
Sbjct: 86 SLRLVPALVTEDIAHIRSAN-----GCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITT 140
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P I+ L +++ A T++++ G +YAFG++ G + G+ P +
Sbjct: 141 PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLG--QLGIDDGMDRHVPVPLTY 198
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPV 204
+ V+ A G T V G V F + +LG +T P L L+++ V
Sbjct: 199 FNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVV 258
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+A GY + +ALA S VYS G G+LGHG R P LI+ L V V
Sbjct: 259 PSLACGYYHTIALAEHGS---VYSFGRNDYGQLGHGHRHHLSEPTLIK--ALAKTHAVQV 313
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTT 323
G +H V+ +DG+V +G +G LG GN +C S P+++ +L D + VA+G Y +
Sbjct: 314 TCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTS-PQIIASLRDKFVVKVASGFYHS 372
Query: 324 FVVS 327
++
Sbjct: 373 ICLT 376
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
G V++ G N SGQ G G+T + R P + I I++A G IS +G +Y F
Sbjct: 63 GDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTF 122
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
G +S G+ +G T +T+P ++ L + VV+ A F T V++ EG +Y F +
Sbjct: 123 GFNSRGQLGHG--STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLG 180
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LG + P PL + PV+ +A G + + + V + G G+LG
Sbjct: 181 QLGIDDGMDRHVPVPLT-YFNSRPVLAVACGQHHTVV---SLTNGGVVAFGKNDHGQLGT 236
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D + L +L +A G +H + + G V ++G YG LGHG+
Sbjct: 237 GYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHL 296
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
S P +++AL A+ V G Y T V+SEDG VY FG LG + D
Sbjct: 297 SEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLID 347
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+IA+ G VYSFG N GQLGHG P I++L +Q G T+++S+
Sbjct: 267 HTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSED 326
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY FG+++ G+ G+ TSPQ++ SL++ FVV+ A G + + L+
Sbjct: 327 GKVYPFGRNNHGQ--LGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLTATKN---- 380
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPV----------VQIAAGYCYLLALACQPSG 223
S G+ HT D LG L N P+ VQI A C ++A C+P
Sbjct: 381 SVGSRMDTS-HTLCQD------LGKLVNNPMRSDLVFVLSGVQIHAHSCVVMA-RCEPLE 432
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHP 248
LGG++ GS ++ P
Sbjct: 433 KM-------LGGRMIEGSLSEINIP 450
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4025 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4083 KLGHGNRSPCDRPR-VIESLRGTEVVDIAAGGAHS---ACITAAGELYTWGKGRYGRLGH 4138
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4139 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4198
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L V V G + +++ G VY++G G+ LGH
Sbjct: 4199 KVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4244
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4059 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSAC 4118
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG++Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4119 ITAAGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4176
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V ++ G + +AL SG AVY
Sbjct: 4177 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVTKVECGSQFSVALT--KSG-AVY 4232
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4233 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4291 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3993 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4052
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ VV A
Sbjct: 4053 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDIA 4110
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4111 AGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4169
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L + V G+ + +
Sbjct: 4170 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGVGVTKVECGSQFSVALT 4226
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4227 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4286
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4287 GDNDEGQLGDGTTNAIQRPRLVAAL 4311
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E+L N+ V Q A +LSR G++YT ++ N N + P L+
Sbjct: 439 VSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN----------NTLGPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G YL A ++S GCG GG+LGHG + P+L+
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATS----ELFSWGCGDGGRLGHGDTVSLEEPKLVSA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ Q + +A G+ ++A + DG + TWG G YG LGHG+ E ++VP +V L +
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K + V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGR 639
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + +S +++++G G +G T + P+LV
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHG--DTVSLEEPKLV 541
Query: 144 ESLKNIF----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+L V+ A G+ ++A ++ +G +YT+ GN RLGH + + P + G L
Sbjct: 542 SALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTG-L 600
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + VV ++ G L+ +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 601 KGLKVVDVSCGSGDAQTLSVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 659
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK++ L K + VA G
Sbjct: 660 --VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVG 717
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++E G+VYS+G +
Sbjct: 718 STHCLALTESGEVYSWGSND 737
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+ +G KD G G++G+K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 2964 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3018
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ RLG V + L N V ++A A A G V+S G
Sbjct: 3019 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDG-KVFSWGE 3077
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLGH SR + PRLIE + ++ + A G+ H+A + G + TWG G YG L
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAAITSSGELYTWGLGEYGRL 3135
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
GHG+ + PK+V+ L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 108/170 (63%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T+ G +Y++G + G+LGHG++E++ P + L+G++++ + G+G +T+
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ ++++G
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P ++ L+ VV +A G + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-IMNGLQGKKVVDVAVGSTHCLALT 725
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 24/267 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
P +L + + Q A +++S G++Y A+ ++ G PQLV
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLG--------------PQLV 487
Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
+ L +NI + A LS ++++ G+ RLGH + EP L G
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGK 547
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
V+ IA G Y A+ +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 548 QTGKQVIHIACGSTYSAAITADGE---LYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLK 604
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 664
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VYS+G G++ LGH
Sbjct: 665 GSQFSIAITKDGQVYSWGKGDNQRLGH 691
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 11/281 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 3020 CGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3078
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G G G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGR 3134
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
E ++P+ ++ LN + G + +++ G V+++
Sbjct: 3193 GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAAGAGRTML 109
H +A+++ ++S+G G+LGHG T P+ + +L G ++I A G+ +
Sbjct: 506 HYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS--RE 167
I+ G++Y +G+ ++G +G + V P LV LK + VV + G+ LS
Sbjct: 566 ITADGELYTWGRGNYGRLGHGSSEDQTV--PMLVTGLKGLKVVDVSCGSGDAQTLSVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +A+ VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIAIT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+++ Q + V VA G+ H + + G V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKIMNGLQ--GKKVVDVAVGSTHCLALTESGEVYSWG--- 734
Query: 288 YGCLGHGNEECE---------SVPKVVQALNDVKAIHVATGDYTTF 324
N++C+ VP V+ L+ + ++ G +F
Sbjct: 735 ------SNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSF 774
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSG 3228
Query: 169 RVYTF 173
V+T+
Sbjct: 3229 VVWTW 3233
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT++G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2997 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3114 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQAVCQIECGAQFSLALTKSG 3228
Query: 279 RVCTWGWGRYGCLG 292
V TW ++ CL
Sbjct: 3229 VVWTWXXTKH-CLA 3241
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
FV + G TA + R F WG ND + + ++ TL + VVQ+A
Sbjct: 2947 FVRKKTAGLESTATI----RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAG 267
G L A+ + VY+ G G+LG G S PR I ++ V V +G
Sbjct: 3003 GGSKSLFAVTAEGK---VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
HA + DG+V +WG G G LGH + P++++AL + +A G + ++
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 328 EDGDVYSFGCGESASLGH 345
G++Y++G GE LGH
Sbjct: 3120 SSGELYTWGLGEYGRLGH 3137
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G +++VT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 612 SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ GQVY++GK +G + + V P+++ L+ VV A+G+ L+ G
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTE--EHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGE 729
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
VY SWG++ + H +P P +L L++ +V I+ G
Sbjct: 730 VY--SWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4016
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4017 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4076
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + + V +AAG H+A + G + TWG GRYG
Sbjct: 4077 GEAEDGKLGHGNRSPCDRPRVIESLR--GTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4135 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4192
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+L++ N+ + H + + +WG G G LGHG+ PK+V A
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSA 543
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L+ + IH+A G + ++ DG++Y++G G LGH + D V L+
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLV 597
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4215
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLVAAL 4300
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4235
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 661 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS--------SCS 781
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G +CS+ F
Sbjct: 782 E-WSIGLRVPFVVDICSMTF 800
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L++
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4213
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLVAAL 4298
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4012 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4070 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4125
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4126 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4219
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3171
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3224 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3280
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4064 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 424
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ +GQ++ FG +FG +G + K V+ P+ +ESLK + VQAA G + TA +
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 482
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + + P ++ TL+ Q+A G+ +
Sbjct: 483 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVV-TLDEPNFCQVACGHSMTV 541
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL+ VY++G + G LG+ ++ D K P +E +L +A GA+H AV+
Sbjct: 542 ALS---RLGHVYTMGSCVYGHLGN-TQADGKLPTPVEG-KLSKSFVEEIACGAYHVAVLT 596
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G GCLGHG+ + P +V+AL D + +A G T +
Sbjct: 597 SRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 647
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G +++ G+V+++G +S G +GV V P+L+ES
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSD--VPHPKLIES 353
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N + A G + T ++ G +YT+ G N LGH + + P + G LE I
Sbjct: 354 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIH 413
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG R PR IE L L+ V
Sbjct: 414 VSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRKSVSLPREIE--SLKGLRTVQ 468
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG++E + VP V L++
Sbjct: 469 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP 528
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VA G T +S G VY+ G LG N ADG++
Sbjct: 529 NFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG-NTQADGKL 569
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR I SL+G+R +QAA G T +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 479
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + +KLV P V +L Q A G+
Sbjct: 480 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTRVVTLDEPNFCQVACGH 537
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T LSR G VYT LG +T+ + P P+ G L V +IA G ++ L
Sbjct: 538 SMTVALSRLGHVYTMGSCVYGHLG-NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLT 596
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S V++ G G G LGHG D P L+E + ++ + AA H V
Sbjct: 597 ---SRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 653
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 654 SGVDQSMCS 662
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 184
+ +GV+ L+ P+ +ES + V A G A+++++G V FSWG ++ RLGH
Sbjct: 285 SNFGVKMDSLL--PKALESAVVLDVQNIACGGEHAAMVTKQGEV--FSWGGESGGRLGHG 340
Query: 185 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ +DV PHP L+ +L N + +A G + A+ + + G G LGHG++
Sbjct: 341 VD-SDV-PHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTWGDGTYNYGLLGHGNQV 397
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+
Sbjct: 398 SHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPR 456
Query: 304 VVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
+++L ++ + A G + T V E G ++++G G+ LGH
Sbjct: 457 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 510
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3984 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFI 4043
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P++VESL+ I VV A
Sbjct: 4044 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDVA 4101
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4160
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4161 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4217
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4218 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4277
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4278 GDNDEGQLGDGTTNAIQRPRLVAAL 4302
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4016 GA--GGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4074 KLGHGNRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4129
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4130 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4190 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4237
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR + SL+GI ++ AAG +
Sbjct: 4050 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSAC 4109
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4110 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4167
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4168 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4223
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4224 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4282 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L II+ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++V P L+ L
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIP-VLVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 661 --VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S +G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LASLGVTQIACAEKRFLILSRSGRVYTQAYNSDAL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V Q A +LSR GRVYT ++ +DA + P L+
Sbjct: 440 VIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDA----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +++IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E +P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2995 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3054
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3055 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3111
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3112 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3170
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3171 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3226
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3227 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3286
Query: 339 ESASLGH 345
+ G+
Sbjct: 3287 DHGQQGN 3293
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 11/299 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2952 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3011
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3012 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3070
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3071 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3126
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3127 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3184
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3185 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3243
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3115
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3116 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3173
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3174 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3225
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3226 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3282
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3283 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3319
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G +++ P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEVI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS--------SCS 781
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G +CS+ F
Sbjct: 782 E-WSIGLRVPFVVDICSMTF 800
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S V+ L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3204 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3258
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3259 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3316
Query: 155 AIGN 158
A G+
Sbjct: 3317 ACGS 3320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4005
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4006 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEV 4064
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+VV++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4065 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4125 GRLGHSDSED 4134
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3267 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3324
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3925 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3984
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3985 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4042
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4101
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4102 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4158
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4159 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4219 GDNDEGQLGDGTTNAIQRPRLVAAL 4243
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3957 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4015 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4070
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4071 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4130
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4131 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4178
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3991 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4050
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4051 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4108
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4109 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4164
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4165 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4223 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2937 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2996
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2997 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3053
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3054 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3112
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3113 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3168
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3228
Query: 339 ESASLGH 345
+ G+
Sbjct: 3229 DHGQQGN 3235
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 385 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 433
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 585
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 394 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 439
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 499
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 500 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 556
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 557 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 616
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH 637
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 487
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 488 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 546
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 547 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 605
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 606 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 663
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 664 STHCLALTEDSEVHSWGSND 683
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 622
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2893 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2952
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 2953 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3011
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3012 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3067
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3125
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3126 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3185
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3057
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3058 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3115
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3116 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3167
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3168 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3224
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3261
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 625
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 681 ------SNDQCQ 686
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 532 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 591
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 592 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 649
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 650 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTK 707
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 708 HIVGIACG 715
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3948
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3949 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4008
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4009 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4124
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3146 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3200
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3201 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3258
Query: 155 AIGN 158
A G+
Sbjct: 3259 ACGS 3262
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 425 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 484
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 485 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3209 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3266
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P +L +R +Q G + ++ G+VYA
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA--T 4025
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
G+ GT + +P L+ES+++IF+ + A+ G LS +G+VY++ G+D
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDG 4085
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + N + L+ L+ +V IA G + A+ +G +Y+ G G G+LGH
Sbjct: 4086 KLGHGNK-NGCDHPQLIDALQGKEIVDIACGGAHSAAVT---AGGEIYTWGKGRYGRLGH 4141
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E + + +G + D V +WG G YG LG G +
Sbjct: 4142 GDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4201
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P +++L + + V G + ++ G VY++G G+ LGH
Sbjct: 4202 KIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4247
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A A HS+A++ G VYS+G+ G+LGHG +P I L G +I + GA +
Sbjct: 526 AHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYS 585
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ +G+VY +G+ ++G +G V P LV LK+ F+V A G+ L+
Sbjct: 586 AAVTSSGEVYTWGRGNYGRLGHGTSEDHTV--PTLVVGLKDYFIVDIACGSGDAQTLAVT 643
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAV 226
FSWG+ T +D P L +E + +++A YC +LA SG +V
Sbjct: 644 NTGLVFSWGDGGYGKLGTGGSDGSKTPKL--IEKLQDIEVARVYCGSQFSLALTKSG-SV 700
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHGS + P+L+E ++ V V +G H + DG V WG
Sbjct: 701 YTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRN 758
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G +G +E S P ++ L + + G
Sbjct: 759 DNGQVGETSETNVSEPTLLTLLQGKNIVDIDCG 791
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G +AVTS G VY+ G + G+LG G T+ P + S+Q I I + A +G
Sbjct: 4005 QLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGG 4064
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + PQL+++L+ +V A G +A +
Sbjct: 4065 KHCLALSTDGKVYSWGEGDDGKLGHGNKNG--CDHPQLIDALQGKEIVDIACGGAHSAAV 4122
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ TL V+ IA G L C
Sbjct: 4123 TAGGEIYTWGKGRYGRLGHGDSEDQMKPK-LVETLIGFKVIDIACGSGDAQTL-CITDDD 4180
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L V V G+ + + + G V TWG
Sbjct: 4181 NVWSWGDGDYGKLGRGGSDGCKIPMKIES--LAGLGVVKVECGSQFSVALTRSGSVYTWG 4238
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG++E PK + AL K I +ATG S+ G+V+++G + LG
Sbjct: 4239 KGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG 4298
Query: 345 H---NAI 348
NAI
Sbjct: 4299 DGTMNAI 4305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 9/313 (2%)
Query: 49 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG S+ + S G +Y+ G ++G+LG G + P + SL I+ + +G
Sbjct: 3023 IAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGK 3082
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ G + P+++E+LK+ + A G+ +A +S
Sbjct: 3083 HAMALTLDGKVFSWGEGEDGK--LGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAIS 3140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G ++T+ G RLGH + P L+ L +VQ+A G LA G+
Sbjct: 3141 STGELFTWGLGEYGRLGHGDNLTQLRPK-LVKALLGHHIVQVACGSRDAQTLALSAEGL- 3198
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ L + ++ GA + + + G+V TWG
Sbjct: 3199 VFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGV--CMIECGAQFSLALTKFGQVYTWGK 3256
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHG+++ P +V++L++ K +HVA G ++ G VY++G + G+
Sbjct: 3257 GDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316
Query: 346 NAIADGQVCSLLF 358
I + SL+
Sbjct: 3317 GTILVNRKPSLVL 3329
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 12/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH RP+ I +L+ RI A G+ +
Sbjct: 3079 SGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAA 3138
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G+++ +G +G +G T+L P+LV++L +VQ A G + T LS E
Sbjct: 3139 ISSTGELFTWGLGEYGRLGHGDNLTQL--RPKLVKALLGHHIVQVACGSRDAQTLALSAE 3196
Query: 168 GRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G V+++ G+ +LG +E D+ PH + L + V I G + LAL V
Sbjct: 3197 GLVFSWGDGDFGKLGRGGSEGCDI-PHNI-ERLNGLGVCMIECGAQFSLALT---KFGQV 3251
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHGS + P L+E L + V VA GA H G+V WG
Sbjct: 3252 YTWGKGDYFRLGHGSDQHVRKPTLVES--LSEKKIVHVAVGALHCLCATDQGQVYAWGDN 3309
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L V+ VA G
Sbjct: 3310 DHGQQGNGTILVNRKPSLVLNLEGVRVNRVACG 3342
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 143/309 (46%), Gaps = 10/309 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+++ G VYS+G G+LGHG P+ I +LQG I+ A G +
Sbjct: 4062 SGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAA 4121
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ G++Y +GK +G +G ++ P+LVE+L V+ A G+ T ++ +
Sbjct: 4122 VTAGGEIYTWGKGRYGRLGHGDSEDQM--KPKLVETLIGFKVIDIACGSGDAQTLCITDD 4179
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG +VY
Sbjct: 4180 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVVKVECGSQFSVALT--RSG-SVY 4235
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS +HP+ I Q + + +A G+ H G V TWG
Sbjct: 4236 TWGKGDYHRLGHGSDEHVRHPKKIAALQ--GKKIICIATGSLHCVACSDLGEVFTWGDND 4293
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G P++V L VA G + S + + A + ++
Sbjct: 4294 EGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSATHLPVDAPMEYDL 4353
Query: 348 IADGQVCSL 356
+ D + +L
Sbjct: 4354 VRDISLPTL 4362
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 8/276 (2%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P I G I + AA A ++ +S G VY++G G +G ++ P +
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKI 567
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
L V+ + G ++A ++ G VYT+ GN RLGH T + P ++G L++
Sbjct: 568 TELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVG-LKDYF 626
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+V IA G LA +G+ V+S G G GKLG G K P+LIE+ Q +++
Sbjct: 627 IVDIACGSGDAQTLAVTNTGL-VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQ--DIEVAR 683
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V G+ + + + G V TWG G LGHG+E PK+V+ LN VA G
Sbjct: 684 VYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHV 743
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
+++DG+VY +G ++ +G + + +LL L
Sbjct: 744 LALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTL 779
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 12/286 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P SL ++ I A G+ ++S G++YA G+ +
Sbjct: 2987 VFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGT 3046
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ + V +P + SL + + A+ G L+ +G+V+++ G D +L
Sbjct: 3047 NGR--LGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3104
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + P ++ L++ + IA G + A++ S +++ G G G+LGHG
Sbjct: 3105 GHDNRLSLDRPK-MIEALKSKRIRDIACGSSHSAAIS---STGELFTWGLGEYGRLGHGD 3160
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
+ P+L++ LL V VA G+ A + +G V +WG G +G LG G E
Sbjct: 3161 NLTQLRPKLVK--ALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGC 3218
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P ++ LN + + G + +++ G VY++G G+ LGH
Sbjct: 3219 DIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH 3264
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 16/255 (6%)
Query: 22 KCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
K G +L L EA + G HS A++S G ++++G G+LGHG
Sbjct: 3103 KLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNL 3162
Query: 82 EEWRPRPIRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
+ RP+ +++L G I+Q A G+ +T+ +S G V+++G FG+ G G++
Sbjct: 3163 TQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG--GSEGCDI 3220
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P +E L + V G F+ L++ G+VYT+ G+ RLGH ++ + +P L+ +L
Sbjct: 3221 PHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKP-TLVESL 3279
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+V +A G + L C VY+ G G+ G+G+ + P L+ LNL
Sbjct: 3280 SEKKIVHVAVGALHCL---CATDQGQVYAWGDNDHGQQGNGTILVNRKPSLV-----LNL 3331
Query: 260 QPV---VVAAGAWHA 271
+ V VA G+ H+
Sbjct: 3332 EGVRVNRVACGSSHS 3346
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
TSPQ +S++ + V Q + +L+ G+VY + ++ + E D
Sbjct: 466 TSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQCPEQIEGFDG------- 518
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
+ I + A + LAL+C VYS G G GG+LGHG P I +L+
Sbjct: 519 --KEISKLAAHADGKHSLALSCDGD---VYSWGNGDGGRLGHGDNNSRDQPTKIT--ELV 571
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ ++ GA ++A V G V TWG G YG LGHG E +VP +V L D + +A
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIA 631
Query: 318 --TGDYTTFVVSEDGDVYSFG 336
+GD T V+ G V+S+G
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWG 652
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 101/244 (41%), Gaps = 65/244 (26%)
Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE-PHPLLGT----LENIPVVQIAAGYCY 213
L+R+ +T +WG + H + VE P + T L + VQ+ G
Sbjct: 3953 LNRKPEDWTLTWGGSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQT 4012
Query: 214 LLALACQ------------------------PSGMA------VYSVGCGLGGK------- 236
LLA+ P+ + + V GGK
Sbjct: 4013 LLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALST 4072
Query: 237 --------------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
LGHG++ HP+LI+ Q + V +A G H+A V G + T
Sbjct: 4073 DGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQ--GKEIVDIACGGAHSAAVTAGGEIYT 4130
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGES 340
WG GRYG LGHG+ E + PK+V+ L K I +A +GD T +++D +V+S+G G+
Sbjct: 4131 WGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDY 4190
Query: 341 ASLG 344
LG
Sbjct: 4191 GKLG 4194
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E ++ G S+A+T G VY++G + +LGHG+ P+ + L G I + A G
Sbjct: 680 EVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVG 739
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+G + ++D G+VY +G++ G+ G V+ P L+ L+ +V G
Sbjct: 740 SGHVLALTDDGEVYGWGRNDNGQV--GETSETNVSEPTLLTLLQGKNIVDIDCG 791
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ ++ G H + T +G VY++G N GQ G+GT +P + +L+G+R+
Sbjct: 3277 ESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRV 3336
Query: 98 IQAAAGAGRTM 108
+ A G+ ++
Sbjct: 3337 NRVACGSSHSI 3347
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+V WG LG VP ++L +K IH+A G + F+VS DG +Y+ G G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045
Query: 339 ESASLG----HNAIADGQVCSL 356
+ LG +N Q+ SL
Sbjct: 3046 TNGRLGLGHSNNVATPCQLTSL 3067
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G GH +A+T G VY +G N +GQ+G + P + LQG I+ G +++
Sbjct: 739 GSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3920 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFI 3979
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 3980 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGVEVVDVA 4037
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4038 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4096
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4097 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4153
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4154 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4213
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4214 GDNDEGQLGDGTTNAIQRPRLVAAL 4238
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V+SP L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3952 GA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4009
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L + VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4010 KLGHGSRSPCDRPR-VIESLRGVEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4065
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4066 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4125
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4126 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4171
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG+ RPR I SL+G+ ++ AAG +
Sbjct: 3986 SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSAC 4045
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4046 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4103
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4104 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4159
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4160 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4217
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4218 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2933 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAV 2992
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2993 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3049
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3050 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3108
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3109 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 3164
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3165 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3224
Query: 339 ESASLGH 345
+ G+
Sbjct: 3225 DHGQQGN 3231
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2896 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2955
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 2956 CGEATNGRLGLGI-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 3015 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3070
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3071 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E +VP+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3129 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3179
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3053
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3054 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3111
Query: 168 GRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3112 GLVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3163
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3164 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3220
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3257
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 395 LILSRNGCVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 444
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 445 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 502
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RL H + E ++ L+ + + G + LA +G V+S
Sbjct: 503 LYTWGRGNYXRLDHGRSAMN-EILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQ-VWSW 560
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 561 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 618
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 619 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 668
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR G VYT ++ +D + P L+
Sbjct: 370 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDT----------LAPQ-LV 418
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 419 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 474
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G Y L HG + ++ L+
Sbjct: 475 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQ 534
Query: 312 KAIHVATGDY--TTFVVSEDGDVYSFGCGESASLGH 345
K I+ + G T E+G V+S+G G+ LG
Sbjct: 535 KFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGR 570
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 28/263 (10%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G VY A+ D+ +PQLV+ L +
Sbjct: 379 LANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTL--------------APQLVQGLASR 424
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 425 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 484
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G +L HG + LI L + +
Sbjct: 485 VHIACGSTYSAAITAEGE---LYTWGRGNYXRLDHGRSA--MNEILIMISGLDRQKFIYK 539
Query: 265 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ G A + ++G+V +WG G YG LG G + PK+++ L D+ + V G
Sbjct: 540 SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 599
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
+ +++DG VYS+G G++ LGH
Sbjct: 600 SIALTKDGQVYSWGKGDNQRLGH 622
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G +S A+T++G +Y++G + +L HG + I L + I + G +T+
Sbjct: 490 GSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTL 549
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 550 AFYENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 607
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 608 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 655
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3943
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3944 GKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4003
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHGSR+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4004 GEAEDGKLGHGSRSPCDRPRVIESLR--GVEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4061
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4062 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4119
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3142 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3196
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3197 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3254
Query: 155 AIGN 158
A G+
Sbjct: 3255 ACGS 3258
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
++A G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++ ++
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 605
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ + V+
Sbjct: 606 DGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH- 662
Query: 173 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
SWG++ + H +P P L L+ +V IA G
Sbjct: 663 -SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G SIA+T G VYS+G + +LGHGT E P+ + LQG ++I AAG+ + +
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655
Query: 111 SDAGQVYAFGKDS 123
++ +V+++G +
Sbjct: 656 TEDSEVHSWGSND 668
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3205 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3262
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 4048 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4107
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4165
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4166 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4224
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4225 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4281
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4282 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4341
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4342 GDNDEGQLGDGTTNAIQRPRLVAAL 4366
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4080 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4137
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4138 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4193
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4194 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4253
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4301
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4114 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4173
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4174 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4231
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4232 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4287
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4288 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4345
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4346 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 3060 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3119
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3120 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3176
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3177 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3235
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3236 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3291
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3292 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3351
Query: 339 ESASLGH 345
+ G+
Sbjct: 3352 DHGQQGN 3358
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 508 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 556
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 557 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 612
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 613 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 672
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 673 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 708
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 517 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 562
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 563 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 622
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 623 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 679
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 680 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 739
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 740 ALTKDGQVYSWGKGDNQRLGH 760
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 553 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 610
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 611 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 669
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 670 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 728
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 729 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 786
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 787 STHCLALTEDSEVHSWGSND 806
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 687
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 688 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 745
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 746 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 793
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 3016 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3075
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3076 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3134
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3135 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3190
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3191 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3248
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3249 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3308
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3180
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3181 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3238
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3239 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3290
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3291 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3347
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3384
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 635 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 692
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 693 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 748
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 749 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 803
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 804 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS--------SCS 849
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G +CS+ F
Sbjct: 850 E-WSIGLRVPFVVDICSMTF 868
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 655 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 714
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 715 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 772
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L++
Sbjct: 773 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSK 830
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 831 HIVGIACG 838
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4071
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4072 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4131
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4132 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4247
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3269 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3323
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3324 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3381
Query: 155 AIGN 158
A G+
Sbjct: 3382 ACGS 3385
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3332 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3389
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3987 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4046
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4047 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4104
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4105 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4163
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4164 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4220
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4221 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4280
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4281 GDNDEGQLGDGTTNAIQRPRLVAAL 4305
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4019 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4076
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4077 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4132
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4133 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4192
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4193 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4240
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4053 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4112
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4113 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4170
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4171 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4226
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4227 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4284
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4285 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4324
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2999 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3058
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3059 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3115
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3116 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3174
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3175 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3230
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3231 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3290
Query: 339 ESASLGH 345
+ G+
Sbjct: 3291 DHGQQGN 3297
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 445 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 493
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 494 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 549
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 550 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 609
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 610 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 645
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 454 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 499
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 500 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 559
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 560 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 616
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 617 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 676
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 677 ALTKDGQVYSWGKGDNQRLGH 697
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 490 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 547
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 548 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 606
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 607 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 665
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 666 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 723
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 724 STHCLALTEDSEVHSWGSND 743
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 624
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 625 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 682
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 683 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 730
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2955 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3014
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3015 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3073
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3074 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3129
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3130 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3187
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3188 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3247
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3119
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3120 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3177
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3178 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3229
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3230 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3286
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3323
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 629
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 630 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 685
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 686 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 740
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 741 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS--------SCS 786
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G +CS+ F
Sbjct: 787 E-WSIGLRVPFVVDICSMTF 805
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 592 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 651
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 652 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 709
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L++
Sbjct: 710 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSK 767
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 768 HIVGIACG 775
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3952 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4010
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4011 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4070
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4071 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4186
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3208 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3262
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3263 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3320
Query: 155 AIGN 158
A G+
Sbjct: 3321 ACGS 3324
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3271 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3328
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3975 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4034
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4035 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4092
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4093 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4151
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4152 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4208
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4209 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4268
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4269 GDNDEGQLGDGTTNAIQRPRLVAAL 4293
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4007 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4064
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4065 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4120
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4121 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4180
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4181 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4226
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4041 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4100
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4101 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4158
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4159 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4214
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4215 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4272
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4273 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2988 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3047
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3048 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3104
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3105 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3163
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3164 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3219
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3220 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3279
Query: 339 ESASLGH 345
+ G+
Sbjct: 3280 DHGQQGN 3286
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2945 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3004
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3005 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3063
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3064 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3119
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3120 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3177
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3178 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3234
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3109 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3166
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3167 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3218
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3219 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3275
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3312
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 703
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 762 HIVGIACG 769
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3998
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3999 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4058
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4059 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4174
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3197 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3251
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3252 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3309
Query: 155 AIGN 158
A G+
Sbjct: 3310 ACGS 3313
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3260 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3317
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4215
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLVAAL 4300
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4235
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 661 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
V++ED +V+S+G +
Sbjct: 719 STHCLVLTEDSEVHSWGSND 738
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+++LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 109/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + L L
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVLT 726
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + L S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3124
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I++L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H V+ +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ VL+ + V+ SWG++ + H +P P L++
Sbjct: 705 EGLQGKKVIDVAAGSTHCLVLTEDSEVH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 480 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4056 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4115
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4116 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHHVVDVACGSGDAQTLCLTDD 4173
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4174 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4229
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4230 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4287
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4288 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4022 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4079
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4080 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4135
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q ++ V +G + D V +WG G YG LG G +
Sbjct: 4136 SDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4195
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4196 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4241
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3990 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4049
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4050 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4107
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4108 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQ 4166
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4167 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4223
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4224 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4283
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4284 GDNDEGQLGDGTTNAIQRPRLVAAL 4308
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIP-VLVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 3001 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3060
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3061 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3117
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3118 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3176
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3177 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3232
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3233 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3292
Query: 339 ESASLGH 345
+ G+
Sbjct: 3293 DHGQQGN 3299
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2958 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3017
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3018 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3076
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3077 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3132
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3133 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3191 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3247
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3121
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3122 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3179
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3180 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3231
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3232 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3288
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3325
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3210 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3264
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3265 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3322
Query: 155 AIGN 158
A G+
Sbjct: 3323 ACGS 3326
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4011
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4012 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4071 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4130
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4131 GRLGHSDSED 4140
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3273 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3330
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4215
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLVAAL 4300
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 661 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLALT 726
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VY+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 3017 CGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 3076 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3131
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3190 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4066 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 480 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 23/292 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHG W P+ I +L+G+ + + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ GQ++ FG +FG +G + + ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITTMGQLFTFGDGTFGVLGHGNR--ESISCPKEVESLSGLKTISVACGVWHTAAIVEV 254
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V S+G + G+LG+ R+D K P L+E+ N+ V VA G++H AV+
Sbjct: 314 LT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLTI 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
V TWG G G LGHG+ E +P +V+AL D H+A G T + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQ 419
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 131/286 (45%), Gaps = 21/286 (7%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
RP+P+ S + G + L++ G+V+ +G++S G +G + + P+L+E
Sbjct: 67 RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
SL V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V ++ G + + +++ G G G LGHG+R P+ +E L L+ +
Sbjct: 185 AVAYVSCGTWHTALITTMGQ---LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLKTI 239
Query: 263 VVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V S G LG N +DG++ L+
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLG-NPRSDGKIPCLV 344
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + G +A++++ G V+T+ + RLGH + + + HP L
Sbjct: 65 VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
+E++ V + C + +Y+ G G G LGHG P+ I
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V+ G WH A++ G++ T+G G +G LGHGN E S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239
Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGH 345
VA G + T + E G ++++G G+ LGH
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH 281
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
C E S A+AG VYS+G G+LG G ++ + P P+ +L G R+
Sbjct: 69 CGAEYSMAVAG--------GDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASV 120
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G T++ + GQ++AFG++ G+ G+ + PQLV +L+ VV A G
Sbjct: 121 ACGDTHTLVATAEGQLFAFGRNQNGQC--GLGSIQDCLEPQLVTALQGKEVVAVACGAEH 178
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ ++ EG VY + WG +G E D L LE + V Q+ G+ + +A+
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIG-DGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV--- 234
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 279
G A+Y+ G G +L G R D P+ +E +Q V AG W H GR
Sbjct: 235 DEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-----VQQVATVAGGWRHTMAADSQGR 289
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ GW ++G G G+ E + V+AL + + V +G T V+ G +S+G
Sbjct: 290 LFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNV 349
Query: 340 SASLGHNAIAD 350
+ LGH+ + D
Sbjct: 350 NGQLGHSGMQD 360
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R + G H++ T++G +++FG N +GQ G G+ ++ P+ + +LQG ++ A
Sbjct: 115 RRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVAC 174
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
GA +M ++ G+VY +G +G G + + P L + L+ + V Q G +
Sbjct: 175 GAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHL--PTLAKGLEGVKVAQVNCGWRHSI 232
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQP 221
+ G +YT+ WG A+L D + H + +E + V +A G+ + +A Q
Sbjct: 233 AVDEGGAMYTWGWGAYAQLMQ----GDRKDHYVPKRVEAVQQVATVAGGWRHTMAADSQG 288
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRV 280
+++ G G+ G G D ++Q + L + VV W H V G+
Sbjct: 289 R---LFASGWNKFGQCGVGHNEDVVR---VQQVEALAGERVVQVKSGWKHTMAVTHTGKF 342
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALN 309
+WG G LGH + + P + AL+
Sbjct: 343 FSWGRNVNGQLGHSGMQDSNSPVELAALS 371
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ +A G + LAL PSG V S G G G+LGHG D + P+ + F LL+
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAV--FSLLHRGATS 66
Query: 264 VAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA + AV G D +V +WGWG +G LG G+ + +P + AL + VA GD
Sbjct: 67 VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTH 126
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V + +G +++FG ++ G +I D
Sbjct: 127 TLVATAEGQLFAFGRNQNGQCGLGSIQD 154
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFS 174
V ++G+ G+ +G + PQ V SL + G + AV + +VY++
Sbjct: 31 VLSWGRGEDGQLGHGDAEDR--QEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWG 88
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
WG+ RLG + P PL L V +A G + L + +++ G
Sbjct: 89 WGDFGRLGTGDVKDVFIPCPLP-ALAGRRVASVACGDTHTLVATAEGQ---LFAFGRNQN 144
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+ G GS D P+L+ Q + V VA GA H+ V +G V WGWGRYG +G G
Sbjct: 145 GQCGLGSIQDCLEPQLVTALQ--GKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDG 202
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
+ +P + + L VK V G + V E G +Y++G G A L
Sbjct: 203 ESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQL 251
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3269 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3328
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3329 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3386
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3387 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3445
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3446 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3502
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3503 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3562
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3563 GDNDEGQLGDGTTNAIQRPRLVAAL 3587
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3301 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3358
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3359 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3414
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3415 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3474
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3475 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3520
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3335 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3394
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3395 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 3452
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3453 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3508
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 3509 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3566
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 3567 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2282 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2341
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2342 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2398
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2399 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2457
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2458 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2513
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2514 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2573
Query: 339 ESASLGH 345
+ G+
Sbjct: 2574 DHGQQGN 2580
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2239 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2298
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2299 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2358 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2413
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2414 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2471
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2472 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2528
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2402
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2403 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2460
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2461 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2512
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2513 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 2569
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2606
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3234 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3292
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3293 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3352
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3353 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3468
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2491 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2545
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2546 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2603
Query: 155 AIGN 158
A G+
Sbjct: 2604 ACGS 2607
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2554 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2611
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3892 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3951
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3952 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4009
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4010 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4068
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4069 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4125
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4126 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4185
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4186 GDNDEGQLGDGTTNAIQRPRLVAAL 4210
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3924 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3981
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3982 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4037
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4038 SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4097
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4098 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4145
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3958 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4017
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4018 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4075
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4076 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4131
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4132 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4189
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4190 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 395 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 452
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 453 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 511
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 512 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 570
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 571 --IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 628
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
V++ED +V+S+G +
Sbjct: 629 STHCLVLTEDSEVHSWGSND 648
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 350 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 398
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 399 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 454
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 514
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 550
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D + +PQLV+ L +
Sbjct: 359 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQGLASR 404
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 464
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 465 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 521
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ I V G +
Sbjct: 522 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH 602
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2904 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2963
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+++LK + A G+
Sbjct: 2964 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3020
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3021 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3079
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3080 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3135
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3136 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3195
Query: 339 ESASLGH 345
+ G+
Sbjct: 3196 DHGQQGN 3202
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 530 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 587
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + L L
Sbjct: 588 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVL 635
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 11/300 (3%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2860 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2919
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 169
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 2920 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2978
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ G+D +LGH + N +P L+ L+ + IA G + L S +Y+
Sbjct: 2979 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3034
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 287
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3035 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3092
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3093 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3152
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I++L+ RI A G+ +
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3024
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3025 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3082
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3083 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3134
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3135 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3191
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3228
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 127/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 534
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 535 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 590
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H V+ +D V +WG
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG--- 645
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 646 ------SNDQCQ 651
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 497 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 556
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 557 KTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 614
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ VL+ + V+ SWG++ + H +P P L++
Sbjct: 615 EGLQGKKVIDVAAGSTHCLVLTEDSEVH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSK 672
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 673 HIVGIACG 680
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3857 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3915
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3916 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3975
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 3976 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4091
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3113 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3167
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3168 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3225
Query: 155 AIGN 158
A G+
Sbjct: 3226 ACGS 3229
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 390 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 449
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 450 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3176 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3233
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDG 4074
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV IAAG + AC + +++ G G G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4130
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++ +G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4218
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4279 GDNDEGQLGDGTTNAIQRPRLVAAL 4303
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS LG P+ ++SL I++ AA + + +S
Sbjct: 465 LILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIVKIAAHSDGHHYLALSAN 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+++ +L VV A G+ ++A ++ EG
Sbjct: 515 GEVFSWGCGDGGRLGHG--DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + + P + G L+ + V+ ++ G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V TWG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D+ G PQLV+SL +
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A LS G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VY++G G++ LGH
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH 692
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E L N+ V+Q A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLALT 726
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3284
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSW 4068
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + +G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 2288 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2347
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 2348 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVA 2405
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 2406 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVGIACGSGDAQ 2464
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 2465 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVRVECGSQFSVALT 2521
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L KAI +ATG +EDG+VY++
Sbjct: 2522 KAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTW 2581
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 2582 GDNDEGQLGDGTTNAIQRPRLVAAL 2606
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 2320 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2377
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 2378 KLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 2433
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 2434 SDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 2493
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2494 KVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGS 2541
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG+ RPR I SL+GI ++ AAG +
Sbjct: 2354 SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2413
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 2414 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVGIACGSGDAQTLCLTDD 2471
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL AVY
Sbjct: 2472 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVRVECGSQFSVALT---KAGAVY 2527
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 2528 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 2586 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 1298 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAV 1357
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1358 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1414
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L VVQ+A G LA
Sbjct: 1415 HSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPK-MVKVLLGHRVVQVACGSRDAQTLAL 1473
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1474 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 1529
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 1530 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 1589
Query: 339 ESASLGH 345
+ G+
Sbjct: 1590 DHGQQGN 1596
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 1359 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 1418
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L VVQ A G + T L+ E
Sbjct: 1419 LTSSGELYTWGLGEYGRLGHGDTTTQL--KPKMVKVLLGHRVVQVACGSRDAQTLALTDE 1476
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 1477 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 1528
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 1529 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 1585
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 1586 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 1622
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 11/261 (4%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 1293 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL-SSGTVPLPRQVTALSSYV 1351
Query: 151 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 1410
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + AL S +Y+ G G G+LGHG T + P++++ LL + V VA G+
Sbjct: 1411 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKV--LLGHRVVQVACGS 1465
Query: 269 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
A + +G V +WG G +G LG G E ++P+ ++ LN + G + +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 1525
Query: 327 SEDGDVYSFGCGESASLGHNA 347
++ G V+++G G+ LGH +
Sbjct: 1526 TKSGVVWTWGKGDYFRLGHGS 1546
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ P E+L + VVQ A G+ ++ EG+VY + RLG V +
Sbjct: 1285 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQV 1344
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L + V ++A A A G V+S G G GKLGH SR + PRLIE +
Sbjct: 1345 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 1403
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L + + V
Sbjct: 1404 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQV 1461
Query: 317 ATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
A G D T ++++G V+S+G G+ LG
Sbjct: 1462 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 1492
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 1507 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 1561
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 1562 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 1619
Query: 155 AIGN 158
A G+
Sbjct: 1620 ACGS 1623
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 2309
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 2310 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2368
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHG+ P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 2369 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 2428
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 2429 GRLGHSDSED 2438
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 1573 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1627
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHHVVDVACGSGDAQTLCLTDD 4166
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4222
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q ++ V +G + D V +WG G YG LG G +
Sbjct: 4129 SDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQ 4159
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4216
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLVAAL 4301
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIP-VLVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4124 GRLGHSDSED 4133
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4159
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4216
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLVAAL 4301
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4222
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4320
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +++IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L II+ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4006
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4007 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + VA +GD T +++D V+S+G G+ LG
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
N++ +A G H+ AVT G +Y++G++ S G +GH W P+ + S L+G+RI
Sbjct: 333 NTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 392
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A GA T L+S AGQ++ FG +FG +G + + + P+ VESLK + V+AA G +
Sbjct: 393 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 450
Query: 161 TAVLSR------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAALVDYNFRQVA 509
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G+ +AL SG V+++G + G+LG+ + D K P +++ +L + GA
Sbjct: 510 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 564
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H A + + TWG G G LGHG+ E + P +V+AL D + VA G T V+
Sbjct: 565 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 622
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
P+ +++ + V A G+ A+++++G V F WG + RLGH + + EP L+
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 327
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L + +A G + A+ + + GG +GH + P+ + L
Sbjct: 328 ALAGVNTELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 385
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
++ +A GAWH A+V G++ T+G G +G LGHG++ ++PK V++L +K + A
Sbjct: 386 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 445
Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
G + T V E G ++++G G+ LGH
Sbjct: 446 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH 485
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 343
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 344 G 344
G
Sbjct: 328 G 328
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +H+ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPS 222
+EG V+TF G +LGH++ +++ P L+G+L V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL----VTQITCGRQHTTAFV--PS 312
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG G+ ++ K P
Sbjct: 313 SGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 343
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 344 G 344
G
Sbjct: 328 G 328
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +H+ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPS 222
+EG V+TF G +LGH++ +++ P L+G+L V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL----VTQITCGRQHTTAFV--PS 312
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG G+ ++ K P
Sbjct: 313 SGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 12/326 (3%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE-WRPR 87
+ R L + C ++ + + ++AV T++GVV + G N SGQ G G +E R
Sbjct: 347 IERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLR 406
Query: 88 PIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+++L Q ++ I A+ G + ++D G Y++G + G+ + TK + P+L+ES
Sbjct: 407 PVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATK-IHVPKLIES 465
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
LK+ + A++ +AV++ G +YTF + +LG + P L+ +LE V
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKSLEATEVS 524
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
+A G + + C +G +++ G G+LG K P L+ L N VA
Sbjct: 525 MVACGLYH--TIICTAAG-ELFTCGKNDYGQLGLAHNRQIKLPTLV---ALPNEMVSFVA 578
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
G +H+ VV GR ++G YG LG G++ ++VP VV ++ + + G Y T +
Sbjct: 579 CGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVL 638
Query: 326 VSEDGDVYSFGCGESASLGHNAIADG 351
+SE G VY FG LG+ AD
Sbjct: 639 LSEQGQVYVFGRNNKGQLGNRGSADA 664
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 9/303 (2%)
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
+ G +YS G NS G+LG G E + + I Q +G ++++ G V
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTC 385
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
G + G+ G + V + V++L++ + + A+ G L+ G Y++ + +
Sbjct: 386 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+LGH + L+ +L++ + + Y + + +Y+ G G+L
Sbjct: 445 RGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVIT---DAGELYTFGMNDCGQL 501
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G + P+L++ + + +VA G +H + G + T G YG LG +
Sbjct: 502 GLDHTQHQSTPQLVKSLEATEVS--MVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNR 559
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+P +V N++ + VA G Y + VVS G +SFG + LG + V +++
Sbjct: 560 QIKLPTLVALPNEMVSF-VACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVV 618
Query: 358 FLS 360
LS
Sbjct: 619 ALS 621
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS +T G +Y+FG N GQLG T+ + P+ ++SL+ + A G T++ + A
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAA 539
Query: 114 GQVYAFGKD----------------------------------------------SFGEA 127
G+++ GK+ SFG
Sbjct: 540 GELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRN 599
Query: 128 EYGVQG--TKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
+YG G +K+ + P +V N +V+A G + T +LS +G+VY F N +LG+
Sbjct: 600 DYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNR 659
Query: 185 TEPNDVEPHPLLGTLENIP--VVQIAAGY 211
+ + P PL E V +AAG+
Sbjct: 660 GSADALLPVPLKVRPEKNSRRCVDVAAGF 688
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ V++ G +SFG N GQLG G+ + P + R+++A G T+L+S+
Sbjct: 583 HSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQ 642
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGR 169
GQVY FG+++ G+ L+ P V KN V A G + T+++ R
Sbjct: 643 GQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKR 699
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3992 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4049
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4050 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4105
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4106 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4165
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4166 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4211
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3960 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4019
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4020 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4077
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4078 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4136
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4137 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4193
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4194 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4253
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4254 GDNDEGQLGDGTTNAIQRPRLVAAL 4278
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4026 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4085
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4086 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4143
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4144 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4199
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4200 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4257
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4258 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4297
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 417 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 465
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +++IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 466 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 521
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 522 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 581
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 582 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 617
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L II+ AA + + ++
Sbjct: 442 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT 491
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 492 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 549
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 550 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 607
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 608 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 665
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 666 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 715
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 426 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 471
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 472 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 531
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 532 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 588
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 589 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH 669
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 537 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 596
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 597 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 654
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 655 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 702
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2971 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3030
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3031 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3087
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3088 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3146
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3147 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3202
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3203 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3262
Query: 339 ESASLGH 345
+ G+
Sbjct: 3263 DHGQQGN 3269
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2928 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2987
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2988 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3046
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3047 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3102
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3103 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3161 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3217
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3091
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3092 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3149
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3150 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3202 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3258
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3295
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 601
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 602 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 657
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 658 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 712
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 713 ------SNDQCQ 718
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 564 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 623
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 624 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 681
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 682 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 739
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 740 HIVGIACG 747
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 3983
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3984 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4043
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4044 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + VA +GD T +++D V+S+G G+ LG
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4159
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3180 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3234
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3235 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3292
Query: 155 AIGN 158
A G+
Sbjct: 3293 ACGS 3296
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3243 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3300
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 343
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 344 G 344
G
Sbjct: 328 G 328
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 245 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +H+ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPS 222
+EG V+TF G +LGH++ +++ P L+G+L V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL----VTQITCGRQHTTAFV--PS 312
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG G+ ++ K P
Sbjct: 313 SGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4159
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4160 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4216
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLVAAL 4301
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4015 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4222
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4320
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4006
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4007 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A V G + TWG GRYG
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + VA +GD T +++D V+S+G G+ LG
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
N++ +A G H+ AVT G +Y++G++ S G +GH W P+ + S L+G+RI
Sbjct: 342 NAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 401
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A GA T L+S AGQ++ FG +FG +G + + + P+ VESLK + V+AA G +
Sbjct: 402 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 459
Query: 161 TAVLSR------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAALVDYNFRQVA 518
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G+ +AL SG V+++G + G+LG+ + D K P +++ +L + GA
Sbjct: 519 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 573
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H A + + TWG G G LGHG+ E + P +V+AL D + VA G T V+
Sbjct: 574 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 631
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
P+ +++ + V A G+ A+++++G V F WG + RLGH + + EP L+
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 336
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L + +A G + A+ + + GG +GH + P+ + L
Sbjct: 337 ALAGVNAELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 394
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
++ +A GAWH A+V G++ T+G G +G LGHG++ ++PK V++L +K + A
Sbjct: 395 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 454
Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
G + T V E G ++++G G+ LGH
Sbjct: 455 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH 494
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 165/380 (43%), Gaps = 66/380 (17%)
Query: 3 QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK- 61
Q R F+ E E +DL +KC SW +S+ K
Sbjct: 47 QSRKKFEEY-EQEGEDLMEKCMMSWP-----------------------NKYSLDQIKKY 82
Query: 62 -GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
V+SFG N+ G+LG G E P +R L +++I ++G + L+++ G+++ G
Sbjct: 83 HAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG 142
Query: 121 K---DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 176
D G E G+K P VE L IF+ Q A G++ T LS+EG+VY WG
Sbjct: 143 SNLHDKLG-LEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYV--WGG 197
Query: 177 --NDARLGHHTEPNDVEPHP--LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
++ R E D + LL + + QI G + LAL +YS G G
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL---DDNGTLYSWGVG 254
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+ GHG D++ P+ I+ F + + AG H + D +V WG GRYG G
Sbjct: 255 EKGECGHGKFEDQETPQRIKFFDGKII--TQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312
Query: 293 HGNEECESVPKVVQ---------ALNDV-------------KAIHVATGDYTTFVVSEDG 330
G E ++P++V L+D K +A G+ T V++ G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372
Query: 331 DVYSFGCGESASLGHNAIAD 350
++SFG + LGHN + +
Sbjct: 373 QIFSFGYNQQGQLGHNTVDN 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 20 KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
++K +K VL AG+ Q G HS+A+ G +YS+G G+ GHG
Sbjct: 209 ERKDNAKYKPVLLQSFAGKKI-----KQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGK 263
Query: 80 TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGT---K 135
E++ P+ I+ G I Q AG T+ I+ QVYA+G +G+ +G + T +
Sbjct: 264 FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQ 323
Query: 136 LVTSP---------------QLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
LV P +++E K+ + Q A G T VL+ G++++F +
Sbjct: 324 LVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQG 383
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH+T N P + G L N VQ+AAG + L C + VY+ G G+ G
Sbjct: 384 QLGHNTVDNYCRPKLVEGML-NHKTVQVAAGRNHSL---CLTNKNDVYACGNNQYGQCGL 439
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
R E LL++ + AG +H+ VV
Sbjct: 440 PDR--EMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 28/319 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+G HS VT G ++ GSN +LG TT + +P+ L I I Q A G T
Sbjct: 124 SGGKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHT 183
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S GQVY +G + Q K P L++S + Q G+F + L
Sbjct: 184 LALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALD 243
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +Y++ G GH + D E + + + QI AG + LA+
Sbjct: 244 DNGTLYSWGVGEKGECGH-GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQ--- 299
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI------------------EQFQLLNLQPVV--VA 265
VY+ G G G+ G G + P+L+ E + P + +A
Sbjct: 300 VYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIA 359
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
AG H V+ G++ ++G+ + G LGH + PK+V+ + + K + VA G +
Sbjct: 360 AGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLC 419
Query: 326 VSEDGDVYSFGCGESASLG 344
++ DVY+ G + G
Sbjct: 420 LTNKNDVYACGNNQYGQCG 438
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4052 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSAC 4111
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4112 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4169
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4170 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4225
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4226 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4284 EGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4018 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4075
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I +V +AAG + AC + +Y+ G G G+LGH
Sbjct: 4076 KLGHGNRSPCDRPR-VIESLRGIELVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4131
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4132 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4191
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4192 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4237
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 155/316 (49%), Gaps = 11/316 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3986 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4045
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I +V A
Sbjct: 4046 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIELVDVA 4103
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4104 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 4162
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4163 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4219
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4220 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4279
Query: 336 GCGESASLGH---NAI 348
G + LG NAI
Sbjct: 4280 GDNDEGQLGDGTTNAI 4295
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E+VP +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAVPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLALT 726
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAV 3056
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3114 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3228
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3229 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3288
Query: 339 ESASLGH 345
+ G+
Sbjct: 3289 DHGQQGN 3295
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3284
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 11/259 (4%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 2992 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQVTALSSYV 3050
Query: 151 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 3109
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + AL S +Y+ G G G+LGHG T + P++++ LL + + VA G+
Sbjct: 3110 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGS 3164
Query: 269 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
A + +G V +WG G +G LG G E ++P+ ++ LN + G + +
Sbjct: 3165 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Query: 327 SEDGDVYSFGCGESASLGH 345
++ G V+++G G+ LGH
Sbjct: 3225 TKSGVVWTWGKGDYFRLGH 3243
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 133 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G + P E+L + VVQ A G+ ++ EG+VY + RLG V
Sbjct: 2980 GLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI 3039
Query: 193 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+ L + V ++A A A G V+S G G GKLGH SR + PRLIE
Sbjct: 3040 PRQVTALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+ ++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L +
Sbjct: 3099 ALKTKRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156
Query: 313 AIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
I VA G D T ++++G V+S+G G+ LG
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + V P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAV--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTF 324
N++C+ P + L+ + +A G +F
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4009
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4010 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4069
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + + L V VAAG H+A V G + TWG GRYG
Sbjct: 4070 GEAEDGKLGHGNRSPCDRPRVIESLRGIEL--VDVAAGGAHSACVTAAGDLYTWGKGRYG 4127
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + VA +GD T +++D V+S+G G+ LG
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4185
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3260
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3269 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3955 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4012
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L + VV IAAG + AC + +++ G G G+LGH
Sbjct: 4013 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4068
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 4069 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4128
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4129 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4174
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3923 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3982
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 3983 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4040
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4041 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4099
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L M V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4100 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4156
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4157 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4216
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4217 GDNDEGQLGDGTTNAIQRPRLVAAL 4241
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G+ ++ AAG +
Sbjct: 3989 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 4048
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ +G+++ +GK +G +G +L P+LV++L+ V+ A G+ T L+ +
Sbjct: 4049 ITASGELFTWGKGRYGRLGHGDSEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDD 4106
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4107 DMVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4162
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4163 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4220
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4221 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4260
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 22/306 (7%)
Query: 49 IAGPGHSIAVTSKGV--------VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
+ GP H A++S GV V+ S S P I L +I++
Sbjct: 390 VCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYKSTTLAPMLIHGLSSRKIVKL 449
Query: 101 AAGA-GRTML-ISDAGQVYAFG-----KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
AA G+ L +S +G+VY++G + G+A Y ++ L+T+ ++ K VVQ
Sbjct: 450 AAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATY-LEEPALITTFSGKQTGKQ--VVQ 506
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ ++A ++ +G +YT+ GN RLGH + DV L+ L+ VV +A G
Sbjct: 507 IACGSTYSAAVTADGELYTWGRGNYGRLGHGSS-EDVTTPMLVTALKGQKVVDVACGSGD 565
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
LA +G V+S G G GKLG G K P+L+E+ Q L++ V V G+ +
Sbjct: 566 AQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI--VKVCCGSQFSVA 622
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ +DG+V TWG G LGHG +E PK++ +L K + +A G ++++G+V+
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682
Query: 334 SFGCGE 339
S+G +
Sbjct: 683 SWGSND 688
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G +Y+ G ++G+LG G + + PR I +L ++ +
Sbjct: 2955 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAV 3014
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3015 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3072
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3131
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3132 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3187
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 3188 VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3247
Query: 340 SASLGH 345
G+
Sbjct: 3248 HGQQGN 3253
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G +S AVT+ G +Y++G + G+LGHG++E+ P + +L+G +++ A G+G
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+T+ +++ GQV+++G +G + G G+ +P+LVE L+++ +V+ G+ F+ L
Sbjct: 566 AQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 623
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+++G+VYT+ G++ RLGH T+ + P LL +L+ VV IA G + LAL
Sbjct: 624 TKDGQVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKKVVDIAVGSTHCLALT 676
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A + + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2912 GLESAASIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2971
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G++YA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 2972 EGKIYACGEATNGRLGLGL-SSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3030
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 3031 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 3086
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3144
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3145 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3201
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3075
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G + T L+ E
Sbjct: 3076 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3133
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3185
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3186 GV-VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3242
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3279
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKN 148
++L + Q +++S +G VY Q K T +P L+ L +
Sbjct: 397 KALSSTGVTQIVCSEKVFLILSRSGAVY-------------TQNYKSTTLAPMLIHGLSS 443
Query: 149 IFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENI 202
+V+ A G F A LS G VY++ G+ RLGH EP + G
Sbjct: 444 RKIVKLAAHPDGQHFLA-LSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGK 502
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
VVQIA G Y A+ +Y+ G G G+LGHGS D P L+ + + V
Sbjct: 503 QVVQIACGSTYSAAVTADGE---LYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDV 559
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+G V ++G+V +WG G YG LG G + PK+V+ L D+ + V G
Sbjct: 560 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQF 619
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
+ +++DG VY++G G++ LGH
Sbjct: 620 SVALTKDGQVYTWGKGDNQRLGH 642
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVTAD 3946
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3947 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4006
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE L ++ V +AAG H+A + G + TWG GRYG
Sbjct: 4007 GEAEDGKLGHGNRSPCDRPRVIE--SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V AL + I VA +GD T +++D V+S+G G+ LG
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGR 4122
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3164 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG 3218
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3219 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3276
Query: 155 AIGN 158
A G+
Sbjct: 3277 ACGS 3280
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3227 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAW 3286
Query: 111 SDAG---------QVYAFGKDSFGEAEYGVQ 132
+ ++ +DS G + GVQ
Sbjct: 3287 TTVDVTTPSVHEPVLFQTARDSLGASYLGVQ 3317
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P LI + + H + G V +WG G G LGHG+ P ++
Sbjct: 435 PMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITT 494
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ + + +A G + V+ DG++Y++G G LGH + D
Sbjct: 495 FSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSED 541
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 23/307 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ G+N QLGH + RP PI LQ +IQ A G+
Sbjct: 40 QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M +++ GQ+ ++G + G+ + ++ P+++ L + VVQ A GN + L+
Sbjct: 98 SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 218
G +Y SWG++ +LG + P D+ PH PL L T+ IP+ IA G + +L++ +
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLISKS 212
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
AV+ G G+LG + +P ++ + L ++ V G ++ + +G
Sbjct: 213 S-----AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
V T G G YG LGHG E +P++V L VA G+ +T +V G VYSFG
Sbjct: 266 GVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325
Query: 338 GESASLG 344
G S LG
Sbjct: 326 GASGQLG 332
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+T G + S+G N GQ+GH T + P+ +R L ++Q A G
Sbjct: 90 QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G+ GVQ K + +P + ++ I + A G +
Sbjct: 150 HSLALTSCGELYSWGSNIYGQ--LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207
Query: 163 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
++S+ V F WG + +LG + E N P L ++ + V + G Y + L +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQL-KSMRTLGVRFVTCGDEYSVFLTNE 264
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 279
V++ G G G+LGHG+ +E PR++ +L+ VA G H A+V GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVV 305
V ++G G G LG N +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 16/290 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G S GQLG G E E P I + Q A G T+ ++ GQVYA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
+ + G +L T P + L+ V+Q A G+ + L+ G++ SWG++
Sbjct: 63 NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
++GH T+ + +E +L L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172
Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
S D H + +L + +A G H+ ++ + V WG G LG +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ P ++++ + V GD + ++ +G V++ G G LGH A
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGA 282
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 86
+LRFL++ R Q G HS+A+TS G +YS+GSN GQLG + ++ P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ ++ GI + A G + LIS + V+ +GK++ G+ G+ + P ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ--LGLNDEQNRAYPSQLKSM 243
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ + V G+ ++ L+ EG V+T GN +LGH N++ P ++ L + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVI-ELMGSTITQ 302
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
+A G + LAL PSG VYS G G G+LG + + P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS ++ V+ +G N+ GQLG + P ++S++ + + G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGASNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
VY+F G +LG + P ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 25/307 (8%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIAG H+IA+ S G V+++G+N GQLG G+T + R P++ +I A G
Sbjct: 197 AIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTD--RSTPVQVSGLTDVIAIAGGYAH 254
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ + G V+A+G + G G + + P V L ++ + A GN T L
Sbjct: 255 TIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIAI--AGGNAHTIALKS 310
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V+ +WG++ +LG + N P + G + V+ IA GY + + L +
Sbjct: 311 DGTVW--AWGDNEGGQLGDGSTTNRSTPVKVSGLAD---VIAIAGGYSHTIVLRSDGT-- 363
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
V++ G GG+LG GS T+ P Q+ L V+ +A G +H V DG + W
Sbjct: 364 -VWTWGHNEGGQLGDGSTTNRSTP-----VQVSGLADVIAIAGGVYHTIAVKSDGTMWAW 417
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G+ YG LG G S P V L DV AI A G Y T + DG V+++G L
Sbjct: 418 GYNWYGQLGDGTTINSSTPVQVNGLTDVIAI--AGGYYHTIAMKSDGAVWTWGFNYYGQL 475
Query: 344 GHNAIAD 350
G +I +
Sbjct: 476 GDGSITN 482
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 20/293 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+IA+ S G V+++G N+SGQLG GTT R P++ + +I A G T+ +
Sbjct: 652 HTIALKSDGTVWTWGWNNSGQLGDGTTIN--RSTPVQVIGLTDVIAIAGGDYHTIALKSD 709
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G + +G+ G + ++P V+ L +I + A G + L +G V+ +
Sbjct: 710 GTVWTWGFNYYGQLGGGATTNR--STPVQVKGLADIIAI--AGGYVHSIALKSDGTVWAW 765
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG + + + P + G + ++ IA GY + +AL + V++ G
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGLTD---IIAIAGGYIHTIALKSDGT---VWAWGHNE 819
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GG+LG G+ T+ P Q+ L V+ V A +H + DG V TWG YG LG
Sbjct: 820 GGQLGDGTTTNSSTP-----VQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLG 874
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G+ S+P V L DV AI A G Y T + DG V+++G + LG+
Sbjct: 875 DGSTTERSLPVQVIGLTDVIAI--AGGYYHTIALKSDGAVWAWGYNGNNQLGN 925
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 141/314 (44%), Gaps = 20/314 (6%)
Query: 32 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
R + G SQ AG H++ + G V++ G+N +GQLG GTT R P++
Sbjct: 1028 RGISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTIN--RSTPVQV 1085
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
+I A G T+ + V+A+G +S+G+ G + + +P V L NI
Sbjct: 1086 SGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNIIA 1143
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+ A G T L +G V+ + + +LG + N P + G + V+ IA Y
Sbjct: 1144 I--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGEY 1198
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-H 270
+ +AL + V++ G G+LG GS T+ P Q+ L V+ AG + H
Sbjct: 1199 VHTVALKSDGT---VWAWGYNGYGQLGDGSTTNRSTP-----VQVSGLTDVIAIAGGYVH 1250
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ DG V TWGW G LG G P V L D AI +A GDY T + D
Sbjct: 1251 TIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDN 1308
Query: 331 DVYSFGCGESASLG 344
V+++G LG
Sbjct: 1309 TVWAWGSNSYGQLG 1322
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 139/314 (44%), Gaps = 19/314 (6%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIAG H+IA+ S V+++GSNS GQLG GT P P+ L II A G
Sbjct: 1093 AIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLT--NIIAIAGGYVH 1150
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ + G V+A+G + +G+ G T ++P V L ++ + T L
Sbjct: 1151 TIALKSDGTVWAWGYNGYGQ--LGDGSTTNRSTPVQVSGLTDVIAIAGEY--VHTVALKS 1206
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+ + + +LG + N P + G + V+ IA GY + +AL + V
Sbjct: 1207 DGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGGYVHTIALKSDGT---V 1260
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
++ G G+LG G+ + P + + +A G +H + D V WG
Sbjct: 1261 WTWGWNNSGQLGDGTTINRLTPVQVSGLT----DAIAIAGGDYHTIALKSDNTVWAWGSN 1316
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LG G P V L D AI +A GDY T + D V+++G LG
Sbjct: 1317 SYGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDV 1374
Query: 347 AIADGQVCSLLFLS 360
+ A+ + LS
Sbjct: 1375 STANSLTPAQCLLS 1388
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 144/302 (47%), Gaps = 24/302 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ AG H++ + G V+++G+N +GQLG +T R P++ +I A GA
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTN--RSTPVQVSGLTDVIAIAGGAY 203
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G V+A+G + G + G T ++P V L ++ + A G T L
Sbjct: 204 HTIALKSDGTVWAWGNNEGG--QLGDGSTTDRSTPVQVSGLTDVIAI--AGGYAHTIALK 259
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+G V+ +WG++ RLG + N P + G + V+ IA G + +AL +
Sbjct: 260 SDGTVW--AWGDNEGGRLGDGSTTNRSIPVKVGGLSD---VIAIAGGNAHTIALKSDGT- 313
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 282
V++ G GG+LG GS T+ P ++ L V+ AG + H V+ DG V T
Sbjct: 314 --VWAWGDNEGGQLGDGSTTNRSTP-----VKVSGLADVIAIAGGYSHTIVLRSDGTVWT 366
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LG G+ S P V L DV AI A G Y T V DG ++++G
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQ 424
Query: 343 LG 344
LG
Sbjct: 425 LG 426
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
G +Q AG H++ + G V+++G+N + QLG G+T + P + L
Sbjct: 585 GSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT--D 642
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I A G T+ + G V+ +G ++ G+ G + ++P V L ++ + A
Sbjct: 643 AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINR--STPVQVIGLTDVIAI--AG 698
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G++ T L +G V+T+ + +LG N P + G + ++ IA GY + +A
Sbjct: 699 GDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD---IIAIAGGYVHSIA 755
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVG 275
L + V++ G G+LG GS TD P Q+ L ++ AG + H +
Sbjct: 756 LKSDGT---VWAWGYNGYGQLGDGSTTDHLTP-----VQVSGLTDIIAIAGGYIHTIALK 807
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG G LG G S P V L DV A+ Y T + DG V+++
Sbjct: 808 SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAVTARL--YHTIALKSDGTVWTW 865
Query: 336 G 336
G
Sbjct: 866 G 866
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 137/341 (40%), Gaps = 58/341 (17%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+IAV S G ++++G N GQLG GTT P + L +I A G T+ +
Sbjct: 404 HTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLT--DVIAIAGGYYHTIAMKSD 461
Query: 114 GQVYAFGKDSFGE------------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G V+ +G + +G+ A+ + G K V +P + + +A+ N +
Sbjct: 462 GAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGW- 520
Query: 162 AVLSREGRVYT--FSWGN------DARLGHHTEPNDVEPHPLLGTL------------EN 201
++ G T F +G DA LG L +N
Sbjct: 521 --VNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQN 578
Query: 202 I------------PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
I P QI+AG + L L +P G V++ G +LG GS TD P
Sbjct: 579 IGGIYYGSETTFMPRTQISAGAYHTLTL--KPDGT-VWAYGANWNSQLGDGSTTDSSTPV 635
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ + +A G +H + DG V TWGW G LG G S P V L
Sbjct: 636 QVSGLT----DAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLT 691
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
DV AI A GDY T + DG V+++G LG A +
Sbjct: 692 DVIAI--AGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTN 730
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 48 AIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIAG H+IA+ S G V+++G N G+LG G+T P + L +I A G
Sbjct: 247 AIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLS--DVIAIAGGNAH 304
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ + G V+A+G + G+ G T ++P V L ++ + A G T VL
Sbjct: 305 TIALKSDGTVWAWGDNEGGQ--LGDGSTTNRSTPVKVSGLADVIAI--AGGYSHTIVLRS 360
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+T+ +LG + N P + G + V+ IA G + +A+ + +
Sbjct: 361 DGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKSDGT---M 414
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG G+ + P Q+ L V+ +A G +H + DG V TWG+
Sbjct: 415 WAWGYNWYGQLGDGTTINSSTP-----VQVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGF 469
Query: 286 GRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDYTTFVVSE 328
YG LG G+ S P + + + V V TG T +S
Sbjct: 470 NYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSS 514
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 21/285 (7%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIAG H+IA+ S G V+++G N GQLG G T P ++ L II A G
Sbjct: 695 AIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLA--DIIAIAGGYVH 752
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G V+A+G + +G+ G L +P V L +I + A G T L
Sbjct: 753 SIALKSDGTVWAWGYNGYGQLGDGSTTDHL--TPVQVSGLTDIIAI--AGGYIHTIALKS 808
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+ + +LG T N P + G + V+ + A + +AL + V
Sbjct: 809 DGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD---VIAVTARLYHTIALKSDGT---V 862
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
++ G + G+LG GS T+ P Q++ L V+ +A G +H + DG V WG+
Sbjct: 863 WTWGRNIYGQLGDGSTTERSLP-----VQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGY 917
Query: 286 GRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDYTTFVVSE 328
LG+ + + S P + +N V V TG T +S
Sbjct: 918 NGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSS 962
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 58/341 (17%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII---QAAAGAGRTMLI 110
H+IA+ S G V+++G N GQLG G+ P RSL G++ + G+ + +
Sbjct: 454 HTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQ-RSLSGMKSVATPTVTTGSATCVSL 512
Query: 111 SDA---GQVYAFGKDSFGEAEYGV------QGTKLVT---------------SPQLV--- 143
S A G V G + +YG TK ++ +P
Sbjct: 513 SSALLNGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYC 572
Query: 144 ----ESLKNIFV---------VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
+++ I+ Q + G + T L +G V+ + +++LG + +
Sbjct: 573 RIASQNIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS 632
Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
P + G + + IA G + +AL + V++ G G+LG G+ + P
Sbjct: 633 TPVQVSGLTD---AIAIAGGVYHTIALKSDGT---VWTWGWNNSGQLGDGTTINRSTP-- 684
Query: 251 IEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
Q++ L V+ +A G +H + DG V TWG+ YG LG G S P V+ L
Sbjct: 685 ---VQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLA 741
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
D+ AI A G + + DG V+++G LG + D
Sbjct: 742 DIIAI--AGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTD 780
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
IP QI+AG + L L +P G AV++ G G+LG S T+ P Q+ L
Sbjct: 143 IPRSQISAGAYHTLTL--KPDG-AVWTWGANWNGQLGDESTTNRSTP-----VQVSGLTD 194
Query: 262 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
V+ +A GA+H + DG V WG G LG G+ S P V L DV AI A G
Sbjct: 195 VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIAI--AGGY 252
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
T + DG V+++G E LG + +
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3988 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4047
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4048 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4105
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4106 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4161
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4162 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4220 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4259
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGK 121
+Y+ G + G+LG G TE P + S+Q + I + A +G + +S G+VY++G+
Sbjct: 3948 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4007
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G+ +G + P+++ESL+ I VV A G +A ++ G +YT+ G RL
Sbjct: 4008 AEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4065
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + ++P L+ L+ VV IA G L C V+S G G GKLG G
Sbjct: 4066 GHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDDTVWSWGDGDYGKLGRGG 4123
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
K P I+ L L V V G+ + + + G V TWG G Y LGHG+++
Sbjct: 4124 SDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4181
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH---NAIADGQVCSLL 357
P+ VQ L K I +ATG +EDG+VY++G + LG NAI ++ + L
Sbjct: 4182 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4240
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2986 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3045
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3046 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3102
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3103 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3161
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3162 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3217
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3218 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3277
Query: 339 ESASLGH 345
+ G+
Sbjct: 3278 DHGQQGN 3284
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2943 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3002
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3003 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3061
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3062 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3117
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3118 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3175
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3176 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3232
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3106
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3107 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3164
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3165 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3216
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3217 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3273
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3310
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3195 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3249
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3250 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3307
Query: 155 AIGN 158
A G+
Sbjct: 3308 ACGS 3311
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3258 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3315
>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 900
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQA-AAG- 103
Q AGP HS+A+ G VY++GS +SGQLGHG+ E P R L G R++Q AAG
Sbjct: 107 QVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGT 166
Query: 104 --AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
A ++ + D G VY +G++ G A + V+ L L +L+ V+ A G+
Sbjct: 167 DDASTSLAVVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTG 226
Query: 162 AVLSREGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
L+ +GR F+WG N A T + P P++G + AG
Sbjct: 227 VALTADGR--AFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAV 284
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQ 276
G A Y G G G LG G + P L +E L ++PV + +G + V+G
Sbjct: 285 IDDDGRA-YGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQNFSVVLGA 343
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKAIHVATGDYTTFVVSEDGDVY 333
DGR+ WG G G LG+G V L+ V+ +HV+ G T + DG VY
Sbjct: 344 DGRLAAWGNGTGGQLGNGASATSWHAVAVGTDGVLDGVEVVHVSAGQRHTVALGRDGQVY 403
Query: 334 SFGCGESASLGHN 346
++G G S LG+
Sbjct: 404 AWGQGLSGELGNG 416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 119/276 (43%), Gaps = 8/276 (2%)
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ AAG ++L+ G+V+A+G ++ G+ G G LV P V+ +L + VVQ A G
Sbjct: 52 RVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAG 111
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--YLL 215
+ L+ +G VY + G +LGH + P + G L+ VVQ+ A
Sbjct: 112 PEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDAST 171
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+LA G VY+ G LGG+ GH L + V VAAG +
Sbjct: 172 SLAVVDDGT-VYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALT 230
Query: 276 QDGRVCTWGWGRYGCLGHG-NEECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGD 331
DGR WG G +G G + P V AL+ + + +G T V+ +DG
Sbjct: 231 ADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGR 290
Query: 332 VYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
Y +G G+ +LG A+ L + L I
Sbjct: 291 AYGWGAGDHGALGTGGTANAPTPVLADMEALDQLGI 326
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 145/299 (48%), Gaps = 17/299 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT + V P+ + SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG E ++ +L IP QIAAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
G G+LG D P L++ L Q VV + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDDNDRYVPTLLKS---LRSQKVVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L + G +TT V G +YSFG G + LG
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G + GQLG TEE R PR IRSL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +V+++G++ +G+ G + K TSPQ+++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + ND LL +L + VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEG---GVF 264
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
V + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 245 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
++ P++I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQTSPQMIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++L K +H+ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + V P L++SL++ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRSQKVVHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + ++ V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSV-VTQITCGRQHTTAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG T N P + G+
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGS 344
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 23/307 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ G+N QLGH + RP PI LQ +IQ A G+
Sbjct: 40 QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M +++ GQ+ ++G + G+ + ++ P+++ L + VVQ A GN + L+
Sbjct: 98 SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 218
G +Y SWG++ +LG + P D+ PH PL L T+ IP+ IA G + +L++ +
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLISKS 212
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
AV+ G G+LG + +P ++ + L ++ V G ++ + +G
Sbjct: 213 S-----AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
V T G G YG LGHG E +P++V L VA G+ +T +V G VYSFG
Sbjct: 266 GVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325
Query: 338 GESASLG 344
G S LG
Sbjct: 326 GASGQLG 332
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+T G + S+G N GQ+GH T + P+ +R L ++Q A G
Sbjct: 90 QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G+ GVQ K + +P + ++ I + A G +
Sbjct: 150 HSLALTSCGELYSWGSNIYGQ--LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207
Query: 163 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
++S+ V F WG + +LG + E N P L ++ + V + G Y + L +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQL-KSMRTLGVRFVTCGDEYSVFLTNE 264
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 279
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVV 305
V ++G G G LG N +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 16/288 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G S GQLG G E E P I + Q A G T+ ++ GQVYA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
+ + G +L T P + L+ V+Q A G+ + L+ G++ SWG++
Sbjct: 63 NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
++GH T+ + +E +L L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172
Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
S D H + +L + +A G H+ ++ + V WG G LG +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++++ + V GD + ++ +G V++ G G LGH
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH 280
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 86
+LRFL++ R Q G HS+A+TS G +YS+GSN GQLG + ++ P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ ++ GI + A G + LIS + V+ +GK++ G+ G+ + P ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ--LGLNDEQNRAYPSQLKSM 243
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ + V G+ ++ L+ EG V+T GN +LGH N++ P ++ L + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVI-ELMGSTITQ 302
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
+A G + LAL PSG VYS G G G+LG + + P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS ++ V+ +G N+ GQLG + P ++S++ + + G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
++ G V+ G ++G+ +GV +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGVSNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
VY+F G +LG + P ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 28/309 (9%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P P+ +L G++I+QAA G
Sbjct: 47 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHC 106
Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 161
+ + D G YA+G + +G E E GT+ + P + V Q A G +
Sbjct: 107 LAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHS 166
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
VL++EG V+T+ G P D++ P + G LE + V+ + A L
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRVIAVGA----FHNL 213
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G+ +++ G G+LG G HP +E L+L V +AAG WH+ +
Sbjct: 214 ALTEDGI-LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSL--VDIAAGGWHSTALTIQ 270
Query: 278 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG G +G LG G+++ VP V+ L + V+ G + ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYG 330
Query: 337 CGESASLGH 345
G+ LG+
Sbjct: 331 RGDHGRLGY 339
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+A P AV + G G G+LG G ++ +E + VV AG+ ++ + +
Sbjct: 1 MAAPPRATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICE 58
Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DGR+ TWGW + G LGH + + ES P V AL +K + A G + V ++G Y++
Sbjct: 59 DGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAW 118
Query: 336 GCGESASLG 344
G E G
Sbjct: 119 GGNEYGQCG 127
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 114/285 (40%), Gaps = 59/285 (20%)
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
A V A+G G+ G+ G + VE+L + V G+ + + +GR++T
Sbjct: 7 ATAVLAWGSGEDGQ--LGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFT 64
Query: 173 FSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ W LGH + + P P+ L + +VQ A G + LA+ +G A Y+ G
Sbjct: 65 WGWNQRGTLGHPPKTKTESSPGPVH-ALAGLKIVQAAIGGWHCLAV--DDNGHA-YAWGG 120
Query: 232 GLGGKLGHGSRTDEKHPRLIE------QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG- 284
G+ G E R + Q L+ VAAG H+ V+ Q+G V TWG
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQ 180
Query: 285 -------------------------------------------WG--RYGCLGHGNEECE 299
WG YG LG G+ +
Sbjct: 181 PWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPR 240
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P V+ L+D+ + +A G + + ++ G+VY++G GE LG
Sbjct: 241 SHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLG 285
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG G E + V+AL V G + + EDG ++++G +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQ 69
Query: 340 SASLGH-----NAIADGQVCSLLFLSIFQ 363
+LGH + G V +L L I Q
Sbjct: 70 RGTLGHPPKTKTESSPGPVHALAGLKIVQ 98
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 152/308 (49%), Gaps = 22/308 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
S +AG +S+A+ G ++++G N G LGH T+ E P + +L G++I+QAA G
Sbjct: 44 SAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGG 103
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 158
+ + D G+ YA+G + +G E E GT+ + P + V Q A G
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLAL 217
+ VL++EG V+T+ G P D++ ++ + V IA G + LAL
Sbjct: 164 THSVVLTQEGHVWTW--------GQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLAL 215
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ +++ G G+LG G P +E L NL V +AAG WH+A + ++
Sbjct: 216 SVD---RILWAWGNNEYGQLGIGDTQPRSQPIRVEG--LSNLSLVDIAAGGWHSAALTKE 270
Query: 278 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG G +G LG G+++ VP VQ L + V+ G + V++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYG 330
Query: 337 CGESASLG 344
G+ LG
Sbjct: 331 RGDHGRLG 338
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 25/291 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V ++GS GQLG G +E+ R R I +L + AG+ ++ I D G ++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQ 69
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK +SP V++L + +VQAAIG + + +GR Y +WG +
Sbjct: 70 RGTLGHPPE-TKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQC 126
Query: 184 HTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
EP E P P L+ + V Q+AAG + + L + V++
Sbjct: 127 GEEPERKEDGTRALRRDIPIPQRCALK-LKVRQVAAGGTHSVVLTQEGH---VWT----W 178
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G G + P ++ + +++ +A GA+H + D + WG YG LG
Sbjct: 179 GQPWPPGDIKNISTPVRVQGLEQVSM----IAVGAFHNLALSVDRILWAWGNNEYGQLGI 234
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+ + S P V+ L+++ + +A G + + ++++G+VY++G GE LG
Sbjct: 235 GDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLG 285
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3239 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3296
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 3297 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 3352
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 3353 SDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3412
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 3413 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3458
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 157/325 (48%), Gaps = 12/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3207 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3266
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3267 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 3324
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 3325 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVDALQGHRVVDVACGSGDAQ 3383
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3384 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 3440
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG Y++
Sbjct: 3441 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTW 3499
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 3500 GDNDEGQLGDGTTNAIQRPRLVAAL 3524
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 11/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3273 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 3332
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LV++L+ VV A G+ T L+ +
Sbjct: 3333 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVDALQGHRVVDVACGSGDAQTLCLTDD 3390
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 3391 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 3446
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG TWG
Sbjct: 3447 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGSY-TWGDND 3503
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 3504 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2218 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2277
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2278 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2334
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2335 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2393
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2394 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2449
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2450 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2509
Query: 339 ESASLGH 345
+ G+
Sbjct: 2510 DHGQQGN 2516
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 146/293 (49%), Gaps = 11/293 (3%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A T + V+ +G N QLG + P +L + ++Q A G+ ++ G+V
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2238
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
YA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++
Sbjct: 2239 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2297
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G
Sbjct: 2298 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 2353
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG
Sbjct: 2354 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2411
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2412 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2464
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2338
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2339 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2396
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2397 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2448
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2449 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 2505
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2542
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2427 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2481
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2482 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2539
Query: 155 AIGN 158
A G+
Sbjct: 2540 ACGS 2543
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3172 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 3228
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3229 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3347
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 3348 GRLGHSDSED 3357
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2490 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2547
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 158/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 4239 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4298
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I V A
Sbjct: 4299 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVADVA 4356
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4357 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4415
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4416 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4472
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4473 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4532
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4533 GDNDEGQLGDGTTNAIQRPRLVAAL 4557
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4271 GAG--GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4328
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I V +AAG + AC + +Y+ G G G+LGH
Sbjct: 4329 KLGHGNRSPCDRPR-VIESLRGIEVADVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4384
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4385 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4444
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4445 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4492
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI + AAG +
Sbjct: 4305 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSAC 4364
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4365 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4422
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4423 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4478
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4479 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4536
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4537 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4576
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 725 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 774
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 775 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGE 832
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 833 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 890
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 891 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 948
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 949 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 998
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L ++ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 700 VIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 748
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 749 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVIST 804
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 805 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 864
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 865 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 900
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 709 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 754
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 755 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHV 814
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 815 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 871
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 872 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 931
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 932 ALTKDGQVYSWGKGDNQRLGH 952
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 820 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 879
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 880 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 937
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 938 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 985
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 3254 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV 3313
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3314 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3370
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3371 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3429
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3430 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3485
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3486 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3545
Query: 339 ESASLGH 345
+ G+
Sbjct: 3546 DHGQQGN 3552
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 11/299 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 3211 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3270
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ V +L + V + A+ G L+ +G+V
Sbjct: 3271 EGKVYACGEATNGRLGLGL-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3329
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3330 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3385
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3443
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3444 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3502
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3374
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3375 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3432
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3484
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3485 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDSGQVYA 3541
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +V L K VA G
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACG 3578
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 827 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 884
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 885 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 940
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 941 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 995
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 996 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS--------SCS 1041
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G VCS+ F
Sbjct: 1042 E-WSIGLRVPFVVDVCSMTF 1060
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 847 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 906
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 907 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 964
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 965 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTK 1022
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 1023 HIVGIACG 1030
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 96/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4262
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4263 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4322
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ VAAG H+A V G + TWG GRYG
Sbjct: 4323 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + E + PK+V+AL + + +A +GD T +++D V+S+G G+ LG
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4438
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3463 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3517
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV L+ + +
Sbjct: 3518 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVHGLEGQKITRV 3575
Query: 155 AIGN 158
A G+
Sbjct: 3576 ACGS 3579
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
H +AVT G VY++G N GQ G+GTT +P + L+G +I + A G+ ++
Sbjct: 3529 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSV 3583
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4109
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4167
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4285
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 4286 DGTTNAIQRPRLVAAL 4301
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ GV GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4015 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4073 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4128
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4129 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4222
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTF 324
N++C+ P + L+ + +A G +F
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4004
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L + + VA G + V+ GD+Y++G G
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4124 GRLGHSDSED 4133
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 26/310 (8%)
Query: 44 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+N AIA G H++A+ G V+S+G+N+ GQLG+GT + + P ++ L +++A
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEA-- 450
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G+ ++ + G V+ +G F E+ + + TK + SP ++ K + + A G +
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 221
VL ++G ++ GND T+ + V L L+NI V+ IAAGY + LA+
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564
Query: 222 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 278
+ V+S G L K EK+ E+ ++ L VV VAAG +H+ + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------EKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +WG+ YG LG+G E VP V+ LN+V AI A GDY + + +DG V+ +G
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671
Query: 339 ESASLGHNAI 348
LG I
Sbjct: 672 IRGQLGRRNI 681
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 34/333 (10%)
Query: 29 LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 74
L+ FL L+ +ENS+ + AG H++A+ G V+++G N GQ
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73
Query: 75 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 134
LG+GT ++ P ++ L+ ++ +AG ++ + G V+ +G ++G+ + V
Sbjct: 74 LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129
Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
+ T+P V+ LKNI + A G F+ + +G V+ + N LG + P
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ G + VV ++AG + LAL + V+S G G+LG+ R E + +
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGN--RPTEDYTVSVP-V 238
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
++ L V+ ++AG +H+ + +DG V WG G +G + +P ++ LN V A
Sbjct: 239 RVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI--IEKNGKIDNSYIPVRIRWLNKVVA 296
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
I A G + + +DG V+ +G LG N
Sbjct: 297 I--AAGYRHSIALKDDGTVWVWGHNSYGVLGSN 327
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 39/307 (12%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+AV S G V+++G N+ G+LG G+ + P ++ L+ ++ +AG ++
Sbjct: 149 AGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLK--DVVAVSAGLYHSLA 206
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+++G + GE V+ P V+ L ++ + A G F + L+++G
Sbjct: 207 LKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISA--GGFHSIALNKDGA 264
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN--IPV--------VQIAAGYCYLLALAC 219
V+ WG G E N G ++N IPV V IAAGY + +AL
Sbjct: 265 VWI--WG-----GGIIEKN--------GKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKD 309
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+ V+ G G LG S E H L Q + L V VAAG H+ + ++G
Sbjct: 310 DGT---VWVWGHNSYGVLG--SNVGE-HSFLPVQVKGLK-NVVAVAAGRLHSVALTKNGT 362
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WG +G LG N ++P V+ L++V AI A G T + DG V+S+G
Sbjct: 363 IWAWGNNAFGQLGRENNSFSLNLPYKVKWLDNVVAI--AAGGSHTLAIKRDGTVWSWGAN 420
Query: 339 ESASLGH 345
LG+
Sbjct: 421 NKGQLGN 427
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 21/293 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+S+G N G+LG+ TE+ P+R +I +AG ++
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G V+ +G E + + + P + L VV A G + L +G
Sbjct: 259 LNKDGAVWIWGGGII-EKNGKIDNSYI---PVRIRWLNK--VVAIAAGYRHSIALKDDGT 312
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ WG+++ LG + + P + G L+N VV +AAG + +AL + ++
Sbjct: 313 VWV--WGHNSYGVLGSNVGEHSFLPVQVKG-LKN--VVAVAAGRLHSVALTKNGT---IW 364
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG + L + + L+ V +AAG H + +DG V +WG
Sbjct: 365 AWGNNAFGQLGR--ENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANN 421
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
G LG+G + +P V+ LN KA+ V G + V +DG V+ +G ES
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGLN--KAVLVEAGSQHSLAVDKDGTVWVWGFIES 472
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+N V+ + G+ T + +G V+ + + +LG+ T + P + G + VV
Sbjct: 40 ENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLKD---VVA 96
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
++AG + LAL S + G +G R + + ++ L+ +V A
Sbjct: 97 VSAGTFHSLALKKDGS--------VWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIA 148
Query: 267 GAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
W ++ VG DG V WG +G LG G+ + +VP V+ L DV A V+ G Y +
Sbjct: 149 AGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVA--VSAGLYHSLA 206
Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQVC 354
+ DG V+S+G E LG+ D V
Sbjct: 207 LKRDGTVWSWGYNEDGELGNRPTEDYTVS 235
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQA 100
N++ +A G HS AVT G ++++ G++S G LGHG W P+ + L+GIR+
Sbjct: 360 NTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSV 419
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G T L++ AGQ++ FG +FG +G + + V P+ VESLK + V+ A G +
Sbjct: 420 ACGVWHTALVTSAGQLFTFGDGTFGVLGHGDK--RSVALPKEVESLKGLKTVRVACGVWH 477
Query: 161 TAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVP-TCVAALVDYNFKQVAC 536
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G+ +AL V+++G L G+LG R D K P L+E +L +A GA+
Sbjct: 537 GHTLTVALTIN---GRVFTMGSSLYGQLGD-VRADGKLPGLVEG-RLWEAFVEEIACGAY 591
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H AV+ V TWG G G LGHG+ + P +V+AL + + VA G T +
Sbjct: 592 HVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAI 648
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 142/311 (45%), Gaps = 26/311 (8%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G V+ +G S G G + P+ + S + + A G L++ G+V+ +G
Sbjct: 275 GDVFLWG-ESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGD 333
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 180
+S G +GV V P+LVE+L A G + + ++ G ++T WG+
Sbjct: 334 ESGGRLGHGVDVD--VAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFT--WGDGTHS 389
Query: 181 ---LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
LGH + + P + G LE I V +A C + A S +++ G G G L
Sbjct: 390 YGLLGHGNDISHWTPKRVGGPLEGIRVSSVA---CGVWHTALVTSAGQLFTFGDGTFGVL 446
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWG 286
GHG + P+ +E L L+ V VA G WH A V G G++ TWG G
Sbjct: 447 GHGDKRSVALPKEVES--LKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDG 504
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LGHG++E + VP V AL D VA G T ++ +G V++ G LG +
Sbjct: 505 DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLG-D 563
Query: 347 AIADGQVCSLL 357
ADG++ L+
Sbjct: 564 VRADGKLPGLV 574
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 29/270 (10%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD- 112
H+ VTS G +++FG + G LGHG P+ + SL+G++ ++ A G T + +
Sbjct: 425 HTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEV 484
Query: 113 ----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+G+++ +G G +G + KLV P V +L + Q A G+ T
Sbjct: 485 MVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV--PTCVAALVDYNFKQVACGHTLTV 542
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L+ GRV+T +LG + P + G L V +IA G ++ L +
Sbjct: 543 ALTINGRVFTMGSSLYGQLG-DVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAK-- 599
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVGQD 277
VY+ G G G+LGHG D P L+E + ++ V +G H V G D
Sbjct: 600 -TEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICLHKWVSGAD 658
Query: 278 GRVCT-------WGWGRYGCLGHGNEECES 300
+C+ + R+ C G+ C S
Sbjct: 659 QSLCSGCRQPFGFTRKRHNCYNCGHAFCHS 688
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3990 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4049
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4050 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4107
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4108 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4165
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4166 TVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWG 4223
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4224 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4283
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 4284 DGTTNAIQRPRLVAAL 4299
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ GV GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4013 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4070
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4071 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4126
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4127 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4186
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4187 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4232
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4047 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4106
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4107 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4164
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4165 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4220
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4221 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4279 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2992 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3051
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3052 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3108
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3109 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3167
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3168 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3223
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3224 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3283
Query: 339 ESASLGH 345
+ G+
Sbjct: 3284 DHGQQGN 3290
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2949 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3008
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3009 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3067
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3068 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3123
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3124 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3182 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3238
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3112
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3113 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3170
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3171 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3222
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3223 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3279
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3316
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTF 324
N++C+ P + L+ + +A G +F
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3201 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3255
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3256 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3313
Query: 155 AIGN 158
A G+
Sbjct: 3314 ACGS 3317
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4002
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4003 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4061
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L + + VA G + V+ GD+Y++G G
Sbjct: 4062 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4121
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4122 GRLGHSDSED 4131
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3264 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3321
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3817 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3874
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L + VV IAAG + AC + +++ G G G+LGH
Sbjct: 3875 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 3930
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 3931 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 3990
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P + +L + I V G + +++ G VY++G G+ LGH
Sbjct: 3991 KTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4036
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 152/320 (47%), Gaps = 17/320 (5%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3785 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3844
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 3845 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 3902
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 3903 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 3961
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L M V+S G G GKLG G K P I+ L L + V G+ + +
Sbjct: 3962 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKTPMKIDS--LTGLGVIKVECGSQFSVALT 4018
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV--- 332
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG +
Sbjct: 4019 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVF 4078
Query: 333 ------YSFGCGESASLGHN 346
+S G GE + G N
Sbjct: 4079 QWGLPRWSLGLGEVYTWGDN 4098
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 20/305 (6%)
Query: 49 IAGPGHSIAVTSKGVV--------YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
+ GP H +++S GV + S+S P I SL ++++
Sbjct: 402 VNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKSTTLAPMLIHSLSSRKMVKL 461
Query: 101 AA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQA 154
AA + +S G+V+++G G +G T + P ++ + VV
Sbjct: 462 AAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG--DTTYLEEPTMIAAFNGKQAGKHVVHI 519
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G+ ++A ++ +G +YT+ GN RLGH + + P L+ L+ + VV +A G
Sbjct: 520 ACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM-LVTALKGLKVVDVACGSGDA 578
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA +G V+S G G GKLG G K P+L+E+ Q L++ V V G+ + +
Sbjct: 579 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI--VKVCCGSQFSVAL 635
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG+V TWG G LGHG +E PK++ L K + VA G +++DG+V+S
Sbjct: 636 TKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 695
Query: 335 FGCGE 339
+G +
Sbjct: 696 WGSND 700
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 27/294 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G+ ++ AAG +
Sbjct: 3851 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 3910
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ +G+++ +GK +G +G +L P+LV++L+ V+ A G+ T L+ +
Sbjct: 3911 ITASGELFTWGKGRYGRLGHGDSEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDD 3968
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL SG AVY
Sbjct: 3969 DMVWSWGDGDYGKLGRGGSDGCKTPMK-IDSLTGLGVIKVECGSQFSVALT--KSG-AVY 4024
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-------- 279
+ G G +LGHGS + PR ++ Q + + +A G+ H +DGR
Sbjct: 4025 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082
Query: 280 ---------VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
V TWG G LG G P++V AL K VA G T
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 149/306 (48%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L ++ +
Sbjct: 2764 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 2823
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2824 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKAKRIRDIACGSSH 2881
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 2882 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 2940
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2941 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2996
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 2997 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3056
Query: 340 SASLGH 345
G+
Sbjct: 3057 HGQQGN 3062
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G++YA
Sbjct: 2727 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 2786
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 2787 CGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2845
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + A+ S +YS G G G+
Sbjct: 2846 DDGKLGHFSRMNCDKPR-LIEALKAKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 2901
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 2902 LGHGDNTTQLRPKLVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3010
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2825 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAA 2884
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G + T L+ E
Sbjct: 2885 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 2942
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2943 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2994
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 2995 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3051
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3088
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 24/267 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
P +SL + + Q +++S +G VY Q K T +P L+
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 451
Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
SL + +V+ A G + A LS G V+++ G+ RLGH EP + G
Sbjct: 452 SLSSRKMVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGK 510
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
VV IA G Y A+ +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 511 QAGKHVVHIACGSTYSAAITVDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 567
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 568 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VY++G G++ LGH
Sbjct: 628 GSQFSVALTKDGQVYTWGKGDNQRLGH 654
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 97/237 (40%), Gaps = 58/237 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVTAD 3808
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3809 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSW 3868
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 3869 GEAEDGKLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLG 344
LGHG+ E + PK+V AL + I VA +GD T +++D V+S+G G+ LG
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 3983
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2973 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3027
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3028 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3085
Query: 155 AIGN 158
A G+
Sbjct: 3086 ACGS 3089
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P LI + + H + +G V +WG G G LGHG+ P ++ A
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAA 506
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
N +A +H+A G + ++ DG++Y++G G LGH + D
Sbjct: 507 FNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSED 553
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3036 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAW 3095
Query: 111 SDAG---------QVYAFGKDSFGEAEYGVQ 132
+ ++ +DS G + GVQ
Sbjct: 3096 TTVDVTTPSVHEPVLFQTARDSLGASYLGVQ 3126
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 86 PRPIRSLQGIRIIQAAA-GAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ + +L +I+ AA G+ L ++ +VY++G G +G TK P L+
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLI 561
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
++LK ++ G ++A +S G +YT+ GN RLGH T + + P ++ L +
Sbjct: 562 QALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP-TMISALSDEH 620
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
++++A G Y L C S VYS G G GKLG G K PRLIE+ Q N++ V
Sbjct: 621 IIKVACGSFYAHTL-CITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQ--NVKIVQ 677
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V GA + + +DG V TWG G LGH EE P++V+ L D K + V+ G
Sbjct: 678 VYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHV 737
Query: 324 FVVSEDGDVYSFGCGESASL 343
+++ G+VY +G E+ +
Sbjct: 738 LALTDQGEVYGWGKNENKQI 757
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T VYS+G+ G+LGHG T + P I++L+G II G + IS
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 171
G +Y +G+ ++G +G L +P ++ +L + +++ A G+F+ T ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LG P L+ L+N+ +VQ+ G + +AL+ VY+ G
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G KLGH + + + P ++E L + + V V+ G H + G V WG +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+E P++++AL K + V G +F ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G +S A+++ G +Y++G + G+LGHGT E+ P I +L II+ A G+ T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
I+ G+VY++G +G+ G G+KL P+L+E L+N+ +VQ G F+ LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G +LGH TE N P ++ L + VV ++ G ++LAL Q VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G ++ S + PRLIE +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ +L + I Q ++++ G+V+ S + PQ + +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTA 509
Query: 146 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
L + V++ A G + A L+++ VY++ G+ RLGH EP L+ L+
Sbjct: 510 LDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
++ + G Y A++ + A+Y+ G G G+LGHG+ D P +I ++ V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ H + G+V +WG G YG LG G + +P++++ L +VK + V G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
+ +SEDG VY++G GE LGH
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGH 707
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A++ G VY++G +LGH T E P + L+ +++ + G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++D G+VY +GK+ E + ++L V P+L+E+LK VV
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCC--------- 784
Query: 166 REGRVYTFSWGND 178
G +F+W +D
Sbjct: 785 --GPAQSFAWTDD 795
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + +D V +WG G G LGHG+ + P ++QAL I V G + +S +
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 330 GDVYSFGCGESASLGHNAIAD 350
G +Y++G G LGH D
Sbjct: 586 GALYTWGRGNYGRLGHGTAED 606
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4108
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4166
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4167 TVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4284
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 4285 DGTTNAIQRPRLVAAL 4300
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ GV GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4014 GA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 4072 KLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 4127
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 4128 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4221
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTF 324
N++C+ P + L+ + +A G +F
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4003
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L + + VA G + V+ GD+Y++G G
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 341 ASLGHNAIAD 350
LGH+ D
Sbjct: 4123 GRLGHSDSED 4132
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|408500850|ref|YP_006864769.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465674|gb|AFU71203.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1184
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 159/342 (46%), Gaps = 44/342 (12%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTM 108
G+S+AV S G Y++G+N GQLG+GTT ++ P P+ G + +QAAAG ++
Sbjct: 690 GYSLAVGSDGKAYAWGNNKYGQLGNGTTTQQSTPVPVPKPAGTPMDFTYMQAAAGGHHSL 749
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVL 164
I G VYA+G + G + G ++P V N + +Q + G + + L
Sbjct: 750 AIGSDGYVYAWGNNDHG--QLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSAGVWSSTAL 807
Query: 165 SREGRVYTFSWGNDARLGHHTE------PNDV-EPHPLLGTLENIPVVQIAAGYCYLLAL 217
+G VYT WG+ +HTE P V +P G VQI+ + + +AL
Sbjct: 808 GADGTVYT--WGSLQSGWNHTESSPQTVPTTVKDPSDASGVFH---AVQISTHWSFDMAL 862
Query: 218 ACQPSGMAVYSVGCGLGGKLGH----GSRTDEKHP---RLIEQFQLLN-----LQPVVVA 265
VY+ G G+LG+ G+ T HP R+ Q L+ V V+
Sbjct: 863 GQD---GYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQ---ALNDVKAIHVAT 318
AG HA +G+DG +WG G LG+G E+V P VQ V A+ V+
Sbjct: 920 AGVLHALAIGEDGNTWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQVSA 979
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLS 360
G Y + VV DG+ +S+G LG N+ +D + +F S
Sbjct: 980 GSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSDRTIPGKVFAS 1021
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 26/282 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 102
QA AG HS+A+ S G VY++G+N GQLG+ T P P +G++ IQ +A
Sbjct: 740 QAAAGGHHSLAIGSDGYVYAWGNNDHGQLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSA 799
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 161
G + + G VY +G G + T+ + +F VQ + F
Sbjct: 800 GVWSSTALGADGTVYTWGSLQSGWNHTESSPQTVPTTVKDPSDASGVFHAVQISTHWSFD 859
Query: 162 AVLSREGRVYTFSWGNDARLGHH----TEPNDVEPHP--LLGTLEN-------IPVVQIA 208
L ++G VYT+ + + +LG++ T P P + + ++ + VQ++
Sbjct: 860 MALGQDGYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHP---RLIEQFQLLNLQPVV 263
AG + LA+ + +S G G+LG+G+ T E +P R+ + V
Sbjct: 920 AGVLHALAIGEDGN---TWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQ 976
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
V+AG++ + VV DG +WGW YG LG + ++P V
Sbjct: 977 VSAGSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSDRTIPGKV 1018
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 37/284 (13%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG----IRIIQAAA 102
Q AG S A+ + G VY++GS SG H + + P ++ +Q +
Sbjct: 796 QVSAGVWSSTALGADGTVYTWGSLQSG-WNHTESSPQTVPTTVKDPSDASGVFHAVQIST 854
Query: 103 GAGRTMLISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKN--------IF 150
M + G VY +G ++ G+ + G T +P V + +
Sbjct: 855 HWSFDMALGQDGYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLK 914
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE------NI 202
VQ + G + +G T+SWG +A LG+ T + +PL ++ +
Sbjct: 915 AVQVSAGVLHALAIGEDGN--TWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTV 972
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLN--- 258
VQ++AG L+L G +S G GKLG S +D P ++ Q +
Sbjct: 973 TAVQVSAGS--YLSLVVDTDGN-TWSWGWNSYGKLGDNSTSDRTIPGKVFASAQSTSSAG 1029
Query: 259 --LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
L ++AG + ++ +G DG WG YG LG+G E+
Sbjct: 1030 PWLNAAQISAG-YFSSAIGTDGYAKAWGRNNYGQLGNGTTSGEN 1072
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 431
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ +GQ++ FG +FG +G + K V+ P+ +ESLK + VQAA G + TA +
Sbjct: 432 AVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 489
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + + P ++ +E P Q+A G+ +
Sbjct: 490 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVE--PNCQVACGHSMTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL+ SG VY++G + G+LG+ ++ D K P +E +L +A GA+H AV+
Sbjct: 548 ALS--RSGH-VYTMGSCVYGQLGN-TQADGKLPIRVEG-KLSKSFVEEIACGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + P +V+AL D + +A G T +
Sbjct: 603 SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 29/304 (9%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ GSN G + P+ + S + + A G L++ G+V+++G++S
Sbjct: 287 VHQVGSN------FGVKMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEES 340
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARL 181
G +GV V P+L+ESL N + A G + T ++ G +YT+ G N L
Sbjct: 341 GGRLGHGVDSD--VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLL 398
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + + P + G LE I V I+ G + + S +++ G G G LGHG
Sbjct: 399 GHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGALGHGD 455
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYG 289
R PR IE L L+ V A G WH A V + G++ TWG G G
Sbjct: 456 RKSVSLPREIE--SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 513
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGHG++E + VP V L + VA G T +S G VY+ G LG N A
Sbjct: 514 RLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTVALSRSGHVYTMGSCVYGQLG-NTQA 571
Query: 350 DGQV 353
DG++
Sbjct: 572 DGKL 575
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR I SL+G+R +QAA G T +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 486
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + +KLV P V +L Q A G+
Sbjct: 487 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTCVVTLVEPN-CQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T LSR G VYT +LG +T+ + P + G L V +IA G ++ L
Sbjct: 544 SMTVALSRSGHVYTMGSCVYGQLG-NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S V++ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 603 ---SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 45 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
N Q G ++A++ G VY+ GS GQLG+ + + R L + + A GA
Sbjct: 536 NCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGA 595
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ +V+ +GK + G +G T +P LVE+LK+ V A G FTA +
Sbjct: 596 YHVAVLTSRTEVFTWGKGANGRLGHG--DTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 119 bits (297), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
H+ +T G ++++G+N+SGQLGHG + + P+R SL+ I+ + G T++I
Sbjct: 1205 HAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVID 1264
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+ +Y++G +G+ +GV P+ +E + A G + T VL G ++
Sbjct: 1265 RSFHIYSWGNGKYGQLGHGVSTPH--NLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLF 1322
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGM 224
F +LG ND++ H + T N + A + + C + S
Sbjct: 1323 AFGSNEHGQLGL----NDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHG 1378
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VYS G G+LGHGS ++P+LI+ + N++ + G +H V V WG
Sbjct: 1379 DVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKR--ITCGPYHTVVTTDLDSVYCWG 1436
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-------DGDVYSFGC 337
G + CLG G+ + E VPK+V+ + + V G Y T +++ G+VY G
Sbjct: 1437 QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGS 1496
Query: 338 GESASLG 344
E LG
Sbjct: 1497 SEHGKLG 1503
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 33/308 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--------SLQGIRI 97
S G H++ + S G +++FGSN GQLG + P P R + Q R+
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHL-PIPTRVNTADIHHAGQPTRV 1361
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
G ++L + G VY+FG ++ G+ +G T+ P+L++ LK + + G
Sbjct: 1362 TGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG--STESCRYPKLIQGLKGKNIKRITCG 1419
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ T V + VY + G LG + N++ P L+ N V ++ G Y A
Sbjct: 1420 PYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPK-LVELFVNKRVERVVCGL-YHTAT 1477
Query: 218 ACQP-----SGMAVYSVGCGLGGKLGHGS-----RTDEKHPRLIEQFQLLNLQPVVVAAG 267
QP +G VY G GKLG G D+ +P +I N+ V +A+G
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANV--VDLASG 1535
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
A A++ +G + WG G +G +G+G + +P V +L+ K + F+V
Sbjct: 1536 AEFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV-SLSSEK-------NQNQFIVD 1587
Query: 328 EDGDVYSF 335
E G +
Sbjct: 1588 ESGSTITL 1595
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 27/329 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + +YS+G+ GQLGHG + P+ I G +I A G T+++
Sbjct: 1256 GGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVL 1315
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-------LVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++AFG + G + G+ K V + + + + V G+ + +
Sbjct: 1316 RSGGDLFAFGSNEHG--QLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVL 1373
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ G VY+F +LGH + + P + G L+ + +I G + + S
Sbjct: 1374 RTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYHTVVTTDLDS- 1431
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------- 276
VY G G LG GS +E P+L+E F +N + V G +H A + Q
Sbjct: 1432 --VYCWGQGEHMCLGTGSNKNELVPKLVELF--VNKRVERVVCGLYHTATLTQPMGDSNT 1487
Query: 277 DGRVCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
G V G +G LG G + ++ P ++ ++N + +A+G +++ +G
Sbjct: 1488 GGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGA 1547
Query: 332 VYSFGCGESASLGHNAIADGQVCSLLFLS 360
+Y +G G +G+ D + + + LS
Sbjct: 1548 LYMWGAGTHGQIGNGKNQDTWIPTRVSLS 1576
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWG 284
+++ G G+LGHG KH + + L P+++ + G H V+ + + +WG
Sbjct: 1215 LFTWGNNTSGQLGHGLAAG-KHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWG 1273
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+YG LGHG ++PK ++ K +ATG + T V+ GD+++FG E LG
Sbjct: 1274 NGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLG 1333
Query: 345 HN 346
N
Sbjct: 1334 LN 1335
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDY 321
V+ G HAAV+ DG + TWG G LGHG + +S P V++L + ++ G
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258
Query: 322 TTFVVSEDGDVYSFGCGESASLGH 345
T V+ +YS+G G+ LGH
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGH 1282
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 150/308 (48%), Gaps = 9/308 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+++G + G+ + + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y++ +LG +E + +L IP IAAG + AL SG A++ G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG TD P L++ L + + + + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDETDRSDPALLKS--LRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGH + E P+ V L +A G +T V G +YSFG G + LG + +
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTS 333
Query: 350 DGQVCSLL 357
+ + S++
Sbjct: 334 NKKSPSMV 341
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ + +YS+G N GQLG G+ + +E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G ++ +G++ FG+ G+ + P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFGQ--LGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ ++V P + + NI V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 16/286 (5%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR + G T + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ A ++G
Sbjct: 64 GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 241
+ + + +L +I +VQ+A G+ + LAL+ + + +YS G G+LG GS
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ E PR I+ L + +AAG H+ + G + WG ++G LG +E S
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P ++++L K I++ G+ T ++++G V++FG G LGHN+
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V GN T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E +G L+ +V ++ G + LAL + V+S G G++G
Sbjct: 64 GQLGHDKSRKKPEQ---VGALDAQIIVAVSCGEAHTLALNDKGQ---VFSWGHAAHGQIG 117
Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
D + PR I+ L ++Q V VA G H+ + ++ + +WG +YG LG G+E+
Sbjct: 118 VSIAEDYIRVPRNIKS--LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEK 175
Query: 298 -CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
ES P+ +++L+ + H+A G +F ++ G ++ +G + LG N D +L
Sbjct: 176 RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPAL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
++ G V+ FG +G + G +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHG W P+ I +L+G+ + + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ GQ++ FG +FG +G + + ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITTMGQLFTFGDGTFGVLGHGNRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEV 254
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V S+G + G+LG+ R+D K P L+E+ N+ V VA G++H AV+
Sbjct: 314 LT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLTI 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E +P +V+AL D H+A G
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACG 410
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 25/288 (8%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
RP+P+ S + G + L++ G+V+ +G++S G +G + + P+L+E
Sbjct: 67 RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
SL V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184
Query: 203 PVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
V ++ G + L+ Q +++ G G G LGHG+R P+ +E L L+
Sbjct: 185 AVAYVSCGTWHTALITTMGQ-----LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLK 237
Query: 261 PVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ VA G WH A + + G++ TWG G LGHG++E P V +L
Sbjct: 238 TISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLI 297
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
D +A G T ++ G V S G LG N +DG++ L+
Sbjct: 298 DYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLG-NPRSDGKIPCLV 344
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + G +A++++ G V+T+ + RLGH + + + HP L
Sbjct: 65 VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
+E++ V + C + +Y+ G G G LGHG P+ I
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRI-AG 179
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V+ G WH A++ G++ T+G G +G LGHGN E S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239
Query: 315 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGH 345
VA G + T + E G ++++G G+ LGH
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH 281
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 373 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHT 432
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
++++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 433 VIVTSAGQLFTFGDGSFGVLGHGDRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEV 490
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + + P + L Q+A G+C +
Sbjct: 491 MAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHCLTV 549
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 550 ALTT--SGH-VYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEI-SCGAYHVAVLT 604
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHGN + ++ P +V+AL D + +V G T +
Sbjct: 605 SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAI 655
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L+S G++Y++G++S G +GV V P+L+++
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDA 361
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P L G LE
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + + S +++ G G G LGHG R P+ +E L L+
Sbjct: 420 IHVSSISCGPFHTVIVT---SAGQLFTFGDGSFGVLGHGDRESLSVPKEVES--LKGLRT 474
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 475 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALV 534
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG +
Sbjct: 535 EPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NPQADGML 577
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H++ VTS G +++FG S G LGHG E P+ + SL+G+R ++AA G T +
Sbjct: 428 GPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAV 487
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++LV P V +L Q A G+
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 545
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 546 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLT 604
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG+ D+ P L+E + ++ VV AA H +
Sbjct: 605 ---SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIHKWI 661
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 662 SGVDQSMCS 670
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 26 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK--KPDQVGALDAQTIVAVSCGEAHTLAL 83
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+++G + G+ V + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 84 NDKGQVFSWGHAAHGQIGLSV-AEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDI 142
Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
Y SWG + +LG +E + +L IP IAAG + AL SG A++
Sbjct: 143 Y--SWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTM--SG-AIFG 197
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG TD P L++ L Q ++ + G H A + ++G V T+G G
Sbjct: 198 WGRNKFGQLGLNDETDRSAPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ + +YS+G N GQLG G+ ++E PR I+SL GI AAG G
Sbjct: 125 QVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGG 184
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G ++ +G++ FG+ G+ ++P L++SL++ ++ G TA L+
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQ--LGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALT 242
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 243 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 299
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 300 IYSFGLGGNGQLGTGSTSNRKSP 322
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG V+S+G + GQ+G E+ R PR I+SL I+I+Q A G ++
Sbjct: 76 GEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLA 135
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +Y++G++ +G+ G + K ++P+ ++SL I A G + L+ G
Sbjct: 136 LSKESDIYSWGQNQYGQLGLGSE-IKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGA 194
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + E + P LL +L + ++ I G + AL + V+
Sbjct: 195 I--FGWGRNKFGQLGLNDETDRSAP-ALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 248
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 249 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 306
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G+ P V+
Sbjct: 307 GNGQLGTGSTSNRKSPFTVK 326
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 14/266 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
PR + G+ T+ + D G VY G + G+ + K P V
Sbjct: 8 EPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK----PDQVG 63
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
+L +V + G T L+ +G+V FSWG+ A ++G + + + +L +I
Sbjct: 64 ALDAQTIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI 121
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQP 261
+VQ+A G+ + LAL+ + +YS G G+LG GS E PR I+ L +
Sbjct: 122 QIVQVACGHHHSLALSKESD---IYSWGQNQYGQLGLGSEIKKESAPRHIKS--LAGIPF 176
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
+AAG H+ + G + WG ++G LG +E S P ++++L K IH+ G+
Sbjct: 177 AHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGED 236
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNA 347
T ++++G V++FG G LGHN+
Sbjct: 237 HTAALTKEGGVFTFGAGGYGQLGHNS 262
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAA 240
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
++ G V+ FG +G + G T +P+ V L V Q A G T A + G
Sbjct: 241 LTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 298
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
R+Y+F G + +LG + N P + G
Sbjct: 299 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 16/228 (7%)
Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVE 191
++V P+ + N V G+ T + +G VYT + +LGH +P+ V
Sbjct: 4 EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKPDQV- 62
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRL 250
G L+ +V ++ G + LAL + V+S G G++G D + PR
Sbjct: 63 -----GALDAQTIVAVSCGEAHTLALNDKGQ---VFSWGHAAHGQIGLSVAEDYIRVPRN 114
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALN 309
I+ L ++Q V VA G H+ + ++ + +WG +YG LG G+E + ES P+ +++L
Sbjct: 115 IKS--LYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLA 172
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ H+A G +F ++ G ++ +G + LG N D +LL
Sbjct: 173 GIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALL 220
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 150/308 (48%), Gaps = 9/308 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+++G + G+ + + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
Y++ +LG +E + +L IP IAAG + AL SG A++ G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG TD P L++ L + + + + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDETDRSDPALLKS--LRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LGH + E P+ V L +A G +T V G +YSFG G + LG + +
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTS 333
Query: 350 DGQVCSLL 357
+ + S++
Sbjct: 334 NKKSPSMV 341
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ + +YS+G N GQLG G+ + +E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G ++ +G++ FG+ G+ + P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFGQ--LGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ ++V P + + NI V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+YS G G G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 16/286 (5%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR + G T + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ A ++G
Sbjct: 64 GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 241
+ + + +L +I +VQ+A G+ + LAL+ + + +YS G G+LG GS
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ E PR I+ L + +AAG H+ + G + WG ++G LG +E S
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P ++++L K I++ G+ T ++++G V++FG G LGHN+
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V GN T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E +G L+ +V ++ G + LAL + V+S G G++G
Sbjct: 64 GQLGHDKSRKKPEQ---VGALDAQIIVAVSCGEAHTLALNDKGQ---VFSWGHAAHGQIG 117
Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
D + PR I+ L ++Q V VA G H+ + ++ + +WG +YG LG G+E+
Sbjct: 118 VSIAEDYIRVPRNIKS--LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEK 175
Query: 298 -CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
ES P+ +++L+ + H+A G +F ++ G ++ +G + LG N D +L
Sbjct: 176 RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPAL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
++ G V+ FG +G + G +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 421 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAV 480
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 481 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGH 538
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG ++ + P+ + G L V +IA G ++ L
Sbjct: 539 SLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLT 597
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H
Sbjct: 598 ---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWA 654
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 655 SGMDQSMCS 663
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH 394
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 472
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 531
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 532 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 586
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 635
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 408 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAV 467
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 468 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGH 525
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG ++ + P+ + G L V +IA G ++ L
Sbjct: 526 SLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLT 584
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H
Sbjct: 585 ---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWA 641
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 642 SGMDQSMCS 650
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 280 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 337
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH
Sbjct: 338 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH 381
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 13/292 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++ +T G V+S G+N QLGH ++ +P + L RI + + G
Sbjct: 37 SQVTMGENHTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGN 94
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++ GQ++ +G DS G+ G GT P++++SL +VQ + G + L+
Sbjct: 95 HTLAFNEWGQLFGWGSDSHGQL--GFNGTT-QPLPKIIKSLATFHIVQISCGKNHSLALT 151
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G +Y++ D +LG ++ E P L+ +L IP+ IA G + AL+ SG
Sbjct: 152 NNGELYSWGGNYDGQLGLGMR-SEYEKQPTLIKSLLGIPIAFIACGSNHSFALS--KSG- 207
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
A+Y G G+LG ++ HP ++ + + ++ +A G +A + DG V T G
Sbjct: 208 AIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVK--YIACGEDFSAFLSADGGVFTCG 265
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
G YG LGHG+ E +P+ + L V+ G +T +V G VYSF
Sbjct: 266 AGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 20/293 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS G+LG G E + PI + Q G T++++ +G+V++ G
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ + + Q TK P+ VE L + + + G T + G++ F WG+D+
Sbjct: 61 NDLDQLGHKKQRTK----PEKVEGLDFYRITKISCGGNHTLAFNEWGQL--FGWGSDSHG 114
Query: 180 RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LG + +P P ++ +L +VQI+ G + LAL + +YS G G+LG
Sbjct: 115 QLGFN---GTTQPLPKIIKSLATFHIVQISCGKNHSLALT---NNGELYSWGGNYDGQLG 168
Query: 239 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G R++ EK P LI+ LL + +A G+ H+ + + G + WG YG LG +EE
Sbjct: 169 LGMRSEYEKQPTLIKS--LLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEE 226
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ P ++ L ++ ++A G+ + +S DG V++ G G LGH + ++
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSN 279
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+T+ G +YS+G N GQLG G +E E +P I+SL GI I A G+
Sbjct: 139 QISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSN 198
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G +Y +GK+++G+ + KL P +++L++I V A G F+A LS
Sbjct: 199 HSFALSKSGAIYGWGKNTYGQLGLNDEENKL--HPTQLKTLRSIRVKYIACGEDFSAFLS 256
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P ++ L V Q++ G + LAL PS
Sbjct: 257 ADGGVFTCGAGMYGQLGHGSTSNEILPRKIM-ELMGSTVTQVSCGKRHTLALV--PSRGR 313
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VYS G G GG+LG +T+ P+++
Sbjct: 314 VYSFGLGGGGQLGTRVKTNCSTPQVV 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS A++ G +Y +G N+ GQLG E + P +++L+ IR+ A G + +
Sbjct: 196 GSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
S G V+ G +G+ +G +++ P+ + L V Q + G T A++ GR
Sbjct: 256 SADGGVFTCGAGMYGQLGHGSTSNEIL--PRKIMELMGSTVTQVSCGKRHTLALVPSRGR 313
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG----------------TLENIPVVQIAAG 210
VY+F G +LG + N P +LG T EN+ V I +G
Sbjct: 314 VYSFGLGGGGQLGTRVKTNCSTPQVVLGPWVSPSGVPVITDKKKTSENVLVTHIFSG 370
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 153/285 (53%), Gaps = 24/285 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +YS+G +++ G LGHG W P+ + +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
LI+ GQ++ FG SFG +G K V+ P+ VESL + + A G + TA
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 163 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+++R G+++T+ G+ RLGH + ++P + TL + ++A G+
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL SG V S+G + G+LG+ +D + P L+E +++ Q + +A G++H AV+
Sbjct: 314 VALTT--SGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVIQIACGSYHVAVL 368
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP +V+ L D ++A G
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACG 413
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 132/301 (43%), Gaps = 29/301 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L+ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V A G F T ++ G +Y SWG N LGH + P + G LE
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELY--SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEG 183
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V ++ G + + S +++ G G G LGHG +PR +E L L+
Sbjct: 184 LQVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKT 238
Query: 262 VVVAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ VA G WH A + + G++ TWG G LGHG++E P V L
Sbjct: 239 IAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATL 298
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF--QYLQ 366
D VA G T ++ G V S G LG N +DG++ L+ I Q +Q
Sbjct: 299 IDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLG-NPHSDGRIPCLVEDKIVGEQVIQ 357
Query: 367 I 367
I
Sbjct: 358 I 358
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 18/307 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
HSIA+T+KG ++G+ +LGHG++ +E+ PR I SL+G R+ A G G T+ +
Sbjct: 221 HSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALI 279
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
++G++YA+G S G G + + S+ + G + LS +GR Y
Sbjct: 280 ESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAY 339
Query: 172 TFSWGNDARLGH-HTEPN----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+ N + GH HT ++E E V AAG + L C SG V
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGG-WEHTLFCTASGR-V 397
Query: 227 YSVGCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
YS GCG LGHG P ++ + + V VA G H+ V +G
Sbjct: 398 YSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANG 457
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
RV TWG G G LGHG+EE +P +V+ ++ K G T ++ D ++++ G G
Sbjct: 458 RVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQG 517
Query: 339 ESASLGH 345
+S LGH
Sbjct: 518 DSGRLGH 524
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR----SLQGIRIIQAAAGAGR 106
G GH++A+ G +Y++G+ S+G+LG G T + R P R S+ +R GA
Sbjct: 271 GLGHTLALIESGELYAWGNGSNGRLGLGDTND--RSSPTRSNGASIAPVRFRHIFCGASH 328
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-------FVVQAAIGNF 159
++ +S G+ YA+GK++ G+ +G + Q +ES ++ FVV AA G
Sbjct: 329 SLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTI--QEIESFRDTEEGEEEEFVVYAAGGWE 386
Query: 160 FTAVLSREGRVYTFSWG-NDAR-------LGHHTEPNDVEP---HPLLGTLENIPVVQIA 208
T + GRVY+ G D+R LGH ++P L T E VV++A
Sbjct: 387 HTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEE--VVKVA 444
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G+ + LA+ VY+ G G GKLGHG P L+ ++ AG
Sbjct: 445 CGWDHSLAVTANGR---VYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKD--AKAGC 499
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
H + D + T G G G LGHG+ + P ++
Sbjct: 500 EHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-------IIQAAAG 103
G HS+ ++ G Y++G N+ GQ GHG T ++W + I S + ++ AA G
Sbjct: 325 GASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGG 384
Query: 104 AGRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQAA 155
T+ + +G+VY+ G KDS V G P V++L + VV+ A
Sbjct: 385 WEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVA 444
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + ++ GRVYT+ G + +LGH E + P L+ ++ V AG + +
Sbjct: 445 CGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIP-TLVRCMDGKKVKDAKAGCEHTV 503
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L +++ G G G+LGHG K P IE F
Sbjct: 504 FLTYD---HELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 9/296 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79
Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S D QVY++G FG +G + V +PQ V++L+ + + Q A G+ ++ G
Sbjct: 80 YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V ++ + +LG T + + P + E++ V IAAG + A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+ E VP V+AL D ++ G T ++ +G +Y +G + +G
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 46 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ AG+V ++G++ G+ G L+ PQ +++ +++ V A G TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKMVLVACGWRHTITVSDSGN-- 242
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 283
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298
Query: 284 GWGRYGCLGHGNEECESVPKVV 305
GW ++G +G GN + S P V
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQV 320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 9/255 (3%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72
Query: 157 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G + L
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A+ V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 336 GCGESASLGHNAIAD 350
G + LGH D
Sbjct: 247 GWSKYGQLGHGDFED 261
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ + + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACG 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA C A S +++ G G G LGHG+ PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
VA G T ++ G V++ G LG N +DG+ C
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGRPC 341
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 20/310 (6%)
Query: 41 CRRENS-------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
CRR S QA G HS+ + S G V+S G+NS GQLG ++ RP I++L+
Sbjct: 28 CRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE 87
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVV 152
I+ + G ++ I G+V+++G S G + G++ K ++S P+ ++ L + ++
Sbjct: 88 TQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG--QLGIREFKKLSSIPKKIDELSSFKII 145
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGY 211
Q + G++ + L+++GRV+++ N +LG P+ P + +L+ IP+ Q+AAG
Sbjct: 146 QVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQ-WVKSLDGIPLAQVAAGG 204
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAW 269
+ AL+ SG + Y G G+L + + E+ + +L LQ ++ G
Sbjct: 205 AHSFALSF--SGTS-YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDE 261
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-E 328
H AV+ QDG+V T+G G LG P+VV + V +A G Y T S
Sbjct: 262 HTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSA--VSFSQIACGSYHTLAYSCT 319
Query: 329 DGDVYSFGCG 338
G V SFGCG
Sbjct: 320 TGQVISFGCG 329
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIR-----SLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ Y +G NSSGQLG + R +R SL ++QAA G ++L+ G V+
Sbjct: 1 MYYCWGDNSSGQLGIPAVPRA-KARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVW 59
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+ G +S G+ G + + P +++L+ +V + G + + +EGRV+++ G+
Sbjct: 60 SCGNNSCGQ--LGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGS 117
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
D +LG + L + ++Q++ G+ + +ALA V+S G G+L
Sbjct: 118 DGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA---QDGRVFSWGKNNHGQL 174
Query: 238 GHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC----LG 292
G G + P+ ++ + L VAAG H+ + G ++GWGR L
Sbjct: 175 GLGENVPSQASPQWVKSLDGIPL--AQVAAGGAHSFALSFSG--TSYGWGRNNAGQLALS 230
Query: 293 HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
E E + P + L ++ +++ GD T V+++DG V++FG +S LG I+
Sbjct: 231 GKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLIS 289
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKLPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 31/253 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 421 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAV 480
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 481 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGH 538
Query: 159 FFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVEPHPLLGTLENIPVVQIAAGYCYL 214
T L+ G VYT +LG+ H + PN VE G L V +IA G ++
Sbjct: 539 SLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVE-----GKLHKSFVEEIACGAYHV 593
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAW 269
L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 594 AVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCI 650
Query: 270 HAAVVGQDGRVCT 282
H G D +C+
Sbjct: 651 HRWASGMDQSMCS 663
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH 394
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 28/309 (9%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P P+ +L G +I+QAA G
Sbjct: 47 VAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHC 106
Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 161
+ + D G+ YA+G + +G E E GT+ + P + V Q A G +
Sbjct: 107 LAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHS 166
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
VL++EG V+T+ G P D++ P + G LE + V IA G + LAL
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRV--IAVGAFHNLAL 215
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ +++ G G+LG G P +E L+L V +AAG WH+ + D
Sbjct: 216 T---EDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTALTID 270
Query: 278 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG G +G LG G+++ VP V+ L + V+ G + ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYG 330
Query: 337 CGESASLGH 345
G+ LG+
Sbjct: 331 RGDHGRLGY 339
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 17/287 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V ++GS GQLG G EE+ P + +L + AG+ ++ I D G+++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWNQ 69
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK +SP V++L +VQAAIG + + +GR Y +WG + G
Sbjct: 70 RGTLGHPPE-TKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAY--AWGGN-EYGQ 125
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
E + + +IP+ Q C L Q + +SV + + GH
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQ----RCALKLKVRQVAAGGTHSV---VLTQEGHVWTW 178
Query: 244 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
+ P ++ ++ L+ V V+A GA+H + +D + WG YG LG G+ +
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQ 238
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P V+ L+D+ + +A G + + ++ DG+VY++G GE LG
Sbjct: 239 PRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLG 285
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------PRPIRSLQGIRII 98
QA G H +AV KG Y++G N GQ G +E P P R +++
Sbjct: 98 QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR 157
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
Q AAG +++++ G V+ +G+ + K +++P V+ L+ + V+ A+G
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQ------PWPPGDIKQISTPVRVQGLEKVRVI--AVGA 209
Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
F L+ + V ++WGN+ +LG +P + G L ++ +V IAAG + A
Sbjct: 210 FHNLALTED--VILWAWGNNEYGQLGTGDTQPRSQPIRVEG-LSDLSLVDIAAGGWHSTA 266
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV-VAAGAWHAAVV 274
L VY+ G G G+LG G D+K ++ + +LL + +V V+ G H+ +
Sbjct: 267 LTIDGE---VYAWGRGEHGRLGFG---DDKSSHMVPLKVELLAGEDIVQVSCGGTHSVAL 320
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVP 302
+DGR+ ++G G +G LG+G + P
Sbjct: 321 ARDGRMFSYGRGDHGRLGYGRKVTTGHP 348
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 30/241 (12%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSN-SSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q AG HS+ +T +G V+++G G + +T P ++ L+ +R+I A GA
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQIST-----PVRVQGLEKVRVI--AVGAF 210
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ ++A+G + +G+ G T+ + P VE L ++ +V A G + + L+
Sbjct: 211 HNLALTEDVILWAWGNNEYGQ--LGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALT 268
Query: 166 REGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+G VY + G RLG H P VE L +VQ++ G + +ALA
Sbjct: 269 IDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVE------LLAGEDIVQVSCGGTHSVALAR 322
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA-AGAWHAAVVGQDG 278
++S G G G+LG+G + HP + +NL P+ + G W A V G
Sbjct: 323 DGR---MFSYGRGDHGRLGYGRKVTTGHPMELP----INLPPLSSSRDGRWQAKYVACGG 375
Query: 279 R 279
R
Sbjct: 376 R 376
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+A AV + G G G+LG G ++ P +E + VV AG+ ++ +
Sbjct: 1 MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVV--AGSRNSLAICD 58
Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DGR+ TWGW + G LGH E + ES P V AL K + A G + V + G Y++
Sbjct: 59 DGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAW 118
Query: 336 GCGESASLGHN 346
G E G
Sbjct: 119 GGNEYGQCGEE 129
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3979 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4038
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 4039 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4096
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4097 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4155
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L M V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4156 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKIDS--LTGLGVVKVECGSQFSVALT 4212
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4213 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4272
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4273 GDNDEGQLGDGTTNAIQRPRLVAAL 4297
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G+ ++ AAG +
Sbjct: 4045 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 4104
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ +G+++ +GK +G +G +L P+LV++L+ V+ A G+ T L+ +
Sbjct: 4105 ITASGELFTWGKGRYGRLGHGDSEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDD 4162
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4163 DMVWSWGDGDYGKLGRGGSDGCKIPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4219 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4276
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4277 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4316
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P +L +R +Q G ++ G++YA G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4010
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4011 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4068
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L + VV IAAG + AC + +++ G G G+LGH
Sbjct: 4069 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4124
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 4125 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4184
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P + +L + + V G + +++ G VY++G G+ LGH
Sbjct: 4185 KIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4230
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLISDA 113
+ ++S G VYS S+ P I L +I++ AA + +S
Sbjct: 455 LILSSSGAVYSQNYKST----------TLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSN 504
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+++ + VV A G+ ++A ++ +G
Sbjct: 505 GEVFSWGCGDGGRLGHG--DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGE 562
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + + P ++ + + VV +A G LA +G V+S
Sbjct: 563 LYTWGRGNYGRLGHGSSEDQTTPM-VVTAFKGLKVVDVACGSGDAQTLAVTENGQ-VWSW 620
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+L+E+ Q L++ V V G+ + + +DG+V TWG G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDI--VKVCCGSQFSVALTKDGQVYTWGKGDNQ 678
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG +E PK++ +L K + VA G +++DG+V S+G +
Sbjct: 679 RLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSND 728
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2947 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3006
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G++YA G+ + G G+ + + P+ + +L N + + A+ G L+ +G+V
Sbjct: 3007 EGKIYACGEATNGRLGLGL-SSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 3066 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 3121
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3122 LGEYGRLGHGDNTTQLRPKLVK--VLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDF 3179
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3180 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3236
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 148/306 (48%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L I+ +
Sbjct: 2990 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAV 3049
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3050 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3107
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3166
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3167 DEGF-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3222
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 3223 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3282
Query: 340 SASLGH 345
G+
Sbjct: 3283 HGQQGN 3288
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G+ L+
Sbjct: 3111 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3168
Query: 170 VYTFSWGND--ARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ FSWG+ +LG P ++E L V QI G + LAL S
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3221 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3277
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3314
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 26/268 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
P ++L + + Q +++S +G VY+ Q K T +P L+
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS-------------QNYKSTTLAPMLIH 479
Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
L + +V+ A G + A LS G V+++ G+ RLGH EP ++GT
Sbjct: 480 VLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPK-MIGTFNG 537
Query: 202 IP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
VV +A G Y A+ +Y+ G G G+LGHGS D+ P ++ F+ L
Sbjct: 538 KQAGKHVVHVACGSTYSAAITADGE---LYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGL 594
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 595 KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 654
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VY++G G++ LGH
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQRLGH 682
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3199 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3253
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3254 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3311
Query: 155 AIGN 158
A G+
Sbjct: 3312 ACGS 3315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG E V+ L + VQ+ G L A+
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVT-- 4000
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4001 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G LGHGN P+V+++L V+ + +A G + ++ G+++++G G
Sbjct: 4060 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4119
Query: 341 ASLGHNAIAD 350
LGH D
Sbjct: 4120 GRLGHGDSED 4129
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P LI + + H + +G V +WG G G LGHG+ PK++
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGT 534
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
N +A +HVA G + ++ DG++Y++G G LGH + D
Sbjct: 535 FNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSED 581
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3262 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAW 3321
Query: 111 SDAG---------QVYAFGKDSFGEAEYGVQ 132
+ ++ +DS G + GVQ
Sbjct: 3322 TTVDVTTPSVHEPVLFQTARDSLGASYLGVQ 3352
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 155/288 (53%), Gaps = 21/288 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ A+T+ G +Y++G ++++G LGHG+ W P+ + L+G+++
Sbjct: 339 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 398
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 399 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 456
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 457 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 515
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L SG +++ G + G+LG+ + D ++PRL+E+ +L V V GA+H
Sbjct: 516 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 570
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
AV+ Q G V TWG G G LGHG+ P V+AL D +A G
Sbjct: 571 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 618
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 186
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 266 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 323
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ +P L+ +L V IA G + A+ + + G G LGHGS
Sbjct: 324 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 381
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+ + L LQ V+ G WH A++ G++ T+G G +G LGHGN E S PK V+
Sbjct: 382 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 440
Query: 307 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGH 345
+L ++ I V+ G + T V E G ++++G G+ LGH
Sbjct: 441 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH 488
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 148/283 (52%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W PR I +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + + P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ + + P L+ ++ N + VA G++H +V+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVGD-KITNEHVLQVACGSYHVSVLTS 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E + VP +V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACG 410
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 131/282 (46%), Gaps = 21/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ +G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQ 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+ PR +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
VA G T ++ G V++ G LG N +DG+ C
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGRPC 341
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 32 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
R L G+ Q G H +TS+ V+++G ++G+LGHG E++ P + +
Sbjct: 339 RPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEA 398
Query: 92 LQGIRIIQAAAGAGRTMLI 110
L+ + A GA T I
Sbjct: 399 LKDRSVRHIACGANFTAAI 417
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE 83
G+ + R L + C ++ + +A ++AV T+ GVV + G N SGQ G G +E
Sbjct: 335 GTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDER 394
Query: 84 -WRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 140
RP+++L Q ++ I A+ G + ++D+G Y++G + G+ + TK V P
Sbjct: 395 VMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTK-VHVP 453
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+L+ESLK+ + A++ +AV++ G +Y F + +LG + P L+ E
Sbjct: 454 KLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQ-LVKGFE 512
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+ +A G + + C +G +++ G G+LG G K L+ L N
Sbjct: 513 GTEISMVACGLYH--TIICTATG-GLFACGKNDYGQLGLGHNRQIKVASLV---SLPNEM 566
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
VA+G +H+ VV GR ++G YG LG GN+ ++VP VV + + + G
Sbjct: 567 VSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGC 626
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
Y T ++SE G V+ FG LG+ AD
Sbjct: 627 YHTVLLSEQGQVFVFGRNNKGQLGNRGSADA 657
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E S G H+I T+ G +++ G N GQLG G + + + SL + A+G
Sbjct: 515 EISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQ-IKVASLVSLPNEMVSYVASG 573
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+++++++G+ ++FG++ +G+ G + + V P +V N +V+A G + T +
Sbjct: 574 YYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNV--PNVVALSANTRMVRATCGCYHTVL 631
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGY 211
LS +G+V+ F N +LG+ + + P PL E V +AAG+
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGF 681
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 20/243 (8%)
Query: 113 AGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV--ESLKNIFVVQAAIGNFFTAVLSREGR 169
+G++Y+ G++S+GE G + +TS L + ++ Q A GN AVL+ +G
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIR-----QVASGNETLAVLTNDGV 374
Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V T + G H + + P+ L + V IAA +A SG+A YS
Sbjct: 375 VLTCGLNKSGQCGQGHFDERVMMLRPVQA-LRSQRVKFIAASNGCEHMIALTDSGLA-YS 432
Query: 229 VGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LGH + T + H P+LIE + L+ V+ H+AV+ G + +G
Sbjct: 433 WGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH--HSAVITDSGELYAFGMND 490
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA----SL 343
G LG + + +S P++V+ + VA G Y T + + G + F CG++ L
Sbjct: 491 CGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGL--FACGKNDYGQLGL 548
Query: 344 GHN 346
GHN
Sbjct: 549 GHN 551
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S +G HS+ VT+ G +SFG N GQLG G + P + R+++A G
Sbjct: 568 SYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCY 627
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVL 164
T+L+S+ GQV+ FG+++ G+ L+ P V KN V A G + T+++
Sbjct: 628 HTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLI 687
Query: 165 SREGR 169
R
Sbjct: 688 VERKR 692
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 150/300 (50%), Gaps = 22/300 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS VT+ G +Y+FG N GQLGHG T+ +P ++ L+ ++ A G T+
Sbjct: 43 GDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAA 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+++G +Y+FG G+ +G V P+++E L A G+ F+A ++ G +
Sbjct: 103 TESGHLYSFGCGGDGQLGHGDAEDSHV--PKIIEGLDVQKYKHLACGSDFSAAITENGEL 160
Query: 171 YTFSWGNDAR----LGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
YT WG+ LG TE P + H V ++ GY Y +A+ + +
Sbjct: 161 YT--WGSCGEGQNGLGEDTEIPTRLHLHG--------KVRMVSCGY-YHMAVVTEDG--S 207
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y G GGKLG + +L ++ + + Q VV A GA AVV ++G V T+G
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQL-QKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQ 266
Query: 286 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LG G+ E+ P+ + VKA V+ G+ T V+++ G++Y+FG G LG
Sbjct: 267 GNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLG 326
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 20/275 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+IA T G +YSFG GQLGHG E+ P+ I L + A G+ + I
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAI 154
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G++Y +G S GE + G+ + T++ T L ++ + + G + AV++ +G
Sbjct: 155 TENGELYTWG--SCGEGQNGLGEDTEIPTRLHLHGKVRMV-----SCGYYHMAVVTEDGS 207
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y +LG H + ++ + ++E+ Q+ C A +VY+
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED----QVVVAACGAEFTAVVTKNGSVYT 263
Query: 229 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G G+LG GS E + P I F+ ++ V+ G AV+ + G + T+G GR
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIPLFE--KVKARTVSCGESFTAVITKHGNLYTFGDGR 321
Query: 288 YGCLGHGNEECES---VPKVVQALNDVKAIHVATG 319
+G LG G +EC S P+ V+ N+ V G
Sbjct: 322 HGKLGLG-DECFSNTFKPEKVKRFNNFTVKMVTCG 355
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 34/241 (14%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF------VVQAAIGNFFTAV 163
+ ++G V+ FGK F ++L N F VV + G+ +AV
Sbjct: 8 VPESGAVFTFGKTRF------------------ADNLANKFWIRDDAVVNLSCGDEHSAV 49
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ G++YTF + +LGH + +P ++ L+ V +A G + +A SG
Sbjct: 50 VTANGKLYTFGCNDWGQLGHGNTKSYTKP-SVVKKLKPEKVYMVACGRNH--TIAATESG 106
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+YS GCG G+LGHG D P++IE + + +A G+ +A + ++G + TW
Sbjct: 107 H-LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKH--LACGSDFSAAITENGELYTW 163
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G G G E +P + V+ V+ G Y VV+EDG +Y G E L
Sbjct: 164 GSCGEGQNGLG--EDTEIPTRLHLHGKVRM--VSCGYYHMAVVTEDGSLYMCGEKEGGKL 219
Query: 344 G 344
G
Sbjct: 220 G 220
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
L +F + + V ++ G H+AVV +G++ T+G +G LGHGN + + P VV+ L
Sbjct: 25 NLANKFWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKL 84
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIW 368
K VA G T +E G +YSFGCG LGH D V ++
Sbjct: 85 KPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKII---------EG 135
Query: 369 LNLSSYRHL 377
L++ Y+HL
Sbjct: 136 LDVQKYKHL 144
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGR 106
A G + VT G VY+FG + GQLG G++ E P I + ++ + G
Sbjct: 245 AACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESF 304
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T +I+ G +Y FG G+ G + P+ V+ N V G
Sbjct: 305 TAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 13/301 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ + G HS+ + G VY+ GSNS GQLGH + P + +L +I + G
Sbjct: 37 EIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHN--KPGITPEFVGALDTQKITLVSCGQAH 94
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +++ GQV+A+G G+ G T V P+L++ L + + Q GN LS+
Sbjct: 95 SLAVNEQGQVFAWGAGEEGQLGLGTTETA-VRIPRLIKRLCDHRIAQVMCGNQHCIALSK 153
Query: 167 EGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G+++T+ +LG EP+ + P PL +L IP+ +I AG + AL+ SG A
Sbjct: 154 DGQLFTWGQNTSGQLGLGKGEPSKLFPQPL-KSLAGIPLAKITAGGDHSFALSL--SG-A 209
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
V+ G G+LG D P I + L Q VV ++ G H A + +DG + T+G
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHI---KFLRSQKVVHISCGEEHTAALTKDGGLFTFG 266
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASL 343
G +G LGHG+ E +P+ V L + + G + T + G VY+FGC L
Sbjct: 267 DGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQL 326
Query: 344 G 344
G
Sbjct: 327 G 327
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 21/275 (7%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
C +Q + G H IA++ G ++++G N+SGQLG G E + P+P++SL GI + +
Sbjct: 134 CDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAK 193
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
AG + +S +G V+ +GK+ G + G+ + P ++ L++ VV + G
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNKAG--QLGLNDIQDRAVPCHIKFLRSQKVVHISCGEE 251
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
TA L+++G ++TF G+ +LGH + N++ P +L L V QI G + LA A
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFA- 309
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
PS VY+ GC G+LG G + +K P ++ L +G+ H V
Sbjct: 310 -PSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFL---------SGSIHGTVTK---- 355
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
T G G + L + N++ P+ + +N AI
Sbjct: 356 -ITCG-GDHSFLLYSNDQNSEYPEDFRVINISNAI 388
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 11/286 (3%)
Query: 67 FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
+G GQLG G + PR G + + G ++ + G VY G +S G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ + G +P+ V +L + + G + ++ +G+V+ + G + +LG T
Sbjct: 64 QLGHNKPGI----TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGT 119
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
V L+ L + + Q+ G + +AL+ +++ G G+LG G
Sbjct: 120 TETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS---KDGQLFTWGQNTSGQLGLGKGEPS 176
Query: 246 K-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
K P+ ++ + L + AG H+ + G V WG + G LG + + +VP
Sbjct: 177 KLFPQPLKSLAGIPLAKI--TAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCH 234
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++ L K +H++ G+ T +++DG +++FG G LGH + A+
Sbjct: 235 IKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTAN 280
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 25 GSWKLVLRFLLAGEACCRR-------ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLG 76
GSW + A E RR E SQ G H++A S G VY+FG NS GQLG
Sbjct: 268 GSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLG 327
Query: 77 HGTTEEEWRPRPIRS 91
G + P P+++
Sbjct: 328 TGVLSADKSPYPLKT 342
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 16/316 (5%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T G VYS G+N GQLGH + R + I L + A G
Sbjct: 112 EIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKVACG 169
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 162
A T+ +++ GQ++++G ++ E + G+ L+ P +V +L VVQ A G
Sbjct: 170 AHHTLAVNEWGQLFSWGSNA--EGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ G++Y++ +D +LG T+ N+++P L+ +L +P+ I G + ++A
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPK-LISSLAGVPIAFITCGGYH--SMAISK 284
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
SG AV+ G G+LG + PR ++ Q N + A G + + DG V
Sbjct: 285 SG-AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQ--NAKVCYAACGEEFSVFLTVDGGVF 341
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGES 340
T G G YG LGHGN E +P+ V L ++ G T +V G VY++G G +
Sbjct: 342 TCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA 401
Query: 341 ASLGHN---AIADGQV 353
LG+N ++A QV
Sbjct: 402 GQLGNNITRSVATPQV 417
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 160/327 (48%), Gaps = 26/327 (7%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQ 99
RR + I +S VT K + + +GS G+LG G E+E PR + + I Q
Sbjct: 58 RRLACEPIIAVEYS-TVTDKNM-FCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQ 115
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
A G T+LI+ GQVY+ G + +G+ + +L QL+ L + A G
Sbjct: 116 IACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKVACGAH 171
Query: 160 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLL 215
T ++ G++ FSWG++A +LG +++ N +E PH ++ L VVQ+A G ++L
Sbjct: 172 HTLAVNEWGQL--FSWGSNAEGQLGLNSK-NLIECVPH-MVRALGTSVVVQVACGINHVL 227
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
AL + +YS G G+LG G+ +E P+LI L + + G +H+ +
Sbjct: 228 ALT---NNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISS--LAGVPIAFITCGGYHSMAI 282
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V WG +G LG + ++P+ +Q L + K + A G+ + ++ DG V++
Sbjct: 283 SKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFT 342
Query: 335 FGCGESASLGH----NAIADGQVCSLL 357
G G LGH N I QV L+
Sbjct: 343 CGAGMYGQLGHGNTSNEILPRQVMELM 369
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+T+ G +YS+GSNS GQLG GT + E +P+ I SL G+ I G
Sbjct: 218 QVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGY 277
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M IS +G V+ +GK++FG + G+ T+ P+ +++L+N V AA G F+ L+
Sbjct: 278 HSMAISKSGAVFGWGKNTFG--QLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLT 335
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH N++ P ++ L V QI+ G + L L PS
Sbjct: 336 VDGGVFTCGAGMYGQLGHGNTSNEILPRQVM-ELMGSTVTQISCGKRHTLGLV--PSRGR 392
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ P+++
Sbjct: 393 VYAWGLGGAGQLGNNITRSVATPQVV 418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++AV G ++S+GSN+ GQLG + E P +R+L ++Q A G +
Sbjct: 169 GAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLA 228
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G++Y++G +S G+ G K P+L+ SL + + G + + +S+ G
Sbjct: 229 LTNNGKLYSWGSNSDGQLGLGTD-VKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGA 287
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG + +LG + N P L TL+N V A G + + L V+
Sbjct: 288 V--FGWGKNTFGQLGLNDTRNRNLPRQL-QTLQNAKVCYAACGEEFSVFLTVDG---GVF 341
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G+ G+LGHG+ ++E PR + +L+ ++ G H +V GRV WG G
Sbjct: 342 TCGAGMYGQLGHGNTSNEILPRQV--MELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLG 399
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG+ + P+VV
Sbjct: 400 GAGQLGNNITRSVATPQVVH 419
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A++ G V+ +G N+ GQLG T PR +++LQ ++ AA G ++ ++
Sbjct: 278 HSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVD 337
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T ++ GRVY
Sbjct: 338 GGVFTCGAGMYGQLGHGNTSNEIL--PRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYA 395
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG++ + P + G
Sbjct: 396 WGLGGAGQLGNNITRSVATPQVVHG 420
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++SG LGHG W P+ + L+GI + + G T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 429
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 430 AIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L QIA G+C +
Sbjct: 488 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHCMTV 546
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 547 ALT---TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 601
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + S P +V+AL D + V G
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG R PR +E L L+ V
Sbjct: 419 VSAISCGPWHTAIVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVR 473
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+A G T ++ G VY+ G LG N ADG +
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGML 574
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 659 SGVDQSMCS 667
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G ++A+T+ G VY+ GS GQLG+ + R L + + + GA
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 596
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ +VY +GK + G +G T +SP LVE+LK+ V G FTA +
Sbjct: 597 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
VA G T ++ G V++ G LG N +DG+ C
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGRPC 341
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 9/308 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E QA +G HS+ + S G V++ G NS GQLG RP I++L+ + +
Sbjct: 16 EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNV 75
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ G ++ + G+V+A+G S G+ G + +L +P V++L I ++Q + G
Sbjct: 76 DLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKALAGIKIIQVSCG 134
Query: 158 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
++ + LS++G+V FSWGN++ +LG E E + +LE IP+ Q+AAG +
Sbjct: 135 HYHSLALSQDGQV--FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSF 192
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL+ + S G G+ PR I + L + V ++ G+ H AV+
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGV--VYISCGSEHTAVLT 250
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
QDG+V T+G G LGHG + P++V+ ++ + + + G Y T V V V S
Sbjct: 251 QDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVS-QIDCGSYHTLVYVYTTRQVIS 309
Query: 335 FGCGESAS 342
FG G S +
Sbjct: 310 FGRGPSDT 317
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G + QAA+G ++L+ G V+A G +S G+ G +G P L+++L+ + V
Sbjct: 20 GAELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDL 77
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
+ G + + +GRV+ + G++ +LG E ++ P+ + L I ++Q++ G+
Sbjct: 78 LSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQVSCGHY 136
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ LAL+ V+S G G+LG G ++ P+ ++ + + L VAAG H+
Sbjct: 137 HSLALS---QDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPL--AQVAAGGAHS 191
Query: 272 AVVGQDGRVCTWGWGRYG--CLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSE 328
+ G WG G L N +S P+ + AL ++ ++++ G T V+++
Sbjct: 192 FALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251
Query: 329 DGDVYSFGCGESASLGHNAIADGQ 352
DG V++FG S LGH A+ +
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKR 275
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 26/310 (8%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+N AIA G H++A+ G V+S+G+N+ GQLG+GT + + P ++ L +++A
Sbjct: 393 DNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEA-- 450
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G+ ++ + G V+ +G F E+ + + TK + SP ++ K + + A G +
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 221
VL ++G ++ GND T+ + V L L+NI V+ IAAGY + LA+
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564
Query: 222 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 278
+ V+S G L K +K+ E+ ++ L VV VAAG +H+ + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------KKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +WG+ YG LG+G E VP V+ LN+V AI A GDY + + +DG V+ +G
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671
Query: 339 ESASLGHNAI 348
LG I
Sbjct: 672 IRGQLGRRNI 681
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 34/333 (10%)
Query: 29 LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 74
L+ FL L+ +ENS+ + AG H++A+ G V+++G N GQ
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73
Query: 75 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 134
LG+GT ++ P ++ L+ ++ +AG ++ + G V+ +G ++G+ + V
Sbjct: 74 LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129
Query: 135 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
+ T+P V+ LKNI + A G F+ + +G V+ + N LG + P
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ G + VV ++AG + LAL + V+S G G+LG+ R E + +
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGN--RPTEDYTVSVP-V 238
Query: 255 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
++ L V+ ++AG +H+ + +DG V WG G +G + +P ++ LN V A
Sbjct: 239 RVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI--IEKNGKIDNSYIPVRIRWLNKVVA 296
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
I A G + + +DG V+ +G LG N
Sbjct: 297 I--AAGYRHSIALKDDGTVWVWGHNSYGVLGSN 327
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 66/339 (19%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+S+G N G+LG+ TE+ P+R +I +AG ++
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258
Query: 110 ISDAGQVYAFG--------------------------------------KDS-----FGE 126
++ G V+ +G KD +G
Sbjct: 259 LNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGH 318
Query: 127 AEYGVQGTKLVTSPQL---VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RL 181
YGV G+ + L V+ LKN VV A G + L++ G ++ +WGN+A +L
Sbjct: 319 NSYGVLGSNVGEHSFLLVQVKGLKN--VVAVAAGRLHSVALTKNGTIW--AWGNNAFGQL 374
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G + + L+N VV IA G + LA+ + V+S G G+LG+G+
Sbjct: 375 GRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGT---VWSWGANNKGQLGNGT 429
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES- 300
P ++ V+V AG+ H+ V +DG V WG+ ++ S
Sbjct: 430 YKSSYIPTCVKGLN----NAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSP 485
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+P + LND+ I A G V+ +DG+++ GCG
Sbjct: 486 LPIKIGKLNDITEI--AGGLDYILVLRKDGNIW--GCGN 520
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+N V+ + G+ T + +G V+ + + +LG+ T + P + G + VV
Sbjct: 40 ENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLKD---VVA 96
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
++AG + LAL S + G +G R + + ++ L+ +V A
Sbjct: 97 VSAGTFHSLALKKDGS--------VWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIA 148
Query: 267 GAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
W ++ VG DG V WG +G LG G+ + +VP V+ L DV A V+ G Y +
Sbjct: 149 AGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVA--VSAGLYHSLA 206
Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQVC 354
+ DG V+S+G E LG+ D V
Sbjct: 207 LKRDGTVWSWGYNEDGELGNRPTEDYTVS 235
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 156/333 (46%), Gaps = 23/333 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+++G +G+ + + P+ ++SL ++ +VQ A G+ + LS++ +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158
Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
FSWG + +LG E + +L IP IAAG + AL SG A++
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG TD P L++ L Q ++ + G H A + ++G V T+G G
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 347 AIADGQVCSLLFLSIFQYLQIWLNLSSY-RHLP 378
+ + + S F WL Y RHLP
Sbjct: 331 STINRK-------SPFTVKGNWLTYEDYVRHLP 356
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ ++S+G N GQLG G ++E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G ++ +G++ FG + G+ P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 16/286 (5%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR + G+ T+ + D G VY G +
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ ++G
Sbjct: 64 GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
T + + +L ++ +VQ+A G+ + LAL+ ++S G G+LG G
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLE 174
Query: 243 TDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
++ PR I+ L + +AAG H+ + G + WG ++G LG +E +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P ++++L K IH+ G+ T ++++G V++FG G LGHN+
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
++ G V+ FG +G + G T +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGN 344
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4000 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4057
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L + VV IAAG + AC + +++ G G G+LGH
Sbjct: 4058 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4113
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 4114 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4173
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P + +L + V G + +++ G VY++G G+ LGH
Sbjct: 4174 KIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4219
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 158/325 (48%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3968 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4027
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 4028 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4085
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4086 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4144
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L M V+S G G GKLG G K P I+ L L V G+ + +
Sbjct: 4145 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKIDS--LTGLGVTKVECGSQFSVALT 4201
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4202 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4261
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAI ++ + L
Sbjct: 4262 GDNDEGQLGDGTTNAIQRPRLVAAL 4286
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G+ ++ AAG +
Sbjct: 4034 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 4093
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ +G+++ +GK +G +G +L P+LV++L+ V+ A G+ T L+ +
Sbjct: 4094 ITASGELFTWGKGRYGRLGHGDSEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDD 4151
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V ++ G + +AL SG AVY
Sbjct: 4152 DMVWSWGDGDYGKLGRGGSDGCKIPMK-IDSLTGLGVTKVECGSQFSVALT--KSG-AVY 4207
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4208 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4265
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4266 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4305
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 20/305 (6%)
Query: 49 IAGPGHSIAVTSKGVV--------YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
++GP H +++S GV + S+S P I SL +I++
Sbjct: 425 VSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKSTTLAPMLIHSLSSRKIVKL 484
Query: 101 AA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQA 154
AA + +S G+V+++G G +G + P ++ + VV
Sbjct: 485 AAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG--DATYLEEPTMIAAFNGKQAGKHVVHI 542
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G+ ++AV++ +G +YT+ GN RLGH + + P L+ L+ + VV +A G
Sbjct: 543 ACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM-LVTALKGLKVVDVACGSGDA 601
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA +G V+S G G GKLG G K P+L+E+ Q L++ V V G+ + +
Sbjct: 602 QTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI--VKVCCGSQFSVAL 658
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG+V TWG G LGHG +E PK++ L K + VA G +++DG+V+S
Sbjct: 659 TKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 718
Query: 335 FGCGE 339
+G +
Sbjct: 719 WGSND 723
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 149/306 (48%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L ++ +
Sbjct: 2979 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 3038
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3039 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3096
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3155
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3156 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3211
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 3212 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3271
Query: 340 SASLGH 345
G+
Sbjct: 3272 HGQQGN 3277
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 118
T + V+ +G N QLG + P +L + ++Q A G+ ++ G++YA
Sbjct: 2942 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 176
G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 3002 CGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+D +LGH + N +P L+ L+ + IA G + A+ S +YS G G G+
Sbjct: 3061 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 3116
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 294
LGHG + P+L++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3117 LGHGDNATQLRPKLVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3225
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3099
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G + T L+ E
Sbjct: 3100 ITSSGELYSWGLGEYGRLGHGDNATQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3157
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3158 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3209
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3210 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3266
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3303
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 24/267 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 144
P +SL + + Q +++S +G VY Q K T +P L+
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 474
Query: 145 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 198
SL + +V+ A G + A LS G V+++ G+ RLGH EP + G
Sbjct: 475 SLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGK 533
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
VV IA G Y + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 590
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 591 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VY++G G++ LGH
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGH 677
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 97/238 (40%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVTAD 3991
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 3992 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSW 4051
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V +AAG H+A + G + TWG GRYG
Sbjct: 4052 GEAEDGKLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V AL + I VA +GD T +++D V+S+G G+ LG
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGR 4167
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3188 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3242
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3243 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3300
Query: 155 AIGN 158
A G+
Sbjct: 3301 ACGS 3304
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P LI + + H + +G V +WG G G LGHG+ P ++ A
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAA 529
Query: 308 LNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
N +A +H+A G + V++ DG++Y++G G LGH + D
Sbjct: 530 FNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSED 576
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3251 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAW 3310
Query: 111 SDAG---------QVYAFGKDSFGEAEYGVQ 132
+ ++ +DS G + GVQ
Sbjct: 3311 TTVDVTTPSVHEPVLFQTARDSLGASYLGVQ 3341
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 32/330 (9%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWR 85
W ++ L A C +AG +S+A+ G ++++G N G LGH T+ E
Sbjct: 29 WVCAVKALAAQNVC------SVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENI 82
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 137
P +++L +I+QAA G + + D G+ YA+G + +G+ + G + +
Sbjct: 83 PSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 142
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
T PQ S + V Q A G + VL+REG V+T+ G P D++
Sbjct: 143 TIPQRCAS--KLSVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISTPV 192
Query: 198 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
++ + V+ IA G + LAL +++ G G+LG G P ++
Sbjct: 193 RVQGLEKVRLIAVGAFHNLALL---EDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD 249
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIH 315
L L V +AAG WH+ + DG V WG G +G LG G+++ VP+ VQ L + +
Sbjct: 250 LTL--VDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ G + ++ DG ++SFG G+ LG+
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGY 337
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 19/288 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ S+GS GQLG G EE+ +++L + AG+ ++ I + G+++ +G +
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK P V++L N +VQAAIG + + +GR Y + + G
Sbjct: 68 RGTLGHPPE-TKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126
Query: 184 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
E D PL + + V Q+AAG + + L + V++ G
Sbjct: 127 EPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGH---VWT----WGQP 179
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 180 WPPGDIKQISTPVRVQGLEKVRL----IAVGAFHNLALLEDGILWAWGNNEYGQLGTGDT 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+D+ + +A G + + +++DG VY +G GE LG
Sbjct: 236 QPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLG 283
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+A +P A+ S G G G+LG G+ +++ ++ N+ VV AG+ ++ + +
Sbjct: 1 MASKPK--AIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVV--AGSRNSLAICE 56
Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG++ TWGW + G LGH E + E++P V+AL + K + A G + V + G Y++
Sbjct: 57 DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAW 116
Query: 336 GCGESASLG 344
G E G
Sbjct: 117 GGNEYGQCG 125
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ +WG G G LG GN E + V+AL V G + + EDG ++++G +
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67
Query: 340 SASLGH 345
+LGH
Sbjct: 68 RGTLGH 73
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 148/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ I L+GI + A G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHT 427
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G +G+ VT P+ VESLK + V+AA G + TA +
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L + +++ G+ +
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP-TCVAALVDPNFCRVSCGHSMTV 544
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ D K P +E +L +A GA+H AV+
Sbjct: 545 ALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPVRVEG-KLSKSFVEEIACGAYHVAVLT 599
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++ +G++S G +GV V P+LV++
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSD--VLQPKLVDA 356
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N + + G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 357 LGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIH 416
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V IA G + + S +++ G G G LGHG R PR +E L L+ V
Sbjct: 417 VSSIACGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRGSVTMPREVES--LKGLRTVR 471
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG++E + VP V AL D
Sbjct: 472 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP 531
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ G T ++ G VY+ G LG N ADG+V
Sbjct: 532 NFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG-NPHADGKV 572
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 23/254 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVW 477
Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + + G+++ +G G +G + TKLV P V +L + +
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV--PTCVAALVDPNFCR 535
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G+ T L+ G VYT +LG+ V P + G L V +IA G +
Sbjct: 536 VSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PVRVEGKLSKSFVEEIACGAYH 594
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 595 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAIC 651
Query: 269 WHAAVVGQDGRVCT 282
H V G D +C+
Sbjct: 652 LHKWVSGFDQSMCS 665
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 28/329 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q IA G H+ VT +G ++++G S G+LGHG + +P+ + +L I + G
Sbjct: 311 QNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEY 370
Query: 106 RTMLISDAGQVYAFGKDS--FGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
T ++ +G +Y +G + FG +G + + + P+ + L+ I V A G + TA
Sbjct: 371 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWI--PKKINGPLEGIHVSSIACGPWHTA 428
Query: 163 VLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
V++ G+++TF G LGH T P +VE +L+ + V+ A G + A+
Sbjct: 429 VVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVE------SLKGLRTVRAACGVWHTAAV 482
Query: 218 ACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G +++ G G G+LGHG + + P + L++ V+ G
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAA--LVDPNFCRVSCGH 540
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+ G V T G YG LG+ + + + +V L+ +A G Y V++
Sbjct: 541 SMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTS 600
Query: 329 DGDVYSFGCGESASLGHNAIADGQVCSLL 357
+VY++G G + LGH D +L+
Sbjct: 601 RTEVYTWGKGANGRLGHGDTDDRNSPTLV 629
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HAA+V + G + TWG G LGHG +
Sbjct: 293 KMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQ 350
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK+V AL + V+ G+Y T V+ GD+Y++G G
Sbjct: 351 PKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDG 387
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 147/297 (49%), Gaps = 24/297 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A S G V+++GSN SGQLG GTT P ++ L G+ + AAG ++
Sbjct: 403 AGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLA 460
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +++G+ G +LV V+ L + V A G+ + + +G
Sbjct: 461 LRSDGSVWAWGSNAYGQLGEGTTTNRLVP----VQVLSGVVAVAA--GSNHSLAVRSDGT 514
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+T WG++ +LG T N + P + G V +AAG + LA+ S V+
Sbjct: 515 VWT--WGSNLYGQLGDGTTSNRLVPVQVQGLSG---VAAVAAGSFHSLAVHSDGS---VW 566
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+ ++ P + V VAAG +H+ VV DG V TWG
Sbjct: 567 AWGSNSSGELGDGTTSNRLVPGRVPGLS----GGVAVAAGGFHSLVVRSDGTVWTWGSNS 622
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G LG G SVP VQ L+ V A+ G+ + V DG V+++G LG
Sbjct: 623 FGELGDGTTTSRSVPVQVQGLSGVVAVDA--GNSHSLAVRSDGTVWTWGYNSYGQLG 677
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 22/311 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V+++GSN+ GQLG GTT R P++ L G+ + AAG+ ++
Sbjct: 453 AGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTN--RLVPVQVLSGV--VAVAAGSNHSLA 508
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G + +G+ G +LV P V+ L + V A G+F + + +G
Sbjct: 509 VRSDGTVWTWGSNLYGQLGDGTTSNRLV--PVQVQGLSGVAAVAA--GSFHSLAVHSDGS 564
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + LG T N + P + G V +AAG + L + + V++
Sbjct: 565 VWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG---VAVAAGGFHSLVVRSDGT---VWTW 618
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T P ++ + V V AG H+ V DG V TWG+ YG
Sbjct: 619 GSNSFGELGDGTTTSRSVPVQVQGLSGV----VAVDAGNSHSLAVRSDGTVWTWGYNSYG 674
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-- 347
LG G SVP V L+ V A+ ATG VV DG V+++G LG+ +
Sbjct: 675 QLGDGTTTRRSVPVQVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNGSPL 732
Query: 348 IADGQVCSLLF 358
A + SLL+
Sbjct: 733 FATTAIRSLLY 743
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 144/297 (48%), Gaps = 24/297 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V+++GSN SG+ G GTT P ++ L G + AAG ++
Sbjct: 353 AGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGG--GVAVAAGFNHSLA 410
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
G V+A+G + G+ G T+ TSP V+ L + V A + L +G
Sbjct: 411 ARSDGSVWAWGSNDSGQLGDGT--TRNSTSPVQVQGLSGVVAVAAGFDHSL--ALRSDGS 466
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++A +LG T N + P +L VV +AAG + LA+ + V+
Sbjct: 467 VW--AWGSNAYGQLGEGTTTNRLVPVQVL-----SGVVAVAAGSNHSLAVRSDGT---VW 516
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G L G+LG G+ ++ P ++ + VAAG++H+ V DG V WG
Sbjct: 517 TWGSNLYGQLGDGTTSNRLVPVQVQGLSGV----AAVAAGSFHSLAVHSDGSVWAWGSNS 572
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG G VP V L+ + VA G + + VV DG V+++G LG
Sbjct: 573 SGELGDGTTSNRLVPGRVPGLS--GGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELG 627
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 22/300 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ G V++ GSN GQLG GTT P + L G ++ AAG+ ++
Sbjct: 53 AGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLSG--VVAVAAGSSHSLA 110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +S G+ G +L +P V+ L VV A G+ ++ + +G
Sbjct: 111 VRHDGTVWAWGSNSDGQLGDGTTTMRL--TPVRVQGLSG--VVSVAAGSSYSLAVRSDGT 166
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++ +LG T N + P + G VV +AAG + LA+ S V+
Sbjct: 167 VW--AWGSNFSGQLGDGTTSNRLVPVQVPGLSG---VVSVAAGSSHSLAVLSDGS---VW 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G++ + P + + A H+ V DG V TWG
Sbjct: 219 AWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANS 274
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G + VP VQ L+ V A V G Y + + DG V+++G S LG ++
Sbjct: 275 FGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWGHNSSGQLGDDS 332
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 139/288 (48%), Gaps = 18/288 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV G V+++GSNS GQLG GTT P ++ L G ++ AAG+ ++
Sbjct: 103 AGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLA 160
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G +LV P V L + V A + AVLS +G
Sbjct: 161 VRSDGTVWAWGSNFSGQLGDGTTSNRLV--PVQVPGLSGVVSVAAGSSHSL-AVLS-DGS 216
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + +LG T+ N + P + G L + V A + +LA + G V++
Sbjct: 217 VWAWGANSSGQLGDGTKINRLVPVQVPG-LSGVVAVAAGAAH----SLAVRSDGT-VWTW 270
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+++D P ++ + V G++H+ + DG V WG G
Sbjct: 271 GANSFGQLGDGTKSDRLVPVRVQGLSGV----VASDVGSYHSLALRSDGSVWAWGHNSSG 326
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
LG + SVP V+ L+ + V G + V DG V+++G
Sbjct: 327 QLGDDSSTSRSVPVQVRGLS--GGMAVTAGSSHSLAVGSDGTVWAWGS 372
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 135/295 (45%), Gaps = 18/295 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+AV S G V+++GSN SGQLG GTT P + L G+ + AAG+ ++
Sbjct: 153 AGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSGV--VSVAAGSSHSLA 210
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +S G+ G + +LV P V L + V A + + +G
Sbjct: 211 VLSDGSVWAWGANSSGQLGDGTKINRLV--PVQVPGLSGVVAVAAGAAHSL--AVRSDGT 266
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+T+ + +LG T+ + + P + G VV G + LAL S V++
Sbjct: 267 VWTWGANSFGQLGDGTKSDRLVPVRVQGLSG---VVASDVGSYHSLALRSDGS---VWAW 320
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG S T P + + V AG+ H+ VG DG V WG G
Sbjct: 321 GHNSSGQLGDDSSTSRSVPVQVRGLS----GGMAVTAGSSHSLAVGSDGTVWAWGSNFSG 376
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G + P VQ L + VA G + DG V+++G +S LG
Sbjct: 377 ERGEGTTNNRASPVQVQGLG--GGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLG 429
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++ +G N GQLG P P +L +R IQ A G ++ G++YA G
Sbjct: 4378 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4437
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G+ GT VT+P LVESL+++ + + A+ G LS +G V+++ G D +
Sbjct: 4438 A--GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4495
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L I V+ IA G + AC S V + G G G+LGHG
Sbjct: 4496 LGHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHG 4551
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4552 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4609
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP +++L + V G + ++ G VY++G G+ LGH
Sbjct: 4610 CKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4656
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G +Y+ G ++G+LG G P+ PI S ++ + +G
Sbjct: 3279 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3338
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + T + P+L+E+L+ + A G+ +A ++
Sbjct: 3339 HAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIETLRTKRIRDIACGSSHSAAIT 3396
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ L + VVQ+A G L G+
Sbjct: 3397 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALADHRVVQVACGSRDAQTLCLTEEGL- 3454
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P +E+ + + + + GA + + + G V TWG
Sbjct: 3455 VFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGV--MQIECGAQFSLALTKSGEVWTWGK 3512
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P +Q L K IHVA G V++ G VY++G
Sbjct: 3513 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWG 3563
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G + +S G
Sbjct: 4424 AVTPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDG 4483
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+++G+ G+ +G + + P+L+E+L I V+ A G+ +A ++ +G V T+
Sbjct: 4484 EVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWG 4541
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + ++P L+ L + IA G L C V+S G G
Sbjct: 4542 KGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDY 4599
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P IE L L V G+ + + + G V TWG G Y LGHG
Sbjct: 4600 GKLGRGGSDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4657
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
N + PK V AL K I +ATG S+ G+V+++G + LG DG V
Sbjct: 4658 NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLG-----DGTVS 4712
Query: 355 SLLFLSIFQYLQ 366
++ + Q LQ
Sbjct: 4713 AIQRPRLVQSLQ 4724
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I +L+ RI A G+ +
Sbjct: 3335 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAA 3394
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P+LV +L + VVQ A G + T L+ E
Sbjct: 3395 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALADHRVVQVACGSRDAQTLCLTEE 3452
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L + V+QI G + LAL SG V+
Sbjct: 3453 GLVFSWGDGDFGKLGRGGSEGCSIPHQ-VERLNGVGVMQIECGAQFSLALT--KSG-EVW 3508
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3509 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3565
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ + VA G
Sbjct: 3566 DHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3598
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S G V+S+G G+LGHG + RP+ I +L GI +I A G+ +
Sbjct: 4471 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSAC 4530
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G V +GK +G +G +L P+LVE+L + A G+ T ++ +
Sbjct: 4531 ITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4588
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V ++ G + +AL S VY
Sbjct: 4589 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVTKVECGSQFSVALTRSGS---VY 4644
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+ + Q + + +A G+ H G V TWG
Sbjct: 4645 TWGKGDYHRLGHGNTDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDGGEVFTWGDND 4702
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++VQ+L + V G T +S
Sbjct: 4703 EGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 150/315 (47%), Gaps = 25/315 (7%)
Query: 46 SQAIAGPGHSIA-----------VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
++ IA P +S + ++SK +V+ G N QLG + P L
Sbjct: 3216 NETIAEPSYSTSSNYADEPSLNELSSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQ 3273
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
++ I A G+ ++S G++YA G+ + G G+ V +P+ V L V +
Sbjct: 3274 LKPIHIAGGSKSLFIVSQDGKLYACGEGTNGR--LGLGHNNNVPTPKQVPILSQYVVKKV 3331
Query: 155 AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A+ G L+ +G+V+++ G D +LGH +P L+ TL + IA G
Sbjct: 3332 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPK-LIETLRTKRIRDIACGSS 3390
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ A+ S +Y+ G G G+LGHG + P+L+ L + + V VA G+ A
Sbjct: 3391 HSAAIT---SSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LADHRVVQVACGSRDAQ 3445
Query: 273 VV--GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ ++G V +WG G +G LG G E S+P V+ LN V + + G + +++ G
Sbjct: 3446 TLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSG 3505
Query: 331 DVYSFGCGESASLGH 345
+V+++G G+ LGH
Sbjct: 3506 EVWTWGKGDYYRLGH 3520
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 22/237 (9%)
Query: 118 AFGKDSFGEAEYGV----QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
A D+ G A V G+ S +E + V Q A +L+ G+V +
Sbjct: 547 ATNPDATGTAANNVACFAHGSTSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSL 606
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC---YLLALACQPSGMAVYSVG 230
N HT P+ P P+ G LE++ +VQ+AA +C ++LAL V+S G
Sbjct: 607 QHSN-----CHT-PDTTAPKPIEG-LESVNIVQLAA-HCEGRHVLALTATGD---VFSWG 655
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G GG+LGHG + + P I L Q V G+ ++A + G + TWG G YG
Sbjct: 656 NGEGGRLGHGDTSSKDIPTRI--VALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR 713
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHGN E + +P +VQ L + IHVA GD + V++ G VY++G G+ LG+
Sbjct: 714 LGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGN 770
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 7/311 (2%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG-AGRTML-ISDAGQV 116
TS ++ + G S Q + T + P+PI L+ + I+Q AA GR +L ++ G V
Sbjct: 592 TSIYILTTTGQVLSLQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDV 651
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+++G G +G +K + P + +L V G+ ++A ++ G +YT+ G
Sbjct: 652 FSWGNGEGGRLGHGDTSSKDI--PTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRG 709
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
RLGH + P ++ L+ V+ +A G +L +G+ VY+ G G GK
Sbjct: 710 TYGRLGHGNSEDKHLP-TIVQVLKQQRVIHVALGCGDAHSLCVTDTGI-VYAWGDGDFGK 767
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LG+G+ P IE Q + V V +G+ + +G+DG V +WG G G LGHG+
Sbjct: 768 LGNGTCNGSSVPVAIELPQCSD-GAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHS 826
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
E + PK +QAL + +A G ++ G++Y +G + L + + L
Sbjct: 827 EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCVTRDPIVLL 886
Query: 357 LFLSIFQYLQI 367
L+ L+I
Sbjct: 887 PILTTPPTLRI 897
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 68 GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
+N+ HG+T + I G+++ Q A +++ GQV +
Sbjct: 556 AANNVACFAHGSTSR-YSTATIELPAGVQVRQVACSETSIYILTTTGQVLSL-------- 606
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT 185
++ T T+P+ +E L+++ +VQ A VL+ FSWGN RLGH
Sbjct: 607 QHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGD 666
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
+ P ++ E Q+ +C A + +Y+ G G G+LGHG+ D+
Sbjct: 667 TSSKDIPTRIVALAER----QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDK 722
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
P +++ + + V + G H+ V G V WG G +G LG+G SVP +
Sbjct: 723 HLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAI 782
Query: 306 QALN-DVKAIHVATGDYTTFVVSEDGDVYSF 335
+ A+ V +G + + + DG VYS+
Sbjct: 783 ELPQCSDGAVKVFSGSHFSVALGRDGTVYSW 813
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 173 FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
F WG++ R LG P P L + +QIA G L A+ P G +Y+ G
Sbjct: 4380 FGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4435
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G GG+LG G P L+E Q + ++ V V +G H + DG V +WG G G
Sbjct: 4436 YGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4495
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LGHGN + PK+++AL+ + I +A G + ++ G V ++G G LGH D
Sbjct: 4496 LGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4555
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3490 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3549
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++D+GQVYA+G + G+ G T + P LV L IFV + A G+
Sbjct: 3550 CLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLDGIFVNRVACGS 3599
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
A R+ + G +S A+T+ G +Y++G + G+LGHG +E++ P ++ L+ R+I
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI 737
Query: 99 QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGV-QGTKL---VTSPQLVESLKNIFVV 152
A G G ++ ++D G VYA+G FG+ G G+ + + PQ + +F
Sbjct: 738 HVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFS- 796
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
G+ F+ L R+G VY++ G+ RLGH + P + LE +V +A G
Sbjct: 797 ----GSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQA-LEGKNIVDLAVGLA 851
Query: 213 YLLALA 218
+ LAL
Sbjct: 852 HCLALT 857
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T+ G V+S+G+ G+LGHG T + P I +L ++ G+ + I+ A
Sbjct: 641 HVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAA 700
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G++Y +G+ ++G +G K + P +V+ LK V+ A+ G+ + ++ G VY
Sbjct: 701 GELYTWGRGTYGRLGHGNSEDKHL--PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ G+ +LG+ T P + + V++ +G + +AL VYS G
Sbjct: 759 AWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALG---RDGTVYSWGK 815
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G GG+LGHG P+ I+ + N+ V +A G H + G + +GWGR
Sbjct: 816 GHGGRLGHGHSEHTASPKAIQALEGKNI--VDLAVGLAHCLALTASGEL--YGWGR 867
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 15/231 (6%)
Query: 142 LVESLKNIFVVQAAIGNFFTAV-LSREGRVYTFSWGN-DARLGHHTEPNDVEPHPLLGTL 199
+V L + GN+ T V S +++T W L T P
Sbjct: 498 IVSHLDRLAKPHLPAGNYSTKVGKSNSQKLFTLGWSACSPELYGFTAAEATNPDATGTAA 557
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGC-----------GLGGKLGHGS--RTDEK 246
N+ + Y A P+G+ V V C G L H + D
Sbjct: 558 NNVACFAHGSTSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSNCHTPDTT 617
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+ IE + +N+ + H + G V +WG G G LGHG+ + +P +
Sbjct: 618 APKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIV 677
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
AL + + V G + ++ G++Y++G G LGH D + +++
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIV 728
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+V WG LG +P L+ +K IH+A G + F+VS+DG +Y+ CG
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA--CG 3299
Query: 339 ESAS----LGHN 346
E + LGHN
Sbjct: 3300 EGTNGRLGLGHN 3311
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G G T +P + L GI + + A G+ ++
Sbjct: 3546 GALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3605
Query: 111 S--------DAGQ--VYAFGKDSFGEAEYGV---QGTKLVTSPQL 142
S D + +A KD G G+ GT+ TS L
Sbjct: 3606 SLPQNQTEKDKKEPVPFAVAKDPLGSHSLGIYASDGTEATTSSPL 3650
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ +G S+A+ G VYS+G G+LGHG +E P+ I++L+G I+ A G
Sbjct: 793 KVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAH 852
Query: 107 TMLISDAGQVYAFGKDSF 124
+ ++ +G++Y +G++ F
Sbjct: 853 CLALTASGELYGWGRNDF 870
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 117 bits (293), Expect = 9e-24, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 15/260 (5%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
R I+ + G LIS++G+++ +GK+ G+ +G+ K+ T+P+ +E + ++
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278
Query: 155 AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
G + + + VY SWG D +LGH T+ ++ + + IAAG+
Sbjct: 1279 ECGGEHSICVDSDYVVY--SWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAG 267
+ + L + SG +YS G G G+LGHGS + P IE ++ +Q +A G
Sbjct: 1337 HTIVL--KKSG-ELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACG 1393
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
H+ + +G V +WG G+ G LGHGN E + P++++AL V I + G + T +
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATT 1451
Query: 328 EDGDVYSFGCGESASLGHNA 347
+ +VYS+G GE LGH +
Sbjct: 1452 DLKNVYSWGLGEHMKLGHGS 1471
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 34/308 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGR 106
G H ++ G ++++G N SGQLGHG + + P R L+ R II G
Sbjct: 1226 GWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKR-LEFFRGKSPIIMVECGGEH 1284
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVL 164
++ + VY++G+D FG+ +G TK V+ P+++E + + A G T VL
Sbjct: 1285 SICVDSDYVVYSWGQDKFGQLGHG---TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVL 1341
Query: 165 SREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALA 218
+ G +Y+F +G+ +LGH + P +E + ++G + QIA G+ + ++
Sbjct: 1342 KKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGH--SVI 1399
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
C +G VYS G G G+LGHG+ PRLIE + + ++ G ++
Sbjct: 1400 CSDNG-EVYSWGLGKQGQLGHGNYESIARPRLIEALKGVT----KISCGHFYTMATTDLK 1454
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI-----HVAT----GDYTTFVVS 327
V +WG G + LGHG+++ E+ P+VV +V I H T GD +S
Sbjct: 1455 NVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLS 1514
Query: 328 EDGDVYSF 335
D DV F
Sbjct: 1515 NDDDVNDF 1522
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 52/335 (15%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGI-----RII 98
QAIA G H+I + G +YSFG GQLGHG+ + P I ++ GI +I
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKIT 1388
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
Q A G G +++ SD G+VY++G G+ +G + + P+L+E+LK V + + G+
Sbjct: 1389 QIACGFGHSVICSDNGEVYSWGLGKQGQLGHG--NYESIARPRLIEALKG--VTKISCGH 1444
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
F+T + VY++ G +LGH ++ N+ P + ++ V +I G + + L
Sbjct: 1445 FYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQK-NVSKIVCGLNHTITLT 1503
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----VVVAAGAWHAAVV 274
G L + S +++ + F ++L P ++ +
Sbjct: 1504 --------------YPGDLNNNSLSNDDD---VNDF--IDLAPSTSNSSSSSSLTNDNNN 1544
Query: 275 GQDGR-----------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVAT 318
G+ GR + G G +G LG G + + +P ++ +N + I ++
Sbjct: 1545 GRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISC 1604
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G T +++ +G +Y +G G +G+ D V
Sbjct: 1605 GTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWV 1639
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 119/274 (43%), Gaps = 17/274 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G GHS+ + G VYS+G GQLGHG E RPR I +L+G+ I + G
Sbjct: 1388 TQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHF 1445
Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
TM +D VY++G GE + G K +P++V+ V + G T L
Sbjct: 1446 YTMATTDLKNVYSWG---LGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITL 1502
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G + S ND + D+ P + + G L L
Sbjct: 1503 TYPGDLNNNSLSNDDDVNDFI---DLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVS 1559
Query: 225 AVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+Y+ G G GKLG G D+ P I+ LNL + ++ G A++ +G
Sbjct: 1560 PIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNL--IDISCGTDFTAMITSNGA 1617
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ WG+G +G +G+G + VP + L D KA
Sbjct: 1618 LYVWGYGNFGQIGNGKTDDAWVPIRI-PLTDSKA 1650
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 184 HTEPNDVEPHPLLGTLENIPV------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
H++ ++P P L P+ ++++ G+ ++ ++ SG +++ G G+L
Sbjct: 1194 HSKSIKLKPDPELMICPMPPLKNEKRAIKVSCGWDHVALIS--ESG-ELFTWGKNQSGQL 1250
Query: 238 GHGSRTD--EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GHG + P+ +E F+ P++ V G H+ V D V +WG ++G LGHG
Sbjct: 1251 GHGLDIGKIQTTPKRLEFFR--GKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG 1308
Query: 295 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ ++ PK+++ ++ K +A G T V+ + G++YSFG G+ LGH + +
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 11/308 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAG 103
Q ++G +TS GVV + G N SGQ GHG +E RPI++L+ R+ I A+ G
Sbjct: 385 QVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNG 444
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ I+D G Y++G + G+ + GTKL P+L+ES+K + AA+ +A+
Sbjct: 445 CEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL-PKLIESIKEKKMKSAAVSYHHSAL 503
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+S G +YTF + +LG + P L+ L V ++ G +++ C SG
Sbjct: 504 VSVSGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKALLGHHVSMVSCGLYHMVL--CTISG 560
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G+LG G K P Q L N VA G +HA + G ++
Sbjct: 561 -EVFTCGKNDHGQLGLGHNKQVKVP---TQVVLPNELVCFVACGYYHATAITSTGLTYSF 616
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G YG LG G++ +++P + ++ + +H A G Y T ++S+ G V+ FG L
Sbjct: 617 GRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQL 676
Query: 344 GHNAIADG 351
G+ D
Sbjct: 677 GNRGNTDS 684
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 17/310 (5%)
Query: 47 QAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
Q+IAG + V K G V++ G N SGQ G G +E P PI +L GI I AA
Sbjct: 3169 QSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASN 3228
Query: 105 G--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFT 161
G + IS G VY++G + G+ G +K T P+++ESL+ F+ AA+ +
Sbjct: 3229 GCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRVIESLREKYFITFAAVSYHHS 3287
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
AV+S G + TF + +LG + P L+ TL + V ++A G + +A+
Sbjct: 3288 AVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQ-LVETLSSQKVGRVACGLYHTVAIV--- 3343
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNL--QPVVVAAGAWHAAVV 274
VYS G G+LG + K P L++ + +L+ + V V G +H +
Sbjct: 3344 DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G+V TWG YG LG G++E +S+ + V + + G Y T ++ +G
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMV 3463
Query: 335 FGCGESASLG 344
FG LG
Sbjct: 3464 FGRNNKGQLG 3473
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 15/287 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
A G H IA+T G+ YS+G N GQLGH + + P+ I S++ ++ AA
Sbjct: 440 NASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYH 499
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ L+S +G++Y FG + G+ G+ T+ ++PQLV++L V + G + + +
Sbjct: 500 HSALVSVSGELYTFGMNDCGQ--LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCT 557
Query: 166 REGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G V+T + +LG H + V P L N V +A GY + A A +G+
Sbjct: 558 ISGEVFTCGKNDHGQLGLGHNKQVKV---PTQVVLPNELVCFVACGYYH--ATAITSTGL 612
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
YS G G+LG GS+ + P I N + V A G +H ++ G+V +G
Sbjct: 613 -TYSFGRNDYGQLGIGSKIHQNIP--IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669
Query: 285 WGRYGCLGHGNEECESVP---KVVQALNDVKAIHVATGDYTTFVVSE 328
G LG+ +P KV N + +H+A G YTT ++ E
Sbjct: 670 RNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVE 716
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
GN VL ++G V+T + G + + + P P+ L IP+ +AA
Sbjct: 3174 GNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPI-PALSGIPITMVAASNGCEH 3232
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH-AAV 273
LA G AVYS G G+LG G+ + H PR+IE + + AA ++H +AV
Sbjct: 3233 MLAISHDG-AVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYF--ITFAAVSYHHSAV 3289
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V +G + T+G G LG + + + P++V+ L+ K VA G Y T + +DGDVY
Sbjct: 3290 VSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVY 3349
Query: 334 SFGCGESASLGHNAIADGQVCSLL 357
SFG E LG + + +V L+
Sbjct: 3350 SFGKNEYGQLGLSHTQNTKVPMLV 3373
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
KL L L+ E+ ++ A HS V+ G +Y+FG N GQLG T+ + P+
Sbjct: 476 KLYLPKLI--ESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQ 533
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
+++L G + + G +L + +G+V+ GK+ G + G+ K V P V L
Sbjct: 534 LVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG--QLGLGHNKQVKVPTQV-VLP 590
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N V A G + ++ G Y+F + +LG ++ + P L + N +V
Sbjct: 591 NELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS-SNTRMVHA 649
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
A G CY L SG V+ G G+LG+ TD P ++ N++ + +AA
Sbjct: 650 ACG-CYHTLLMSD-SGQ-VFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAA 706
Query: 267 GAWHAAVVGQDGR 279
G + +++ + R
Sbjct: 707 GFYTTSLIVERKR 719
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS V++ G + +FG N SGQLG T+ + P+ + +L ++ + A G T+ I D
Sbjct: 3286 HSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDD 3345
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------SLKNIF-VVQAAIGNFFTAVL 164
G VY+FGK+ +G + G+ T+ P LV+ L + VQ G + T +
Sbjct: 3346 GDVYSFGKNEYG--QLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403
Query: 165 SREGRVYTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G+V T+ + +LG H P PL V+ A+ CY L
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLV 3457
Query: 221 PSGMAVYSVGCGLGGKLGHGSRT 243
V+ G G+LG SR+
Sbjct: 3458 NGRPMVF--GRNNKGQLGVASRS 3478
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 21/332 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ V G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+++G +G+ + + P+ ++SL ++ +VQ A G+ + LS++ +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158
Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
FSWG + +LG E + +L IP IAAG + AL SG A++
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG TD P L++ L + + + + G H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKS--LRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LGH + E P+ V L +A G +T V G +YSFG G + LG +
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 348 IADGQVCSLLFLSIFQYLQIWLNLSSY-RHLP 378
+ + S F WL Y RHLP
Sbjct: 332 TINRK-------SPFTVKGNWLTYEDYVRHLP 356
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ ++S+G N GQLG G ++E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ +G ++ +G++ FG + G+ P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 16/286 (5%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR + G+ T+ + D G VY G +
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 182
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ ++G
Sbjct: 64 GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
T + + +L ++ +VQ+A G+ + LAL+ ++S G G+LG G
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLE 174
Query: 243 TDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
++ PR I+ L + +AAG H+ + G + WG ++G LG +E +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P ++++L K IH+ G+ T ++++G V++FG G LGHN+
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 168
++ G V+ FG +G + G T +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGN 344
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 34/311 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ I G ++ +T G V FG N+ GQLG G T P P+ +L II G
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDH 204
Query: 107 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKL---------------------------VT 138
++ ++ AG V+ +G + G+ + V+ T++ T
Sbjct: 205 SIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYT 264
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND--VEPHPLL 196
P LV L+ I + G T +LS G VY+F LG +E +P +
Sbjct: 265 LPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIK 324
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQ 255
T N + Q+++G + L L SG VYS G G G+LG G T + P L++ F
Sbjct: 325 FTETNEKIKQLSSGASHTLFLT---SGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFN 381
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
++ V VAAG H+ + GRV TWG G G LGHGNE E++PK + + I
Sbjct: 382 QNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVID 441
Query: 316 VATGDYTTFVV 326
+ G + V+
Sbjct: 442 IFAGIDNSLVL 452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 63/367 (17%)
Query: 21 QKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT 80
++ G SW + FLL E + EN I+ VY +G+N SG +
Sbjct: 84 KQFGSSW--LNSFLLTDE---QNENDPTISNK-----------VYMWGTNKSGNMS--LP 125
Query: 81 EEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
E++R P I L+ + + G T++++ G+V FG+++FG+ G+ T+ T+
Sbjct: 126 SEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQ--LGLGDTRNRTA 183
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND------------ARLGHHTEP 187
P VE+L N ++ +G + +++ G V F WG + R+ TE
Sbjct: 184 PTPVETLNNQHIIDIGVGLDHSIAVTKAGHV--FGWGYNVEGQIGQKVVEYTRMNSTTEV 241
Query: 188 NDVEPH-------------------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
D E L+ LE I + + GY L+ + + VYS
Sbjct: 242 MDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGN---VYS 298
Query: 229 VGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
G G LG GS + P I +F N + +++GA H + G V + GWG
Sbjct: 299 FGSNEIGTLGLGSELKGRVTKPTKI-KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWG 357
Query: 287 RYGCLGHGNEECE-SVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G LG G + P +++ N +K + VA G + + + G VY++G G + L
Sbjct: 358 TEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKL 417
Query: 344 GHNAIAD 350
GH +D
Sbjct: 418 GHGNESD 424
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 53/311 (17%)
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGRTMLISD------ 112
S+ ++SFGS + +LG ++ P I L ++I Q + + L++D
Sbjct: 45 SRQKLFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNEND 104
Query: 113 ---AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ +VY +G + G + + P ++ LKN FV + G FT VL+R+G+
Sbjct: 105 PTISNKVYMWGTNKSGNMSLPSEQYRF---PTTIDLLKNTFVEKVIGGRSFTLVLTRDGK 161
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V F N +LG N P P + TL N ++ I G + ++A +G V+
Sbjct: 162 VLGFGENNFGQLGLGDTRNRTAPTP-VETLNNQHIIDIGVGLDH--SIAVTKAG-HVFGW 217
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGRVCTWG 284
G + G++G +++E ++ + V+ AG+ ++
Sbjct: 218 GYNVEGQIGQ---------KVVEYTRMNSTTEVMDGEEEGGAGSLREQMI---------- 258
Query: 285 WGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
+ E ++P +V L +K +V G +TF++S G+VYSFG E +L
Sbjct: 259 -----------PDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTL 307
Query: 344 GHNAIADGQVC 354
G + G+V
Sbjct: 308 GLGSELKGRVT 318
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 148/283 (52%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L+G ++ + G T
Sbjct: 152 GEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHT 211
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 212 ALITSTGQLFTFGDGTFGVLGHGNRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEV 269
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + V+P + +L + +IA G+ +
Sbjct: 270 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKP-TCVASLIDYDFHRIACGHSLTVG 328
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+ +G + G+LG+ R+D K P L+E N+ V VA G++H AV+
Sbjct: 329 LTT--SGQ-VWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENV--VQVACGSYHVAVLTV 382
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E +P +V+ L D H+A G
Sbjct: 383 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACG 425
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G++S G +G + + P LVES
Sbjct: 83 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVES 140
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ + P + G LE
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ 200
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 201 VAYVSCGTWHTALIT---STGQLFTFGDGTFGVLGHGNRESIPCPREVE--SLSGLKTIA 255
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V +L D
Sbjct: 256 VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYD 315
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V+ G LG N +DG++ L+
Sbjct: 316 FHRIACGHSLTVGLTTSGQVWGMGNTVYGQLG-NPRSDGKLPCLV 359
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C + V S+G + G+LG+ +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGN-PNSDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G V S G LG N +DG++ L+
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG-NPNSDGRLPCLV 344
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
R G V+T WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 330
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266
Query: 331 DVYSFGCGESASLGH 345
++++G G+ LGH
Sbjct: 267 KLFTWGDGDKHRLGH 281
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 147/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++SG LGHG W P+ + L+GI + + G T
Sbjct: 416 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 475
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 476 AIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 533
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + +E QIA G+C +
Sbjct: 534 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHCMTV 592
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 593 ALTT--SGH-VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 647
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + S P +V+AL D + V G
Sbjct: 648 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 691
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 404
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 464
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + A S +++ G G G LGHG R PR +E + L+ V
Sbjct: 465 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 519
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 520 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 579
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+A G T ++ G VY+ G LG N ADG +
Sbjct: 580 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGML 620
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 471 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 530
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 588
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 589 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 647
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 648 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 704
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 705 SGVDQSMCS 713
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ +IQ + G+
Sbjct: 44 QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTK--RPLLIPELQDYVVIQISCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +S+ GQV ++G + G+ + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSEWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 219
G +Y SWG++ +LG ++ P D+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG AV+ G G+LG + +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 339 ESASLG 344
S LG
Sbjct: 331 SSGQLG 336
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 141/290 (48%), Gaps = 20/290 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 178
+ + G +L T P L+ L++ V+Q + G+ + LS G+V SWG++
Sbjct: 67 NDHSQL-----GHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQV--LSWGDNDC 119
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH T+ V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 176
Query: 239 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
S D H + LL + +A G H+ ++ + G V +GWGR C LG +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 234
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 235 EANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G + GV K +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDEANRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L + VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLT---ANGKVYACGSNDHSQLGHELPT--KRPLLIPELQ--DYVVIQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
++ G+ H+ + + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG N+ D C+
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPKDLTHCN 187
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 21/307 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H++ +T+ G VY+ GSN QLGH + RP I LQ I Q A G+
Sbjct: 39 NQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELQDYVITQIACGSR 96
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S+ GQV+++G + G+ + +V P++V +L + VVQ A G+ + L+
Sbjct: 97 HSMALSEWGQVFSWGDNECGQLGHA-SDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPH--PL-LGTLENIPVVQIAAG--YCYLLALA 218
G +Y SWG++ +LG + PND++ P+ L TL IPV IA G + +L++
Sbjct: 156 CCGELY--SWGSNLYGQLGV-SSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLIS-- 210
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTIEG 265
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325
Query: 338 GESASLG 344
G S LG
Sbjct: 326 GSSGQLG 332
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 142/290 (48%), Gaps = 20/290 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G+ S GQLG G EEE P I + Q A G T+ ++ +G+VYA G
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGS 62
Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
+ +Y G +L T P + L++ + Q A G+ + LS G+V FSWG++
Sbjct: 63 N-----DYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQV--FSWGDNEC 115
Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH ++ + V+ ++ L + VVQIA G + LAL C +YS G L G+LG
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC---CGELYSWGSNLYGQLG 172
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 295
S D + + L PV +A G H+ ++ + V +GWGR C LG +
Sbjct: 173 VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAV--FGWGRNNCGQLGLND 230
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 231 ETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGH 280
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
+Q G HS+A++ G V+S+G N GQLGH + ++ + P+ +R+L ++Q A G+
Sbjct: 89 TQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGS 148
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 161
++ ++ G++Y++G + +G + GV + +P + +L I V A G +
Sbjct: 149 NHSLALTCCGELYSWGSNLYG--QLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHS 206
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTIEG 265
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320
Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG N + ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQLV 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V QIA G+ + L L SG VY+ G +LGH T K P I + Q +
Sbjct: 38 VNQIACGHRHTLFLTA--SG-KVYACGSNDYSQLGHELPT--KRPLQIPELQ--DYVITQ 90
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
+A G+ H+ + + G+V +WG G LGH +++ +PK+V+ L + +A G
Sbjct: 91 IACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNH 150
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G++YS+G LG ++ D Q
Sbjct: 151 SLALTCCGELYSWGSNLYGQLGVSSPNDLQ 180
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++ +G N GQLG P P +L +R IQ A G ++ G++YA G
Sbjct: 3938 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 3997
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G+ GT V++P LVESL+++ + + A+ G LS +G V+++ G D +
Sbjct: 3998 A--GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4055
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L I V+ IA G + AC S V + G G G+LGHG
Sbjct: 4056 LGHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHG 4111
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4112 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4169
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P +++L + I V G + ++ G VY++G G+ LGH
Sbjct: 4170 CKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4216
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G +Y+ G ++G+LG G PR PI + ++ + +G
Sbjct: 2930 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGK 2989
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + T + P+L+ESL+ V A G+ +A ++
Sbjct: 2990 HAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIESLRTKRVRDIACGSSHSAAIT 3047
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ TL+ VVQ+A G L G+
Sbjct: 3048 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTTLQGHRVVQVACGSRDAQTLCLTEEGL- 3105
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P +E+ + + + + GA + + + G V TWG
Sbjct: 3106 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGV--MQIECGAQFSLALTKSGEVWTWGK 3163
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P +Q L K IHVA G V++ G VY++G
Sbjct: 3164 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWG 3214
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 14/321 (4%)
Query: 49 IAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-- 105
IAG ++ AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G
Sbjct: 3975 IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGK 4034
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G+V+++G+ G+ +G + + P+L+E+L I V+ A G+ +A ++
Sbjct: 4035 HCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACIT 4092
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V T+ G RLGH + ++P L+ L + IA G L C
Sbjct: 4093 SQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDN 4150
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4151 VWSWGDGDYGKLGRGGSDGCKIPMKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGK 4208
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHGN + PK V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4209 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG- 4267
Query: 346 NAIADGQVCSLLFLSIFQYLQ 366
DG V ++ + Q LQ
Sbjct: 4268 ----DGTVTAIQRPRLVQSLQ 4284
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 12/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I SL+ R+ A G+ +
Sbjct: 2986 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAA 3045
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P+LV +L+ VVQ A G + T L+ E
Sbjct: 3046 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTTLQGHRVVQVACGSRDAQTLCLTEE 3103
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L ++ V+QI G + LAL SG V+
Sbjct: 3104 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNSVGVMQIECGAQFSLALT--KSG-EVW 3159
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3160 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3216
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3217 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S G V+S+G G+LGHG + RP+ I +L GI +I A G+ +
Sbjct: 4031 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSAC 4090
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G V +GK +G +G +L P+LVE+L + A G+ T ++ +
Sbjct: 4091 ITSQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4148
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V+++ G + +AL S VY
Sbjct: 4149 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVIKVECGSQFSVALTRSGS---VY 4204
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+ + Q + + +A G+ H G V TWG
Sbjct: 4205 TWGKGDYHRLGHGNTDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDSGEVFTWGDND 4262
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++VQ+L + V G T +S
Sbjct: 4263 EGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 10/290 (3%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
++SK +V+ G N QLG + P L ++ I A G+ ++S G++Y
Sbjct: 2890 ISSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 2947
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 175
A G+ + G G+ V +P+ V L V + A+ G L+ +G+V+++
Sbjct: 2948 ACGEGTNGR--LGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3005
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G D +LGH +E L+ +L V IA G + A+ S +Y+ G G G
Sbjct: 3006 GEDGKLGHGNRLT-LEKPKLIESLRTKRVRDIACGSSHSAAIT---SSGELYTWGLGEYG 3061
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LGHG + P+L+ Q + V + + ++G V +WG G +G LG G
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG 3121
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E SVP V+ LN V + + G + +++ G+V+++G G+ LGH
Sbjct: 3122 SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGH 3171
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLISDAGQ 115
+T+ G V+S SNSS E P+ L+G+ ++Q AA M++S A +
Sbjct: 538 LTTGGQVFSLHSNSS---------ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANE 588
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+++G G +G +K P ++ L V G ++A ++ G ++T+
Sbjct: 589 VWSWGAGDGGRLGHGDTVSK--EHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGR 646
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G RLGH + + P + L++ VV +A G ++ +G+ +++ G G G
Sbjct: 647 GTYGRLGHGNSDDKLVPTQVQA-LKSYKVVDVALGSGDAHSMCVTDNGL-LFAWGDGDFG 704
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
KLG+GS P I+ L+N+ + +G+ + + DG + TWG G G LGHGN
Sbjct: 705 KLGNGSCNGSPIPVQIDT--LVNVSRIY--SGSQFSVALSCDGTLYTWGKGHGGRLGHGN 760
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
E +VPK+V+AL K VA G ++ G++Y +G
Sbjct: 761 SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA--VLSREG 168
S + +++ G S YG + QL+ S+ + + V E
Sbjct: 474 SKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTEN 533
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + G H ++ P G LE + VVQIAA +C + S V+S
Sbjct: 534 NIYILTTGGQVFSLHSNSSENIAPKAFEG-LEGVHVVQIAA-HCEGKHVMVLSSANEVWS 591
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G GG+LGHG ++HP +I L Q + GA ++A + G + TWG G Y
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMI--VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY 649
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGHGN + + VP VQAL K + VA +GD + V+++G ++++G G+ LG+
Sbjct: 650 GRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGN 708
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 124/237 (52%), Gaps = 16/237 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H + ++S V+S+G+ G+LGHG T + P I L ++ GA + I+ A
Sbjct: 579 HVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIA 638
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G+++ +G+ ++G +G KLV P V++LK+ VV A+ G+ + ++ G ++
Sbjct: 639 GELFTWGRGTYGRLGHGNSDDKLV--PTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLF 696
Query: 172 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+ G+ +LG+ + + P P+ + TL N V +I +G + +AL+C + +Y+ G
Sbjct: 697 AWGDGDFGKLGNGS--CNGSPIPVQIDTLVN--VSRIYSGSQFSVALSCDGT---LYTWG 749
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G GG+LGHG+ P+L+ + + VA G+ H + G + +GWGR
Sbjct: 750 KGHGGRLGHGNSEHSNVPKLVRALEGKKIAD--VAVGSAHCLALTSSGEL--YGWGR 802
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 19/253 (7%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+++ Q A +++ GQV++ +S +P+ E L+ + VVQ
Sbjct: 523 LQVRQVACTENNIYILTTGGQVFSLHSNSSEN-----------IAPKAFEGLEGVHVVQI 571
Query: 155 AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A VLS V+++ G+ RLGH + P ++G E Q+ YC
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEK----QVCGIYC 627
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
A +++ G G G+LGHG+ D+ P ++ + + V + +G H+
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
V +G + WG G +G LG+G+ C P VQ V + +G + +S DG +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGS--CNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTL 745
Query: 333 YSFGCGESASLGH 345
Y++G G LGH
Sbjct: 746 YTWGKGHGGRLGH 758
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G ++++G + G+LGHG ++++ P +++L+ +++ A G+G +M
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687
Query: 109 LISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++D G ++A+G FG+ G G+ + P +++L N+ + + G+ F+ LS +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGSCNGSPI---PVQIDTLVNVSRIYS--GSQFSVALSCD 742
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G +YT+ G+ RLGH + P L+ LE + +A G + LAL
Sbjct: 743 GTLYTWGKGHGGRLGHGNSEHSNVPK-LVRALEGKKIADVAVGSAHCLALT 792
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3141 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3200
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS- 165
+ ++D+GQVYA+G + G+ G T + P LV L +FV + A G+ + S
Sbjct: 3201 CLAVTDSGQVYAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3258
Query: 166 -------REGRVYTFSWGNDARLGHH--TEPNDVEP---HPLLGTL 199
+ F+ D GH +D EP HP +GT+
Sbjct: 3259 PQNPSEKDKKEPVPFAVSKDPLGGHSLGIHASDTEPTTAHPQVGTV 3304
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G F WG++ R LG P P L + +QIA G L A+ P G
Sbjct: 3935 GASTIFGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-K 3990
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + DG V +WG
Sbjct: 3991 LYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGE 4050
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHGN + PK+++AL+ + I +A G + ++ G V ++G G LGH
Sbjct: 4051 GEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGH 4110
Query: 346 NAIAD 350
D
Sbjct: 4111 GDSED 4115
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ +G S+A++ G +Y++G G+LGHG +E P+ +R+L+G +I A G+
Sbjct: 727 SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSA 786
Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLV 143
+ ++ +G++Y +G++ + + GV ++ SP L
Sbjct: 787 HCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILT 825
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+ VT G+++++G G+LG+G+ P P++ + + + +G+ ++
Sbjct: 681 SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS--PIPVQIDTLVNVSRIYSGSQFSVA 738
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S G +Y +GK G +G ++ P+LV +L+ + A+G+ L+ G
Sbjct: 739 LSCDGTLYTWGKGHGGRLGHG--NSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGE 796
Query: 170 VYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
+Y WG ND + P+ V P++ + L P ++I+ C
Sbjct: 797 LY--GWGRNDYQ---QICPSGVSRDPIIHSPILTTPPTLRISGMTC 837
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 112/278 (40%), Gaps = 34/278 (12%)
Query: 102 AGAGRTMLISDAGQVYAFGKDS------FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
AGA L+ Q+ +FG S FG E + + +T P+ N+ + QAA
Sbjct: 393 AGAPLVSLLKRYEQIESFGSYSAVDSFHFGPTESFL---RFLTLPE--NETTNVDLKQAA 447
Query: 156 I----------------GNFFTAV-LSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLL 196
+ GN+ T V S+ +++T W + G +E + L+
Sbjct: 448 VIIISHLDRLAKPHLPAGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQ-LM 506
Query: 197 GTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
G++ I + +AC + + + + G + H + ++ P+ E +
Sbjct: 507 GSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL--HSNSSENIAPKAFEGLE 564
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
+++ + H V+ V +WG G G LGHG+ + P ++ L++ +
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ G + ++ G+++++G G LGH D V
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLV 662
>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
Length = 426
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 66 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
+ G N GQLGHG T+ P+ I L I+ AA G T+ ++D G++ G
Sbjct: 31 NLGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKG 84
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ +G TK V +P+L+E L N +V AA G T L+ G V+ F +LG
Sbjct: 85 QLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN 142
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD- 244
+ D P P P+ ++A G + + + C+ + +YS GC G+LGH S
Sbjct: 143 Q-TDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKF 198
Query: 245 -----------EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDGRVCTW 283
E PR + F Q+L + VV VA G H V+ RV +W
Sbjct: 199 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSW 258
Query: 284 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+G YG LGH ++ E VP++V+ + A H+ G +F VSE G ++ +G
Sbjct: 259 GFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSFAVSEIGGLFFWG 313
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 41/312 (13%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A G H++A+T G N GQLGHG T+ P+ I L I+ AA G T
Sbjct: 65 AACGRNHTLALTD------LGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHT 118
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +
Sbjct: 119 LALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDCK 176
Query: 168 GRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPV 204
G +Y+F +LGH+++ D E P + + N+ V
Sbjct: 177 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 236
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+A G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 237 RDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHI 293
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 294 YAGYTCSFAVSEIGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SSI 346
Query: 325 VVSEDGDVYSFG 336
+V+ D S+G
Sbjct: 347 IVAADESTISWG 358
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G++ G+ +G TK V +P+L+E L N +V AA G T L+ GR
Sbjct: 32 LGRNEKGQLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTDLGR------NEK 83
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH + VE L+ L N +V A G + LAL S V++ G G+LG
Sbjct: 84 GQLGH-GDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGS---VFAFGENKMGQLG 139
Query: 239 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G++TD P I + N QP+ +A GA + ++ G + ++G YG LGH ++
Sbjct: 140 LGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 195
Query: 297 ------------ECESVPKVVQ------------ALNDVKAIHVATGDYTTFVVSEDGDV 332
+CE VP+ V + +V VA G T V+ V
Sbjct: 196 GKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRV 255
Query: 333 YSFGCGESASLGHNAIADGQVCSLLFLSIF 362
+S+G G LGH D V L+ L F
Sbjct: 256 FSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 285
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A G ++
Sbjct: 295 AGYTCSFAVSEIGGLFFWGATNTSR------ESTMYPKAVQDLCGWKIRSLACGKSSIIV 348
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+D + +FGE YG K T+ Q V++L I+ Q A+G + V++R+
Sbjct: 349 AADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARD 406
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 17/174 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
G H++ + S+ V+S+G G+LGH ++E PR ++ G AG +
Sbjct: 242 GTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSF 301
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+S+ G ++ +G + P+ V+ L + A G V + E
Sbjct: 302 AVSEIGGLFFWGATNTSRES--------TMYPKAVQDLCGWKIRSLACGKSSIIVAADES 353
Query: 169 RVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T SWG G +P + TL+ I Q+A GY + L +A
Sbjct: 354 ---TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIA 404
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 16/312 (5%)
Query: 39 ACCR---RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
+CC R + G HS+ + G VY+ GSNS GQLGH RP + +L
Sbjct: 27 SCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS--RPELVGALDAQ 84
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+I + G ++ +++ GQV+A+G G+ G + V P+L++ L + Q
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVM 143
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
GN LS++G+++ + + +LG EP+ + P PL +L IP+ QI+AG +
Sbjct: 144 CGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPL-KSLCGIPLTQISAGGDHS 202
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
AL+ SG AV+ G G+LG D P I + L Q VV ++ G H A
Sbjct: 203 FALSF--SG-AVFGWGKNSAGQLGLNDEQDRAVPCHI---KFLRSQKVVYISCGEEHTAA 256
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDV 332
+ ++G + T+G G G LGH + E +P+ V L + +A G ++T V G +
Sbjct: 257 LTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLI 316
Query: 333 YSFGCGESASLG 344
Y+FGC LG
Sbjct: 317 YAFGCNTQGQLG 328
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 11/225 (4%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 99
C SQ + G H IA++ G ++ +G NSSGQLG G E P+P++SL GI + Q
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQ 194
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+AG + +S +G V+ +GK+S G + G+ + P ++ L++ VV + G
Sbjct: 195 ISAGGDHSFALSFSGAVFGWGKNSAG--QLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
TA L++EG ++TF G+ +LGH + N+ P ++ L V QIA G + LA
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFV- 310
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
PS +Y+ GC G+LG G R K P + N+QP+ +
Sbjct: 311 -PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVS-----NIQPLCI 349
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV +G V+++G+ GQLG GT EE R PR I+ L RI Q G +
Sbjct: 92 GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S GQ++ +G++S G+ G +G SPQ ++SL I + Q + G + LS G
Sbjct: 152 LSKDGQLFVWGENSSGQLGLG-KGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V F WG ++ +LG + E + P H + L + VV I+ G + AL + +
Sbjct: 211 V--FGWGKNSAGQLGLNDEQDRAVPCH--IKFLRSQKVVYISCGEEHTAALTKEG---GL 263
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGW 285
++ G G G+LGH S +E PR + +L+ + +A G H A V G + +G
Sbjct: 264 FTFGNGSKGQLGHDSTRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGC 321
Query: 286 GRYGCLGHG 294
G LG G
Sbjct: 322 NTQGQLGTG 330
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 63 VVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
++ +GS+ +GQLG G +E + PR G + + A G ++ + G VY G
Sbjct: 1 MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+S G+ + G++ P+LV +L + + G + ++ +G+V+ + G+ +L
Sbjct: 61 NSCGQLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G T V L+ L + Q+ G + +AL+ ++ G G+LG G
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALS---KDGQLFVWGENSSGQLGLGK 173
Query: 242 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
P+ ++ L + ++AG H+ + G V WG G LG +E+ +
Sbjct: 174 GEPSTLSPQPLKS--LCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
VP ++ L K ++++ G+ T ++++G +++FG G LGH++
Sbjct: 232 VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
++ C +Q AG HS A++ G V+ +G NS+GQLG ++ P I+ L+ ++
Sbjct: 185 KSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKV 244
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ + G T ++ G ++ FG S G + G T+ P+ V L V Q A G
Sbjct: 245 VYISCGEEHTAALTKEGGLFTFGNGSKG--QLGHDSTRNEPLPRRVMELMGTEVSQIACG 302
Query: 158 -NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
N A + G +Y F +LG + P P+
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPV 341
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
VA G T ++ G V++ G LG N +DG+ C
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGRPC 341
>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 972
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 10/275 (3%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+ G YSFG G+LGHG E P+ + +QG ++ Q G ++L++D G
Sbjct: 97 TTTAVEDGTAYSFGQGEWGKLGHGGAANEQHPKQLE-VQG-KVTQIGVGDQHSVLLTDGG 154
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY FG+ +G+ +G + K + P+ VE+L +IG F + S
Sbjct: 155 HVYTFGQGIYGQLGHGTR--KDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHS 212
Query: 175 WGNDAR-LGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
WG LGH +P+ V+ +G L+N ++Q+AAG + L L VYS+G
Sbjct: 213 WGRQGPWLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGK---VYSMGKN 269
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G LG G ++ + L N VAAG H+ V+ DG V T+G G G LG
Sbjct: 270 KDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLG 329
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
HG+ + + VP+ VQ + D KA +A G T V++
Sbjct: 330 HGDTKNQDVPRTVQGVFD-KACAIAAGFEHTIVLT 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 29/333 (8%)
Query: 37 GEACCRRENSQAIAGPGH----------SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
G C +N +++ P S+AV S+G Y +G+ S G E P
Sbjct: 19 GYECYDNKNPRSVNAPSDLISLHAGWNCSVAVNSEGTPYFWGTMPSKYDGKAKFLE---P 75
Query: 87 RPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ ++ G ++ T + G Y+FG+ +G+ +G G P+ +E
Sbjct: 76 SPLPAISIGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGHG--GAANEQHPKQLEV 133
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 204
V Q +G+ + +L+ G VYTF G +LGH T + P + + +
Sbjct: 134 QGK--VTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTI 191
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 263
I G+ A+ V+S G G LGH ++ D H + ++ LL + +
Sbjct: 192 TSIGVGFDQTFAINADG---VVHSWGR-QGPWLGHAAQPD--HVKQPQEVGLLKNKAKIM 245
Query: 264 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGD 320
VAAG H ++ DG+V + G + GCLG G ++ + P + +LN+ VA G+
Sbjct: 246 QVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGE 305
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ V++ DG V +FG G + LGH + V
Sbjct: 306 KHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDV 338
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAG 103
+Q G HS+ +T G VY+FG GQLGHGT ++ RP+ + +L + I G
Sbjct: 138 TQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVG 197
Query: 104 AGRTMLISDAGQVYAFGKDS--FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFF 160
+T I+ G V+++G+ G A V PQ V LKN ++Q A G
Sbjct: 198 FDQTFAINADGVVHSWGRQGPWLGHAAQ----PDHVKQPQEVGLLKNKAKIMQVAAGKQH 253
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALAC 219
T +L+ +G+VY+ D LG +P+ + +L N + Q+AAG + + LA
Sbjct: 254 TLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLAS 313
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S V + G G G+LGHG ++ PR + Q + + +AAG H V+
Sbjct: 314 DGS---VLTFGSGSNGRLGHGDTKNQDVPRTV---QGVFDKACAIAAGFEHTIVL 362
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
VA G T ++ G V++ G LG N +DG+ C
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGRPC 341
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 33/326 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I QAA G
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQIFVPVRVQG-LENVSIIAVGA----FHN 208
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G + + G G+LG G HP + L L V +AAG WH+ +
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTL--VDIAAGGWHSTALTD 265
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGH-NAIADGQVCSLLFL 359
FG G+ LG+ + GQ L +
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLELPIM 351
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN IA G H++A+ G + ++G+N GQLG G T+ P P+ L + ++ AA
Sbjct: 196 ENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++D G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 54/254 (21%)
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+VE+L+ V G+ + + +G ++T+ W LGH E + L N
Sbjct: 31 VVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALAN 90
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVG------CG---LGGKLGHGSRTD-------- 244
+ + Q A G + LA+ Q G A Y+ G CG L ++G R D
Sbjct: 91 VKITQAAIGGWHCLAVDDQ--GRA-YAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA 147
Query: 245 --------------------EKH---------PRLIEQF----QLLNLQPV-VVAAGAWH 270
E H P I+Q ++ L+ V ++A GA+H
Sbjct: 148 PKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFH 207
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ +DGR+ WG YG LG G+ + S P V L+D+ + +A G + + +++ G
Sbjct: 208 NLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKG 267
Query: 331 DVYSFGCGESASLG 344
+VY +G GE LG
Sbjct: 268 EVYGWGRGEHGRLG 281
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
S ++ + G G G+LG G+ +++ ++E + +++ VV +G+ ++ + DG +
Sbjct: 3 SATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVV--SGSRNSLAICDDGTMF 60
Query: 282 TWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWGW + G LGH E + E++P V+AL +VK A G + V + G Y++G E
Sbjct: 61 TWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 341 ASLGHNAIAD 350
G + D
Sbjct: 121 GQCGEEPLKD 130
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 147/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++SG LGHG W P+ + L+GI + + G T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 429
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 430 AIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + +E QIA G+C +
Sbjct: 488 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHCMTV 546
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 547 ALTT--SGH-VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 601
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + S P +V+AL D + V G
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + A S +++ G G G LGHG R PR +E L L+ V
Sbjct: 419 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVR 473
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+A G T ++ G VY+ G LG N ADG +
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGML 574
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 659 SGVDQSMCS 667
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G + +G N GQLG + P P +L +R IQ G ++ G+VYA G
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGY 640
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT V+ P L+ESL+++F+ + + G LS EG VY++ G+D
Sbjct: 641 GA--GGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDG 698
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + + P ++ +L VV +A G + AC + +Y+ G G G+LGH
Sbjct: 699 KLGHGNKSSCERPR-VIESLRGKEVVDVACGGAHS---ACITASGELYTWGKGRYGRLGH 754
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+ +E ++ V +G V D V +WG G YG LG G +
Sbjct: 755 GDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGC 814
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP V L + I V G + ++ G VY++G G+ LGH
Sbjct: 815 KVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGH 860
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 8/304 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G AVT+ G VY+ G + G+LG G T+ P + SLQ + I + +G
Sbjct: 618 QVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGG 677
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + + P+++ESL+ VV A G +A +
Sbjct: 678 KHCLALSAEGEVYSWGEGDDGKLGHGNKSS--CERPRVIESLRGKEVVDVACGGAHSACI 735
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + + P + L V +A G L C
Sbjct: 736 TASGELYTWGKGRYGRLGHGDSDDQLRPKKV-EALSGWRVRCVACGSGDAQTL-CVTDDD 793
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P ++ Q + + + V G+ + + G V TWG
Sbjct: 794 CVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGV--IRVECGSQFSVALTASGSVYTWG 851
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ PK V AL K I +A G ++ G+VY++G + LG
Sbjct: 852 KGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG 911
Query: 345 HNAI 348
+
Sbjct: 912 DGTV 915
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 12/292 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++++G VYS+G G+LGHG RPR I SL+G ++ A G +
Sbjct: 675 SGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSAC 734
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSRE 167
I+ +G++Y +GK +G +G +L P+ VE+L + V G+ T ++ +
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQL--RPKKVEALSGWRVRCVACGSGDAQTLCVTDD 792
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+++ G+ +LG +D PL + L+ + V+++ G + +AL S V
Sbjct: 793 DCVWSWGDGDYGKLGRGG--SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGS---V 847
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + P+ + Q + + +A G+ H G V TWG
Sbjct: 848 YTWGKGDYHRLGHGTDDHVRRPKRVAALQ--GKKVICIAVGSLHCVACTDTGEVYTWGDN 905
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
G LG G P++V AL K V+ G T S + CG
Sbjct: 906 DEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWSTCNPSTAGACG 957
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+E G HS +T+ G +Y++G G+LGHG ++++ RP+ + +L G R+ A
Sbjct: 720 KEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVAC 779
Query: 103 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
G+G +T+ ++D V+++G +G + G G+ P V+ L+ + V++ G+ F
Sbjct: 780 GSGDAQTLCVTDDDCVWSWGDGDYG--KLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQF 837
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ L+ G VYT+ G+ RLGH T+ + P + L+ V+ IA G L +AC
Sbjct: 838 SVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK-RVAALQGKKVICIAVG--SLHCVACT 894
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+G VY+ G G+LG G+ PRL+ Q
Sbjct: 895 DTG-EVYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
++R +T SWG + H + VE P P L + +Q+ G
Sbjct: 566 VNRRPEDWTLSWGWSGTILGWGHNHRGQLGGVEGAKVKLPMP-CEALSALRPIQVVGGEQ 624
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
L A+ + VY+ G G GG+LG G P L+E Q + ++ VVV +G H
Sbjct: 625 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCL 681
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ +G V +WG G G LGHGN+ P+V+++L + + VA G + ++ G++
Sbjct: 682 ALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGEL 741
Query: 333 YSFGCGESASLGHNAIAD 350
Y++G G LGH D
Sbjct: 742 YTWGKGRYGRLGHGDSDD 759
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ KG VY++G ++ GQLG TEE R PR I+SL I+I+Q + G ++
Sbjct: 41 GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLA 100
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S +V+++G++ +G+ G + K TSPQL++SL I +Q A G + VL+ G
Sbjct: 101 LSKGSEVFSWGQNKYGQLGLGFEFKK-QTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 159
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 160 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 213
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 286
+ G G G+LGH S + E +PR + F+L+ VA G H +A V GR+ ++G G
Sbjct: 214 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 271
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G+ P V+
Sbjct: 272 GNGQLGTGSTSNRKSPFTVK 291
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 90 QVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGA 149
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 207
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 264
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 265 IYSFGLGGNGQLGTGSTSNRKSP 287
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 89 IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLK 147
+ +L I+ + G T+ ++D GQVYA+G D+ G+ G+ GT+ + P+ ++SL
Sbjct: 27 VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQL--GLPGTEECIRVPRNIKSLS 84
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVV 205
+I +VQ + G + + LS+ V FSWG + +LG E L+ +L IP +
Sbjct: 85 DIQIVQVSCGYYHSLALSKGSEV--FSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFM 142
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
QIAAG + L SG A++ G G+LG D P L++ L + + V +
Sbjct: 143 QIAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 197
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 324
G H A + ++G V T+G G YG LGH + E P+ V L VA G +T+
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 257
Query: 325 VVSEDGDVYSFGCGESASLG 344
V G +YSFG G + LG
Sbjct: 258 FVPSSGRIYSFGLGGNGQLG 277
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+V + G+ T L+ +G+VY + D +LG + + +L +I +VQ++ G
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAW 269
Y + LAL+ G V+S G G+LG G + P+LI+ LL + + +AAG
Sbjct: 95 YYHSLALS---KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS--LLGIPFMQIAAGGA 149
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H+ V+ G + WG ++G LG +E VP ++++L K +++ G+ T ++++
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 209
Query: 330 GDVYSFGCGESASLGHNAIA 349
G V++FG G LGHN+ +
Sbjct: 210 GGVFTFGAGGYGQLGHNSTS 229
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 203 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 260
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 261 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++ +G N GQLG P P +L +R IQ A G ++ G++YA G
Sbjct: 4090 TIFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4149
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ GV GT VT+P LVESL+++ + + A+ G LS +G V+++ G D +
Sbjct: 4150 A--GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4207
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ +L I VV IA G + + Q V + G G G+LGHG
Sbjct: 4208 LGHGNRDSYDRPK-LIESLSGIGVVDIACGSAHSACITIQGH---VLTWGKGRYGRLGHG 4263
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4264 DSEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4321
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP +++L + V G + ++ G VY++G G+ LGH
Sbjct: 4322 CKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4368
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 151/312 (48%), Gaps = 13/312 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAG 114
AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G + +S G
Sbjct: 4136 AVTPDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDG 4195
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+++G+ G+ +G + + P+L+ESL I VV A G+ +A ++ +G V T+
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWG 4253
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G RLGH + ++P L+ L + IA G L C V+S G G
Sbjct: 4254 KGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDY 4311
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
GKLG G K P IE L L V G+ + + + G V TWG G Y LGHG
Sbjct: 4312 GKLGRGGSDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4369
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
N + PK V AL K I +ATG S+ G+V+++G + LG DG V
Sbjct: 4370 NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-----DGTVS 4424
Query: 355 SLLFLSIFQYLQ 366
++ + Q LQ
Sbjct: 4425 AIQRPRLVQSLQ 4436
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G +Y+ G ++G+LG G P+ PI S ++ + +G
Sbjct: 3066 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3125
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + T + P+L+E+L+ + A G+ +A ++
Sbjct: 3126 HAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIETLRTKRIRDIACGSSHSAAIT 3183
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ L++ VVQ+A G L G+
Sbjct: 3184 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALQDHRVVQVACGSRDAQTLCLTEDGL- 3241
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P +++ + + + + GA + + + G V TWG
Sbjct: 3242 VFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGV--MQIECGAQFSLALTKAGEVWTWGK 3299
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P +Q L K IHVA G V++ G VY++G
Sbjct: 3300 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWG 3350
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 12/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I +L+ RI A G+ +
Sbjct: 3122 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAA 3181
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P+LV +L++ VVQ A G + T L+ +
Sbjct: 3182 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQDHRVVQVACGSRDAQTLCLTED 3239
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L + V+QI G + LAL V+
Sbjct: 3240 GLVFSWGDGDFGKLGRGGSEGCSIPHQ-VDRLNGVGVMQIECGAQFSLALT---KAGEVW 3295
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3296 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3352
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ + VA G
Sbjct: 3353 DHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
V+SK +V+ G N QLG + P L ++ I A G+ ++S G++Y
Sbjct: 3026 VSSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 175
A G+ + G G+ V +P+ V L V + A+ G L+ +G+V+++
Sbjct: 3084 ACGEGTNGR--LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3141
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G D +LGH +P L+ TL + IA G + A+ S +Y+ G G G
Sbjct: 3142 GEDGKLGHGNRLTLEKPK-LIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYG 3197
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 293
+LGHG + P+L+ Q + + V VA G+ A + +DG V +WG G +G LG
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQ--DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGR 3255
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G E S+P V LN V + + G + +++ G+V+++G G+ LGH
Sbjct: 3256 GGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGH 3307
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S G V+S+G G+LGHG + RP+ I SL GI ++ A G+ +
Sbjct: 4183 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSAC 4242
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G V +GK +G +G +L P+LVE+L + A G+ T ++ +
Sbjct: 4243 ITIQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGYRAIDIACGSGDAQTLCITDD 4300
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + V ++ G + +AL S VY
Sbjct: 4301 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVTKVECGSQFSVALTRSGS---VY 4356
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+ + Q + + +A G+ H G V TWG
Sbjct: 4357 TWGKGDYHRLGHGNTDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDAGEVFTWGDND 4414
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++VQ+L + V G T +S
Sbjct: 4415 EGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 80 TEEEWRPRPIRSLQGIRIIQAAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
TE+ + P ++ L+ + AA GR +L ++ +G VY++G G +G K +
Sbjct: 594 TEDNY-PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL- 651
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
P + +L + V G+ ++A ++ G +YT+ G RLGH + P L+
Sbjct: 652 -PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVP-TLVTA 709
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L+ VV +A G +L +G+A ++ G G GKLG+ S P ++ Q
Sbjct: 710 LKAHRVVHVALGCGDAHSLCVTEAGLA-FAWGDGDFGKLGNESCVGTSVPVQVDLPQASC 768
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V V +G+ + + ++G V TWG G G LGHGN E VPK+VQAL K + +A
Sbjct: 769 V--VKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAV 826
Query: 319 GDYTTFVVSEDGDVYSFG 336
G ++ G++Y +G
Sbjct: 827 GLAHCLALTASGELYGWG 844
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
A R+ + G +S A+T+ G +Y++G + G+LGHG +E+++ P + +L+ R++
Sbjct: 657 ALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV 716
Query: 99 QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
A G G ++ +++AG +A+G FG + G + + P V+ + VV+
Sbjct: 717 HVALGCGDAHSLCVTEAGLAFAWGDGDFG--KLGNESCVGTSVPVQVDLPQASCVVKVFS 774
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+ F+ L+REG VYT+ G+ RLGH + P ++ LE +V +A G + LA
Sbjct: 775 GSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPK-MVQALEGKKIVDLAVGLAHCLA 833
Query: 217 L 217
L
Sbjct: 834 L 834
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 204 VVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+VQ+AA +C ++LALA S VYS G G GG+LGHG + ++ P I L + Q
Sbjct: 609 IVQLAA-HCEGRHVLALA---SSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA--LADRQ 662
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 319
V G+ ++A + G + TWG G YG LGHGN E + VP +V AL + +HVA G
Sbjct: 663 VTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722
Query: 320 -DYTTFVVSEDGDVYSFGCGESASLGHNA 347
D + V+E G +++G G+ LG+ +
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNES 751
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 20/240 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ S G VYS+GS G+LGHG T + P I +L ++ G+ + I+ +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G++Y +G+ ++G +G K V P LV +LK VV A+ G+ + ++ G +
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYV--PTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVY 227
+ G+ +LG+ + P + ++P VV++ +G + +AL + + VY
Sbjct: 738 AWGDGDFGKLGNESCVGTSVPVQV-----DLPQASCVVKVFSGSQFSVALTREGT---VY 789
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G GG+LGHG+ P++++ + + V +A G H + G + +GWGR
Sbjct: 790 TWGKGHGGRLGHGNSEHSPVPKMVQALEGKKI--VDLAVGLAHCLALTASGEL--YGWGR 845
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA + +
Sbjct: 3281 GAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAV 3340
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+D+GQVYA+G + G+ G T + P LV L IFV + A G+
Sbjct: 3341 TDSGQVYAWGDNDHGQQ--GSGNTIVNKKPSLVLGLDGIFVNRVACGS 3386
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 173 FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
F WG++ R LG P P L + +QIA G L A+ P G +Y+ G
Sbjct: 4092 FGWGHNHRGQLGGLDGSRIKNPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4147
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G GG+LG G P L+E Q + ++ V V +G H + DG V +WG G G
Sbjct: 4148 YGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4207
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LGHGN + PK++++L+ + + +A G + ++ G V ++G G LGH D
Sbjct: 4208 LGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSED 4267
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+ G VY++ G+ RLGH D L + + Q+ +C A +
Sbjct: 624 LASSGDVYSWGSGDGGRLGH----GDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y+ G G G+LGHG+ D+ P L+ + + V + G H+ V + G W
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739
Query: 284 GWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
G G +G L GNE C SVP V + V +G + ++ +G VY++G G
Sbjct: 740 GDGDFGKL--GNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGG 797
Query: 342 SLGH 345
LGH
Sbjct: 798 RLGH 801
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ +G S+A+T +G VY++G G+LGHG +E P+ +++L+G +I+ A G
Sbjct: 771 KVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAH 830
Query: 107 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLV 143
+ ++ +G++Y +G++ F + V ++T+P L
Sbjct: 831 CLALTASGELYGWGRNDFQQICPECVTRDPIITAPILT 868
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S T++ +P ++ + +Q G H + G V +WG G G LGHG+ +
Sbjct: 592 SMTEDNYPAQVKGLECTIVQLAAHCEGR-HVLALASSGDVYSWGSGDGGRLGHGDTSAKE 650
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+P + AL D + V G + ++ G++Y++G G LGH D V +L+
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLV 707
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G VY++G N GQ G G T +P + L GI + + A G+ ++
Sbjct: 3333 GALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392
Query: 111 S--------DAGQ--VYAFGKDSFGEAEYGVQGTK---LVTSP---------------QL 142
S D + +A KD G G+ + +SP ++
Sbjct: 3393 SLPQNQTEKDKKEPVPFAVAKDPLGSHSLGIYASDTEATTSSPLPVPSGSKQQRPSLSEI 3452
Query: 143 VESLKNIFVVQAAIGNFFTAV 163
V SL+ QAA+ + A+
Sbjct: 3453 VLSLETASARQAALSHIINAM 3473
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 27/292 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 426
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 485 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 540
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL SG VY++G + G+LG+ D K P +E +L +A GA+H AV+
Sbjct: 541 VALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPTRVEG-KLHKSFVEEIACGAYHVAVL 595
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 596 TSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 420 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 479
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G +G + KLV P V +L Q A G+
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 537
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG+ V P + G L V +IA G ++ L
Sbjct: 538 SLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEIACGAYHVAVLT 596
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H
Sbjct: 597 ---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWA 653
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 654 SGMDQSMCS 662
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y VG L K+ D P+ +E +L++Q +A G HA +V + G +WG
Sbjct: 283 YRVGSSLEIKM------DSLLPKALESTIVLDVQ--YIACGGQHAVLVTKQGESFSWGEE 334
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGHG + PK++ AL+ VA G+Y + V+ GD+Y++G G+ LGH
Sbjct: 335 SEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH 393
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 150/292 (51%), Gaps = 26/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 369 GEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 428
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 429 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 486
Query: 165 -------SREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
S V F+WG+ RLGH + + P + N V Q+A G+ +
Sbjct: 487 MVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHN--VCQVACGHSLTV 544
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D K P L+E +L +A GA+H AV+
Sbjct: 545 ALTT--SGR-VYTMGSPVYGQLGN-PQADGKLPILVEG-KLSESFVEEIACGAYHVAVLT 599
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V TWG G G LGHG+ + + P +V+AL D +A G TTF +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACG--TTFTAA 649
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+++G++S G +GV V P+L+E+
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIEA 357
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L N + A G + + ++ G +YT WGN LGH + + P + G LE
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYT--WGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG 415
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 416 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 470
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + + TWG G G LGH ++E + VP V AL
Sbjct: 471 VRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-ALA 529
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ VA G T ++ G VY+ G LG N ADG++ L+
Sbjct: 530 EHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG-NPQADGKLPILV 576
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 113/251 (45%), Gaps = 28/251 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 483
Query: 111 SDAG------------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++ +G G + + KLV P V +L V Q A G+
Sbjct: 484 VEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV--PTCV-ALAEHNVCQVACGH 540
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLA 216
T L+ GRVYT +LG+ P P+L G L V +IA G ++
Sbjct: 541 SLTVALTTSGRVYTMGSPVYGQLGN---PQADGKLPILVEGKLSESFVEEIACGAYHVAV 597
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHA 271
L S VY+ G G G+LGHG D P L+E + +++ + AA H
Sbjct: 598 LT---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAICLHK 654
Query: 272 AVVGQDGRVCT 282
V G D +C+
Sbjct: 655 WVSGVDQSMCS 665
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G++ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 GAKMDSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV 349
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK+++AL++ VA G+Y + V+ GD+Y++G G
Sbjct: 350 LHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNG 388
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 14/277 (5%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
H +A+T G VYS+G S+G LG G TE + P + +L G RI+ +AG+ + +++
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE 577
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G +Y +GK S+G +G KL+ P +VE L + +VQ G+ T L G+V
Sbjct: 578 DGVLYTWGKGSYGRLGHGNAEDKLI--PTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQV 635
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+ +LG + P P+ G PVV+I G +AL +YS G
Sbjct: 636 WSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALT---KDGKLYSWG 692
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRY 288
CG +LGHG++ + P+LIE + VV V+ GA H + D V WG
Sbjct: 693 CGDTYQLGHGNQEHVRQPKLIEGLS----ETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
+ + S P +++A + A+ +A G TFV
Sbjct: 749 FEVNESGDIISS-PLMIEAASGKGALLIACGASETFV 784
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 11/296 (3%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAA--AGAGRTMLISD 112
AVT G VY+ G + G+LG G+++ P P+ SL +GI + + A +G + ++
Sbjct: 3881 AVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTT 3940
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G++YA+G+ G + G+ T + P L+ESLK+ V+ A G+ +A ++ +G +YT
Sbjct: 3941 QGELYAWGEGEDG--KLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYT 3998
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ G RLGH+ +P L+ L+ V +A G L SG V+S G G
Sbjct: 3999 WGKGRYGRLGHNDHETQHKPK-LVSALKGEQVTCVACGSGDAQTLCATASG-CVFSWGDG 4056
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLG G K P+ I+ L + + G+ + + G V TWG G Y LG
Sbjct: 4057 DYGKLGRGGNEGSKVPKKID--SLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLG 4114
Query: 293 HGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
HG++ + P +V+ L I + G V +E G V+S+G + +G++
Sbjct: 4115 HGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDT 4170
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +AVT++G +Y++G G+LG GTT P I SL+ +I A G+ +
Sbjct: 3930 SGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSAC 3989
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+D G +Y +GK +G + T+ P+LV +LK V A G+ L
Sbjct: 3990 ITDDGSLYTWGKGRYGRLGHNDHETQ--HKPKLVSALKGEQVTCVACGSGDAQTLCATAS 4047
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
FSWG+ +LG P + +L V+++ G + +AL + VY
Sbjct: 4048 GCVFSWGDGDYGKLGRGGNEGSKVPKK-IDSLTGKHVIKLLCGSQFSMALT---TAGHVY 4103
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G +LGHG + ++ PR + LL + V+ + G+ H V + G+V +WG
Sbjct: 4104 TWGKGDYYRLGHGDDSHQRTPRRV--LGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDN 4161
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G +G+ + SVPK + +++ HVA G
Sbjct: 4162 DEGQIGNDTTQAVSVPKRINITDNICIDHVACG 4194
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 127/286 (44%), Gaps = 10/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N GQLG + PR SL + G ++D G+VYA G +
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895
Query: 124 FGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
G G+ + V +P + SL + I V + AI G ++ +G +Y + G D
Sbjct: 3896 HGR--LGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LG T N PH L+ +L++ V+ G + AC ++Y+ G G G+LGH
Sbjct: 3954 KLGLGTTVNMNVPH-LIESLKSKHVIDAGCGSSHS---ACITDDGSLYTWGKGRYGRLGH 4009
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
+ P+L+ + + V +G G V +WG G YG LG G E
Sbjct: 4010 NDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGS 4069
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VPK + +L I + G + ++ G VY++G G+ LGH
Sbjct: 4070 KVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGH 4115
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ P H + +T G V+ S G T E+ + P +Q I +
Sbjct: 470 SSPKHRVVLTVHGTVFYVMDASMGDF---TVEQLFFPGDEEIIQ----IDHNPSGNHILA 522
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+VY++G+ S G G+ T+ T+P V +L +V + G+ +A ++ +G
Sbjct: 523 LTKDGKVYSWGQGSNGV--LGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ G+ RLGH + + P + G L + +VQ+ G LA +G V+S
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQ-VWSW 638
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G GKLG K P+ I + PVV + G + + +DG++ +WG G
Sbjct: 639 GDGDYGKLGRPGSDQNKVPKPISGIG--STSPVVKIICGNQISMALTKDGKLYSWGCGDT 696
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
LGHGN+E PK+++ L++ V+ G ++ D DVY++G S
Sbjct: 697 YQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 13/305 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG-AG 105
Q G S V+ G V++ G SSG+LG G P I SL + + A AG
Sbjct: 2962 QFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAG 3021
Query: 106 RTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
R +L ++ G+V+++G +G+ +G + P+++E + + + + G +A +
Sbjct: 3022 RHVLAVTADGKVFSWGDGQYGQLGHG--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAV 3079
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
S G ++T+ G D RLGH N +P L+ LE + + +A G LA +
Sbjct: 3080 SVNGELFTWGQGADGRLGHGDSNNQTKPK-LVRALEKVRISCVACGSRNAHTLAAGDN-- 3136
Query: 225 AVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
++++ G G GKLG GS + + ++I + + G + ++ ++G+V T
Sbjct: 3137 SLWAWGDGSFGKLGLKDGSSSTDVPVQVIT----FPSNIIQIECGMHFSVLLTKEGKVYT 3192
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G Y LG+ + + +P +V L VA G ++ G+VYS+G E
Sbjct: 3193 WGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQ 3252
Query: 343 LGHNA 347
G+N+
Sbjct: 3253 QGNNS 3257
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +AVT+ G V+S+G GQLGHG+ + RP+ I Q I + + G G + +S
Sbjct: 3023 HVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVN 3082
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+++ +G+ + G +G + T P+LV +L+ + + A G+ L+ G +
Sbjct: 3083 GELFTWGQGADGRLGHGDSNNQ--TKPKLVRALEKVRISCVACGSRNAHTLA-AGDNSLW 3139
Query: 174 SWGNDA--RLGHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+WG+ + +LG + DV P ++ NI +QI G + + L + VY+
Sbjct: 3140 AWGDGSFGKLGLKDGSSSTDV-PVQVITFPSNI--IQIECGMHFSVLLTKEGK---VYTW 3193
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G +LG+ S + + P L++ L + VA GA H + G V +WG +G
Sbjct: 3194 GKGEYYRLGNDSTSVQPIPTLVD--GLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG 3251
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+ + C P++V +L + +A G
Sbjct: 3252 QQGNNSTICNRKPQIVASLKGHRICKIACG 3281
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 149/300 (49%), Gaps = 16/300 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V+ +G N QLG +E + + P R+L + IQ A G+ + ++SD G+V+A G+
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDA 179
S G G+ G + P + SL V + A+ G AV + +G+V+++ G
Sbjct: 2986 SSG--RLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAV-TADGKVFSWGDGQYG 3042
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + + P ++ + + +++ G + A++ +++ G G G+LGH
Sbjct: 3043 QLGHGSLQSYDRPK-MIEIFQAKHIREVSCGTGHSAAVSVNGE---LFTWGQGADGRLGH 3098
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEE 297
G ++ P+L+ + + + V + H G D + WG G +G LG G+
Sbjct: 3099 GDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG-DNSLWAWGDGSFGKLGLKDGSSS 3157
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ +V+ +++ I + G + + +++++G VY++G GE LG+++ + + +L+
Sbjct: 3158 TDVPVQVITFPSNI--IQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLV 3215
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
GN A L+++G+VY++ G++ LG + P + L +V I+AG + +
Sbjct: 517 GNHILA-LTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMH--S 572
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A G+ +Y+ G G G+LGHG+ D+ P ++E + + V +G H +
Sbjct: 573 AAVTEDGV-LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 335
G+V +WG G YG LG + VPK + + + + G+ + +++DG +YS+
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691
Query: 336 GCGESASLGH 345
GCG++ LGH
Sbjct: 692 GCGDTYQLGH 701
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + +DG+V +WG G G LG GN E ++ P V AL+ + +H++ G + V+ED
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLL 357
G +Y++G G LGH D + +++
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIV 606
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 173 FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
F WG++ R LG E N V+ L +L + I G L A+ VY+ G
Sbjct: 3837 FGWGHNHRGQLGG-IEGNKVKSPRLCESLSELNPAMITGGEQTLFAVT---DDGKVYASG 3892
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQL--LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G+LG GS + P + + ++ + + +G H V G + WG G
Sbjct: 3893 YAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED 3952
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG G +VP ++++L I G + +++DG +Y++G G LGHN
Sbjct: 3953 GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHN 4010
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ I G S+A+T G +YS+G + QLGHG E +P+ I L + + GA
Sbjct: 671 KIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQH 730
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+ ++ VYA+GK+S E + +++SP ++E+
Sbjct: 731 CVALTTDSDVYAWGKNSSFEVN---ESGDIISSPLMIEA 766
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
S +V+ G G+LG K PRL E LN P ++ G V DG+V
Sbjct: 3832 STFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELN--PAMITGGEQTLFAVTDDGKVY 3889
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+ +G LG G+ + + P + +L VK I + +G V+ G++Y++G
Sbjct: 3890 ASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949
Query: 338 GESASLGHNAIADGQVCSLL 357
GE LG + V L+
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLI 3969
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H +A+TS G VYS+G N GQ G+ +T +P+ + SL+G RI + A G+
Sbjct: 3224 TQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSS 3283
Query: 106 RTMLISDAGQVYA--FGKDSF-------------GEAEYGVQGTKLVTSP---QLVESLK 147
++ + A F SF G++ + TK P Q++ SLK
Sbjct: 3284 HSIAFAQGSLTTAVKFSPISFSNSKDPLGASIVHGKSSDDAKETKDKERPSLTQIIISLK 3343
Query: 148 NIFVVQAAIGNFFTAV 163
Q A+G+ TA+
Sbjct: 3344 QHSKRQEALGHVLTAL 3359
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAG 105
+ + G S+A+T+ G VY++G +LGHG + PR + L +I G+
Sbjct: 4085 KLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSL 4144
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ +++G+V+++G + E + G T+ V+ P+ + NI + A G+ + S
Sbjct: 4145 HCIVCTESGKVFSWGDND--EGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWS 4202
Query: 166 REGR 169
+ R
Sbjct: 4203 SKQR 4206
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 33/323 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA GA
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHC 103
Query: 108 MLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G +++ G G+LG G +P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGH-NAIADGQVCSL 356
FG G+ LG+ + GQ L
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLEL 348
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK ++P LV+SL N+ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 184 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
EP+ E P+ + + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG 281
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG G +E + + VV AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 170 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHT 229
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 230 ALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEV 287
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+C +
Sbjct: 288 MAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHCLTV 346
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ ++ D P +E N + + GA+H AV+
Sbjct: 347 ALT---TSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 401
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + ++ P +V+AL D + V G
Sbjct: 402 SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCG 445
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 30/286 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V+ P+L+++
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 158
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I V I+ G + L+ A Q +++ G G G LGHG R PR +E L L
Sbjct: 217 IHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRESISVPREVE--SLKGL 269
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG++E + VP V A
Sbjct: 270 RTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAA 329
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
L + VA G T ++ G VY+ G LG N ADG +
Sbjct: 330 LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NTQADGML 374
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 225 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 284
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 342
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG +T+ + + P + G L V +I+ G ++ L
Sbjct: 343 CLTVALTTSGHVYTMGSAVYGQLG-NTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 401
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 402 ---SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 458
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 459 SGVDQSMCS 467
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 43/300 (14%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 523
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 579
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAA 266
+AL SG VY++G + G+LG+ +R D K H +E+ +A
Sbjct: 580 VALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IAC 626
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA+H AV+ V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 627 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 459 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 518
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G +G + KLV P V +L Q A G+
Sbjct: 519 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 576
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG+ V P + G L V +IA G ++ L
Sbjct: 577 SLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYHVAVLT 635
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H
Sbjct: 636 ---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWA 692
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 693 SGMDQSMCS 701
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 331 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK++ ALN VA G+Y + V+ GD+Y++G G+ LGH
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH 432
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 214 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 273
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 274 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 331
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 332 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 389
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C + V S+G + G+LG+ + +D + P L+E ++ + VA G++H AV+
Sbjct: 390 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 445
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 446 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 488
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 145 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 262
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 263 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 317
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 318 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 377
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G V S G LG N +DG++ L+
Sbjct: 378 FYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG-NPNSDGRLPCLV 421
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 112 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 170
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
R G V F+WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 171 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 224
Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 225 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 283
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 330
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 284 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 343
Query: 331 DVYSFGCGESASLGH 345
++++G G+ LGH
Sbjct: 344 KLFTWGDGDKHRLGH 358
>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 439
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 147/314 (46%), Gaps = 26/314 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSG-QLGHGTTEEE------WRPRPIRSLQGIRIIQAAA 102
AG HS+ +T G VY+ G + +G QLG EE + P + L + +++ AA
Sbjct: 100 AGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAA 159
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G +++++ VY+FG++ +G G + +P LVE+L+ +VQ G+ +A
Sbjct: 160 GPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRW--TPTLVEALRGEEIVQVVAGDTNSA 217
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ-- 220
+++ G+V F WG+ R ND L+ L P+ +A G C+ L L
Sbjct: 218 AITKSGQV--FMWGS-CRSCIDLPSNDPTKPTLVEALSGTPIAAVALGECHCLFLTTDGL 274
Query: 221 --PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G+ +Y G LG + R +++ PR I F +AAG H+ V+ +DG
Sbjct: 275 VLSCGLDLYHSGL-LGYDVRDNPRKEQRVPRPIPHFT--GEVAAAIAAGEGHSLVLTRDG 331
Query: 279 RVCTWGWGRYGCLGHGNEECE-------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
R+ +G R G LG G E +P V AL V+ V + ++ DG
Sbjct: 332 RLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGS 391
Query: 332 VYSFGCGESASLGH 345
VYSFG GE LGH
Sbjct: 392 VYSFGDGEFYQLGH 405
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 14/235 (5%)
Query: 27 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 86
W L L GE E Q +AG +S A+T G V+ +GS S + + +P
Sbjct: 193 WTPTLVEALRGE-----EIVQVVAGDTNSAAITKSGQVFMWGSCRS--CIDLPSNDPTKP 245
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--GEAEYGVQGT--KLVTSPQL 142
+ +L G I A G + ++ G V + G D + G Y V+ K P+
Sbjct: 246 TLVEALSGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRP 305
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTL 199
+ A G + VL+R+GR++ F +LG E N +P L +
Sbjct: 306 IPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPV 365
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ VQ+A L +VYS G G +LGHG+ P+ I+
Sbjct: 366 AALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDAL 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG-KLGH-GSRTDEKHPRLIEQ 253
+G L + + +AAG + L L VY+ G L G +LG G R ++
Sbjct: 87 IGALRGLRIAAVAAGENHSLFLT---DDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVP 143
Query: 254 FQLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
++ L VVV AAG H+ V+ V ++G RYG LG G+ E P +V+AL
Sbjct: 144 ERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTPTLVEALRG 203
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+ + V GD + +++ G V+ +G S
Sbjct: 204 EEIVQVVAGDTNSAAITKSGQVFMWGSCRS 233
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+A P HS A+ G VYSFG QLGHGTT+ P+ I +L + A+ T+
Sbjct: 377 VAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTL 436
Query: 109 LI 110
+
Sbjct: 437 AL 438
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LG+GT W P+ I L+G ++ + G T
Sbjct: 137 GEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKP-TCVASLIDYDFCRIACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V S+G + G+LG+ R+D K P LIE ++ V VA G++H AV+
Sbjct: 314 LTT--SGQ-VLSMGNTVYGQLGN-PRSDGKLPCLIED--IMGEHVVQVACGSYHVAVLTN 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E +P +V++L D H+A G T +
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAI 417
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G++S G +G + + P+LVES
Sbjct: 68 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LG+ T+ + P + G LE
Sbjct: 126 LAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQ 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + A S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E + P V +L D
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V S G LG N +DG++ L+
Sbjct: 301 FCRIACGHSLTVGLTTSGQVLSMGNTVYGQLG-NPRSDGKLPCLI 344
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 75/355 (21%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---GIRIIQAAAGAGRT 107
G H+ +T KG +Y++G G+LGHGT E PR + + +R++ A G T
Sbjct: 169 GAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHT 228
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--------------------ESLK 147
+ ++ G VY+FG + + G + ++PQLV S
Sbjct: 229 VALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTS 288
Query: 148 NIF-------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
+F +++ + +A +S+ G +YT+ G++ RLGH P
Sbjct: 289 TLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQ 348
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQ 253
++ +L +V ++ G + +AL + V+S G G G+LGHG+ T ++ P+ I+
Sbjct: 349 VM-SLHGHTIVDMSLGGGHSMALTKRGE---VFSWGRGENGQLGHGTFTSQQMTPKQIQA 404
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
FQ N V++AG +H+ + +G + WG G YG LG V + +L D+ +
Sbjct: 405 FQ--NKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLG--------VSSSLDSLGDINS 454
Query: 314 ------------------------IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
I+V++G +E+GD+YS+GCG LG
Sbjct: 455 PVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLG 509
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 41/291 (14%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVV 152
+++ + GA T +I+D G +Y +G G+ +G + + P+LVE + ++ VV
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGT--LESYSEPRLVEFFETKPSLRVV 219
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---------------- 196
A G T L+ G VY+F + +LG + P L
Sbjct: 220 SVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSS 279
Query: 197 --------GTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGS 241
TL N Q + ++ L+C + A +Y+ G G G+LGHG
Sbjct: 280 PIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGD 339
Query: 242 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ P+ Q L+ +V ++ G H+ + + G V +WG G G LGHG +
Sbjct: 340 SLMQSTPK---QVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396
Query: 301 V-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ PK +QA + ++ G Y + + +G ++++G G+ LG ++ D
Sbjct: 397 MTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLD 447
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 55/328 (16%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI-------------- 95
G H++A+T G VYSFG N S QLG G + P + + Q
Sbjct: 224 GGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283
Query: 96 --------------------RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
RII+ + R+ IS G +Y +G+ G +G +
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHG--DSL 341
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+ ++P+ V SL +V ++G + L++ G V+++ G + +LGH T +
Sbjct: 342 MQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQ 401
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLI 251
+ +N + I+AG + +A+ S +++ G G G LG S D P LI
Sbjct: 402 IQAFQNKTIKVISAGGYHSIAIDTNGS---MFAWGRGDYGVLGVSSSLDSLGDINSPVLI 458
Query: 252 EQFQLLNLQP----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ N + V++G H ++G + +WG G LG NEE + +
Sbjct: 459 KSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLI 518
Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSE 328
PK + N+ K + G+ T +V +
Sbjct: 519 PKKLNDRSNNSKPAFFSCGEIITIIVEK 546
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 44/241 (18%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIA 208
VV + G T++++ +G +YT+ G +LGH T + EP T ++ VV +A
Sbjct: 163 VVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVA 222
Query: 209 AGYCYLLALACQPSGMAVYSVG----CGLGGKLGHGSRTDEKHPRLIEQFQ--------- 255
G + +AL + VYS G C LG LG+ S + P+L+ FQ
Sbjct: 223 NGGKHTVALTVCGN---VYSFGGNDSCQLG--LGNISSSYYSTPQLV-TFQSPQSLSNSN 276
Query: 256 -------------LLNLQP----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
L N Q + ++ +A + + G + TWG G G LG
Sbjct: 277 SSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLG 336
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
HG+ +S PK V +L+ + ++ G + +++ G+V+S+G GE+ LGH Q
Sbjct: 337 HGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396
Query: 353 V 353
+
Sbjct: 397 M 397
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-- 309
E+ L + V ++ GA H +++ G + TWG G G LGHG E S P++V+
Sbjct: 154 ERIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETK 213
Query: 310 -DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++ + VA G T ++ G+VYSFG +S LG I+
Sbjct: 214 PSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNIS 254
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 147/290 (50%), Gaps = 14/290 (4%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P +L +R IQ A G I+ G+VYA G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ G + VT P L+ESL+++FV + A+ G LS EG VY++ G D
Sbjct: 3674 GA--GGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDG 3731
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + P ++ +L VV +A G + A+ +Y+ G G G+LGH
Sbjct: 3732 KLGHGNKLPCDRPR-IIESLRGKDVVDVACGGAHSAAITALGE---LYTWGKGRYGRLGH 3787
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA---AVVGQDG-RVCTWGWGRYGCLGHGN 295
G D+ P+L+E LL + + VA G+ A A+ ++G V +WG G YG LG G
Sbjct: 3788 GDSDDQLKPKLVEA--LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGG 3845
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +P +++L+ + I V G + +S +G VY++G G+ LGH
Sbjct: 3846 SDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGH 3895
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T+ G V+S+G G+LGHG PR I +L G R+ AAG+ +
Sbjct: 2792 SGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAA 2851
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L +P+ VESL VVQ + G + T L
Sbjct: 2852 VTSSGELYTWGLGEYGRLGHGDNLTQL--TPKRVESLVGQRVVQVSCGSRDAQTLALVEG 2909
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P L+ L + V + G + +AL C VY
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPC-LVDKLSGLGVCHVECGAQFSVALTCNGH---VY 2965
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P L+E + + + V+ GA H V G+V WG
Sbjct: 2966 TWGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDND 3023
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G+ P +VQ ++ +K VA G
Sbjct: 3024 HGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 143/293 (48%), Gaps = 10/293 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
A+TS G VY+ G + G+LG G E P + SLQ + + + A +G + +S
Sbjct: 3660 FAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSE 3719
Query: 114 GQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G+VY++G+ G+ +G KL P+++ESL+ VV A G +A ++ G +YT
Sbjct: 3720 GEVYSWGEGEDGKLGHG---NKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYT 3776
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGC 231
+ G RLGH + ++P L+ L V+ +A G A G V+S G
Sbjct: 3777 WGKGRYGRLGHGDSDDQLKPK-LVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGD 3835
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLG G K P IE L + + V G+ + + +G V TWG G Y L
Sbjct: 3836 GDYGKLGRGGSDGCKIPTKIESLSGLGI--IKVECGSQFSVALSNNGSVYTWGKGDYHRL 3893
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG +E PK V L K I ++TG V ++ G+VY++G + LG
Sbjct: 3894 GHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLG 3946
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 22/283 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ A G +
Sbjct: 3708 SGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAA 3767
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +GK +G +G +L P+LVE+L V+ A G+ T ++ E
Sbjct: 3768 ITALGELYTWGKGRYGRLGHGDSDDQL--KPKLVEALLGYRVMDVACGSGDAQTCAITDE 3825
Query: 168 --GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G V+++ G+ +LG P +E +L + ++++ G + +AL+
Sbjct: 3826 EGGTVWSWGDGDYGKLGRGGSDGCKIPTKIE------SLSGLGIIKVECGSQFSVALS-- 3877
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ +VY+ G G +LGHG + P+ + Q + + ++ GA H V G V
Sbjct: 3878 -NNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQ--GKKVISISTGALHCVVCTDQGEV 3934
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
TWG G LG G P++V AL + K V+ G T
Sbjct: 3935 YTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHT 3977
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 9/305 (2%)
Query: 48 AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 104
++AG S+ VT G Y+ G S+G+LG G + P I +L +R + +G
Sbjct: 2735 SVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGG 2794
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ G+V+++G+ G+ +G + +P+ +E+L V A G+ +A +
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHG--DVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + P + +L VVQ++ G LA G+
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGDNLTQLTPK-RVESLVGQRVVQVSCGSRDAQTLALVEGGL 2911
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VYS G G GKLG G P L+++ L + V GA + + +G V TWG
Sbjct: 2912 -VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV--CHVECGAQFSVALTCNGHVYTWG 2968
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P +V+ L K I V+ G V++ G V+++G + G
Sbjct: 2969 KGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG 3028
Query: 345 HNAIA 349
+ +I
Sbjct: 3029 NGSIT 3033
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S A +VY +G + E G +G+K + PQ V+ ++ + A G+ ++++ G+
Sbjct: 2694 VSGAKRVYVWGLND-KEQLGGPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGK 2751
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
Y G++ RLG N PH + +++ V ++A ALA G V+S
Sbjct: 2752 AYACGEGSNGRLGLGHSRNVNSPHQITALSQHV-VRKVAVHSGGRHALALTADGR-VFSW 2809
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLGHG T PR IE ++ VAAG+ H+A V G + TWG G YG
Sbjct: 2810 GEGDDGKLGHGDVTSLDTPRCIEALNGFRVRD--VAAGSNHSAAVTSSGELYTWGLGEYG 2867
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
LGHG+ + PK V++L + + V+ G D T + E G VYS+G G+ LG
Sbjct: 2868 RLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLG 2924
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
RVY + + +LG P + T+ P+ AG L L Q SG A Y+
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPIS--VAGGSKSLFLVTQ-SGKA-YA 2754
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G+LG G + P I ++ V V +G HA + DGRV +WG G
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDD 2814
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGHG+ P+ ++ALN + VA G + V+ G++Y++G GE LGH
Sbjct: 2815 GKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGH 2871
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H + T +G VY++G N GQLG GTT +PR + +LQ +I + + G+ T+
Sbjct: 3920 TGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G V+++G N GQ G+G+ RP ++ + GI+I + A G+ ++
Sbjct: 3003 GALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSV 3060
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 25/305 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
AG HS+ V+ G V+++G N+SGQL G T + P P+ S + I+ +G ++
Sbjct: 56 AGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPR--DIVSVVSGEAHSL 113
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ +AG V+A+G +S G+ G ++ +P V L ++ V A G+F + L +G
Sbjct: 114 ALDEAGTVWAWGGNSSGQLGDGTTTDRV--TPMQVAGLTDVVAVAA--GDFHSLALRGDG 169
Query: 169 RVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V+ +WG + +LG HTEP + P P+ G LE VV +AAG+ + LA+ +
Sbjct: 170 TVW--AWGTNFHGQLGRGHTEPG-LTPEPVPG-LEG--VVALAAGFDFTLAVMDDGT--- 220
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V + G G+LG G+ T P + ++ V AG +HA +G+DG V TWG
Sbjct: 221 VRAWGANSSGQLGDGTFTQRLAPVEVAHISGIS----AVTAGTYHAVALGKDGGVWTWGA 276
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G +VP V L VKA VA+ D ++ + E G V ++G S LG
Sbjct: 277 NSSGQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSGQLGD 334
Query: 346 NAIAD 350
+ D
Sbjct: 335 SGTDD 339
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 22/300 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTM 108
AG H +A+ G V+++G N+ GQLG GT+ W PR + L+ + + AAG ++
Sbjct: 1007 AGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDVEAV--AAGEQFSV 1064
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSR 166
+ G +A+G + +G+ G G +L +E+ L+ A A+++
Sbjct: 1065 AVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA- 1123
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V +WG++A +LG T P + G VV ++ G + LAL +
Sbjct: 1124 DGTVQ--AWGDNAHGQLGDGTTERRAAPVVVRGL---TGVVAVSTGAWHSLALRSDGT-- 1176
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG G+ P + Q + V + AG +HA V DG V WG
Sbjct: 1177 -VWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV----VAIGAGGYHALAVRSDGSVWAWG 1231
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +G LG G E +P V+ L++V + VA GD+ + + DG + ++G + LG
Sbjct: 1232 YNAFGQLGDGTAESRLLPVRVEGLSNVTS--VAGGDHHSLALLADGSLGAWGNNAAGQLG 1289
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 31/316 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+AV G +++G+N SGQLG GT + P+ + S++ +R + +AGA +
Sbjct: 957 AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKRVRAM--SAGAHHVVA 1014
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+ +G ++ G+ G + P+ V L+++ V AA F AVL G
Sbjct: 1015 LGEDGAVWTWGDNTLGQLGDGTSAPTWMW-PRQVPELRDVEAV-AAGEQFSVAVLVGGG- 1071
Query: 170 VYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+WG+ D + G P V + + PV + A + +AL +
Sbjct: 1072 --AHAWGSNEYGQLGDGKTGPRLTPVQVR---IEASKLRQPVRTVRAWAQHAVALMADGT 1126
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V + G G+LG G+ P ++ + V V+ GAWH+ + DG V
Sbjct: 1127 ---VQAWGDNAHGQLGDGTTERRAAPVVVRGLTGV----VAVSTGAWHSLALRSDGTVWA 1179
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG +G LG G + P V L V AI G Y V DG V+++G
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQKVVAI--GAGGYHALAVRSDGSVWAWGYNAFGQ 1237
Query: 343 LGHNAIADGQVCSLLF 358
LG DG S L
Sbjct: 1238 LG-----DGTAESRLL 1248
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 32/301 (10%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A G ++++G+N SGQLG G+T P ++ L+G+ + +AG ++ +
Sbjct: 911 HGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV--SAGRAFSLAVRQD 968
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G +A+G + G+ G ++ V P+ V S+K + + A G L +G V+T
Sbjct: 969 GTAWAWGANPSGQLGDGTNHSQRV--PKQVTSVKRVRAMSA--GAHHVVALGEDGAVWT- 1023
Query: 174 SWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
WG++ +LG T P + P + E V +AAG + +A+ G ++ G
Sbjct: 1024 -WGDNTLGQLGDGTSAPTWMWPRQV---PELRDVEAVAAGEQFSVAVLV---GGGAHAWG 1076
Query: 231 CGLGGKLGHGSRTDEKHPRL------IEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTW 283
G+LG G + PRL IE +L QPV V A A HA + DG V W
Sbjct: 1077 SNEYGQLGDG----KTGPRLTPVQVRIEASKL--RQPVRTVRAWAQHAVALMADGTVQAW 1130
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G +G LG G E + P VV+ L V + V+TG + + + DG V+++G L
Sbjct: 1131 GDNAHGQLGDGTTERRAAPVVVRGLTGV--VAVSTGAWHSLALRSDGTVWAWGANGFGQL 1188
Query: 344 G 344
G
Sbjct: 1189 G 1189
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 22/294 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ S G V+++G+N GQLG GTT P + LQ +++ AG + +
Sbjct: 1167 HSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAVRSD 1224
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G ++FG+ G ++L+ P VE L N+ V A G+ + L +G +
Sbjct: 1225 GSVWAWGYNAFGQLGDGTAESRLL--PVRVEGLSNVTSV--AGGDHHSLALLADGSL--G 1278
Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WGN+A +LG T + G VV++ AG + LAL + V++ G
Sbjct: 1279 AWGNNAAGQLGDGTGTTRYSRVWVKGV---DGVVEVRAGAAHTLALRGDGT---VWTWGD 1332
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
+LG G D R++ + + L V + AGA H+ VG G V WG +G
Sbjct: 1333 NTHSQLGAGD--DSTRTRIVPR-PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQ 1389
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G+ + P V+ L +V V+ G + + DG V S+G +LG
Sbjct: 1390 LGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRDGTVSSWGSSLHGALG 1441
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 138/358 (38%), Gaps = 68/358 (18%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE------------------- 83
R+ ++G HS+A+ G V+++G NSSGQLG GTT +
Sbjct: 100 RDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGD 159
Query: 84 ------------W-------------------RPRPIRSLQGIRIIQAAAGAGRTMLISD 112
W P P+ L+G ++ AAG T+ + D
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMD 217
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V A+G +S G+ G +L +P V + I V A G + L ++G V+T
Sbjct: 218 DGTVRAWGANSSGQLGDGTFTQRL--APVEVAHISGISAVTA--GTYHAVALGKDGGVWT 273
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ + +LG + P + G V + A LL V + G
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGS------VLAWGAN 327
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG D P + + + V GA HA + DG + WG G G LG
Sbjct: 328 GSGQLGDSGTDDRATPGEVPGLRSV----AAVVGGAQHALALRGDGTLWAWGGGLAGQLG 383
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG E VP + L DV ++ A G + + DG V+S+G LG A+
Sbjct: 384 HGGSERHVVPAPLLRLADVASM--AAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAE 439
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 140/346 (40%), Gaps = 64/346 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR------------- 96
AG HS+A G V+S+G N+ GQLG GTT E + L GIR
Sbjct: 407 AGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVG 466
Query: 97 -----------------------------------IIQAAAGAGRTMLISDAGQVYAFGK 121
++ A G TM + G V+A+G
Sbjct: 467 ADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGY 526
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
++ G+ G +L +P V L ++ V A G +F+ L +G V+T+ G + ++
Sbjct: 527 NALGQLGDGTTVDRL--TPVRVARLDSVVAVAA--GTYFSMALRGDGTVWTWGEGFEGQV 582
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G + P + G L N V ++AAG + ALA + G V++ G G+LG G+
Sbjct: 583 GDGGGVQRLFPVQVAG-LTN--VTRVAAGSAH--ALAVRGDGT-VWAWGDNGEGQLGDGT 636
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+D P + + V+ G H+ + DG V WG+ YG LG G
Sbjct: 637 WSDRFRPVQVPGLTGIT----AVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVR 692
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P VV L ++A+H + + DG + +G LG A
Sbjct: 693 PAVVPGLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGA 736
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 22/316 (6%)
Query: 37 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
GE R + + G H++A+ G ++++G +GQLGHG +E P P+ L
Sbjct: 344 GEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--D 401
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ AAG+ ++ G V+++G++++G+ G + + VE L I V AA
Sbjct: 402 VASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAER--HAAVRVEGLSGIRGV-AAS 458
Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G+ AV +G V+ +WG +A +LG + + P + G VV +A G +
Sbjct: 459 GHHSLAV-GADGTVW--AWGRNAAGQLGDGSTRDRARPVAVSGLTS---VVAVATGGSHT 512
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL + V++ G G+LG G+ D P + + + V VAAG + + +
Sbjct: 513 MALRGDGT---VWAWGYNALGQLGDGTTVDRLTPVRVARLDSV----VAVAAGTYFSMAL 565
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG V TWG G G +G G P V L +V VA G V DG V++
Sbjct: 566 RGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNV--TRVAAGSAHALAVRGDGTVWA 623
Query: 335 FGCGESASLGHNAIAD 350
+G LG +D
Sbjct: 624 WGDNGEGQLGDGTWSD 639
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 18/314 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
++ AG H++AV G V+++G N GQLG GT + +RP + L GI + + G
Sbjct: 603 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTGITAV--SGGRS 660
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + G V A+G + +G+ G +++ P +V L I + + + L
Sbjct: 661 HSMALHGDGSVRAWGYNGYGQLGDGTFTSRV--RPAVVPGLTGIQALHPS--HLHVLALH 716
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G + + + +LG P + G V ++A G + L + +P G A
Sbjct: 717 ADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGR---VDRLAVGRAHTLMV--RPDG-A 770
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V + G G+LG G+ T P L+ + VA+G H+ + DG V WG
Sbjct: 771 VLAWGENASGQLGDGTTTHRAGPVLVRGVPCVR----SVASGVLHSLALACDGSVWAWGA 826
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G +P V L A+ + + DG +++G LG
Sbjct: 827 NGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQLGD 884
Query: 346 NAIADGQVCSLLFL 359
+ +D V L L
Sbjct: 885 GSTSDRAVPGQLKL 898
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 127/293 (43%), Gaps = 22/293 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ + G + +G N GQLG G RP +R L R+ + A G T+++
Sbjct: 711 HVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLG--RVDRLAVGRAHTLMVRPD 768
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V A+G+++ G+ G T P LV + + V A G + L+ +G V+
Sbjct: 769 GAVLAWGENASGQLGDGT--TTHRAGPVLVRGVPCVRSV--ASGVLHSLALACDGSVW-- 822
Query: 174 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WG + R LG T + V P + G + V LLA ++ G
Sbjct: 823 AWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLADGT------AWAWGA 876
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG GS +D P ++ L + VA G H G+DG + WG G L
Sbjct: 877 NAHGQLGDGSTSDRAVPGQLK----LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQL 932
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G+ P V+ L V + V+ G + V +DG +++G S LG
Sbjct: 933 GEGSTTPSPTPVRVKGLEGVAS--VSAGRAFSLAVRQDGTAWAWGANPSGQLG 983
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 22/271 (8%)
Query: 85 RPRPIRSLQGIRI----IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-S 139
+PR R+ Q I + ++ AAG+ ++ +S G V+A+G ++ G+ G + T L +
Sbjct: 36 QPRAART-QRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQ--LGGEATPLQRLA 92
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P + S ++I V + G + L G V+ + + +LG T + V P + G
Sbjct: 93 PAPLPSPRDIVSVVS--GEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLT 150
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ VV +AAG + LAL + V++ G G+LG G P + + +
Sbjct: 151 D---VVAVAAGDFHSLALRGDGT---VWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGV-- 202
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V +AAG V DG V WG G LG G P V ++ + A V G
Sbjct: 203 --VALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGISA--VTAG 258
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
Y + +DG V+++G S LG A +D
Sbjct: 259 TYHAVALGKDGGVWTWGANSSGQLGDGAWSD 289
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 23/307 (7%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-----LQGIRI 97
R+ AG S+AV G +++GSN GQLG G T P +R Q +R
Sbjct: 1051 RDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRT 1110
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++A A L++D G V A+G ++ G+ G T+ +P +V L + V + G
Sbjct: 1111 VRAWA-QHAVALMAD-GTVQAWGDNAHGQLGDGT--TERRAAPVVVRGLTGVVAV--STG 1164
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ + L +G V+ + +LG T + P + G + VV I AG + LA+
Sbjct: 1165 AWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK---VVAIGAGGYHALAV 1221
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
S V++ G G+LG G+ P +E + VA G H+ + D
Sbjct: 1222 RSDGS---VWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVT----SVAGGDHHSLALLAD 1274
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG G LG G V+ ++ V + V G T + DG V+++G
Sbjct: 1275 GSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALRGDGTVWTWGD 1332
Query: 338 GESASLG 344
+ LG
Sbjct: 1333 NTHSQLG 1339
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 107
AG H++A+ G V+++G N+ QLG G R PRP+ L G+ I AGA +
Sbjct: 1313 AGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAI--GAGARHS 1370
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G V+A+G++S G+ G + P V+ L + VV G F+ + R+
Sbjct: 1371 FAVGPKGTVWAWGRNSHGQLGLGDNANR--AEPLRVKELAEVSVVSG--GADFSLAMQRD 1426
Query: 168 GRVYTFSWGN 177
G V SWG+
Sbjct: 1427 GTVS--SWGS 1434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ + G + ++G+N++GQLG GT + ++ + G +++ AGA T+ +
Sbjct: 1267 HSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDG--VVEVRAGAAHTLALRGD 1324
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G ++ + G T+ P+ V L + + A + F + +G V+ +
Sbjct: 1325 GTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSF--AVGPKGTVWAW 1382
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG N EP + L + VV A + LA Q G V S G L
Sbjct: 1383 GRNSHGQLGLGDNANRAEPLRVK-ELAEVSVVSGGADFS----LAMQRDGT-VSSWGSSL 1436
Query: 234 GGKLGHGSRTDEKHP 248
G LG G+ P
Sbjct: 1437 HGALGLGTAGQRSSP 1451
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS AV KG V+++G NS GQLG G P ++ L + ++ + GA ++
Sbjct: 1365 AGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVV--SGGADFSLA 1422
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
+ G V ++G G G G + +SP V
Sbjct: 1423 MQRDGTVSSWGSSLHGALGLGTAGQR--SSPGQV 1454
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 152/306 (49%), Gaps = 20/306 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V+++GSN+SGQLG GTT P ++ L G ++ +AGA ++
Sbjct: 341 AGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQGLSG--VVAVSAGASSSLA 398
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I G V+A+G ++ G+ G +LV P V+ L + V A G F+ + +G
Sbjct: 399 IRSDGTVWAWGSNASGQLGDGTTTDRLV--PVQVQGLSGVVAVVA--GTSFSLAVRNDGT 454
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + +LG T + P + G VV +AAG + LA+ + V+++
Sbjct: 455 VWGWGYNGYGQLGTFTSLFVLVPVQVTGL---SGVVAVAAGNLHSLAVRSDGT---VWAL 508
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG GS T+ P Q+ L VV VAAG H+ V DG V WG+ +
Sbjct: 509 GRNDNGQLGDGSWTNRSAP-----VQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSF 563
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G+ S P V L+ ++ A+ DY + V DG V+++G LG
Sbjct: 564 GQLGDGSWFQRSAPVQVTGLSGRGSV-AASSDY-SMAVRYDGTVWAWGFNLYGQLGDGTT 621
Query: 349 ADGQVC 354
+ Q+
Sbjct: 622 SSNQLV 627
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V+++G+N+SGQLG GTT P P+ L ++ AG+ ++
Sbjct: 143 AGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLS--EVVAVEAGSSHSLA 200
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G ++ G+ G +LV V+ L + ++A G+ ++ + +G
Sbjct: 201 LRSDGTVWAWGANASGQLGDGTTTKRLVP----VQVLSGVVAMEA--GSGYSLAVRNDGT 254
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + +LG T + P +LG E VV +AAG LAL + V++
Sbjct: 255 VWAWGYNFSGQLGDDTVTSRSTPVQVLGLSE---VVAVAAGSSLSLALRSDGT---VWAW 308
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+ G G+ ++ P Q L V VAAG H+ V DG V WG
Sbjct: 309 GSNDYGQRGEGTTSNRAFP-----VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNAS 363
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G S P VQ L+ V + V+ G ++ + DG V+++G S LG
Sbjct: 364 GQLGEGTTSNRSEPVQVQGLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTT 421
Query: 349 AD 350
D
Sbjct: 422 TD 423
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 24/305 (7%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A AG HS+A+ + G V+++G N GQLG+G+ P ++ L G + AG +
Sbjct: 41 AAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSG--GVSVDAGHYHS 98
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ + D G V+A+G + G+ G +LV P V+ L + V A G+ + L +
Sbjct: 99 LAVRDDGTVWAWGDNPNGQLGEGTTTRRLV--PVQVQGLSEVVAVTA--GSSHSLALRSD 154
Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V+ +WG +A +LG T N + P P+LG E VV + AG + LAL +
Sbjct: 155 GTVW--AWGANASGQLGEGTTTNRLVPVPVLGLSE---VVAVEAGSSHSLALRSDGT--- 206
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G G+LG G+ T P Q+L+ V + AG+ ++ V DG V WG+
Sbjct: 207 VWAWGANASGQLGDGTTTKRLVP-----VQVLS-GVVAMEAGSGYSLAVRNDGTVWAWGY 260
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG S P VQ L + + VA G + + DG V+++G + G
Sbjct: 261 NFSGQLGDDTVTSRSTP--VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGE 318
Query: 346 NAIAD 350
++
Sbjct: 319 GTTSN 323
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 26/304 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV G V+++G N +GQLG GTT P ++ L ++ AG+ ++
Sbjct: 93 AGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLS--EVVAVTAGSSHSLA 150
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G ++ G+ G +LV P L L + V+A G+ + L +G
Sbjct: 151 LRSDGTVWAWGANASGQLGEGTTTNRLVPVPVL--GLSEVVAVEA--GSSHSLALRSDGT 206
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG +A +LG T + P +L VV + AG Y LA+ + V+
Sbjct: 207 VW--AWGANASGQLGDGTTTKRLVPVQVLS-----GVVAMEAGSGYSLAVRNDGT---VW 256
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG + T P Q+L L VV VAAG+ + + DG V WG
Sbjct: 257 AWGYNFSGQLGDDTVTSRSTP-----VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSN 311
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
YG G G + P VQA + VA G + V DG V+++G S LG
Sbjct: 312 DYGQRGEGTTSNRAFP--VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369
Query: 347 AIAD 350
++
Sbjct: 370 TTSN 373
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 143/291 (49%), Gaps = 26/291 (8%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G V++ G+N SGQLG GT + R P++ L ++ AAAG+ ++ + + G V+A+G
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDN--RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWG 61
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--D 178
+ +G+ G G++ P V+ L V A G++ + + +G V+ +WG+ +
Sbjct: 62 YNGYGQLGNGSLGSR--AEPVQVQGLSGGVSVDA--GHYHSLAVRDDGTVW--AWGDNPN 115
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LG T + P + G E VV + AG + LAL + V++ G G+LG
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSE---VVAVTAGSSHSLALRSDGT---VWAWGANASGQLG 169
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G+ T+ P +L L VV V AG+ H+ + DG V WG G LG G
Sbjct: 170 EGTTTNRLVP-----VPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTT 224
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
VP VQ L+ V A+ +G + V DG V+++G S LG + +
Sbjct: 225 KRLVP--VQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTV 271
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 61/293 (20%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+A+ S G V+++GSN+SGQLG GTT + P ++ L G+ + AG ++
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSGV--VAVVAGTSFSLA 448
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+ +G + +G+ G + V P V L + V A GN + + +G
Sbjct: 449 VRNDGTVWGWGYNGYGQ--LGTFTSLFVLVPVQVTGLSGVVAVAA--GNLHSLAVRSDGT 504
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL------------ 217
V+ ++ +LG + N P + G VV +AAG + LA+
Sbjct: 505 VWALGRNDNGQLGDGSWTNRSAPVQVTGL---SGVVSVAAGDSHSLAVRYDGSVWAWGYN 561
Query: 218 ---------------ACQPSGMA--------------------VYSVGCGLGGKLGHGSR 242
Q +G++ V++ G L G+LG G+
Sbjct: 562 SFGQLGDGSWFQRSAPVQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT 621
Query: 243 TDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
+ + P ++Q + + V V G+ H+ + DG V TWG+ +G LG+G
Sbjct: 622 SSNQLVPVQVQQLRGV----VAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQD 277
+P G V++ G G+LG G+R + P Q+L L VV AA G+ H+ + D
Sbjct: 1 MRPDGT-VWAAGNNGSGQLGDGTRDNRSTP-----VQVLGLSEVVAAAAGSIHSLALRND 54
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG+ YG LG+G+ + P VQ L+ + V G Y + V +DG V+++G
Sbjct: 55 GTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLS--GGVSVDAGHYHSLAVRDDGTVWAWGD 112
Query: 338 GESASLGH 345
+ LG
Sbjct: 113 NPNGQLGE 120
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 43/300 (14%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 109
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 164
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 489
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 545
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAA 266
+AL SG VY++G + G+LG+ +R D K H +E+ +A
Sbjct: 546 VALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IAC 592
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
GA+H AV+ V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 111/249 (44%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G T +
Sbjct: 425 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 484
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G +G + KLV P V +L Q A G+
Sbjct: 485 VEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 542
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG+ V P + G L V +IA G ++ L
Sbjct: 543 SLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYHVAVLT 601
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H
Sbjct: 602 ---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWA 658
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 659 SGMDQSMCS 667
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 297 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK++ ALN VA G+Y + V+ GD+Y++G G+ LGH
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH 398
>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
Length = 1060
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 127/254 (50%), Gaps = 19/254 (7%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---WRPRPIRSLQGIRII 98
R + + P H+ +VY+ G N++GQLG G E WR R R +G R+
Sbjct: 17 RNRSPPTVDDPAHA-----HHLVYACGYNATGQLGCGDRESRVVPWRVRTSRLGKG-RVD 70
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
A G+ ++++ AGQV + GK+ G+ +G G T+P++VE L+ + VV A
Sbjct: 71 GVACGSSYSVVVV-AGQVASCGKNVHGQLGHG--GRDEETAPRVVEGLRGVRVVAVAARG 127
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L GRVY++ G++ +LGH + PHP VV + AG + LAL
Sbjct: 128 AHTLALDDRGRVYSWGRGDEGQLGHGA--FEAVPHPRRIARLPTSVVAVGAGRTHSLALD 185
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
AVYS GCG G LGHG R + PR +E F+ V+ G+ H AVV DG
Sbjct: 186 AD---GAVYSWGCGDDGALGHGDRRRQLAPRAVEFFK--TRPAAAVSCGSRHNAVVTADG 240
Query: 279 RVCTWGWGRYGCLG 292
+ TWGW YG G
Sbjct: 241 ALVTWGWAAYGQCG 254
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VYA G ++ G+ G + +++V L V A G+ ++ V+ G+V +
Sbjct: 34 VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVV-AGQVASCGK 92
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+LGH + P + G L + VV +AA + LAL + VYS G G G
Sbjct: 93 NVHGQLGHGGRDEETAPRVVEG-LRGVRVVAVAARGAHTLALDDRGR---VYSWGRGDEG 148
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LGHG+ HPR I + L V V AG H+ + DG V +WG G G LGHG+
Sbjct: 149 QLGHGAFEAVPHPRRIAR---LPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGD 205
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
+ P+ V+ A V+ G VV+ DG + ++G G +A DG
Sbjct: 206 RRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDG 261
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 13/221 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G VYS+G G LGHG + PR + + + G+ +
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G + +G ++G+ G L + + V AA G T +R
Sbjct: 236 VTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHAS 295
Query: 170 ---VYTFSWGNDARLGHHT----EPNDVEPHPLLGTLE---NIPVVQIAAGYCYLLALAC 219
++ F W + G T P V LG+ E V ++AG + +
Sbjct: 296 GDAIWAFGWNAYGQCGGSTCSAAAPRRVGGK-FLGSQEGGDGAVVEALSAGGRHSVCCVR 354
Query: 220 QP-SGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLN 258
P G A Y+ G G G+LG G R D + +PR+ +N
Sbjct: 355 LPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVN 395
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 152/308 (49%), Gaps = 19/308 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T+ G VY+ G+N QLGH + RP I LQ ++ A G+
Sbjct: 40 QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTK--RPLLIPELQNYVVVAIACGSRH 97
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M +++ GQV ++G + G+ + ++ P+++ SL + VVQ A GN + L+
Sbjct: 98 SMALTEWGQVLSWGDNDCGQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTS 156
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALACQ 220
G +Y SWG++ +P H PL L TL IP+ IA G + +L++
Sbjct: 157 CGELY--SWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLIS---- 210
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
AV+ G G+LG ++ +P ++ + L ++ VA G + + +G V
Sbjct: 211 -KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGV 267
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 339
T G G YG LGHG+ E +P++V L VA G+ +T +V G VY FG G
Sbjct: 268 FTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 327
Query: 340 SASLGHNA 347
S LG+ +
Sbjct: 328 SGQLGNRS 335
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 14/264 (5%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
AIA G HS+A+T G V S+G N GQLG T + P+ IRSL ++Q A G
Sbjct: 90 AIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNN 149
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G+ GV+ + ++ P + +L I + A G +
Sbjct: 150 HSLALTSCGELYSWGSNIYGQL--GVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSF 207
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ V+ F N +LG + E N P L TL + V +A G + + L +
Sbjct: 208 LISKSSAVFGFGRNNCGQLGLNDESNRAYPTQL-KTLRTLGVRFVACGDEFSVFLTNEG- 265
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHGS T+E PR++ +L+ VA G H A+V GRV
Sbjct: 266 --GVFTCGAGTYGQLGHGSNTNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 321
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG+ + ++P+ V
Sbjct: 322 GFGLGSSGQLGNRSTNSVTLPQEV 345
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 34/297 (11%)
Query: 64 VYSFGSNSSGQLGHGTTEEE---------WRPR-PIRSLQGIRIIQAAAGAGRTMLISDA 113
++ +G+ S GQLG G E+E W+P P+R Q A G T+ ++
Sbjct: 3 LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLR--------QIACGHRHTLFLTAN 54
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA G + + + + + P L+ L+N VV A G+ + L+ G+V
Sbjct: 55 GKVYACGNNDQAQLGHNLPTKR----PLLIPELQNYVVVAIACGSRHSMALTEWGQV--L 108
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG++ +LG T+ + +E ++ +L + VVQIA G + LAL S +YS G
Sbjct: 109 SWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT---SCGELYSWGS 165
Query: 232 GLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
+ G+LG + H + LL + +A G H+ ++ + V +G+GR C
Sbjct: 166 NIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV--FGFGRNNC 223
Query: 291 --LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
LG +E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 224 GQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGH 280
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR---PRPIRSLQGIRIIQAAAG 103
Q G HS+A+TS G +YS+GSN GQLG +E P + +L GI + A G
Sbjct: 143 QIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACG 202
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ LIS + V+ FG+++ G+ G+ P +++L+ + V A G+ F+
Sbjct: 203 GNHSFLISKSSAVFGFGRNNCGQL--GLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVF 260
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+ EG V+T G +LGH + N++ P ++ L + Q+A G + LAL PS
Sbjct: 261 LTNEGGVFTCGAGTYGQLGHGSNTNEMLPR-MVMELMGSTITQVACGNRHTLALV--PSR 317
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPR 249
VY G G G+LG+ S P+
Sbjct: 318 GRVYGFGLGSSGQLGNRSTNSVTLPQ 343
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS ++ V+ FG N+ GQLG P +++L+ + + A G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVPSRGR 319
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG 197
VY F G+ +LG+ + + P +LG
Sbjct: 320 VYGFGLGSSGQLGNRSTNSVTLPQEVLG 347
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 23/281 (8%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
H+ AVT G +Y++G +++SG LGHG W P+ + L+GI + + G T ++
Sbjct: 418 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 477
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
+ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 478 TSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVG 535
Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G+ RLGH + + P + L QIA G+C +AL
Sbjct: 536 NSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT-CVAALVEPNFCQIACGHCMTVALT 594
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG VY++G + G+LG+ + D P +E N ++ GA+H AV+
Sbjct: 595 T--SGH-VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFV-EEISCGAYHVAVLTSRT 649
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + S P +V++L D + V G
Sbjct: 650 EVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCG 690
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 403
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG R PR +E + L+ V
Sbjct: 464 VSAISCGPWHTAIVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 518
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 519 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 578
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+A G T ++ G VY+ G LG N ADG +
Sbjct: 579 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGML 619
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 148/357 (41%), Gaps = 41/357 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 470 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 529
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 587
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 588 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 646
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 647 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAICIHKWV 703
Query: 274 VGQDGRVCT-------WGWGRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGD 320
G D +C+ R+ C H +S+ K A N K V
Sbjct: 704 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSL-KASLAPNPNKPYRVCDSC 762
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRHL 377
Y+ + D YS S G N D + L L +L S++H+
Sbjct: 763 YSKLNKGPETDRYSSAKRGSVIQGFNDSVDEE----LETKSNAQLSRLSSLESFKHM 815
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C + V S+G + G+LG+ + +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G V S G LG N +DG++ L+
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG-NPNSDGRLPCLV 344
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
R G V F+WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+Y+ G G G LGHG TD H P+ I L L V+ G WH A++ G+
Sbjct: 148 GELYTWGDGTHNVGLLGHG--TDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQ 204
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------- 328
+ T+G G +G LGHGN S PK V++L+ +K I VA G + T + E
Sbjct: 205 LFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264
Query: 329 DGDVYSFGCGESASLGH 345
G ++++G G+ LGH
Sbjct: 265 AGKLFTWGDGDKHRLGH 281
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G ++ +G N GQLG + P +L +R +Q G I+ G+V A G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT V +P L+ES++++F+ + AI G LS EG VY++ G D
Sbjct: 3996 GA--GGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDG 4053
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P + +L VV IAAG + AC S +YS G G G+LGH
Sbjct: 4054 KLGHGNRSPCDRPRAI-ESLRGKEVVDIAAGGAHS---ACITSTGELYSWGKGRYGRLGH 4109
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L++ + + V +G + D V +WG G YG LG G +
Sbjct: 4110 GDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 4169
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP + AL + I V G + +++ G VY++G G+ LGH
Sbjct: 4170 KVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4215
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 10/285 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++++G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4030 SGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSAC 4089
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y++GK +G +G ++ T P+LV++LK V A G+ T ++ +
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHG--DSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDD 4147
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + L+ + V+++ G + +AL SG AVY
Sbjct: 4148 DSVWSWGDGDYGKLGRGGSDGCKVPMK-IDALQGLGVIKVECGSQFSVALT--KSG-AVY 4203
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + PR Q + V +A G+ H G V TWG
Sbjct: 4204 TWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKI--VSIACGSLHCVACTDAGEVYTWGDND 4261
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G LG G P++V AL K VA G + S + V
Sbjct: 4262 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPV 4306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ R+ A G +
Sbjct: 3009 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAA 3068
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I G +Y +G +G +G T+L P+LV++L+ V+Q A+G + T L+
Sbjct: 3069 IISNGDLYTWGLGEYGRLGHGDNTTQL--RPKLVKALEGQRVIQVALGSRDAQTLALTDS 3126
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG PHP+ L + V QI G + LAL SG V+
Sbjct: 3127 GTVYSWGDGDFGKLGRGGSEGCSVPHPI-ERLNGVGVCQIECGAQFSLALT--KSGQ-VW 3182
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+L+E + + VA GA H V +G+V WG
Sbjct: 3183 TWGKGDYFRLGHGTDAHVRKPQLVETLK--GKKVTHVAVGALHCLSVLDNGQVYAWGDND 3240
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+ P +VQ L K VA G
Sbjct: 3241 HGQQGNSTTTVNRKPALVQGLEGCKISRVACG 3272
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 9/303 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQG--IRIIQAAAG 103
Q + G VT G +++ G ++G+LG G + +PR + SL I+ + +G
Sbjct: 2951 QIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSG 3010
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
M ++ G+V+++G+ G+ G P+L+E+L++ V A G +A
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAA 3068
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ G +YT+ G RLGH + P L+ LE V+Q+A G LA SG
Sbjct: 3069 IISNGDLYTWGLGEYGRLGHGDNTTQLRPK-LVKALEGQRVIQVALGSRDAQTLALTDSG 3127
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VYS G G GKLG G P IE+ + + + GA + + + G+V TW
Sbjct: 3128 -TVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV--CQIECGAQFSLALTKSGQVWTW 3184
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G Y LGHG + P++V+ L K HVA G V ++G VY++G +
Sbjct: 3185 GKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQ 3244
Query: 344 GHN 346
G++
Sbjct: 3245 GNS 3247
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 89 IRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
I +L I II+ AA + + ++ G VY++G FG+ +G T SP L+ L
Sbjct: 470 ISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHG--DTVTCDSPMLINEL 527
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
VV A G+ +A ++ G ++T+ G+ RLG + + + P L+ L + VV
Sbjct: 528 HGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTP-ALVSGLLGVTVVD 586
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+A G +A +G +VYS G G GKLG G K P+L+++ Q L++ V
Sbjct: 587 VACGSGDAQTIALADTG-SVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDV--TRVYC 643
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G ++A V ++G V TWG G LGHG EE P+ V+ L ++ G +
Sbjct: 644 GPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLAT 703
Query: 327 SEDGDVYSFGCGESASLGH 345
+E+G++ S+G + LG
Sbjct: 704 TEEGELLSWGRNDKGQLGE 722
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 7/288 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P +L ++ +Q G+ ++ G+++A G+ +
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEAT 2975
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ V P+ + SL + + A+ G L+ +G+V+++ G+D +L
Sbjct: 2976 NGRLGLGISAGN-VPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3034
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + N +P L+ L + V IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3035 GHFSRMNCDKPR-LIEALRSKRVRDIACGGSHSAAII---SNGDLYTWGLGEYGRLGHGD 3090
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
T + P+L++ + + V + + + G V +WG G +G LG G E SV
Sbjct: 3091 NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSV 3150
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
P ++ LN V + G + +++ G V+++G G+ LGH A
Sbjct: 3151 PHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDA 3198
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+TS+G VYS+G+ G+LGHG T P I L G ++ A G+ + I+ +
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITAS 548
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G+++ +G+ SFG G+ T+ + +P LV L + VV A G+ T L+ G VY
Sbjct: 549 GELFTWGRGSFG--RLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVY 606
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G +LG P L+ L+ + V ++ G Y A+ C+ AV++ G
Sbjct: 607 SWGDGEYGKLGRGGSEGCKAPK-LVDKLQGLDVTRVYCGPQYSAAV-CK--NGAVFTWGN 662
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G KLGHG+ + PR +E L ++ G+ H ++G + +WG G L
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVE--TLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQL 720
Query: 292 GHGNEECESVPKVVQAL 308
G G+ ++ P +L
Sbjct: 721 GEGHTGLKAEPAFAASL 737
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 148/316 (46%), Gaps = 11/316 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q I G ++T G V + G + G+LG G T+ P I S+Q + I + A +G
Sbjct: 3973 QLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGG 4032
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P+ +ESL+ VV A G +A +
Sbjct: 4033 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRAIESLRGKEVVDIAAGGAHSACI 4090
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +Y++ G RLGH + +P L+ L+ V +A G L C
Sbjct: 4091 TSTGELYSWGKGRYGRLGHGDSEDQTKPK-LVDALKGYRVTDVACGSGDAQTL-CITDDD 4148
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+V+S G G GKLG G K P I+ Q L + + V G+ + + + G V TWG
Sbjct: 4149 SVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGV--IKVECGSQFSVALTKSGAVYTWG 4206
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG E+ P+ L K + +A G ++ G+VY++G + LG
Sbjct: 4207 KGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG 4266
Query: 345 H---NAIADGQVCSLL 357
NAI ++ + L
Sbjct: 4267 DGTTNAIQRPRLVAAL 4282
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G HS A+T+ G ++++G S G+LG G+TE+ P + L G+ ++ A G+G +T+
Sbjct: 538 GSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTI 597
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D G VY++G +G + G G++ +P+LV+ L+ + V + G ++A + + G
Sbjct: 598 ALADTGSVYSWGDGEYG--KLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNG 655
Query: 169 RVYTFSWGNDARLGHHTE-----PNDVE 191
V+T+ G +LGH TE P VE
Sbjct: 656 AVFTWGNGEGYKLGHGTEEHVRFPRQVE 683
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 18/251 (7%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
IIQ A + +++ G+VY + ++ + + +L +I +++ A
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEIS------------TLADIEIIKLAA 483
Query: 157 GN--FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ L+ EG VY++ G+ +LGH P L+ L VV +A G +
Sbjct: 484 HSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPM-LINELHGKSVVNVACGSHHS 542
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
A+ SG +++ G G G+LG GS D P L+ + + V +G +
Sbjct: 543 AAITA--SG-ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIAL 599
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V +WG G YG LG G E PK+V L + V G + V ++G V++
Sbjct: 600 ADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFT 659
Query: 335 FGCGESASLGH 345
+G GE LGH
Sbjct: 660 WGNGEGYKLGH 670
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
++A+T G VYS+G G+LG G +E P PI L G+ + Q GA ++ ++
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK 3177
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
+GQV+ +GK + +G V PQLVE+LK V A+G + G+VY
Sbjct: 3178 SGQVWTWGKGDYFRLGHGTDAH--VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYA 3235
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ + + G+ T + +P L+ LE + ++A G + +A
Sbjct: 3236 WGDNDHGQQGNSTTTVNRKP-ALVQGLEGCKISRVACGSSHSIA 3278
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHGT +P+ + +L+G ++ A GA
Sbjct: 3164 QIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALH 3223
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ + D GQVYA+G + G + G T + P LV+ L+ + + A G+
Sbjct: 3224 CLSVLDNGQVYAWGDNDHG--QQGNSTTTVNRKPALVQGLEGCKISRVACGS 3273
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G +IA+ G VYS+G G+LG G +E P+ + LQG+ + + G +
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAA 650
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G + +G + + V P+ VE+L V ++G+ + EG
Sbjct: 651 VCKNGAVFTWGNGEGYKLGHGTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708
Query: 170 VYTFSWGNDAR 180
+ SWG + +
Sbjct: 709 L--LSWGRNDK 717
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP +S AV G V+++G+ +LGHGT E PR + +L G + + G+ +
Sbjct: 644 GPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLAT 703
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G++ ++G++ G+ G G K P SL ++ + T SR R
Sbjct: 704 TEEGELLSWGRNDKGQLGEGHTGLK--AEPAFAASLLGKCIIGITCSSAQTFAWSRPSR 760
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++ + W + + H P + PL L++I +Q+A LL L +
Sbjct: 407 LFAWGWLSTSDATCHNTPTTI---PLPNDLDDI--IQVACSSNSLLIL-----------L 450
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAVVGQDGRVCTWGWGR 287
G K+ + + H E L +++ + +AA + H + +G V +WG G
Sbjct: 451 RTGRVYKMTNSAEPQSMH----EISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGD 506
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LGHG+ P ++ L+ ++VA G + + ++ G+++++G G LG +
Sbjct: 507 FGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGS 566
Query: 348 IAD 350
D
Sbjct: 567 TED 569
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H ++V G VY++G N GQ G+ TT +P ++ L+G +I + A G+ ++
Sbjct: 3220 GALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSI 3277
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 167 -----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + +L Q+A G+C+ +
Sbjct: 489 MVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVASLVEPNFCQVACGHCFTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALT---TSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + + P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G+VY++G++S G +GV V P+LVE+
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLVEA 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WGN LGH E + P L G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLLGHGNEVSHWMPKRLNGPLEG 417
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRT 472
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG+++ VP V +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLV 532
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG V
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADGMV 575
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G G +G + T+LV P V SL Q A G+
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVASLVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
FT L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGVDQSMCS 668
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 42/329 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IAV S VYS+GS+ GQLGHGT + RP+ I L G +I AAG ++
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-------VVQAAIGNFFTA 162
+ +G++++FG FG+ G +K + + + ++ + Q A G +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ S G VY++ G +LGH N +P L+ TL V +I+ G+ + +A +
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPR-LIETLRG--VTKISCGHFHTVATTDLKN 1361
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
VYS G G KLGH S DE P++++ F N+ VV G H +
Sbjct: 1362 ---VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVV--CGQNHTMTITFPDDLNN 1416
Query: 275 -GQDGR------------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHV 316
QD + WG +G LG G + + +P ++ +N + I +
Sbjct: 1417 SNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDI 1476
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ G + +++ + +Y +GCG +G+
Sbjct: 1477 SCGSDFSAMITSNNAIYVWGCGRFGQIGN 1505
Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 40/326 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIR-IIQAAAGAGRT 107
G H +T G +Y++GSN SGQLGHG + P+ + +G I G T
Sbjct: 1130 GWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHT 1189
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ + VY++G D FG+ +G + + P+++E L + A G VL +
Sbjct: 1190 IAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248
Query: 168 GRVYTFSWGNDARLG---HHTE--PNDVEPHPLLGTLENI---PVVQIAAGYCYLLALAC 219
G +++F +G+ +LG H++ P +E + ++G L++ + QIA G+ + ++ C
Sbjct: 1249 GELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH--SVIC 1306
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+G VYS G G G+LGH + PRLIE + + ++ G +H
Sbjct: 1307 SENG-EVYSWGLGKQGQLGHKVFENISKPRLIETLRGV----TKISCGHFHTVATTDLKN 1361
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS----------ED 329
V +WG G + LGH +++ ESVPKVV V G T ++ +D
Sbjct: 1362 VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDD 1421
Query: 330 GD-----------VYSFGCGESASLG 344
D +Y++G E LG
Sbjct: 1422 EDEENMNGKSSSPIYAWGSAEHGKLG 1447
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 21/270 (7%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVV 152
+ I+ + G +I+D G++Y +G + G+ +G++ K ++ P+ V+ + IF+V
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ G AV + + +SWG+D +LGH T+ + ++ L + IAAG
Sbjct: 1183 ECG-GEHTIAV---DSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAG 1238
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQP------VV 263
+ + + L + SG ++S G G G+LG GS + P IE ++ LQ
Sbjct: 1239 FAHNIVL--KKSG-ELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQ 1295
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+A G H+ + ++G V +WG G+ G LGH E S P++++ L V I + G + T
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKI--SCGHFHT 1353
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQV 353
++ +VYS+G GE LGH++ D V
Sbjct: 1354 VATTDLKNVYSWGSGEHMKLGHSSDKDESV 1383
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 41/297 (13%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQ---GIR 96
QAIA G H+I + G ++SFG GQLG G+ + P I LQ G +
Sbjct: 1233 QAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGK 1292
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I Q A G G +++ S+ G+VY++G G+ + V + ++ P+L+E+L+ V + +
Sbjct: 1293 ITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKV--FENISKPRLIETLRG--VTKISC 1348
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+F T + VY++ G +LGH ++ ++ P + ++ V ++ G + +
Sbjct: 1349 GHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNHTMT 1407
Query: 217 LACQ------------------PSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQ 253
+ S +Y+ G GKLG G D+ P I+
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG 1467
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
LNL + ++ G+ +A++ + + WG GR+G +G+G + VP + +LND
Sbjct: 1468 VNSLNL--IDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI-SLND 1521
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 13/295 (4%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
++G HS+ + S G V S G NS GQLG T +P I +L+ + + + G ++
Sbjct: 1 MSGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 60
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G+V+A+G S E + G+ K T P+ +++L +I ++Q A G++ + LS +
Sbjct: 61 AVCHKGRVFAWGAAS--EGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118
Query: 168 GRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 119 GQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSGTSF 175
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
S G G+ + P L+ + L++ V ++ G H AV+ QDG+V T+G
Sbjct: 176 GWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSV--VFISCGYEHTAVLTQDGKVFTFG 233
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
YG LGH + + P++V+ + + + + G Y T V G V SFG G
Sbjct: 234 DNSYGQLGHDSTAEKRGPQLVERIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRG 287
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 25/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L I+IIQ A G ++
Sbjct: 55 GKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLA 114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 115 LSEDGQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 173
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WG++ A G++ +P L+G L+ + VV I+ GY + L
Sbjct: 174 --SFGWGSNNAGQLALSGNNAPVQRYKP-VLVGALKTLSVVFISCGYEHTAVLT---QDG 227
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
V++ G G+LGH S +++ P+L+E+ + L Q + G++H A V G+V ++
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQ---IDCGSYHTLAYVYTTGQVVSF 284
Query: 284 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G G GC E V ++ A L DV+ H+ G Y FV +
Sbjct: 285 GRGP-GCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGTYANFVTT 334
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 104 QVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 163
Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S +G + +G ++ G+ A G P LV +LK + VV + G TAVL
Sbjct: 164 HSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+++G+V+TF + +LGH + P L+ +E + V QI G + LA
Sbjct: 224 TQDGKVFTFGDNSYGQLGHDSTAEKRGPQ-LVERIEGL-VSQIDCGSYHTLAY------- 274
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
VY+ G + G G HP + +
Sbjct: 275 -VYTTGQVVSFGRGPGCTRSSPHPEALAE 302
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
+G ++L+ G V + G +S G+ G +GT P+ + +L+ + V + G +
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+ +GRV+ + ++ +LG + TL +I ++Q+A G+ + LAL+
Sbjct: 60 LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALS--- 116
Query: 222 SGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
V+S G G+LG G + P+ + + + L VAAG H+ + G
Sbjct: 117 EDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALSLSGTS 174
Query: 281 CTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
WG G L G+ P +V AL + + ++ G T V+++DG V++FG
Sbjct: 175 FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGD 234
Query: 338 GESASLGHNAIADGQ 352
LGH++ A+ +
Sbjct: 235 NSYGQLGHDSTAEKR 249
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSN++GQL G+ + ++P + +L+ + ++ +
Sbjct: 156 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISC 215
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG +S+G + G T PQLVE ++ + V Q G++ T
Sbjct: 216 GYEHTAVLTQDGKVFTFGDNSYG--QLGHDSTAEKRGPQLVERIEGL-VSQIDCGSYHTL 272
Query: 162 AVLSREGRVYTFSWGND-ARLGHH----TEPNDVEPHPLLGTLENIPVVQIAAG 210
A + G+V +F G R H E +DV LE++ V I AG
Sbjct: 273 AYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAG 326
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P +++L + I+QAA G
Sbjct: 44 VAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ + D G+ YA+G + +G+ + G + + PQ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQ--RCAPKLVVRQVAAGGT 161
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 218
+ VL+REG V+T+ G P D++ + ++ + V+ IA G + LAL
Sbjct: 162 HSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLAL- 212
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
Q G +++ G G+LG G P ++ L L V +AAG WH+ + DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDG 268
Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V WG G +G LG G+ + S VP+ V L + ++ G + +++DG ++SFG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG 328
Query: 337 CGESASLGH 345
G+ LG+
Sbjct: 329 RGDHGRLGY 337
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 19/288 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ ++G+ GQLG G EE+ + +L+ ++ AG+ ++ I D G+++ +G +
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPAE-TKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 184 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
E D L + + V Q+AAG + + L + V++ G
Sbjct: 126 EPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT----WGQP 178
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 179 WPPGDIKQISVPVRVQGLEKVKL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 234
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+ + + +A G + + +++DG+VY +G GE LG
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 267
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY +G+ G +G PQ V L +VQ + G + L+++GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSF 327
Query: 174 SWGNDARLGHHTE---------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
G+ RLG+ + P D+ P L E A G+ +AC
Sbjct: 328 GRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEE------AEGHWIAKLVAC 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++ + G G G+LG G +++ ++ + ++ VV AG+ ++ + DG++ TWG
Sbjct: 6 SLIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVV--AGSRNSLAICDDGKLFTWG 63
Query: 285 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
W + G LGH E + E++P V+ALN+V + A G + V + G Y++G E
Sbjct: 64 WNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 344 GH 345
G
Sbjct: 124 GE 125
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 280 VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WG G G LG G NEE E V VV AL K V G + + +DG ++++G
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWV-CVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWN 65
Query: 339 ESASLGHNA 347
+ +LGH A
Sbjct: 66 QRGTLGHPA 74
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ V S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3158
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3159 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3216
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALSGRRVIQVACGSRDAQTLALTEDG-A 3274
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3332
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWG 3383
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P ++ + + A G+ V+S++G+VY G + RLG N
Sbjct: 3076 GLKGSK-VKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNV 3134
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+R+ PR
Sbjct: 3135 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRSTLDKPR 3192
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ + A G+ H+A + G + TWG G YG LGHG+ + PK+V AL+
Sbjct: 3193 LVEALRAKKIRDI--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALS 3250
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 3251 GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3287
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4215 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4274
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ +G VY + G D +
Sbjct: 4275 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4332
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4333 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4388
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4389 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4446
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4447 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4496
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3155 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAA 3214
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L V+Q A G + T L+ +
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVAALSGRRVIQVACGSRDAQTLALTED 3272
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 3328
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3329 TWGKGDYYRLGHGGDQHVRKPQPIAGLR--GHRVIHVAVGALHCLAVTDAGQVYAWGDND 3386
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3387 HGQQGSGNTFVNKKPALVIGLDAVIVNRVACG 3418
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+IQ A G+ +T+
Sbjct: 3208 GSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTL 3267
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ G V+++G FG + G G++ ++P +E L I V+Q G F+ L+R G
Sbjct: 3268 ALTEDGAVFSWGDGDFG--KLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAG 3325
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ G+ RLGH + + +P P+ G L V+ +A G + LA+ VY+
Sbjct: 3326 EVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVT---DAGQVYA 3381
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVG 275
G G+ G G+ K P L+ + L V+ VA G+ H+ G
Sbjct: 3382 WGDNDHGQQGSGNTFVNKKPALV-----IGLDAVIVNRVACGSSHSMAWG 3426
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T+ G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4308 SGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 4367
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4368 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4425
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4426 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4481
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4482 TWGKGDFHRLGHGSVEHVRRPKKVAALQGKKI--ISIATGSLHCVACSDAGEVFTWGDND 4539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4540 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P ++ +R I A G+ ++S G+VYA G+
Sbjct: 3062 TVMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3121
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3122 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3180 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3235
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3236 DNATQLKPKLVAA--LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3293
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
S P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 3294 SSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4260 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4319
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4320 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4377
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4378 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4435
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L L + V G+ + + + G V TWG G + LGH
Sbjct: 4436 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4493
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ E PK V AL K I +ATG S+ G+V+++G + LG DG V
Sbjct: 4494 GSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-----DGTV 4548
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4549 TAIQRPRLVAALQ 4561
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 98/174 (56%), Gaps = 13/174 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G +Y++G + G+LGHGT++++ P + +L+ +++ A G+G T+
Sbjct: 705 GCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTL 764
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G + L+ PQL++ L + V A G F+ LS EG
Sbjct: 765 CLTSEGLVFAWGDGDYGKLGNGSCNSSLL--PQLIDCLPRVQRVFA--GAQFSLALSCEG 820
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
++Y SWG + LGH +V+ P + G L++ +V +A G + LAL+
Sbjct: 821 QLY--SWGKASCLGHQLVERNVQGCSVPRLITG-LQHKRIVDVAVGVAHCLALS 871
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 211
Q A +LS+EG++Y + H + EP L + N + IAA +
Sbjct: 604 QVACSEDVVLLLSKEGKLYNW----------HIAKPEAEPQQLDFAEIANETFISIAA-H 652
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
C S YS G G +LGHG + P IE L V G ++
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRLVKS---VYCGCSYS 709
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSED 329
A + G + TWG G YG LGHG + + +P +V AL D + + VA +GD T ++ +
Sbjct: 710 AAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769
Query: 330 GDVYSFGCGESASLGH 345
G V+++G G+ LG+
Sbjct: 770 GLVFAWGDGDYGKLGN 785
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 17/238 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 112
H +AV S YS+G S +LGHG P I SL +R++++ G + I+
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITL 714
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G +Y +G+ ++G +G + + P +V +LK+ VV A+ G+ T L+ EG V
Sbjct: 715 GGNLYTWGRGTYGRLGHGTSDDQCL--PAMVMALKDHQVVDVALGSGDAHTLCLTSEGLV 772
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 229
+ + G+ +LG+ + + + P ++ +P VQ + AG + LAL+C+ +
Sbjct: 773 FAWGDGDYGKLGNGSCNSSLLPQ----LIDCLPRVQRVFAGAQFSLALSCEGQLYSWGKA 828
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
C LG +L + PRLI Q + V VA G H + G + +GWGR
Sbjct: 829 SC-LGHQLVERNVQGCSVPRLITGLQHKRI--VDVAVGVAHCLALSSSGEI--FGWGR 881
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 20/234 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P +ESL + V G ++A ++ G +YT+ G RLGH T + P ++ L
Sbjct: 689 PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLP-AMVMAL 746
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
++ VV +A G L G+ V++ G G GKLG+GS P+LI+ +
Sbjct: 747 KDHQVVDVALGSGDAHTLCLTSEGL-VFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ- 804
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIH 315
V AGA + + +G++ + WG+ CLGH N + SVP+++ L + +
Sbjct: 805 ---RVFAGAQFSLALSCEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVD 859
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWL 369
VA G +S G+++ +G + + I VCS L Q +Q+ L
Sbjct: 860 VAVGVAHCLALSSSGEIFGWGRND-----NQQICPASVCSEPLLR--QPIQVTL 906
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G F AV S Y++ G+ RLGH D L +E++ V + + YC
Sbjct: 655 GRHFLAVDS-NFNAYSWGVGDSRRLGH----GDCHARELPTKIESL-VRLVKSVYCGCSY 708
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A G +Y+ G G G+LGHG+ D+ P ++ + + V + +G H +
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTS 768
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G V WG G YG LG+G+ +P+++ L V+ V G + +S +G +YS+
Sbjct: 769 EGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ--RVFAGAQFSLALSCEGQLYSW- 825
Query: 337 CGESASLGHNAIADG-QVCSL 356
G+++ LGH + Q CS+
Sbjct: 826 -GKASCLGHQLVERNVQGCSV 845
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++ +TS+G+V+++G G+LG+G+ P+ I L R+ + AGA ++
Sbjct: 758 SGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLP--RVQRVFAGAQFSLA 815
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y++GK S G E VQG + P+L+ L++ +V A+G LS
Sbjct: 816 LSCEGQLYSWGKASCLGHQLVERNVQGCSV---PRLITGLQHKRIVDVAVGVAHCLALSS 872
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-----TLENIPVVQIA 208
G + F WG + P V PLL TL +P IA
Sbjct: 873 SGEI--FGWGRND--NQQICPASVCSEPLLRQPIQVTLPTLPASGIA 915
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 22/312 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS+ + G V+++G N +GQLG GTT ++ L+ ++ AAG
Sbjct: 40 QISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLE--DVVSIAAGWEH 97
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ + G V+A+G + FG+ G + +P V+++K++ + A G + + L
Sbjct: 98 NLAVKSDGTVWAWGNNRFGQLGDGTNENR--NTPVKVKTIKDVTEIDA--GFYHSIALQS 153
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V+ WGN+ +LG T+ + +P + G L N VV ++ G + L L +
Sbjct: 154 DGTVWV--WGNNELDQLGDGTKSDAYKPMQVQG-LNN--VVAVSGGNHHNLVLKADGT-- 206
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++ G G+LG G+ T+ P + F V +A+G + V DG + WG
Sbjct: 207 -IWGWGANGYGQLGDGTMTESSIPTPVYDFN----GAVFIASGNNYNVAVKADGSIWGWG 261
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG+G + +P + LN+ ++ +ATG Y ++ +DG V S G + LG
Sbjct: 262 MNTYGQLGNGTQTNSKIPIRINGLNN--SVSIATGGYHALILQQDGTVLSMGYNRTGQLG 319
Query: 345 HNAIADGQVCSL 356
A ++ Q +L
Sbjct: 320 TGATSNYQYTTL 331
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 19/296 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV S G V+++G+N GQLG GT E P +++++ + I AG ++
Sbjct: 93 AGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKDVTEID--AGFYHSIA 150
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G + + G + P V+ L N+ V GN VL +G
Sbjct: 151 LQSDGTVWVWGNNELDQLGDGTKSDAY--KPMQVQGLNNVVAVSG--GNHHNLVLKADGT 206
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++ + +LG T P P+ + V IA+G Y +A+ S ++
Sbjct: 207 IWGWGANGYGQLGDGTMTESSIPTPV---YDFNGAVFIASGNNYNVAVKADGS---IWGW 260
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+G++T+ K P I V +A G +HA ++ QDG V + G+ R G
Sbjct: 261 GMNTYGQLGNGTQTNSKIPIRINGLN----NSVSIATGGYHALILQQDGTVLSMGYNRTG 316
Query: 290 CLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G + V L+DV + +A G Y + + +DG ++++G E LG
Sbjct: 317 QLGTGATSNYQYTTLKVHGLSDV--VSIAAGYYHSLALKKDGTIWAWGNNEYGQLG 370
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 17/265 (6%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
++ ++ AG HSIA+ S G V+ +G+N QLG GT + ++P ++ L ++ +
Sbjct: 136 KDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN--NVVAVSG 193
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G +++ G ++ +G + +G+ G + +P + + +F+ A GN +
Sbjct: 194 GNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPTP-VYDFNGAVFI---ASGNNYNV 249
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ +G ++ + +LG+ T+ N P + G L N V IA G + AL Q
Sbjct: 250 AVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRING-LNN--SVSIATGGYH--ALILQQD 304
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
G V S+G G+LG G+ ++ ++ L ++ L VV +AAG +H+ + +DG +
Sbjct: 305 G-TVLSMGYNRTGQLGTGATSNYQYTTL----KVHGLSDVVSIAAGYYHSLALKKDGTIW 359
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
WG YG LG G + +P + Q
Sbjct: 360 AWGNNEYGQLGDGTLNYKKLPILSQ 384
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V QI+ G + L L +P G V++ G G+LG G+ +PR Q+ L+ VV
Sbjct: 38 VPQISGGGSHSLVL--KPDG-TVWAWGGNHAGQLGDGTT----NPRKFA-IQVKGLEDVV 89
Query: 264 VAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
A W H V DG V WG R+G LG G E + P V+ + DV I G Y
Sbjct: 90 SIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKDVTEIDA--GFYH 147
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ + DG V+ +G E LG +D
Sbjct: 148 SIALQSDGTVWVWGNNELDQLGDGTKSD 175
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 33/323 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA G
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G +++ G G+LG G +P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGH-NAIADGQVCSL 356
FG G+ LG+ + GQ L
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLEL 348
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK ++P LV+SL N+ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 184 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
EP+ E P+ + + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG 281
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG G +E + + VV AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C + V S+G + G+LG+ + +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G V S G LG N +DG++ L+
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG-NPNSDGRLPCLV 344
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 165
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
R G V+T WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 224 MAVYSVGCGLG--GKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+Y+ G G G LGHG TD H P+ I L L V+ G WH A++ G+
Sbjct: 148 GELYTWGDGTHNVGLLGHG--TDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQ 204
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------- 328
+ T+G G +G LGHGN S PK V++L+ +K I VA G + T + E
Sbjct: 205 LFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264
Query: 329 DGDVYSFGCGESASLGH 345
G ++++G G+ LGH
Sbjct: 265 AGKLFTWGDGDKHRLGH 281
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 135/259 (52%), Gaps = 10/259 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQ--LGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
+Q G H++AVT +G V +G N GQ L G +E++ +PR ++SL ++ Q A G
Sbjct: 91 TQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACG 150
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 162
+ +M ++ G+++A+G +SFG+ G G L PQ + SL + + + A G + +
Sbjct: 151 SMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSF 210
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
LS G V+ + N +LG T + V P P L L+ V IA G Y L S
Sbjct: 211 ALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTP-LKNLKTKQVKYIACGQNYTAILTA--S 267
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 281
G ++ G G G+LGHGS ++E +PR ++ F L + VA G H V+ G+ GR
Sbjct: 268 G-GLFLFGQGSEGQLGHGSHSNEVNPRSVQGF--LGSEITQVACGRQHTLVLEGRTGRFF 324
Query: 282 TWGWGRYGCLGHGNEECES 300
+ G G G LG N+ +S
Sbjct: 325 SLGQGSKGQLGLDNDSSKS 343
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ + G V G+N GQLG E P + + + I Q + G T+ ++D
Sbjct: 49 HTCVLLRDGTVMMCGANDRGQLGQDRPGSELAHVP--ATETLVITQVSCGNDHTLAVTDR 106
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
GQV +G++ G+ ++ P+ ++SL + V Q A G+ + L+R+GR+ F
Sbjct: 107 GQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRI--F 164
Query: 174 SWGNDA--RLGHHTEPNDV-EPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+WG+++ +LG + HP L +L +P+ ++A G + AL+ SG AV+
Sbjct: 165 AWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSV--SG-AVFGW 221
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ D P ++ + ++ +A G + A++ G + +G G G
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLKNLKTKQVK--YIACGQNYTAILTASGGLFLFGQGSEG 279
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLG 344
LGHG+ E P+ VQ + VA G T V+ G +S G G LG
Sbjct: 280 QLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLG 335
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 17/292 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
V+S+G GQLG ++ PR + +L G +I + + G T ++ G V
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
G + G+ G++L P + + + + Q + GN T ++ G+V WG +
Sbjct: 63 GANDRGQLGQDRPGSELAHVP----ATETLVITQVSCGNDHTLAVTDRGQV--LGWGRND 116
Query: 180 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
R G T ++ + P L +L + V Q+A G + +AL +++ G G+
Sbjct: 117 RGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALT---RDGRIFAWGDNSFGQ 173
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
LG G+ + +Q L P+ +A G WH+ + G V WG G LG G
Sbjct: 174 LGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGT 233
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
E P ++ L + ++A G T +++ G ++ FG G LGH +
Sbjct: 234 TEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGS 285
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 45/338 (13%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS A++ G V+ +G N+ GQLG GTTE+ P P+++L+ ++ A G T +++ +
Sbjct: 208 HSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTAS 267
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS-REGRVYT 172
G ++ FG+ S G+ +G ++ +P+ V+ + Q A G T VL R GR ++
Sbjct: 268 GGLFLFGQGSEGQLGHGSHSNEV--NPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFS 325
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G+ +LG + + P+ G E + + + S + S+ G
Sbjct: 326 LGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSN--------GEESRSIIGSIFAG 377
Query: 233 LGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAA------------------- 272
SR D HP + + +++PVV+
Sbjct: 378 GDQSFCIVSRGNDPDHPLDFRE-AIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMA 436
Query: 273 -----------VVGQ-DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+VG G + +G G G LGHG+ E P+ V+ + VA G
Sbjct: 437 LSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGR 496
Query: 321 YTTFVVS-EDGDVYSFGCGESASLGHNAIADGQVCSLL 357
T V+ G YS G G LG + + SL+
Sbjct: 497 QHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLV 534
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G ++ +T+ G ++ FG S GQLGHG+ E PR ++ G I Q A G T+++
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316
Query: 111 S-DAGQVYAFGKDSFGEAEYGVQGTKLVTSP--------QLVESLKNIFVVQAAIGNFFT 161
G+ ++ G+ S G+ +K SP E N ++ IG+ F
Sbjct: 317 EGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFA 376
Query: 162 AVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTL-----ENIPVVQIAAGYCYL 214
+ S GND L +EP L L E+ P+++ + L
Sbjct: 377 G---GDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTL 433
Query: 215 -LALACQPSGMAVYSVGCGLGG----------KLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+AL+ A + VG G GG +LGHGS ++E +PR ++ F L +
Sbjct: 434 EMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDF--LGNEITQ 491
Query: 264 VAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
VA G H V+ G+ G + G G G LG N +S +V
Sbjct: 492 VACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLV 534
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L L+ AC N+ + G G G ++ FG S GQLGHG+ E PR +
Sbjct: 432 TLEMALSSPACL---NASFLVGAG-------SGGLFLFGQGSEGQLGHGSHSNEVNPRSV 481
Query: 90 RSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGE 126
+ G I Q A G T+++ G Y+ G+ S G+
Sbjct: 482 KDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQ 519
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 15/289 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+ VT G + + G N +GQLG G E ++ + I + AAG T+
Sbjct: 112 GGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADV--AAGFWHTLAA 169
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S G++YA+G + G+ + KL PQ + L++ + Q A G++ + L+++G V
Sbjct: 170 SKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEV 229
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
YT+ +G RLGH + ++ P + + ENI I AG+ Y + A SG V+
Sbjct: 230 YTWGFGAHGRLGHGSTEDEFMPKRVEALVGENIS--SIHAGFEY--SSAVSTSG-KVFVW 284
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G LG G + D+ P +++ F Q +A G++HAA V G + TWG +G
Sbjct: 285 GYGHFYVLGQGDKKDQLAPVVLD-FPTSIRQ---LAFGSFHAAAVSHSGMLFTWGHATHG 340
Query: 290 CLGHGNEECESV--PKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 335
LGHG + + P V+ A ++ + VA G T VV+ GDV+SF
Sbjct: 341 PLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 24/243 (9%)
Query: 123 SFGEAEYGVQGTK----------LVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRV 170
S+G A++G G+ + P+ VE L + + A G + +++ GR+
Sbjct: 66 SWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRL 125
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
T ++ +LG N E + GT + +AAG+ + LA + + +Y+ G
Sbjct: 126 LTCGLNDNGQLGLGNLENASEFEEVKGTES---IADVAAGFWHTLAASKKGK---LYAWG 179
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
G+LGH T K ++ LL P+ VA G++H+ + +DG V TWG+G +G
Sbjct: 180 SNKHGQLGH-HDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHG 238
Query: 290 CLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
LGHG+ E E +PK V+AL ++ +IH A +Y++ VS G V+ +G G LG
Sbjct: 239 RLGHGSTEDEFMPKRVEALVGENISSIH-AGFEYSS-AVSTSGKVFVWGYGHFYVLGQGD 296
Query: 348 IAD 350
D
Sbjct: 297 KKD 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRT 107
AG H++A + KG +Y++GSN GQLGH T + P+ I L+ I Q A G+ +
Sbjct: 161 AGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHS 220
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLS 165
M ++ G+VY +G + G +G + + P+ VE+L +NI + A G +++ +S
Sbjct: 221 MALTKDGEVYTWGFGAHGRLGHGSTEDEFM--PKRVEALVGENISSIHA--GFEYSSAVS 276
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G+V+ + +G+ LG + + + P + + P + A A SGM
Sbjct: 277 TSGKVFVWGYGHFYVLGQGDKKDQLAP-----VVLDFPTSIRQLAFGSFHAAAVSHSGM- 330
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQDGRV 280
+++ G G LGHG ++ P +I + +L+ + VA G+ H VV G V
Sbjct: 331 LFTWGHATHGPLGHGLKS----PNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDV 386
Query: 281 CTW 283
++
Sbjct: 387 FSF 389
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 11/226 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS+A+T G VY++G + G+LGHG+TE+E+ P+ + +L G I AG
Sbjct: 212 QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEY 271
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +S +G+V+ +G F G + +L +P +++ +I Q A G+F A +S
Sbjct: 272 SSAVSTSGKVFVWGYGHFYVLGQGDKKDQL--APVVLDFPTSI--RQLAFGSFHAAAVSH 327
Query: 167 EGRVYTFSWGNDARLGHHTE-PNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G ++T+ LGH + PN + EP L + Q+A G + L +
Sbjct: 328 SGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGD-- 385
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
V+S G G G+LG GS D P+ I +F +L+ VA G +H
Sbjct: 386 -VFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQ--VACGLFH 428
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 136/285 (47%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + A G L+S G+V+ +G+ S G +G+ K VT PQL+ES
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGM--GKDVTGPQLIES 325
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH T+ + P + G LE +
Sbjct: 326 LAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL- 384
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA+ C A S +++ G G G LGHG + +PR +E L L+ +
Sbjct: 385 --QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVE--SLSGLRTIA 440
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WHAA + + G++ TWG G LGHG++E P V AL D
Sbjct: 441 VACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHT 500
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G VY+ G LG N ADG++ L+
Sbjct: 501 FHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNADGKLPCLV 544
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 22/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G++I + G T
Sbjct: 337 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 396
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 397 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 454
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ +RLGH + + ++P + +++ ++A G+ +
Sbjct: 455 IVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHT-FHRVACGHSLTVG 513
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + VY++G + G+LG+ + D K P L+E +L+ +A GA+H AV+
Sbjct: 514 LT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLIKDCVEEIACGAYHVAVLTS 568
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E P +V L + ++A G T +
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAI 618
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 33/275 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG E + PR + SL G+R I A G I
Sbjct: 392 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 451
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + ++L P V +L + + A G+
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL--KPTCVSALIDHTFHRVACGHS 509
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLAL 217
T L+ G+VYT +LG+ PN P L + I V +IA G ++ L
Sbjct: 510 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLIKDCVEEIACGAYHVAVL 566
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 272
S V++ G G G+LGHG D K P L++ + +++ + AA H
Sbjct: 567 T---SRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKW 623
Query: 273 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 300
V G + C+ + R+ C G C S
Sbjct: 624 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 658
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
GSR+D P+ +E +L++ + A G HAA+V + G V TWG G LGHG +
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHI--ACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDV 317
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGH 345
+ P+++++L VA G++ T V+ G++Y++G G + LGH
Sbjct: 318 TGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGH 365
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 33/323 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I QAA G
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G + + G G+LG G HP ++ L L V +AAG WH+ +
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTL--VDIAAGGWHSTALTD 265
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGH-NAIADGQVCSL 356
FG G+ LG+ + GQ L
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLEL 348
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 22/289 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ ++GS GQLG GT EE+ + +L+ + +G+ ++ I D G ++ +G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK P V++L N+ + QAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHQPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 184 HTEP-NDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
EP D P+ + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH---VWT----WGQ 176
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G P ++ + + L +A GA+H + +DGR+ WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+D+ + +A G + + +++ G+VY +G GE LG
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G + ++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++D G+VY +G+ G G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ WG G G LG G E + VV+AL V +G + + +DG ++++G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G +++ G LG+GT W P+ I +L+G ++ + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHT 196
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFCRIACGHSLTVG 313
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG + S+G + G+LG+ R+D K P L+E ++ V VA G++H AV+
Sbjct: 314 LTT--SGQ-ILSMGNTVYGQLGN-PRSDGKLPCLVED--IMGEHVVQVACGSYHVAVLTN 367
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E +P +V+AL D H+A G T +
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAI 417
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + G L++ G+V+ +G++S G +G + + P+LVES
Sbjct: 68 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LG+ T+ + P + G LE
Sbjct: 126 LAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQ 185
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V ++ G + A S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYD 300
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G + S G LG N +DG++ L+
Sbjct: 301 FCRIACGHSLTVGLTTSGQILSMGNTVYGQLG-NPRSDGKLPCLV 344
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 770 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 829
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 830 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 887
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 888 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 945
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 946 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 1003
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 1004 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 1054
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++S++G+VY G + RLG N
Sbjct: 747 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV 805
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 806 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 863
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 864 LVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALA 921
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ + VA G D T ++EDG V+S+G G+ LG
Sbjct: 922 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 958
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 1798 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 1857
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 1858 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 1915
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 1916 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 1971
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 1972 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 2029
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + + V G + +++ G VY++G G+ LGH ++
Sbjct: 2030 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 2079
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 826 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 885
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 886 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 943
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 944 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 999
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 1057
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 1058 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 1089
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 1891 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 1950
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 1951 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 2008
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + VV++ G + +AL SG AVY
Sbjct: 2009 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQFSVALT--KSG-AVY 2064
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 2065 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 2122
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 2123 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 16/314 (5%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 710 AGAGAVSTAHEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 765
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R I A G+ ++S G+VYA G+ + G GV T V P + L V + A
Sbjct: 766 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 823
Query: 156 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 824 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 882
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
A++ Q +Y+ G G G+LGHG + P+L+ L + V VA G+ A
Sbjct: 883 SAAISSQGE---LYTWGLGEYGRLGHGDNATQLKPKLVTA--LAGRRVVQVACGSRDAQT 937
Query: 274 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 938 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 997
Query: 332 VYSFGCGESASLGH 345
V+++G G+ LGH
Sbjct: 998 VWTWGKGDYYRLGH 1011
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 1843 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 1902
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 1903 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 1960
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 1961 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 2018
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L L V V G+ + + + G V TWG G + LGH
Sbjct: 2019 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 2076
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 2077 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 2131
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 2132 TAIQRPRLVAALQ 2144
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 866 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRV 925
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 926 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 983
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 984 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 1042
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ VY+ G G+ G G+ K P L+
Sbjct: 1043 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 1075
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + ++DAG
Sbjct: 989 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAG 1048
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
QVYA+G + G + G T + P LV L +FV + A G+
Sbjct: 1049 QVYAWGDNDHG--QQGSGNTFVNKKPALVIGLDAVFVNRVACGS 1090
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P L+ Q + ++ V V +G H + +G V WG G G LGHGN PK+V+
Sbjct: 1873 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 1932
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
LN + +A G + ++ G V ++G G LGH D Q+ L ++ Y I
Sbjct: 1933 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED-QLRPKLVEALLGYRAI 1991
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q+I+ G H+ V G +Y G+NS GQLG +++P + +L+ + I A G
Sbjct: 40 QSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDD 97
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ +SD GQV +G++ G+ + P++++ L + V+ G+ + L+
Sbjct: 98 HTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 222
R+GR+ FSWG++ +LG T + P L +L +P+V++A G + AL S
Sbjct: 158 RDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 215
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V+ G G+LG G++ ++ +P L+ + ++ + A G H A++ DG V
Sbjct: 216 ---VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHI--ACGQDHTAMLTADGGVFL 270
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESA 341
+G G G LGHG+ E P+ V L V G + T V+ G +Y+FG G
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHG 330
Query: 342 SLGHN 346
LG +
Sbjct: 331 QLGQD 335
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
G H++AV+ +G V +G N GQ G T + E +PRP ++ L + ++ G+ +M
Sbjct: 95 GDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSM 154
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+++++G +++G+ G T P + SL+ + +V+ A G F + L+ G
Sbjct: 155 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 214
Query: 169 RVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V F WG ND +LG + N P LL + + V IA G + L + V
Sbjct: 215 SV--FGWGKNDVGQLGLGNKENKAYP-TLLRNMRSQMVKHIACGQDHTAMLT---ADGGV 268
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 285
+ G G G+LGHGS +E +PR + L+ V G H V+ G GR+ +G
Sbjct: 269 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 326
Query: 286 GRYGCLGHGNEECESVPKVV 305
G +G LG S P+ V
Sbjct: 327 GIHGQLGQDEARSCSNPQRV 346
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
G H++AV+ + V +G N GQ G T + E +PRP +R L + ++ G+ +M
Sbjct: 435 GDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSM 494
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+++++G +++G+ G T P + SL+ + +V+ A G F + L+ G
Sbjct: 495 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 554
Query: 169 RVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V F WG ND +LG + N P LL + + V IA G + L + V
Sbjct: 555 SV--FGWGKNDVGQLGLGNKENKSYP-TLLRNMRSQMVKHIACGQDHTAMLT---ADGGV 608
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 285
+ G G G+LGHGS +E +PR + L+ V G H V+ G GR+ +G
Sbjct: 609 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 666
Query: 286 GRYGCLGHGNEECESVPKVV 305
G +G LG S P+ V
Sbjct: 667 GIHGQLGQDEARSCSNPQRV 686
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 136/310 (43%), Gaps = 19/310 (6%)
Query: 64 VYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
+ +GS+ GQLG G T + + + +L G R+ + G T ++ D G +Y G
Sbjct: 3 TFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCG 62
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+S G+ K P V +L+ + + A G+ T +S G+V WG + R
Sbjct: 63 ANSKGQLGQDRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQV--LGWGRNDR 116
Query: 181 LGHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
D+E P +L L + V++ G + +AL ++S G G+L
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQL 173
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G+ R E L + V VA G +H+ + G V WG G LG GN+E
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE 233
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQV 353
++ P +++ + H+A G T +++ DG V+ FG G LGH N + +V
Sbjct: 234 NKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKV 293
Query: 354 CSLLFLSIFQ 363
L+ I Q
Sbjct: 294 IDLMGSDITQ 303
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L+ + I A G T+ +SD QV +G++ G+ + P+++ L +
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIA 208
V+ G+ + L+R+GR+ FSWG++ +LG T + P L +L +P+V++A
Sbjct: 484 VKVCCGSLHSMALTRDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 541
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + AL S V+ G G+LG G++ ++ +P L+ + ++ +A G
Sbjct: 542 CGGFHSFALTISGS---VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKH--IACGQ 596
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS- 327
H A++ DG V +G G G LGHG+ E P+ V L V G + T V+
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEG 656
Query: 328 EDGDVYSFGCGESASLGHN 346
G +Y+FG G LG +
Sbjct: 657 SKGRLYAFGQGIHGQLGQD 675
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 134/347 (38%), Gaps = 34/347 (9%)
Query: 46 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPI------------RSL 92
+Q G H++ + SKG +Y+FG GQLG P+ + S
Sbjct: 302 TQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSS 361
Query: 93 QGIRIIQAAAGAGRTML-----ISDAGQVYAFGKDS----FGEAEYGVQGTKLVTSPQLV 143
R+++ G +D Q+ +D F +
Sbjct: 362 SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXX 421
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLE 200
L+ + + A G+ T +S RV WG + R D+E P +L L
Sbjct: 422 XXLETVVIKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLA 479
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+ V++ G + +AL ++S G G+LG G+ R E L +
Sbjct: 480 SYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVP 536
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
V VA G +H+ + G V WG G LG GN+E +S P +++ + H+A G
Sbjct: 537 LVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQ 596
Query: 321 YTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVCSLLFLSIFQ 363
T +++ DG V+ FG G LGH N + +V L+ I Q
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQ 643
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P +++L + I+QAA G
Sbjct: 44 VAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ + D G+ YA+G + +G+ + G + + PQ S + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAS--KLVVRQVAAGGT 161
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 218
+ VL+REG V+++ G P D++ + ++ + V+ IA G + LAL
Sbjct: 162 HSVVLTREGHVWSW--------GQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLAL- 212
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
Q G +++ G G+LG G P ++ L L V +AAG WH+ + DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTL--VDIAAGGWHSTALTDDG 268
Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V WG G +G LG G+ + S VP+ V L + V+ G + ++ DG +Y+FG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG 328
Query: 337 CGESASLGH 345
G+ LG+
Sbjct: 329 RGDHGRLGY 337
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ ++ V ++GS GQLG G EE+ +++L+ ++ AG+ ++ I D G+++
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G + G + + TK P V++L N+ +VQAAIG + + +GR Y +
Sbjct: 61 TWGWNQRGTLGHPPE-TKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 178 DARLGHHTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+ G E D PL + + V Q+AAG + + L + V+S
Sbjct: 120 YGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGH---VWS-- 174
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G G P ++ + + L +A GA+H + +DG + WG YG
Sbjct: 175 --WGQPWPPGDIKQISVPVRVQGLERVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQ 228
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G+ + S P VQ L+ + + +A G + + +++DG+VY +G GE LG
Sbjct: 229 LGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 98
QA G H +AV +G Y++G N GQ G ++ RP+R + +
Sbjct: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVR 154
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
Q AAG +++++ G V+++G+ + K ++ P V+ L+ + ++ A+G
Sbjct: 155 QVAAGGTHSVVLTREGHVWSWGQ------PWPPGDIKQISVPVRVQGLERVRLI--AVGA 206
Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
F L +G ++ +WGN+ +LG +P + G L + +V IAAG + A
Sbjct: 207 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPITVQG-LSGLTLVDIAAGGWHSTA 263
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
L VY G G G+LG G D+ + ++ LL + +V V+ G H+ +
Sbjct: 264 LT---DDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALT 319
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+DGR+ T+G G +G LG+G + P V
Sbjct: 320 RDGRMYTFGRGDHGRLGYGRKVTTGQPMEV 349
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG GN E + +V+AL K V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGK 3083
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 3142 SQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 3199
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 3257
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++S++G+VY G + RLG N
Sbjct: 3001 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV 3059
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 3060 PLPHQL-PVLRQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3117
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 3118 LVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA 3175
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ + VA G D T ++EDG V+S+G G+ LG
Sbjct: 3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3212
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4050 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4110 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4167
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4168 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4223
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4224 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4281
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + + V G + +++ G VY++G G+ LGH ++
Sbjct: 4282 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4331
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 145/314 (46%), Gaps = 16/314 (5%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 2964 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 3019
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R I A G+ ++S G+VYA G+ + G GV T V P + L+ V + A
Sbjct: 3020 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLRQYVVKKVA 3077
Query: 156 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 3136
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
A++ Q +Y+ G G G+LGHG T + P+L+ L + V VA G+ A
Sbjct: 3137 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 3191
Query: 274 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 3251
Query: 332 VYSFGCGESASLGH 345
V+++G G+ LGH
Sbjct: 3252 VWTWGKGDYYRLGH 3265
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3139
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3253
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3312 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4143 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 4202
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4203 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4260
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + VV++ G + +AL SG AVY
Sbjct: 4261 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQFSVALT--KSG-AVY 4316
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4317 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 4374
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4375 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4095 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4154
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4155 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4270
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L + V V G+ + + + G V TWG G + LGH
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 4329 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 4383
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4384 TAIQRPRLVAALQ 4396
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3120 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRV 3179
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 3180 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 3237
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3296
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ VY+ G G+ G G+ K P L+
Sbjct: 3297 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 26/278 (9%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 153
+I Q A + +++S G++Y + + + EAE P +E + ++F+
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 619
Query: 154 AA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 620 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 677
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 678 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 734
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 792
Query: 332 VYSFGCGESASLGHNAIADG-QVCSL-LFLSIFQYLQI 367
+Y++ G++ LGH + Q CS+ +S Q+ +I
Sbjct: 793 LYTW--GKATCLGHQLVERSVQGCSVPRLVSSLQHKRI 828
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + +
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3298
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3299 TDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3344
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 786
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 843
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
G V F WG ND++ P V PLL T L ++P + C
Sbjct: 844 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 887
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 791
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
++YT WG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 792 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 842
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 36/328 (10%)
Query: 22 KCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
+ G L RF + ACC + + ++ +G +Y++ +
Sbjct: 561 ESAGVPTLSCRFQIKQVACCETQ----------MLILSQEGKLYTWR----------LAK 600
Query: 82 EEWRPRPIRSL-QGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTS 139
E P P+ + + I A GR L D+ Y++G +G + V
Sbjct: 601 PEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-- 658
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P + +L+ V G ++A ++ G + T+ G ARLGH + P L+ L
Sbjct: 659 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT-LVVAL 717
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ VV +A G +LA G+ V++ G G GKLG+G+ P L+E +
Sbjct: 718 SDHMVVDVALGSGDAHSLALTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ- 775
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIH 315
V AG+ + + +G++ TWG + CLGH E SVP++V +L + +
Sbjct: 776 ---RVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVD 830
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASL 343
VA +S G+V+ +G +S +
Sbjct: 831 VAVSVAHCLALSSSGEVFGWGRNDSQQI 858
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ VT V+ G N SG LG G + P+ + SL G +I + G+G +L ++ G
Sbjct: 76 LYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 135
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+VY +G +++ + G LV Q+ +L N V++ A G+ + VL+ +G VYT+
Sbjct: 136 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 194
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + L+N VV IA G + ++A +G VY G
Sbjct: 195 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 251
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 252 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 309
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 310 NKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 363
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T +G VY++G N+ QLG+GTT P + + L ++I+ A G+ +M
Sbjct: 124 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 182
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 183 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 240
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A G + L L + +
Sbjct: 241 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 295
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G+LG G+++++ +P + + ++ + A +A Q G+V WG
Sbjct: 296 YAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIE-IAACHSAHTSAAKTQSGQVYMWGQC 354
Query: 287 R 287
R
Sbjct: 355 R 355
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 173 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 232
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 233 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 290
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
EG++Y + + +LG + N + +P T++ V++IAA
Sbjct: 291 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVIEIAA 332
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G P+ ++ + + +G H + ++G V TWG
Sbjct: 84 VFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGP-HVVLATEEGEVYTWGH 142
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP +V L + K I VA G + + V++ DG+VY++G S +G
Sbjct: 143 NAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG 202
Query: 345 HNAIAD 350
+ A+
Sbjct: 203 SGSTAN 208
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ V S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3083 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3142
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3143 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3200
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3201 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALHGRRVIQVACGSRDAQTLALTEDG-A 3258
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3259 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3316
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3367
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ V+S++G+VY G + RLG N
Sbjct: 3060 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNV 3118
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+R+ PR
Sbjct: 3119 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRSTLDKPR 3176
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ + A G+ H+A + G + TWG G YG LGHG+ + PK+V AL+
Sbjct: 3177 LVEALRAKKIRDI--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALH 3234
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 3235 GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3271
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R IQ A G ++ G+++A G
Sbjct: 4200 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYG 4259
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ +G VY + G D +
Sbjct: 4260 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4317
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P LL L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4318 LGHGNRMSYDRPK-LLEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4373
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4374 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4431
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4432 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4481
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3139 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAA 3198
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L V+Q A G + T L+ +
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVTALHGRRVIQVACGSRDAQTLALTED 3256
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 3257 GAVFSWGDGDFGKLGRGGSEGSATPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 3312
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3313 TWGKGDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3370
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3371 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3402
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T+ G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4293 SGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAA 4352
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4353 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4410
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4411 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4466
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4467 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDAGEVYTWGDND 4524
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4525 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I A G+ ++S G+VYA G+
Sbjct: 3046 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3105
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3106 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3163
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3164 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3219
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+L+ + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3220 DNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3277
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 3278 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4245 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4304
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+L+E L + V A G+ +A ++ G V T+
Sbjct: 4305 GEVYAWGEGEDGKLGHGNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTW 4362
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4363 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4420
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L L + V G+ + + + G V TWG G + LGH
Sbjct: 4421 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4478
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 4479 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-----DGTV 4533
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4534 TAIQRPRLVAALQ 4546
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ RR S G +S A+T +G +Y++G + G+LGHG ++++ P + +L+ ++
Sbjct: 664 ESLVRRVQS-VYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQV 722
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A G+G T+ ++ G VYA+G +G+ G + L P L+E L + V A
Sbjct: 723 LDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSL--QPLLIECLPRVQRVFA- 779
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
G+ F+ L+ EG++Y SWG + LGH +V+ P L+ +L++ +V +A G
Sbjct: 780 -GSQFSLALTCEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVHVAVGV 835
Query: 212 CYLLALA 218
+ LAL+
Sbjct: 836 AHCLALS 842
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 17/238 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 112
H +AV S YS+G S +LGHG P I SL +R +Q+ G + I+
Sbjct: 628 HFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCSYSAAITL 685
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G +Y +G+ ++G +G + + P +V +LK+ V+ A+ G+ T L+R G V
Sbjct: 686 RGNLYTWGRGTYGRLGHGNSDDQCM--PAMVMALKDHQVLDVALGSGDAHTLCLTRGGLV 743
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 229
Y + G+ +LG+ + + ++ PLL +E +P VQ + AG + LAL C+ +
Sbjct: 744 YAWGDGDYGKLGNGSCNSSLQ--PLL--IECLPRVQRVFAGSQFSLALTCEGQLYSWGKA 799
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
C LG +L + PRLI Q + + V VA G H + +G + +GWGR
Sbjct: 800 SC-LGHQLVERNVQGCSVPRLITSLQ--HKRIVHVAVGVAHCLALSSNGEI--FGWGR 852
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 22/235 (9%)
Query: 140 PQLVESLKNIFVVQAAI-GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
P +ESL + VQ+ G ++A ++ G +YT+ G RLGH + P ++
Sbjct: 660 PTKIESL--VRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMP-AMVMA 716
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L++ V+ +A G L C G VY+ G G GKLG+GS P LIE +
Sbjct: 717 LKDHQVLDVALGSGDAHTL-CLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQ 775
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAI 314
V AG+ + + +G++ + WG+ CLGH N + SVP+++ +L + +
Sbjct: 776 ----RVFAGSQFSLALTCEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIV 829
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWL 369
HVA G +S +G+++ +G + + I VCS L Q +Q+ L
Sbjct: 830 HVAVGVAHCLALSSNGEIFGWGRND-----NQQICPASVCSEPLLR--QPIQVTL 877
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + +
Sbjct: 3298 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3357
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3358 TDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3403
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 43/325 (13%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLQGIRIIQA 100
A P + + + VY+ G + + G T+ +P P ++ Q
Sbjct: 517 ATPNTASTILEQQRVYALGWPALSKEQQGFNVEPALSWTSAATQQPPPALLTCKFQLKQV 576
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAA-- 155
A +L+ G++Y + K T PQL+ E FV AA
Sbjct: 577 ACSEDMVVLLCQEGKLYNWPI------------AKPETEPQLLDFAEIANETFVSIAAHC 624
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--- 212
G F AV S Y++ G+ RLGH D L +E++ V ++ + YC
Sbjct: 625 EGRHFLAVDSNHN-AYSWGVGDSRRLGH----GDCHARELPTKIESL-VRRVQSVYCGCS 678
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
Y A+ + + +Y+ G G G+LGHG+ D+ P ++ + + V + +G H
Sbjct: 679 YSAAITLRGN---LYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTL 735
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ + G V WG G YG LG+G+ P +++ L V+ V G + ++ +G +
Sbjct: 736 CLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQ--RVFAGSQFSLALTCEGQL 793
Query: 333 YSFGCGESASLGHNAIADG-QVCSL 356
YS+ G+++ LGH + Q CS+
Sbjct: 794 YSW--GKASCLGHQLVERNVQGCSV 816
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 96
C + AG S+A+T +G +YS+G S LGH E + PR I SLQ R
Sbjct: 770 CLPRVQRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 827
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I+ A G + +S G+++ +G++ + + + + P L + ++ A
Sbjct: 828 IVHVAVGVAHCLALSSNGEIFGWGRNDNQQ----ICPASVCSEPLLRQPIQVTLPTMPAS 883
Query: 157 GNFFTAVLS 165
G TAV S
Sbjct: 884 GMACTAVQS 892
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 17/305 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + G VY+ GSNS GQLGH P + +L +I + G ++ +
Sbjct: 41 GGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRAHSVAV 98
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ GQV+ +G G+ T V P+L++ L + + Q GN LSR+G++
Sbjct: 99 NEQGQVFVWGAGDGGQLGLETAETA-VRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQL 157
Query: 171 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVY 227
+T+ + +LG E + + P P+ +L IP+ QI AG +C+ L+L SG AV+
Sbjct: 158 FTWGQNSSGQLGLGKGETSKLSPSPV-KSLAGIPLAQITAGGDHCFALSL----SG-AVF 211
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
G G+LG + D P I + L Q VV ++ G H A + + G + T+G G
Sbjct: 212 GWGKNKAGQLGLNDKQDRAVPCHI---KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDG 268
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGH 345
G LGHG+ E +P+ V L + + G + T V G VY+FGC LG
Sbjct: 269 SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGT 328
Query: 346 NAIAD 350
+AD
Sbjct: 329 GILAD 333
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 17/289 (5%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIR 96
+ C SQ + G H IA++ G ++++G NSSGQLG G E + P P++SL GI
Sbjct: 131 KKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIP 190
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ Q AG +S +G V+ +GK+ G + G+ + P ++ L++ VV +
Sbjct: 191 LAQITAGGDHCFALSLSGAVFGWGKNKAG--QLGLNDKQDRAVPCHIKFLRSQRVVYISC 248
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+ TA L++ G ++TF G+ +LGH + N++ P ++ L V QI G + LA
Sbjct: 249 GDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-ELMGTEVSQITCGRHHTLA 307
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQP----VVVAAGAWHA 271
PS VY+ GC G+LG G D + P ++ F LNL+ + + G
Sbjct: 308 FV--PSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKY 365
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
V+ +C G + L + +E+C VP+ + N K++ D
Sbjct: 366 TVI---KIICG---GDHSFLMYSSEQCPEVPEDFRVFNVSKSLSPINHD 408
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 67 FGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
+G+ GQLG G + PR G + + A G T+ + G VY G +S G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ + G SP+LV +L + + G + ++ +G+V+ + G+ +LG T
Sbjct: 64 QLGHDKAGN----SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLET 119
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTD 244
V LL L + + Q+ G + +AL+ +++ G G+LG G T
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALS---RDGQLFTWGQNSSGQLGLGKGETS 176
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
+ P ++ + L + AG H + G V WG + G LG +++ +VP
Sbjct: 177 KLSPSPVKSLAGIPLAQI--TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCH 234
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ L + ++++ GD T +++ G +++FG G LGH
Sbjct: 235 IKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGH 275
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 2679 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 2738
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 2739 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 2796
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 2797 SQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 2854
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 2855 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 2912
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 2963
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++S++G+VY G + RLG N
Sbjct: 2656 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV 2714
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 2715 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 2772
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 2773 LVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA 2830
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ + VA G D T ++EDG V+S+G G+ LG
Sbjct: 2831 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 2867
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 2794
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 2795 ISSQGELYTWGLGEYGRLGHGDNTTQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 2852
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 2853 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 2908
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 2909 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 2966
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 2967 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2998
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 16/314 (5%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 2619 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 2674
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R I A G+ ++S G+VYA G+ + G GV T V P + L V + A
Sbjct: 2675 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 2732
Query: 156 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 2791
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
A++ Q +Y+ G G G+LGHG T + P+L+ L + V VA G+ A
Sbjct: 2792 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 2846
Query: 274 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 2847 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 2906
Query: 332 VYSFGCGESASLGH 345
V+++G G+ LGH
Sbjct: 2907 VWTWGKGDYYRLGH 2920
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 2775 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRV 2834
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 2835 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 2892
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 2893 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 2951
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ VY+ G G+ G G+ K P L+
Sbjct: 2952 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 2984
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 26/278 (9%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 153
+I Q A + +++S G++Y + + + EAE P +E + ++F+
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 273
Query: 154 AA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 274 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 331
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 332 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 388
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 389 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 446
Query: 332 VYSFGCGESASLGHNAIADG-QVCSL-LFLSIFQYLQI 367
+Y++ G++ LGH + Q CS+ +S Q+ +I
Sbjct: 447 LYTW--GKATCLGHQLVERSVQGCSVPRLVSSLQHKRI 482
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + ++DAG
Sbjct: 2898 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAG 2957
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
QVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 2958 QVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 2999
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 383 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 440
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 441 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 497
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
G V F WG ND++ P V PLL T L ++P + C
Sbjct: 498 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 541
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 330 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 389
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 390 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 445
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
++YT WG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 446 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 496
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 36/328 (10%)
Query: 22 KCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
+ G L RF + ACC + + ++ +G +Y++ +
Sbjct: 215 ESAGVPTLSCRFQIKQVACCETQ----------MLILSQEGKLYTWR----------LAK 254
Query: 82 EEWRPRPIRSL-QGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTS 139
E P P+ + + I A GR L D+ Y++G +G + V
Sbjct: 255 PEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-- 312
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P + +L+ V G ++A ++ G + T+ G ARLGH + P L+ L
Sbjct: 313 PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT-LVVAL 371
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ VV +A G +LA G+ V++ G G GKLG+G+ P L+E +
Sbjct: 372 SDHMVVDVALGSGDAHSLALTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQR 430
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIH 315
V AG+ + + +G++ TWG + CLGH E SVP++V +L + +
Sbjct: 431 ----VFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVD 484
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASL 343
VA +S G+V+ +G +S +
Sbjct: 485 VAVSVAHCLALSSSGEVFGWGRNDSQQI 512
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 137/292 (46%), Gaps = 22/292 (7%)
Query: 76 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
G G + P+ + S + + A G L++ G+V+++G++S G +GV
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD- 343
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPH 193
V P+L++SL NI + A G + T ++ G +YT+ G N LGH E + P
Sbjct: 344 -VLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 402
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ G LE I V I+ G + A S +++ G G G LGHG R PR +E
Sbjct: 403 RVNGPLEGIHVSSISCGPWH---TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVE- 458
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESV 301
L L+ V A G WH A V + G++ TWG G G LGHG++E + V
Sbjct: 459 -SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 517
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
P V AL + VA G T ++ G VY+ G LG N ADG++
Sbjct: 518 PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKL 568
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 364 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 423
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ +GQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 481
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+ +
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHSLTV 540
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 541 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPNRVEG-RLSKSFVEEIACGAYHVAVLT 595
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAI 646
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 478
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 536
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + P+ + G L V +IA G ++ L
Sbjct: 537 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLT 595
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 596 ---SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAICLHKWV 652
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 653 SGIDQSMCS 661
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 145/272 (53%), Gaps = 10/272 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKD 122
V+S+G GQLG G T ++ P + +L+G+ II G+ T ++ G +Y +G
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+G+ +G + ++P+ VE+L + +V A G+ TAV++ +G +YT+ + G
Sbjct: 61 MYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118
Query: 183 H-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
H TE + P LL L VVQ++A C AC ++ G G G+LG+G+
Sbjct: 119 HGDTEGHQYTP-KLLERLNGKKVVQLSA--CGF-HTACLTDDHETFAWGEGKFGRLGNGT 174
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ PRLIE L+ P VA G +H+AV+ +DG++ T+G G +G LGH ++ +
Sbjct: 175 ERNCHSPRLIES--LIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLK 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
P +V+AL+ V + G + ++ +G+ +
Sbjct: 233 PTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFS 174
V+++G+ G+ G+ T P V++L+ + + G++ TA ++ G +YT+
Sbjct: 1 VFSWGRGEDGQ--LGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G +LGH E P + L + +V IA G + A S +Y+ G
Sbjct: 59 GGMYGKLGHGNESGHSTPRRVE-ALVGLSIVDIACGSRHT---AVVTSKGCLYTWGDKEN 114
Query: 235 GKLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G GHG ++ P+L+E+ LN + VV ++A +H A + D WG G++G LG
Sbjct: 115 GVAGHGDTEGHQYTPKLLER---LNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLG 171
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G E P+++++L VA G + + V++ DG +Y+FG GE LGH
Sbjct: 172 NGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH 224
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ G H+ AV S G +Y++G G+LGHG PR + +L G+ I+ A G+
Sbjct: 36 THVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSR 95
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G +Y +G G A +G +G + +P+L+E L VVQ + F TA L
Sbjct: 96 HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQY--TPKLLERLNGKKVVQLSACGFHTACL 153
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ + + + G RLG+ TE N P + + P Q+A G + A+ + M
Sbjct: 154 TDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYP-CQVACG-GFHSAVITRDGKM 211
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
Y+ G G G+LGH + ++ P L+E
Sbjct: 212 --YTFGGGEHGQLGHADKVNKLKPTLVEALD 240
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS +T G +Y+FG GQLGH + +P + +L G+ + Q G
Sbjct: 194 QVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSH 253
Query: 107 TMLISDAGQVY 117
++ ++ G+ +
Sbjct: 254 SVALTSEGEYH 264
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 31/309 (10%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VY++G + GQLG ++ P+ + L II+ A +M +S G+VY +GK+
Sbjct: 44 TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKN 103
Query: 123 SFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
G Y + ++ P+LVE L+NI + Q + G F A +S++G +YT WGN
Sbjct: 104 KGGILGHYDITSFNMI-QPELVEKLENIQIKQISCGPFHMAAISQDGELYT--WGNKDHG 160
Query: 180 RLGHHTE--PNDVEPH-----------PLLGT----LENIPVVQIAAGYCYLLALACQPS 222
+LGH + N VE +L T L I Q++ G + + L
Sbjct: 161 KLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT---E 217
Query: 223 GMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
VYS G + G+LG+ S T P+ I Q + + + G +A V G+V
Sbjct: 218 NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNI----INIDCGQQFSAAVSSSGKVY 273
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
TWG +G LG+ ++ P V K I+++ GD +S +G ++++G G
Sbjct: 274 TWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333
Query: 342 SLGHNAIAD 350
LGH+ D
Sbjct: 334 QLGHSNRND 342
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 41/332 (12%)
Query: 25 GSWKLVLRFLLAGEACCRREN---SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
G + + ++ E + EN Q GP H A++ G +Y++G+ G+LGH +
Sbjct: 109 GHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQ 168
Query: 82 EEWR------------------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+ + P ++SL GI+ Q + G T+++++ G+VY+FG
Sbjct: 169 KSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSM 228
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 181
G+ Y + T P+ + L+NI + G F+A +S G+VYT WGN+ +L
Sbjct: 229 KGQLGYQSEETGNF-QPKKIPDLQNIINIDC--GQQFSAAVSSSGKVYT--WGNNDHGQL 283
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G++ P+ + G N ++ I+ G ++ AL+ + +++ G G G+LGH +
Sbjct: 284 GNNQSIYQARPNQVTGFGGN-KIINISCGDNFIAALSNEGK---LFTWGYGNDGQLGHSN 339
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECE- 299
R D P+ IE + + V G H A + Q+ ++ +G G G LG G N E E
Sbjct: 340 RNDLYAPKQIE----FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEA 395
Query: 300 ---SVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+ PK+V+ +K + V G T ++E
Sbjct: 396 AIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 39/331 (11%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGI 95
E R + A S+A++ G VY++G N G LGH T+ +P + L+ I
Sbjct: 71 EKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENI 130
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-------------------GTKL 136
+I Q + G IS G++Y +G G+ + +Q G+ L
Sbjct: 131 QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSML 190
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
P V+SL I Q + G FT VL+ G VY+F +LG+ +E +
Sbjct: 191 ---PTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKI 247
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-- 254
L+NI + I G + A++ S VY+ G G+LG+ + P + F
Sbjct: 248 PDLQNI--INIDCGQQFSAAVS---SSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGG 302
Query: 255 -QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+++N ++ G A + +G++ TWG+G G LGH N PK ++ K
Sbjct: 303 NKIIN-----ISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEF--KEKI 355
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
I V G T ++++ +Y FG G LG
Sbjct: 356 IKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
VY + +GN +LG E N P + L + ++++ A +AL+ VY+
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVE-KLSDRNIIKVKANKSVSMALS---QDGKVYTW 100
Query: 230 GCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G GG LGH T + P L+E+ L N+Q ++ G +H A + QDG + TWG
Sbjct: 101 GKNKGGILGHYDITSFNMIQPELVEK--LENIQIKQISCGPFHMAAISQDGELYTWGNKD 158
Query: 288 YGCLGH-------------GNE-----ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
+G LGH GN+ E +P VQ+LN +K V+ G T V++E+
Sbjct: 159 HGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN 218
Query: 330 GDVYSFGCGESASLGHNAIADG 351
G+VYSFG LG+ + G
Sbjct: 219 GEVYSFGNSMKGQLGYQSEETG 240
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+ +G+ P VY+ G G G+LG + ++ P+ +E+ N+ + V A
Sbjct: 26 VTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNI--IKVKA 83
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTF 324
+ + QDG+V TWG + G LGH + ++ P++V+ L +++ ++ G +
Sbjct: 84 NKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMA 143
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+S+DG++Y++G + LGH
Sbjct: 144 AISQDGELYTWGNKDHGKLGH 164
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ VT V+ G N SG LG G + P+ + SL G +I + G+G +L ++ G
Sbjct: 75 LYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 134
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+VY +G +++ + G LV Q+ +L N V++ A G+ + VL+ +G VYT+
Sbjct: 135 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 193
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + L+N VV IA G + ++A +G VY G
Sbjct: 194 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 250
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 251 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 308
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 309 NKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 362
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T +G VY++G N+ QLG+GTT P + + L ++I+ A G+ +M
Sbjct: 123 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 181
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 182 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 239
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A G + L L + +
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 294
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G+LG G+++++ +P + + + A +A Q G+V WG
Sbjct: 295 YAWGANSYGQLGTGNKSNQSYPTTV-TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQC 353
Query: 287 R 287
R
Sbjct: 354 R 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 172 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 231
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 232 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 289
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
EG++Y + + +LG + N + +P T++ VV+IAA
Sbjct: 290 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVVEIAA 331
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G P+ ++ + + +G H + ++G V TWG
Sbjct: 83 VFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGP-HVVLATEEGEVYTWGH 141
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP +V L + K I VA G + + V++ DG+VY++G S +G
Sbjct: 142 NAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG 201
Query: 345 HNAIAD 350
+ A+
Sbjct: 202 SGSTAN 207
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ + ++GIR+ + GA T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHT 409
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 163
+++ AGQ++ FG SFG +G T P+ VE+L+ + + A G + TA
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467
Query: 164 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
LS G ++YT+ G+ RLGH + P + +E + Q+A G
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE-RICQVACGND 526
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+AL + VY++G G+LG + + K P +E ++ N VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V+ V TWG G G LGHG+ + P +V L D + +VA G T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 25/285 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G +L++ G+++++G++S G +GV+ V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G + T ++ G +YT+ G N LGH +E + P + G +E I
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR 398
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG PR +E L L+
Sbjct: 399 VSYISCGAWHTAVVT---SAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTK 453
Query: 264 VAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
VA G WH A + ++ TWG G G LGHG+ E VP+ V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ + VA G+ T ++ G VY+ G LG +A A+G++
Sbjct: 514 MEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGKL 557
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 145/319 (45%), Gaps = 38/319 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT +G ++S+G S G+LGHG + P+ I +L G + A G T +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQAAIGNFFTAVLSR 166
+ +G +Y +G G YG+ G S PQ V ++ I V + G + TAV++
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTS 414
Query: 167 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 216
G+++TF G+ LGH P +VE TL + ++A G + A
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468
Query: 217 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAG 267
+ PS +Y+ G G G+LGHG + PRL+ + L+ + VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALMEERICQVACG 524
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 326
+ GRV T G YG LG + +P V+ + + VA G Y V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583
Query: 327 SEDGDVYSFGCGESASLGH 345
+ +VY++G G + LGH
Sbjct: 584 TSKNEVYTWGKGLNGQLGH 602
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
+G + S+ D P+ +E +L++ + A G HA +V + G + +WG G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
HG E S PK++ L+ VA G+Y T V+ GD+Y++G G
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDG 369
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G ++A+T+ G VY+ GS + GQLG T + + + + A G+
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ +VY +GK G+ +G + +P +V+ LK+ V A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + + G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3133 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3192
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L++ + A G+ +A +S
Sbjct: 3193 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 3250
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3251 SQGELYTWGLGEYGRLGHGDNSTQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-A 3308
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3366
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3417
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++ + G+VY G + RLG N
Sbjct: 3110 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNV 3168
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 3169 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3226
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 3227 LVETLRSKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALA 3284
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 3285 GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3321
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4237 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4296
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4297 SGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4354
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4355 LGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4410
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4411 DSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDG 4468
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4469 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4518
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3189 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAA 3248
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L V+Q A G + T L+ +
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGDNSTQL--KPKLVAALAGRRVIQVACGSRDAQTLALTED 3306
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 3307 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 3362
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3363 TWGKGDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3420
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3421 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3452
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4330 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAA 4389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L PQLVE+L + A G + T ++ +
Sbjct: 4390 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPQLVEALLGYRAIDIACGSGDAQTLCINDD 4447
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4448 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4503
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4504 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 4561
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4562 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I A G+ ++ G+VYA G+
Sbjct: 3096 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 3155
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3156 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3213
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ TL + + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3214 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3269
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ + P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3270 DNSTQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3327
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 3328 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3374
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 146/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G + P + SLQ + + + A +G + ++
Sbjct: 4282 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4341
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4342 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 4399
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4400 GKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CINDDDNVWSWGDGD 4457
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L + + V G+ + + + G V TWG G + LGH
Sbjct: 4458 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4515
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 4516 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 4570
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4571 TAIQRPRLVAALQ 4583
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 143/319 (44%), Gaps = 41/319 (12%)
Query: 64 VYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQV 116
VY+ G S + HG E W P SL ++ Q +++S+ G++
Sbjct: 539 VYALGWPSLSKEQHGFNAEPALSWSSDP-SSLPLLNCKFQVQQIVCSESIVLILSEDGKL 597
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAV-LSREGRVYT 172
Y + + K T PQL+E + + +V A G F A+ ++R
Sbjct: 598 YNW------------RMFKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNA---- 641
Query: 173 FSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+SWGN D RLGH P + TL + V + G Y A+ C SG +Y+ G
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKI--TLLDRCVKAVFCGCSYSAAITC--SG-NLYTWG 696
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G +LGHG+ D+ P ++ + V + +G H+ + +G V WG YG
Sbjct: 697 RGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGK 756
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA- 349
LG+GN P +V++L V+ V G + ++ DG +YS+ G+++ LGH +
Sbjct: 757 LGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSW--GKASCLGHQLVER 812
Query: 350 DGQVCSL-LFLSIFQYLQI 367
Q CS+ +S Q+ +I
Sbjct: 813 SAQWCSVPRLISGLQHKRI 831
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + +
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3407
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3408 TDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3453
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 215
G ++A ++ G +YT+ G ARLGH +D +P P ++ L ++ +A G
Sbjct: 679 GCSYSAAITCSGNLYTWGRGTYARLGHGN--SDDQPLPTVVMALTEHEIIDVALGSGDAH 736
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+L C S VY+ G GKLG+G+ P L+E + V AGA + +
Sbjct: 737 SL-CLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ----RVFAGAQFSMALT 791
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
DG++ + WG+ CLGH E SVP+++ L + + VA G +S G+
Sbjct: 792 TDGQL--YSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGE 849
Query: 332 VYSFGCGESASLGHNAIA 349
V+ +G +S + ++++
Sbjct: 850 VFGWGRNDSQQICPSSVS 867
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+ +TS+G VY++G G+LG+G P + SL ++ + AGA +M
Sbjct: 732 SGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMA 789
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ+Y++GK S + + + + P+L+ L++ +V A+G LS G
Sbjct: 790 LTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGE 849
Query: 170 VYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V F WG ND++ P+ V PLL +P++ +A +AC S +++
Sbjct: 850 V--FGWGRNDSQ---QICPSSVSSEPLL----RVPIL-VALPTLPASGVACTASQSLIWT 899
Query: 229 VGCGLGGKLGHGSRTDEKHP--RLIEQF 254
G L D P RL++Q
Sbjct: 900 QSSRQGVPLRCPFVIDPGEPTFRLLDQL 927
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--EW--RPRPIRSLQGIRIIQAAA 102
+ AG S+A+T+ G +YS+G S LGH E +W PR I LQ RI+ A
Sbjct: 779 RVFAGAQFSMALTTDGQLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHKRIVDVAV 836
Query: 103 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
G + +S G+V+ +G+ DS V L+ P LV
Sbjct: 837 GVAHCLALSSCGEVFGWGRNDSQQICPSSVSSEPLLRVPILV 878
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
GV++ +G N GQLG + +L +R +Q G ++ G+VYA G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+E+L+++ V Q A+ G L+ G V+++ G+D
Sbjct: 3679 GA--GGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDG 3736
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH ++ P L+ +L + VV +A G + AC + +Y+ G G G+LGH
Sbjct: 3737 KLGHGSKALCERPK-LIESLRDKHVVSVACGGAHS---ACITASGELYTWGKGRYGRLGH 3792
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+ +E+ N+ V +G V +DG V +WG G YG LG G +
Sbjct: 3793 GDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGC 3852
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P+ + +L + I V G + ++ G VY++G G+ LGH
Sbjct: 3853 KFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGH 3898
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 152/301 (50%), Gaps = 11/301 (3%)
Query: 49 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 105
IAG S+ + S G V++ G ++G+LG G + +P+P+ L I+ + +G
Sbjct: 2690 IAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGR 2749
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + + P+LVESLK + A G+ +A ++
Sbjct: 2750 HALALTIDGRVFSWGEGEDGKLGHGNKIS--YDRPKLVESLKCKRIRDVACGSSHSAAVT 2807
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P + L + VVQ+A G LA
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHW- 2865
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
VYS G G GKLG G P+ +E LN Q V+ V GA + + ++G+V TWG
Sbjct: 2866 VYSWGDGDFGKLGKGGSDGSSLPQNVET---LNSQQVIQVECGAQFSLALSKNGKVWTWG 2922
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG++ P+VV+ L D I V+ G V++ G+VY++G + G
Sbjct: 2923 KGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQG 2982
Query: 345 H 345
+
Sbjct: 2983 N 2983
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 152/308 (49%), Gaps = 12/308 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G A+TS G VY+ G + G+LG G TE P I +LQ + + Q A +G
Sbjct: 3656 QIVGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGG 3715
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ +G V+++G+ G+ +G + L P+L+ESL++ VV A G +A +
Sbjct: 3716 KHCLALTSSGDVFSWGEGDDGKLGHGSKA--LCERPKLIESLRDKHVVSVACGGAHSACI 3773
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + ++P + L V+ +A G L G+
Sbjct: 3774 TASGELYTWGKGRYGRLGHGDSEDQLKPKK-VEELAGHNVLDVACGSGDAQTLCVSRDGL 3832
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P+ I+ Q N + V G+ + + G V TWG
Sbjct: 3833 -VWSWGDGDYGKLGRGGSDGCKFPQKIDSLQ--NAGVIKVECGSQFSVALTAAGVVYTWG 3889
Query: 285 WGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G Y LGHG+E+ P+ VQ AL + I VA G ++ G+V+++G + L
Sbjct: 3890 KGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQL 3949
Query: 344 GH---NAI 348
G NAI
Sbjct: 3950 GDGSTNAI 3957
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 9/276 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+TS G V+S+G G+LGHG+ RP+ I SL+ ++ A G +
Sbjct: 3713 SGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSAC 3772
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSRE 167
I+ +G++Y +GK +G +G +L P+ VE L N+ V G+ T +SR+
Sbjct: 3773 ITASGELYTWGKGRYGRLGHGDSEDQL--KPKKVEELAGHNVLDVACGSGDAQTLCVSRD 3830
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG P + +L+N V+++ G + +AL + VY
Sbjct: 3831 GLVWSWGDGDYGKLGRGGSDGCKFPQKI-DSLQNAGVIKVECGSQFSVALT---AAGVVY 3886
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q L + + VA G+ H G V TWG
Sbjct: 3887 TWGKGDYHRLGHGSEDHVRRPQAV-QGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDND 3945
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G LG G+ PK+V +L K VA G T
Sbjct: 3946 EGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHT 3981
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 20/272 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG RP+ + SL+ RI A G+ +
Sbjct: 2746 SGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAA 2805
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ +G++Y +G +G +G +L P+ V +L + VVQ A G+ L+ R
Sbjct: 2806 VTSSGELYTWGSGEYGRLGHGDNVPQL--KPKQVRALSHERVVQVACGSRDAQTLALTER 2863
Query: 170 VYTFSWGND--ARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ +SWG+ +LG + P +VE TL + V+Q+ G + LAL+
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVE------TLNSQQVIQVECGAQFSLALS---K 2914
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V++ G G +LGHGS + + P+++E+ N+ + V+ GA H V G V
Sbjct: 2915 NGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNV--IQVSVGALHCIAVTDRGEVYA 2972
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
WG +G G+GN P +V+ L + +
Sbjct: 2973 WGDNDHGQQGNGNTTVNRKPAIVRGLEAITNV 3004
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 17/319 (5%)
Query: 32 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 91
RFL A E C+ + P + K V+ +G N QLG + P+
Sbjct: 2625 RFL-AQETECKLGIVNQMGSPSMRENIECK--VFVWGLNDKDQLGGLKGSKIKEPKFSEV 2681
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
+ ++ + A G+ ++S G+V+A G+ + G G+ + V P+ + L F+
Sbjct: 2682 ISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGR--LGLGHSHNVAQPKPLTDLSPYFI 2739
Query: 152 VQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ A+ G L+ +GRV+++ G D +LGH + + P L+ +L+ + +A
Sbjct: 2740 KKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPK-LVESLKCKRIRDVAC 2798
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA 268
G + A+ S +Y+ G G G+LGHG + P+ Q + L+ + VV VA G+
Sbjct: 2799 GSSHSAAVT---SSGELYTWGSGEYGRLGHGDNVPQLKPK---QVRALSHERVVQVACGS 2852
Query: 269 WHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
A + R V +WG G +G LG G + S+P+ V+ LN + I V G + +
Sbjct: 2853 RDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912
Query: 327 SEDGDVYSFGCGESASLGH 345
S++G V+++G G+ LGH
Sbjct: 2913 SKNGKVWTWGKGDYFRLGH 2931
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 164 LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
++R +T SWG + GH+ E V+ + L + VQI G
Sbjct: 3604 VNRSPDEWTLSWGGSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQT 3663
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L AL S VY+ G G GG+LG G P LIE Q + + V V +G H
Sbjct: 3664 LFALT---SDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLA 3720
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G V +WG G G LGHG++ PK++++L D + VA G + ++ G++Y
Sbjct: 3721 LTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELY 3780
Query: 334 SFGCGESASLGHNAIAD 350
++G G LGH D
Sbjct: 3781 TWGKGRYGRLGHGDSED 3797
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 45 NSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
NSQ + G S+A++ G V+++G +LGHG+ P+ + L +IQ
Sbjct: 2895 NSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQV 2954
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
+ GA + ++D G+VYA+G + G+ G T + P +V L+ I
Sbjct: 2955 SVGALHCIAVTDRGEVYAWGDNDHGQQGNG--NTTVNRKPAIVRGLEAI 3001
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +A T G V+++G N GQLG G+T RP+ + SL+G ++ + A G+
Sbjct: 3921 QVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAH 3980
Query: 107 TM 108
T+
Sbjct: 3981 TV 3982
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 17/304 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +TS G VY+ GSN QLGH + RP I L ++Q A G+
Sbjct: 44 QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTK--RPLLIPELLDYVVVQIACGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M +S+ GQV ++G + G+ +V P++V L + VVQ A GN + L+
Sbjct: 102 SMALSEWGQVLSWGDNDCGQLGQATD-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDV--EPHPL-LGTLENIPVVQIAAGYCYLLALACQP 221
G +Y SWG++ +LG +T P +V P+ L TL IPV IA G + ++
Sbjct: 161 CGELY--SWGSNIYGQLGVNT-PKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS--- 214
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
AV+ G G+LG T +P ++ + L ++ VA G + + +G V
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGVF 272
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHG E +P++V L VA G+ +T +V G VY FG G S
Sbjct: 273 TCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332
Query: 341 ASLG 344
LG
Sbjct: 333 GQLG 336
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+T+ +Y +G+ S GQLG G E+E P + I Q A G T+ ++ +G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VYA G + + + + + P L+ L + VVQ A G+ + LS G+V SW
Sbjct: 61 VYACGSNDHSQLGHDLPTKR----PLLIPELLDYVVVQIACGSRHSMALSEWGQV--LSW 114
Query: 176 GND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G++ +LG T+ + V+ ++ L + VVQIA G + LAL S +YS G +
Sbjct: 115 GDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNI 171
Query: 234 GGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC-- 290
G+LG + + H + + LL + +A G H+ ++ + V +GWGR C
Sbjct: 172 YGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV--FGWGRNNCGQ 229
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
LG +E S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 230 LGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V S+G N GQLG T ++ + P+ +R L ++Q A G
Sbjct: 94 QIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNN 153
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G+ GV K VT P + +L I V A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQ--LGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++S+ V+ + N +LG + E + P L TL + V +A G + + L +
Sbjct: 212 IISKSSAVFGWGRNNCGQLGLNDETSRSYPTQL-KTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFGANEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 282 TWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + ++P+VV
Sbjct: 326 GFGLGSSGQLGTRSTKSLTLPQVV 349
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + P ++G
Sbjct: 320 SRGRVYGFGLGSSGQLGTRSTKSLTLPQVVIG 351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+ Q+A G+ + L L S VY+ G +LGH T K P LI + LL+ V
Sbjct: 42 IKQVACGHRHTLFLT---SSGRVYACGSNDHSQLGHDLPT--KRPLLIPE--LLDYVVVQ 94
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
+A G+ H+ + + G+V +WG G LG +++ +PK+V+ L + +A G+
Sbjct: 95 IACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNH 154
Query: 323 TFVVSEDGDVYSFGCGESASLGHNA 347
+ ++ G++YS+G LG N
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNT 179
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++G LG+GT W P+ I L+G+++ A G T
Sbjct: 336 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 395
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LIS GQ++ FG +FG +G + K ++ P+ V+SL + + A G + TA +
Sbjct: 396 ALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEV 453
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 454 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 512
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V++VG + G+LG+ D K P L+E +LL VA GA+H V+
Sbjct: 513 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 567
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V++L D +A G
Sbjct: 568 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 610
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 21/280 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + A G + +++ G+V+ +G+++ G G+ K VT P+LVE+
Sbjct: 267 PKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEA 324
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ +G +YT+ G N LG+ T+ + P + G LE +
Sbjct: 325 LAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQ 384
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + ++ S +++ G G G LGHG + +PR ++ L L+ +
Sbjct: 385 VAYVACGPWHTALIS---STGQLFTFGDGTFGVLGHGDKKSISYPREVDS--LTGLRTIA 439
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 440 VACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 499
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+A G T ++ G V++ G LG N ADG+
Sbjct: 500 FHKIACGHSITIGLTTSGQVFTVGSSVYGQLG-NPHADGK 538
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 25/252 (9%)
Query: 114 GQVYAFGK---DSF----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
G ++ +G+ D+F + V V P+ +ES + A G +A+++R
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+T+ RLG + +P L+ L V +A G + A+ +
Sbjct: 294 QGEVFTWGEETGGRLGLGMGKDVTQPR-LVEALAATTVDLVACGEFHTCAVTMD---GEL 349
Query: 227 YSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+ G LG+G+ P+ I L LQ VA G WH A++ G++ T+G
Sbjct: 350 YTWGDGVHNAGLLGNGTDVSHWMPKRISGI-LEGLQVAYVACGPWHTALISSTGQLFTFG 408
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVY 333
G +G LGHG+++ S P+ V +L ++ I VA G + T V E G ++
Sbjct: 409 DGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLF 468
Query: 334 SFGCGESASLGH 345
++G G+ LGH
Sbjct: 469 TWGDGDKNRLGH 480
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ ++S G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 391 GPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAV 450
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 451 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 508
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G+V+T +LG + + +P + L ++A G +++ L
Sbjct: 509 ITIGLTTSGQVFTVGSSVYGQLG-NPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT- 566
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ ++A G+ ++A +
Sbjct: 567 --SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 617
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E+++ +A G H + +TSK VY++G ++G+LGHG E+ P + SL+ + A
Sbjct: 550 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609
Query: 103 GAGRTMLI 110
G+ + I
Sbjct: 610 GSNYSAAI 617
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 22/333 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--GIRIIQAAAGAGRTM 108
G H++A+T+ G VYS+G S GQLGHG + P+ I + G+++ + G +
Sbjct: 61 GSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSA 120
Query: 109 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G +Y +G+ +G+ E+ L+E + + VV+ + G TA L
Sbjct: 121 AVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAAL 180
Query: 165 SREGRVYTFSWGNDARLG------HHTEPNDV----EPHPLLGTLENIPVVQIAAGYCYL 214
+ GRVY + G+ +LG T+ N + PH L+ VVQ+A G +
Sbjct: 181 TNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPH-LVEGFNGEKVVQVACGAFHS 239
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
A+ Q VY G G LG G +D++ P+ +E F ++ + V+ G WH VV
Sbjct: 240 AAVTEQGH---VYIWGKEDYGMLGVGQTSDQQTPKRVEFFD--DIPALRVSCGGWHTMVV 294
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G +G G YG LG G+ + + P +V+AL I A G T V+ DG Y
Sbjct: 295 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYV 354
Query: 335 FGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
G + LG + V + L L Q+
Sbjct: 355 AGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQV 387
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 147/315 (46%), Gaps = 48/315 (15%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTMLISDA 113
V +FG N GQLG G P+ + L G I+ + G+ TM ++ +
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-----ESLKNIFVVQAAIGNFFTAVLSREG 168
G VY++G S G+ +G K + PQ + E LK +V + G +A ++ +G
Sbjct: 72 GAVYSWGWGSMGQLGHG--DLKSINVPQKIAFFEQEGLKVDYV---SCGGCHSAAVTNDG 126
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPH--------PLLGTLENIPVVQIAAGYCYLLALACQ 220
+Y WG + G P + E PLL + + VV+++ G + AL
Sbjct: 127 TLYM--WG-ETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNL 183
Query: 221 PSGMAVYSVGCGLGGKLGHGS----RTDEK------HPRLIEQFQLLNLQPVV-VAAGAW 269
VY G G G+LG GS TD+ P L+E F N + VV VA GA+
Sbjct: 184 GR---VYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGF---NGEKVVQVACGAF 237
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H+A V + G V WG YG LG G + PK V+ +D+ A+ V+ G + T VV++
Sbjct: 238 HSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKS 297
Query: 330 GDVYSFGCGESASLG 344
GD Y+FG GE LG
Sbjct: 298 GDCYAFGRGEYGRLG 312
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS AVT +G VY +G G LG G T ++ P+ + I ++ + G
Sbjct: 231 QVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWH 290
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
TM+++ +G YAFG+ +G G+ TK T P LV++LK V+QAA G T ++
Sbjct: 291 TMVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTS 348
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLAL 217
+G Y + RLG D++P P L IPV Q++AG + +AL
Sbjct: 349 DGIAYVAGRPDHGRLGM----TDMKPLSVPTRLDLGPIPVRQVSAGGAHSMAL 397
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 225 AVYSVGCGLGGKLGHGSR-------TDEKHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQ 276
AV + GC G+LG G++ D +Q LL + V V+ G+ H +
Sbjct: 11 AVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA 70
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYS 334
G V +WGWG G LGHG+ + +VP+ + +K +V+ G + V+ DG +Y
Sbjct: 71 SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130
Query: 335 FG 336
+G
Sbjct: 131 WG 132
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 25/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + V+ P+ VESL + + A G + TA +
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAIIEV 456
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + +EP + +E+ +IA G+ +
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIED-NFHRIACGHSLTVG 515
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ ++D K P L+E +F +++ + A GA+H AV+
Sbjct: 516 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVEDKFAGESVEEI--ACGAYHVAVLT 569
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E P +V+AL D ++A G +Y++ +
Sbjct: 570 SKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAI 620
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 18/219 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+ +ES + V+Q A G A+++R+G ++T+ + RLGH N V+P L+ +
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR-LVEAM 328
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLL 257
+ V +A G + A+ +Y+ G G G LGHG+ P+ I L
Sbjct: 329 ASTTVDFVACGEFHTCAVTM---AGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-PLE 384
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
LQ +V G WH A++ G++ T+G G +G LGHG+ E S P+ V++L+ ++ I VA
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444
Query: 318 TGDYTTFVVSE-----------DGDVYSFGCGESASLGH 345
G + T + E G ++++G G+ LGH
Sbjct: 445 CGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGH 483
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + SG LGHG W P+ + LQG+ I + G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AG+++ FG +FG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+ G+++T+ G+ RLGH + + P + L Q+A G+ +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAALVEPNFCQVACGHSLTV 544
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + +Y++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + +LV P V +L Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G +YT +LG + + + P + G L V ++A G ++ L
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHGS D P L+E + ++ + AA H V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 657 SGVDQSMCS 665
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
P+ +ES+ + V A GN A+++++G V FSWG + RLGH + + P L+
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L N+ + +A G + A+ + + G G LGHG P+ + L
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
L ++ G WH A+V G++ T+G G +G LGHG+ + S+P+ V++L ++ + A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473
Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
G + T V E G ++++G G+ LGH
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH 513
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGH 345
PK++ AL+++ VA G+Y T V+ GD+Y++G G S LGH
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH 396
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 17/304 (5%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E QA +G HS+ + S G ++S G NS GQLG + + P+ IR+L +R+ + G
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCG 83
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ +
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGVG-EFKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142
Query: 164 LSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G+V FSWG+++ +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 143 LSEGGQV--FSWGSNSHGQLGLGKECPSQASPQ-RVRSLDGIPLTQVAAGGAHSFALSL- 198
Query: 221 PSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG A + G G+L + PR I L NL + ++ G H AV+ Q
Sbjct: 199 -SG-ASFGWGSNNAGQLALRQNNVPVQSHKPRSIG--ALKNLGVIYISCGYEHTAVLTQT 254
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 336
G+V T+G YG LGH + P++V+ ++ + + + G Y T V G V SFG
Sbjct: 255 GKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFG 313
Query: 337 CGES 340
G S
Sbjct: 314 RGPS 317
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 15/265 (5%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G + QAA+G ++L+ G++++ G +S G+ G +G + P+ + +L N+ V
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRIRTLDNLRVDL 79
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+ G + + +GRV+ + G++ +LG E N + + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTK--IKTLTGIKIIQVSCGH 137
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ LAL+ G V+S G G+LG G + P+ + + L VAAG H
Sbjct: 138 YHSLALS---EGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPL--TQVAAGGAH 192
Query: 271 AAVVGQDGRVCTWGWGRYG--CLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVS 327
+ + G WG G L N +S P+ + AL ++ I+++ G T V++
Sbjct: 193 SFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLT 252
Query: 328 EDGDVYSFGCGESASLGHNAIADGQ 352
+ G V++FG LGH+ A+ +
Sbjct: 253 QTGKVFTFGGNSYGQLGHSPTAEKE 277
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS+A+T + V+++G GQLGHG + W P ++ LQG I G
Sbjct: 95 QIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYEN 154
Query: 107 TMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T I+ G+V F GK G+ + G+ G V P ++SL ++QA G F+
Sbjct: 155 TFAITGTGKVLGFGSAASGKLGNGDVDGGIGGN--VYLPVQLKSLAKFTIIQATGGKNFS 212
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLA 216
LS G++Y+ + + +LG E + P GT++ + V ++ G + LA
Sbjct: 213 MFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLA 272
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
L+ G+ VYS G G+ LGHG D P+++ +L P V V+AG +H+A V
Sbjct: 273 LS--EDGI-VYSWGSGINWALGHGGTEDTFTPKMVA---MLEADPCVSVSAGGYHSAAVS 326
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
GR+ TWG G LG G + VQ L
Sbjct: 327 ATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRL 359
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 14/295 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ ++ G VYS+G N S Q GHG + +W PR IR+L+ ++++Q AAG ++
Sbjct: 46 GGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVA 105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++D +V+ +G+ G+ +G V P LV+ L+ + G T ++ G+
Sbjct: 106 LTDRSEVFTWGRGLHGQLGHG--DVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK 163
Query: 170 VYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V F +LG+ + + P+ L +L ++Q G + + L+
Sbjct: 164 VLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQ--- 220
Query: 226 VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+YSVG G+LG E + +++ + V+ G H+ + +DG V
Sbjct: 221 LYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVY 280
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+WG G LGHG E PK+V L + V+ G Y + VS G +Y++G
Sbjct: 281 SWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWG 335
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 19/299 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPR---PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
VYS G + G+LG +E R P+ +LQ + + A G +L+S AG+VY++G
Sbjct: 6 VYSCGHGAGGRLG--LNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG 63
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+ + +GV+ P+ + +L+ + VVQ A G + L+ V+T+ G +
Sbjct: 64 YNDSRQTGHGVEDLS-DWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQ 122
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + +DV L+ L+ + I GY A+ V G GKLG+G
Sbjct: 123 LGH-GDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK---VLGFGSAASGKLGNG 178
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
+ QL +L + G + + G++ + G+ G LG EE
Sbjct: 179 DVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEE 238
Query: 298 CESV----PKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
ES+ +Q ++ V +V+ GD + +SEDG VYS+G G + +LGH D
Sbjct: 239 VESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTED 297
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
VY+ G RLG + E LGTL+++ V +A G + L L+ VYS
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLS---RAGKVYSW 62
Query: 230 GCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G + GHG + PR I + + + V +AAG H+ + V TWG G +
Sbjct: 63 GYNDSRQTGHGVEDLSDWEPRWIRALETVKV--VQIAAGEDHSVALTDRSEVFTWGRGLH 120
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG+ P +V+ L + G TF ++ G V FG S LG N
Sbjct: 121 GQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLG-NGD 179
Query: 349 ADGQVCSLLFLSI 361
DG + ++L +
Sbjct: 180 VDGGIGGNVYLPV 192
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 8/284 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VY +G N GQLG + P P +L + +Q G ++ G+VYA G +
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G + V+ P L+ S++++F+ + A G LS +G VY++ G D +L
Sbjct: 4013 GGRLGIGGIDS--VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKL 4070
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + P L+ L + VV IA G + AC + +Y+ G G G+LGHG
Sbjct: 4071 GHGNRVSYDRPK-LITALSGLEVVCIACGGAHS---ACLTARGRIYTWGKGRYGRLGHGD 4126
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
D+ P+L+E + V +G + D V +WG G YG LG G E +
Sbjct: 4127 SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKL 4186
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P + L ++ I V G + + + G VY++G G+ LGH
Sbjct: 4187 PMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGH 4230
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 49 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG ++ + S G +++ G ++G+LG G + PR P S +R + +G
Sbjct: 3095 IAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGK 3154
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+VY++G+ G+ +G + T + +P+L+ESL V+ A G+ +A ++
Sbjct: 3155 HALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSACVT 3212
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH + + P ++ L N V+Q+A G LA G
Sbjct: 3213 ARGHLYTWGLGEYGRLGHGDDNIQLVPK-MVEALANYRVIQVACGSRDAQTLALTACG-K 3270
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P +E+ L + V GA + + +DG V TWG
Sbjct: 3271 VFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGV--TQVECGAQFSLALTRDGEVWTWGK 3328
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G Y LGHG + P +V+AL + IHVA G V+ + V+++G + G+
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGN 3388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 18/243 (7%)
Query: 109 LISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
L +D +V+ +G KD G GV+G+K V P +L + V A G+ ++S
Sbjct: 3052 LPNDCPKVFVWGLNDKDQLG----GVKGSK-VKVPVFSPALSALRPVHIAGGSKTLFIVS 3106
Query: 166 REGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+G+++ G + RLG H + +P L ++ V ++A ALA G
Sbjct: 3107 HDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLS---HVLVRRVAVHSGGKHALALTADG 3163
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VYS G G GKLGHG+R + PRLIE L + + +A G+ H+A V G + TW
Sbjct: 3164 -KVYSWGEGEDGKLGHGNRITLEAPRLIES--LAGERVISIACGSAHSACVTARGHLYTW 3220
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESA 341
G G YG LGHG++ + VPK+V+AL + + I VA G D T ++ G V+S+G G+
Sbjct: 3221 GLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFG 3280
Query: 342 SLG 344
LG
Sbjct: 3281 KLG 3283
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T+ G VYS+G G+LGHG PR I SL G R+I A G+ +
Sbjct: 3151 SGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSAC 3210
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ G +Y +G +G +G +LV P++VE+L N V+Q A G + T L+
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV--PKMVEALANYRVIQVACGSRDAQTLALTAC 3268
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G+V+++ G+ +LG P +VE L ++ V Q+ G + LAL
Sbjct: 3269 GKVFSWGDGDFGKLGRGGSDGCAIPMNVE------RLNSLGVTQVECGAQFSLALT---R 3319
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V++ G G +LGHG + P L+E + + + VA GA H V + +V
Sbjct: 3320 DGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWA 3377
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVK 312
WG +G G+G P +V + V+
Sbjct: 3378 WGDNDHGQQGNGTTCVNRRPALVAGVEGVQ 3407
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 147/314 (46%), Gaps = 8/314 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G AVT G VY+ G + G+LG G + +P + S+Q + I + A +G
Sbjct: 3988 QLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGG 4047
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + + P+L+ +L + VV A G +A L
Sbjct: 4048 KHCLALSADGEVYSWGEGEDGKLGHGNRVS--YDRPKLITALSGLEVVCIACGGAHSACL 4105
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ GR+YT+ G RLGH + + P L+ L + V+ +A G L C
Sbjct: 4106 TARGRIYTWGKGRYGRLGHGDSEDQLIPK-LVEALSSFRVIDVACGSGDAQTL-CITDDD 4163
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P I+ + L+ + V G+ + + Q G V TWG
Sbjct: 4164 NVWSWGDGDYGKLGRGGSEGCKLPMRIDCLK--GLRVIKVECGSQFSVALCQCGSVYTWG 4221
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+ E P V + + +ATG ++ G+VY++G + LG
Sbjct: 4222 KGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG 4281
Query: 345 HNAIADGQVCSLLF 358
Q LL
Sbjct: 4282 DGTTLAAQRPRLLM 4295
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P +L +R + A G+ ++S G+++A G+ +
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEGT 3118
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ + V++P+ L ++ V + A+ G L+ +G+VY++ G D +L
Sbjct: 3119 NGR--LGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKL 3176
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH P L+ +L V+ IA G + AC + +Y+ G G G+LGHG
Sbjct: 3177 GHGNRITLEAPR-LIESLAGERVISIACGSAHS---ACVTARGHLYTWGLGEYGRLGHGD 3232
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD--GRVCTWGWGRYGCLGHGNEECE 299
+ P+++E L N + + VA G+ A + G+V +WG G +G LG G +
Sbjct: 3233 DNIQLVPKMVEA--LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGC 3290
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++P V+ LN + V G + ++ DG+V+++G G+ LGH
Sbjct: 3291 AIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGH 3336
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G HS +T++G +Y++G G+LGHG +E++ P+ + +L R+I A G+G +T+
Sbjct: 4098 GGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTL 4157
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
I+D V+++G +G+ G +G KL P ++ LK + V++ G+ F+ L +
Sbjct: 4158 CITDDDNVWSWGDGDYGKLGRGGSEGCKL---PMRIDCLKGLRVIKVECGSQFSVALCQC 4214
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+ RLGH + + P + G ++ +V IA G L +AC +G VY
Sbjct: 4215 GSVYTWGKGDYHRLGHGSYEHVRRPMRVTG-MQGKMIVSIATGS--LHCVACTDTG-EVY 4270
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+ G G+LG G+ + PRL+ Q +N+ P +
Sbjct: 4271 TWGDNDEGQLGDGTTLAAQRPRLLMALQ-VNIIPTL 4305
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+++ G VYS+G G+LGHG RP+ I +L G+ ++ A G +
Sbjct: 4045 SGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSAC 4104
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ G++Y +GK +G +G +L+ P+LVE+L + V+ A G+ T ++ +
Sbjct: 4105 LTARGRIYTWGKGRYGRLGHGDSEDQLI--PKLVEALSSFRVIDVACGSGDAQTLCITDD 4162
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + L+ + V+++ G + +AL CQ +VY
Sbjct: 4163 DNVWSWGDGDYGKLGRGGSEGCKLPM-RIDCLKGLRVIKVECGSQFSVAL-CQCG--SVY 4218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P + Q + V +A G+ H G V TWG
Sbjct: 4219 TWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMI--VSIATGSLHCVACTDTGEVYTWGDND 4276
Query: 288 YGCLGHGNEECESVPKVVQAL 308
G LG G P+++ AL
Sbjct: 4277 EGQLGDGTTLAAQRPRLLMAL 4297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 19/263 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGA-GRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P + L+ I Q + + GR L S G +++G G +G T +PQ +
Sbjct: 514 PHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHG--DTAARDAPQPL 571
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
L + VV+ A G +AV++ G +YT+ G RLGH T N + P P+ NI
Sbjct: 572 HHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIE 631
Query: 204 -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
++ +A G+ L C G AV G G G PR + + + V
Sbjct: 632 RIIDVALGWGEGSTLCCTWEG-AVQVFGEGEAGT-----------PRALSALAMFRVTRV 679
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
WHAA+ G+V TWG G LGHGN E +PK+V+AL +K + ++ G
Sbjct: 680 YTGE-HWHAALT-DGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASH 737
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
+S +G ++ +G E + +
Sbjct: 738 GIALSSEGVLFVWGTHERTQISN 760
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 26/279 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H + +S G +S+G G+LGHG T P+P+ L +++ AAG + +I+
Sbjct: 536 HYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSR 595
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G +Y +G+ + G +G L P +++ I V G T + EG V
Sbjct: 596 GALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQ 655
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G P L L V ++ G + AL G VY+ G
Sbjct: 656 VFGEGEAG-----------TPR-ALSALAMFRVTRVYTGEHWHAALT---DGGQVYTWGK 700
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G +LGHG+ K P+L+E Q + + V ++ GA H + +G + WG
Sbjct: 701 GDGYRLGHGNMESTKIPKLVEALQGIKI--VDLSLGASHGIALSSEGVLFVWG------T 752
Query: 292 GHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVSED 329
+ VP+ V+A N KA V++G F SE+
Sbjct: 753 HERTQISNPVPQPVKAFNPSFKANGVSSGPTQIFAWSEE 791
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 35/271 (12%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L IRI Q A +L++ G VY D+ +P LV L++ +
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPYDTM--------------TPHLVPGLESKTI 525
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
Q + + L R +SWG D RLGH P PL L + VV++AA
Sbjct: 526 TQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPL-HHLAHHEVVRVAA 584
Query: 210 GYCYLLALACQP---SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
G LAC S A+Y+ G G G+LGHG+ + P+ + F N++ ++ A
Sbjct: 585 G------LACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVS-FNAHNIERIIDVA 637
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
W G+ +C G G G P+ + AL + V TG++ +
Sbjct: 638 LGW-----GEGSTLCCTWEGAVQVFGEGEA---GTPRALSALAMFRVTRVYTGEHWHAAL 689
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
++ G VY++G G+ LGH + ++ L+
Sbjct: 690 TDGGQVYTWGKGDGYRLGHGNMESTKIPKLV 720
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGI-RIIQAAA--GAG 105
AG S +TS+G +Y++G + G+LGHGT E P+P+ + I RII A G G
Sbjct: 584 AGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEG 643
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G V FGE E G +P+ + +L V + G + A L+
Sbjct: 644 STLCCTWEGAVQV-----FGEGEAG--------TPRALSALAMFRVTRVYTGEHWHAALT 690
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G+VYT+ G+ RLGH + P L+ L+ I +V ++ G + +AL+ +
Sbjct: 691 DGGQVYTWGKGDGYRLGHGNMESTKIPK-LVEALQGIKIVDLSLGASHGIALSSE 744
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
VQ+ G L A+ P G VY+ G G GG+LG G P L+ Q + + V
Sbjct: 3987 VQLVGGEQTLFAVT--PDG-KVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVAC 4043
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G H + DG V +WG G G LGHGN PK++ AL+ ++ + +A G +
Sbjct: 4044 NSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSA 4103
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQVCSLL-FLSIFQYLQI 367
++ G +Y++G G LGH D + L+ LS F+ + +
Sbjct: 4104 CLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDV 4147
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ +T V+S+G G+LG G +E P I L+G+R+I+ G+ ++
Sbjct: 4151 SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVA 4210
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G VY +GK + +G + V P V ++ +V A G+ + G
Sbjct: 4211 LCQCGSVYTWGKGDYHRLGHG--SYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGE 4268
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
VYT+ ++ +LG T P L+ NI
Sbjct: 4269 VYTWGDNDEGQLGDGTTLAAQRPRLLMALQVNI 4301
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G S+A+T G V+++G +LGHG RP + +L+G R+I A GA
Sbjct: 3305 TQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGAL 3364
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
+ ++ QV+A+G + G+ G T + P LV ++ +
Sbjct: 3365 HCLAVTSENQVWAWGDNDHGQQGNGT--TCVNRRPALVAGVEGV 3406
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHT 468
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEV 526
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + +E Q+A G+C +
Sbjct: 527 MAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHCLTV 585
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ ++ D P +E N + + GA+H AV+
Sbjct: 586 ALT---TSGHVYTMGSAVYGQLGN-AQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 640
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + ++ P +V+AL D + V G
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCG 684
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V+ P+L+++
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 397
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 398 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 456 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRESISVPREVE--SLKGLRT 510
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++ + VP V AL
Sbjct: 511 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALV 570
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG NA ADG +
Sbjct: 571 EPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADGML 613
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 464 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 523
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G +G KLV P V +L Q A G+
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLV--PTCVAALVEPNFCQVACGH 581
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 582 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 640
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 641 ---SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWV 697
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 698 SGVDQSMCS 706
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + SG LGHG W P+ + LQG+ I + G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AG+++ FG +FG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+ G+++T+ G+ RLGH + + P + L Q+A G+ +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAALVEPNFCQVACGHSLTV 544
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + +Y++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + +LV P V +L Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G +YT +LG + + + P + G L V ++A G ++ L
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHGS D P L+E + ++ + AA H V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 657 SGVDQSMCS 665
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 197
P+ +ES+ + V A GN A+++++G V FSWG + RLGH + + P L+
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L N+ + +A G + A+ + + G G LGHG P+ + L
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
L ++ G WH A+V G++ T+G G +G LGHG+ + S+P+ V++L ++ + A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473
Query: 318 TGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
G + T V E G ++++G G+ LGH
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH 513
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGH 345
PK++ AL+++ VA G+Y T V+ GD+Y++G G S LGH
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH 396
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 155/293 (52%), Gaps = 17/293 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
V+ +G ++ GQL G +EE P+ + LQ + I + + G T++++ G++Y+ G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 122 DSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ +GE + ++ V+ +LV SL ++ V+QAA G+ F+ V++ G V FSWG +
Sbjct: 64 NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEV--FSWGRND 121
Query: 180 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+ LG + E P L+ +L VVQI G + LAL ++S GC G+
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALT---DDGRLFSWGCNKYGQ 178
Query: 237 LGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
LG GS + P +Q L P+ +A+G H+ ++ V WG +G LG
Sbjct: 179 LGLGSSHSFHDTP---QQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN 235
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+E +S P + ++L + K ++++ G+ T ++++G V+SFG G LGHN+
Sbjct: 236 DEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS 288
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 149/300 (49%), Gaps = 30/300 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP----------IRSLQGIRIIQA 100
G H++ VT G +YS GSN G+LGH +PR + SL +++IQA
Sbjct: 45 GEKHTLIVTKDGKLYSCGSNEYGELGHS------KPRSRAVSIDVVELVSSLSSMQVIQA 98
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G+ +++I+ AG+V+++G++ G+ G + P+L++SL VVQ G
Sbjct: 99 AGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANH 158
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLA 216
L+ +GR+ FSWG + +LG + + + + L IP+ QIA+G + ++L
Sbjct: 159 CLALTDDGRL--FSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILT 216
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+ AV+ G G+LG D+ HP L + L N + + ++ G H + +
Sbjct: 217 WS-----RAVFGWGKNSFGQLGLNDEYDKSHPTLCK--SLRNQKVMYISCGEDHTVALTK 269
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSF 335
+G V ++G G +G LGH + + E +PK V L VA G T S G +Y+F
Sbjct: 270 EGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
QA G S+ +T+ G V+S+G N GQLG G + EEE +P+ ++SL ++Q GA
Sbjct: 97 QAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGA 156
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++D G+++++G + +G+ G + +PQ + L+ I + Q A G + +L
Sbjct: 157 NHCLALTDDGRLFSWGCNKYGQLGLGSSHS-FHDTPQQIVCLRGIPIAQIASGGNHSFIL 215
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ V F WG ++ +LG + E + P L +L N V+ I+ G + +AL +
Sbjct: 216 TWSRAV--FGWGKNSFGQLGLNDEYDKSHP-TLCKSLRNQKVMYISCGEDHTVALTKEG- 271
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
V+S G G G+LGH S +E P+ + +
Sbjct: 272 --GVFSFGAGGFGQLGHNSTQNEILPKRVMEL 301
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+T G ++S+G N GQLG G++ P+ I L+GI I Q A+G
Sbjct: 151 QITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGN 210
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ + V+ +GK+SFG+ G+ + P L +SL+N V+ + G T L+
Sbjct: 211 HSFILTWSRAVFGWGKNSFGQ--LGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALT 268
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V++F G +LGH++ N++ P ++ + ++ + Q+A G + +A + PS
Sbjct: 269 KEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSV-ISQVACGRRHTVAFS--PSSGK 325
Query: 226 VYS 228
+Y+
Sbjct: 326 MYA 328
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 41 CRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
C+ +Q + G H++A+T +G V+SFG+ GQLGH +T+ E P+ + L G
Sbjct: 246 CKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSV 305
Query: 97 IIQAAAGAGRTMLIS-DAGQVYAF 119
I Q A G T+ S +G++YAF
Sbjct: 306 ISQVACGRRHTVAFSPSSGKMYAF 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +G HS +T V+ +G NS GQLG ++ P +SL+ +++ + G
Sbjct: 203 AQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGED 262
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++ G V++FG FG + G T+ P+ V L + Q A G T S
Sbjct: 263 HTVALTKEGGVFSFGAGGFG--QLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFS 320
Query: 166 -REGRVYTF 173
G++Y F
Sbjct: 321 PSSGKMYAF 329
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
+G T P+ + + Q L+++ + + G H +V +DG++ + G YG LGH
Sbjct: 17 IGFSEETSILSPKEVSRLQELDIKEI--SCGEKHTLIVTKDGKLYSCGSNEYGELGHSKP 74
Query: 297 ECESVP----KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+V ++V +L+ ++ I A G + V++ G+V+S+G + LG ++
Sbjct: 75 RSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLS 131
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 25/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 370 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 429
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + K ++ P+ VESLK + VQAA G + TA +
Sbjct: 430 AVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEV 487
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+ L
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHS--L 544
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+A SG VY++G + G+LG+ D K P +E +L +A GA+H AV+
Sbjct: 545 TVARTTSGH-VYTMGSPVYGQLGN-PLADGKLPTRVEG-KLSKSFVEEIACGAYHVAVLT 601
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V TWG G G LGHG+ + + P +V+AL D + +A G T+F +
Sbjct: 602 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG--TSFTAA 651
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++++G++S G +GV V P+L+++
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VMHPKLIDA 358
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG R P+ +E L L+ V
Sbjct: 419 VSSISCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSISLPKEVE--SLKGLRTVQ 473
Query: 264 VAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V G++ TWG G G LGHG++E + VP V AL +
Sbjct: 474 AACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 533
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VA G T + G VY+ G LG N +ADG++
Sbjct: 534 NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLG-NPLADGKL 574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 129/313 (41%), Gaps = 35/313 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + P+ + SL+G+R +QAA G T +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAV 484
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 485 IEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 542
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T + G VYT +LG+ + P + G L V +IA G ++ L
Sbjct: 543 SLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEIACGAYHVAVLT 601
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 602 ---SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWV 658
Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
G D +C+ + R+ C G C S K A N KA V Y
Sbjct: 659 SGVDQSMCSGCRLPFNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 718
Query: 322 TTFVVSEDGDVYS 334
+ + D S
Sbjct: 719 NKLRKAIETDASS 731
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G + D P+ +E +L++Q + A G HAA+V + G + +WG G LGHG +
Sbjct: 293 GVKMDSLFPKALESAVVLDVQNI--ACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV 350
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK++ AL++ VA G+Y T V+ GD+Y++G G
Sbjct: 351 MHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDG 389
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 160/336 (47%), Gaps = 44/336 (13%)
Query: 45 NSQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
NS ++A G +AV S+ G +Y +G NS GQLG G + PR +++LQG + A
Sbjct: 112 NSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVKALQGKIVKVVACA 171
Query: 104 AGRTMLISDAGQVYAFGKDSFGE-----------AEYGVQG-----TK-----------L 136
T+ D G YA+G G A GV TK L
Sbjct: 172 QEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPTKGARTEPLASACL 231
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVL----SREGRVYTFSWGNDARLGHHTEPNDVEP 192
V +P+++ESL F+ A G + TA L + ++T G + RLGH E + P
Sbjct: 232 VCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLP 291
Query: 193 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLI 251
P+ LEN+ + IA G + AC SG +Y G GKLG GS R + P+ +
Sbjct: 292 TPVH-ALENLNITAIACGAHHT---ACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHV 347
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALN 309
L N V VA G+ H+A V DG + TWG GR LGH E E +P+ V+AL
Sbjct: 348 -GGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEFLPRRVEALV 404
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ IHV GD T + E+G+V+++G S LGH
Sbjct: 405 GLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 438
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 39/313 (12%)
Query: 66 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
SF ++ S + T+ E PR + +L+GI AAG + ++S +G++Y +G +S
Sbjct: 82 SFSASPSLAVFAETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNS-- 139
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 184
E + G + + P++V++L+ V A T +G Y + + RLG H
Sbjct: 140 EGQLGTGDRRDASVPRVVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHG 199
Query: 185 ------------------TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC------- 219
T+ EP + V++ GY ++ +AC
Sbjct: 200 LSIPSSAGLGVSAPPGAPTKGARTEPLASACLVCTPRVLESLCGY-FITDVACGIYHTAF 258
Query: 220 ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ ++++ G GL G+LGHG D P + + LN+ +A GA H A V
Sbjct: 259 LGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNI--TAIACGAHHTACVT 316
Query: 276 QDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVY 333
G + WG +G LG G+ + +PK V L + + VA G + V+ DG++Y
Sbjct: 317 SGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELY 376
Query: 334 SFGCGESASLGHN 346
++G G LGH
Sbjct: 377 TWGQGR--RLGHE 387
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ PRL++ + +N VAAG AVV Q G + WG G LG G+ SVP+
Sbjct: 98 ESSSPRLVDALKGIN--SASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPR 155
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
VV+AL VA T +DG Y++GC + LG + ++
Sbjct: 156 VVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLS 201
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPI-RSLQGIRIIQAA 101
N AIA G H+ VTS G +Y +G + G+LG G+T + P+ + L+ ++ A
Sbjct: 301 NITAIACGAHHTACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVA 360
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G+ + ++ G++Y +G+ + VQG P+ VE+L +FV+ G+ T
Sbjct: 361 LGSQHSACVTTDGELYTWGQGR--RLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAHT 418
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP----LLGTLENIPVVQIAAGYCYLLAL 217
A + G V+ +WG LGH D+E P L L VVQ++ + A
Sbjct: 419 ACIVENGNVW--AWGTSRILGH----GDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAF 472
Query: 218 ACQP 221
C P
Sbjct: 473 -CDP 475
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q + G + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4165
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4166 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4223
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE V Q+A G + L ++ G
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSAD--G 4280
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG+V T+
Sbjct: 4281 MMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGKVFTF 4338
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L+ + VA G T V+S GDVY++G L
Sbjct: 4339 GQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQL 4398
Query: 344 G 344
G
Sbjct: 4399 G 4399
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 138/288 (47%), Gaps = 11/288 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G T +IS
Sbjct: 370 GETPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQTIEA--GQYCTFVISS 427
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
G V A GK S+G G + E + I V ++ G + T + EG V+
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LGH P + G L+ VV ++AGY + A++ +Y+ G
Sbjct: 488 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 544
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 545 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 600
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG
Sbjct: 601 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 648
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 23/312 (7%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 411 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 470
Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 471 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 528
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 529 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 584
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 585 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 641
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-- 336
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 642 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNN 699
Query: 337 ----CGESASLG 344
CG+ S G
Sbjct: 700 SMGQCGQGNSTG 711
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 370 GETPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLASSFADAQTIEA--GQYCTFVI 425
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH ++ + + + G+ L
Sbjct: 426 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----TL 478
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 479 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSED 536
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 537 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 594
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 595 GGDNGKLGH 603
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 144/281 (51%), Gaps = 16/281 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
++ S + GH++A T++G V+S+G G+LGHG + + P+ I+ LQG ++ +
Sbjct: 465 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 524
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +S+ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T
Sbjct: 525 AGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHT 580
Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS++GR V++F G++ +LG H + N V ++ L+ + + ++ AG LAL
Sbjct: 581 IALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT-- 637
Query: 221 PSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S VY+ GC G LG G S P+LIE +L + V ++ G H + D
Sbjct: 638 -STGQVYAWGC--GACLGCGSSEATALRPKLIE--ELATTRVVDISIGDSHCLALSHDNE 692
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
V WG G G GN + PK V L+ V ++ G
Sbjct: 693 VYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4167 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4226
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG-RVY 171
G+++ FG +G G K + P+ V +L+ V Q A G T V+S +G V+
Sbjct: 4227 DGKLFTFGNGDYGRLGLGNTSNKKL--PEKVTALEGYHVGQVACGLNHTLVVSADGMMVW 4284
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL V++ G
Sbjct: 4285 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGKVFTFGQ 4340
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + +++Q V V GA H V+ G V TWG G L
Sbjct: 4341 DRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAV--GAEHTLVLSSTGDVYTWGSNSEGQL 4398
Query: 292 GHGNEECESVPKVVQALNDVKAIH 315
G G+ P +V L K IH
Sbjct: 4399 GLGHTNHVREPTLVTTLQG-KNIH 4421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +
Sbjct: 4204 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHV 4263
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+++S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4264 GQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4321
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G+V+TF G D +G +H P V L I + +A
Sbjct: 4322 GTQFSVALTKDGKVFTF--GQDRLIGLPEGRARNHNRPQQVP------GLSGIHIQDVAV 4373
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + L L+ S VY+ G G+LG G + P L+ Q N+ ++AG
Sbjct: 4374 GAEHTLVLS---STGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQ--ISAGRC 4428
Query: 270 HAA 272
H+A
Sbjct: 4429 HSA 4431
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 576 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 635
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 636 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 689
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 690 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALPR 745
Query: 223 GMAV 226
V
Sbjct: 746 DRQV 749
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +NI V Q G T V+ G V G+ RLG +D+
Sbjct: 4084 QLAEAGRNILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNS-DDL 4142
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4143 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4197
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4198 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKV 4255
Query: 306 QALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLG 344
AL VA G T VVS DG V++FG G+ LG
Sbjct: 4256 TALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLG 4295
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4116 VIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4175
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4176 GEVFSWGDGDYGKLGH 4191
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G+ + G GHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + +L Q+A G+C+ +
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVP-TCVASLVEPNFCQVACGHCFTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALTT--SGH-VYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ + + P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G+VY++G++S G +GV V P+L+++
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLIDA 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WGN GH E + P L G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLSGHGNEVSHWMPKRLNGPLEG 417
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSISVPREVE--SLKGLRT 472
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++E VP V +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLV 532
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG V
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADGMV 575
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + T+LV P V SL Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV--PTCVASLVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
FT L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGVDQSMCS 668
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 22/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 429
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + Q+A G+ +
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG + D K P +E ++L +A GA+H AV+
Sbjct: 548 ALTTKGH---VYTMGSPVYGQLGI-PQADGKLPICVE-WKLSESFVEEIACGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D +A G T +
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAI 653
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 28/277 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++++G+++ G +GV V P+L+E+
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSD--VLHPKLIEA 358
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L N + A G + T ++ G +YT WGN LGH + + P + G LE
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYT--WGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG 416
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 417 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 471
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++E + VP V AL
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV-ALV 530
Query: 310 DVKA--IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+VK VA G T ++ G VY+ G LG
Sbjct: 531 NVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG 567
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 484
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV + + ++K F Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNF-CQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ +G VYT +LG + + P + L V +IA G ++ L
Sbjct: 544 SLTVALTTKGHVYTMGSPVYGQLG-IPQADGKLPICVEWKLSESFVEEIACGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + +++ + AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 197
P+ +ES + V A G A+++++G + FSWG +A RLGH + + + P L+
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEI--FSWGEEAGGRLGHGVDSDVLHPK-LIE 357
Query: 198 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L N + +A G + A+ G Y+ CGL LGHG++ P+ +
Sbjct: 358 ALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYN--CGL---LGHGNQVSHWVPKRVNG 412
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+ V++L ++
Sbjct: 413 -PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT 471
Query: 314 IHVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
+ A G + T V E G ++++G G+ LGH
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 515
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G + D P+ +E +L++Q + A G HAA+V + G + +WG G LGHG +
Sbjct: 293 GVKMDSLFPKSLESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV 350
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK+++AL++ VA G+Y T V+ GD+Y++G G
Sbjct: 351 LHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNG 389
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
H+ AVT G +YS+G +++ G LGHG W P+ + L+G+R+ A G T L+
Sbjct: 375 HACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALV 434
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
+ G ++ FG +FG G K SP+ VESLK + V+AA G + TA +
Sbjct: 435 TTTGLLFTFGDGTFGV--LGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 492
Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G RLGH + + P + L + Q+A GY +AL
Sbjct: 493 SSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPT-CVAALVDHNFRQVACGYSLTVALT 551
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ V+++G G+LG + D K P L+E +L+ +A GA H AV+ +
Sbjct: 552 TK---GGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLTHNS 606
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E + P +V+AL + + +A G T +
Sbjct: 607 EVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAI 654
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 360
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L + A G + ++ G +Y SWG N LGH + + P + G LE
Sbjct: 361 LASSTTEVVACGEYHACAVTLSGDLY--SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEG 418
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V IA G + + +G+ +++ G G G LGH R PR +E L L+
Sbjct: 419 LRVASIACGPWHTALVTT--TGL-LFTFGDGTFGVLGHNDRKSAYSPREVES--LKGLRT 473
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 474 VRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALV 533
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
D VA G T ++ G V++ G LG + ADG++ L+
Sbjct: 534 DHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLG-DPQADGKLPGLV 580
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VT+ G++++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 427 GPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAV 486
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G G +G + +LV P V +L + Q A G
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV--PTCVAALVDHNFRQVACGY 544
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ +G V+T +LG + + P + G L V IA G ++ L
Sbjct: 545 SLTVALTTKGGVFTMGSSTYGQLG-DPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLT 603
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
VY+ G G G+LGHG D P L+E + ++ + AA H +
Sbjct: 604 ---HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICLHKWL 660
Query: 274 VGQDGRVCT 282
G D C+
Sbjct: 661 SGADQNACS 669
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 23/288 (7%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
H AVT G +Y++G ++S G LGHG W P+ + L+ +R+ A G T ++
Sbjct: 372 HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
+ AGQ++ FG +FG G + SP+ VESLK + V+AA G + TA +
Sbjct: 432 TTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 489
Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G+ RLGH + + P + L + ++A G+ +AL
Sbjct: 490 SSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTVALT 548
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ V+++G + G+LG + D K P ++E +L++ +A GA H A V
Sbjct: 549 TKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVTLKS 603
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG++E + P +V+AL + + +A G T V
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 134/290 (46%), Gaps = 30/290 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L + A G + ++ G +YT WG+ LGH + + P + G LE
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ V IA G + ++ A Q +++ G G G LGH R PR +E + L
Sbjct: 416 VRVASIACGPWHTAVVTTAGQ-----LFTFGDGTFGVLGHNDRQSAYSPREVESLK--GL 468
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG++E VP V A
Sbjct: 469 RTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAA 528
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L D VA G T ++ G+V++ G LG + ADG++ ++
Sbjct: 529 LVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMV 577
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VT+ G +++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G G +G + +LV P V +L + + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ +G V+T +LG + + P + G L + V IA G + +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMVEGRLVDAYVEDIACGAHH---VA 597
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
C VY+ G G G+LGHG + D P L+E + ++ + AA H +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657
Query: 274 VGQDGRVCT 282
G D C+
Sbjct: 658 SGADQNACS 666
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G Y+ + SV G GG + D P+ +E +L++Q VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAMN----LDAPLPKALESAIVLDVQ--YVACG 317
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
HAA+V + G V TWG G LGHG + S P++V+AL VA G+Y V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 328 EDGDVYSFGCGESASLG 344
GD+Y++G G + SLG
Sbjct: 378 LSGDLYTWGDG-THSLG 393
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+C +
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALTT--SGH-VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG + ++ P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 30/284 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I V I+ G + L+ A Q +++ G G G LGHG R PR +E L L
Sbjct: 418 IHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRASLSVPREVE--SLKGL 470
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG+++ VP V A
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAA 530
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
L + VA G T ++ G VY+ G LG N ADG
Sbjct: 531 LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NPQADG 573
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGSDQSMCS 668
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 19/303 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
++A+ S G V+++GSN +GQLG GTT ++ P P+ L GI+ I G +M +++ G
Sbjct: 96 TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSGIKAISGGLGY-HSMALTENG 154
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK+ GE G T SP LV L ++ + A G +++ L +G ++ +
Sbjct: 155 TVWTWGKNDNGELGNGT--TVQQNSPVLVIGLSDVTAIAA--GGYYSLALKSDGTIWAWG 210
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ LG T + P + G + V+ I AG + LA+ + V++ G +
Sbjct: 211 ANGNGELGDGTIVDKHTPVQVSGLSD---VIAITAGGSHSLAIKQDGT---VWAWGINMY 264
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G LG G+RT+ P ++ NLQ + +A G H+ + Q+G V WG G LG
Sbjct: 265 GTLGDGTRTNRTIP-----VKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGL 319
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + P+ + + V + +A G + + + +DG V+ +G S +G D
Sbjct: 320 GHNSSRTTPEQLTGIEHV--LDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNA 377
Query: 354 CSL 356
+L
Sbjct: 378 PAL 380
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 138/302 (45%), Gaps = 21/302 (6%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG H+ ++ S G VY +G GQ+G P R L + I G TM
Sbjct: 40 VAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIH--TGVRSTM 97
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + G+ G K V +P V L I + +G + + L+ G
Sbjct: 98 ALRSDGTVWTWGSNENGQLGIGTTADKNVPTP--VSGLSGIKAISGGLG-YHSMALTENG 154
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ ++ LG+ T P ++G + V IAAG Y LAL + +++
Sbjct: 155 TVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD---VTAIAAGGYYSLALKSDGT---IWA 208
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ D+ P Q+ L V+ + AG H+ + QDG V WG
Sbjct: 209 WGANGNGELGDGTIVDKHTP-----VQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGINM 263
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGH 345
YG LG G ++P V+ L +KAI A G + + + ++G+V+ +G LGH
Sbjct: 264 YGTLGDGTRTNRTIPVKVRNLQHIKAI--AGGGHHSLALDQEGNVWGWGDNSRGQLGLGH 321
Query: 346 NA 347
N+
Sbjct: 322 NS 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ S G ++++G+N +G+LG GT ++ P + L +I AG ++
Sbjct: 192 AGGYYSLALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLS--DVIAITAGGSHSLA 249
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I G V+A+G + +G G + + + P V +L++I + A G + L +EG
Sbjct: 250 IKQDGTVWAWGINMYGTLGDGTRTNRTI--PVKVRNLQHIKAI--AGGGHHSLALDQEGN 305
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V+ WG+++R LGH++ P L G +E+ V+ IA G + AL
Sbjct: 306 VW--GWGDNSRGQLGLGHNSSR--TTPEQLTG-IEH--VLDIAGGGFHSAALKKDGR--- 355
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
V+ G G++G G+R D P L +
Sbjct: 356 VWGWGLNSSGQIGDGTRNDRNAPALTK 382
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + TA L G VY + G+ ++G P G + V+ I G +A
Sbjct: 42 GYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLND---VMDIHTGVRSTMA 98
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V++ G G+LG G+ D+ P + + + +H+ + +
Sbjct: 99 LRSDGT---VWTWGSNENGQLGIGTTADKNVPTPVSGLSGI---KAISGGLGYHSMALTE 152
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G V TWG G LG+G ++ P +V L+DV AI A G Y + + DG ++++G
Sbjct: 153 NGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAI--AAGGYYSLALKSDGTIWAWG 210
Query: 337 CGESASLGHNAIAD 350
+ LG I D
Sbjct: 211 ANGNGELGDGTIVD 224
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG +H A + G V WG G G +G + P + LNDV IH TG +T
Sbjct: 39 LVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIH--TGVRST 96
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ DG V+++G E+ LG AD V +
Sbjct: 97 MALRSDGTVWTWGSNENGQLGIGTTADKNVPT 128
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 264
++ AGY + +L VY G G G++G + P Q L V+ +
Sbjct: 38 KLVAGYYHTASLVSSGD---VYVWGQGDRGQIGDAAWNARNTP-----VQARGLNDVMDI 89
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G + DG V TWG G LG G ++VP V L+ +KAI G Y +
Sbjct: 90 HTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSGIKAISGGLG-YHSM 148
Query: 325 VVSEDGDVYSFGCGESASLGH 345
++E+G V+++G ++ LG+
Sbjct: 149 ALTENGTVWTWGKNDNGELGN 169
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 142/284 (50%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+C +
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALT---TSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG + ++ P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 30/284 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I V I+ G + L+ A Q +++ G G G LGHG R PR +E L L
Sbjct: 418 IHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRASLSVPREVE--SLKGL 470
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG+++ VP V A
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAA 530
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
L + VA G T ++ G VY+ G LG N ADG
Sbjct: 531 LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NPQADG 573
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGSDQSMCS 668
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 15/299 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ + G VY+ GSN GQLG + P + +++ I + G T+ +
Sbjct: 43 GWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHT--NPESVHAIETFTITKVTCGKAHTVAV 100
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
SD G V+A+G +S+G+ G + K+ T P++++ L + VVQ A G + L+ G
Sbjct: 101 SDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGH 160
Query: 170 VYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+ F WG+++ +LG T + EP P+L +L +P + I+AG + AL+ S A+
Sbjct: 161 L--FCWGDNSSGQLGIGKTHSSMSEPAPVL-SLNGVPFMLISAGGAHSFALS---SSGAL 214
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG TD P L++ + + V+ G H AV+ DG V T+G G
Sbjct: 215 FGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGV--CYVSCGEKHTAVLTSDGGVFTFGCG 272
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
G LGH + E P+ V L +A G +T +V G VY+FG G LG
Sbjct: 273 TSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLG 331
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A+T G ++ +G NSSGQLG G T P P+ SL G+ + +AG
Sbjct: 144 QIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGA 203
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G ++ +GK+ +G+ GV T P L++SL++ V + G TAVL+
Sbjct: 204 HSFALSSSGALFGWGKNEYGQL--GVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLT 261
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+TF G +LGH++ ++ P + + ++ V QIA G + LAL PS
Sbjct: 262 SDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSV-VTQIACGRAHTLALV--PSSGR 318
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
VY+ G G G+LG G + P
Sbjct: 319 VYTFGRGGDGQLGLGVTNNCNSP 341
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFG 120
++ +G S GQLG G TE+E+ PR + +L+ + + + G T + G VY G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+ FG+ + K T+P+ V +++ + + G T +S +G V F+WG+++
Sbjct: 61 SNEFGQ----LGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLV--FAWGDNSY 114
Query: 181 ----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
LG + +L L + VVQIA G + +AL SG ++ G G+
Sbjct: 115 GQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI--SG-HLFCWGDNSSGQ 171
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPV---VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
LG G + H + E +L+L V +++AG H+ + G + WG YG LG
Sbjct: 172 LGIG----KTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ +P ++++L +V+ G+ T V++ DG V++FGCG S LGHN+
Sbjct: 228 HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNS 281
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 24/266 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---WRPRPIRSLQGIRIIQAAA 102
++ G H++AV+ +G+V+++G NS GQ+G G+ +E P+ ++ L + ++Q A
Sbjct: 88 TKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIAC 147
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G +M ++ +G ++ +G +S G+ G + + + P V SL + + + G +
Sbjct: 148 GCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSM-SEPAPVLSLNGVPFMLISAGGAHSF 206
Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA---- 216
LS G + F WG + +LG H D PL L+++ + G CY+
Sbjct: 207 ALSSSGAL--FGWGKNEYGQLGVH----DTTDRPLPTLLKSLR----SQGVCYVSCGEKH 256
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVG 275
A S V++ GCG G+LGH S E PR + F+L+ +A G H A+V
Sbjct: 257 TAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVP 314
Query: 276 QDGRVCTWGWGRYGCLGHG-NEECES 300
GRV T+G G G LG G C S
Sbjct: 315 SSGRVYTFGRGGDGQLGLGVTNNCNS 340
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + G VY+ G N GQLGH + +P + SL I+ + G T+ +
Sbjct: 42 GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK--KPEQVVSLDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D GQV+A+G S G+ + L P+ V+SL + + Q A G + + L+R G +
Sbjct: 100 NDKGQVFAWGLGSDGQLGLSIVEDCLRV-PRTVKSLSEVHITQVACGYWHSLALARGGEI 158
Query: 171 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
FSWG + +LG + V ++ +L+ IP QI+AG + L SG A++
Sbjct: 159 --FSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTL--SG-AIFG 213
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G D + P L++ L + Q V + G H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKT--LRSQQVVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G LGH + E P+ V L +A G +T + G + SFG G + LG
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 12/284 (4%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR +G R+ G T+ + + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V SL +V + G T L+ +G+V+ + G+D +LG
Sbjct: 64 GQLGH----EKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 243
+ + + +L + + Q+A GY + LALA G ++S G G+LG G +
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA---RGGEIFSWGQNKYGQLGLGQQGA 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
P++I+ Q + + +AG H+ + G + WG ++G LG G+ + P
Sbjct: 177 CVCSPQVIQSLQGIPFGQI--SAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPV 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+++ L + +++ G+ T ++++G V++FG G LGHN+
Sbjct: 235 LLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
+Q G HS+A+ G ++S+G N GQLG G P+ I+SLQGI Q +AG
Sbjct: 140 TQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGG 199
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ +G ++ +G++ FG+ G + P L+++L++ VV G TA L
Sbjct: 200 AHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRF--PVLLKTLRSQQVVYICCGEDHTAAL 257
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++EG V+TF G +LGH++ ++V P + + ++ V QIA G + LA PS
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSV-VSQIACGRQHTLAFI--PSSG 314
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHP 248
+ S G G G+LG S + P
Sbjct: 315 KIDSFGLGGNGQLGTRSTCNRISP 338
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG G ++ P +++L+ +++ G
Sbjct: 194 QISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G++ +F G + +LG + N + P P+ G
Sbjct: 312 SSGKIDSFGLGGNGQLGTRSTCNRISPTPVKG 343
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+C +
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALTT--SGH-VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG + ++ P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 30/284 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I V I+ G + L+ A Q +++ G G G LGHG R PR +E L L
Sbjct: 418 IHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRASLSVPREVE--SLKGL 470
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG+++ VP V A
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAA 530
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
L + VA G T ++ G VY+ G LG N ADG
Sbjct: 531 LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NPQADG 573
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGSDQSMCS 668
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 155/316 (49%), Gaps = 33/316 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQGIRIIQAAAGAGR 106
+G H+I V+ G VYS+G GQL G E+ +P I++L R+++ A G
Sbjct: 41 SGEAHNICVSRFGDVYSWGRGKEGQL--GVPEKMLFSTKPNLIKTLLHERVVKVACGNFH 98
Query: 107 TMLISDAGQVYAFGK-DSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++D G+VY +G+ +++ G++ T L+ P + + Q+ I N + L
Sbjct: 99 SLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKP-----KYQSIIENSVSQYL 153
Query: 165 SREGRVYTFSWGND--------------ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ E +Y + GN+ +G + N P + G L N V+ I+AG
Sbjct: 154 NGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ + + A SG +++ G G+LG R P+L++ LL+++ V V+ G H
Sbjct: 214 WAF--SAAVTKSG-KIFTWGFNEKGQLGLKHRWFNSSPQLVK--TLLDVKIVSVSCGRQH 268
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSE 328
V +DG + TWG G +G LGH N + PK V A LN ++ V+ G T V+
Sbjct: 269 IGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGR 328
Query: 329 DGDVYSFGCGESASLG 344
+ +Y+FG GE A LG
Sbjct: 329 NQILYAFGHGEYAQLG 344
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 31/304 (10%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V S G+N +GQLG +E P+ + SL+G I+ ++G + +S G VY++G+
Sbjct: 3 VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62
Query: 124 FGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-----N 177
E + GV L T P L+++L + VV+ A GNF + L+ +GRVY WG +
Sbjct: 63 --EGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVY--EWGQLHKID 118
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
D++ G N + P + + +++ + YL +Y G
Sbjct: 119 DSKTGLEA-TNGLLEMPGMSKPKYQSIIENSVSQ-YL------NGEKEIYDSTSGNNDDD 170
Query: 238 GHGSRTDE---KHP-RLIEQFQ---------LLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
S +++ KH ++I+ Q L N + + ++AG +A V + G++ TWG
Sbjct: 171 DEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWG 230
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ G LG + S P++V+ L DVK + V+ G V+EDGD+Y++G G LG
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290
Query: 345 HNAI 348
H+ +
Sbjct: 291 HSNV 294
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 32/323 (9%)
Query: 51 GPGHSIAVTSKGVVYSFG-------SNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAA 102
G HS+A+T +G VY +G S + + +G E +P +S+ + Q
Sbjct: 95 GNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLN 154
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESL-KNIFVVQAAIG 157
G + + S +G + S E G K++ T+P V+ L N V+ + G
Sbjct: 155 GE-KEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
F+A +++ G+++T+ + +LG + P L+ TL ++ +V ++ G ++ A+
Sbjct: 214 WAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ-LVKTLLDVKIVSVSCGRQHIGAV 272
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+Y+ G G+ G+LGH + HP+ + F L +Q V+ G+ V+G++
Sbjct: 273 T---EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRN 329
Query: 278 GRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDVKAIHVATGDYTTF 324
+ +G G Y LG EE + S PKVV+AL D K +V G T
Sbjct: 330 QILYAFGHGEYAQLG-ATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTL 388
Query: 325 VVSEDGDVYSFGCGESASLGHNA 347
++ED +VY +G G S LG N+
Sbjct: 389 ALTEDNEVYVWGWGSSGCLGLNS 411
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 88 PIRSLQGI----RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
PI+ +QG+ +I +AG + ++ +G+++ +G + G+ G++ +SPQLV
Sbjct: 195 PIQ-VQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQL--GLKHRWFNSSPQLV 251
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENI 202
++L ++ +V + G ++ +G +YT+ G +LGH + + P + +L I
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGI 311
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---------HGSRTDE---KHPRL 250
V Q++ G + + L +Y+ G G +LG GSR + P++
Sbjct: 312 QVSQVSCGSNFTMVLG---RNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKV 368
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+E + ++ V G H + +D V WGWG GCLG ++ + VP++V +++
Sbjct: 369 VEALEDKKIK--YVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISG 426
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFG 336
+ ++ G+ + +V D+ SF
Sbjct: 427 EEISCISAGEKHSLIV-RGSDLTSFA 451
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHAAVVGQDGRVC 281
M+V SVG G+LG + + P+++E + V+V ++G H V + G V
Sbjct: 1 MSVISVGNNKNGQLGIENIKEHLEPKVLESLK----GKVIVSCSSGEAHNICVSRFGDVY 56
Query: 282 TWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+WG G+ G LG + S P +++ L + + VA G++ + +++ G VY +G
Sbjct: 57 SWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWG 112
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G++I + G T
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 449
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ +RLGH + ++P + +++ ++A G+ +
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT-FHRVACGHSLTVG 508
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + VY++G + G+LG+ + D K P L+E +L +A GA+H AV+
Sbjct: 509 LT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLTKDCVEEIACGAYHVAVLTS 563
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E P +V AL + ++A G T +
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 26/253 (10%)
Query: 114 GQVYAFGK------DSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
G VY +G+ FG + G G++ V P+ +ES + V A G A++S
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
R+G V+T+ + RLGH DV L+ +L + +A G + A+
Sbjct: 289 RQGEVFTWGEASGGRLGHGMG-KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGE--- 344
Query: 226 VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y+ G G G LGHG+ P+ I L LQ V+ G WH A++ G++ T+
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTF 403
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDV 332
G G +G LGHG++E P+ V++L+ ++ I VA G + + E G +
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKL 463
Query: 333 YSFGCGESASLGH 345
+++G G+ + LGH
Sbjct: 464 FTWGDGDKSRLGH 476
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG E + PR + SL G+R I A G I
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRL--KPTCVSALIDHTFHRVACGHS 504
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLAL 217
T L+ G+VYT +LG+ PN P L L V +IA G ++ L
Sbjct: 505 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 272
S V++ G G G+LGHG D K P L++ + +++ + AA H
Sbjct: 562 T---SRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKW 618
Query: 273 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 300
V G + C+ + R+ C G C S
Sbjct: 619 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 653
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 23/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEV 488
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L Q+A G+C +
Sbjct: 489 MVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTV 547
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D P +E N + + GA+H AV+
Sbjct: 548 ALTT--SGH-VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 602
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG + ++ P +V+AL D + V G
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 30/284 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I V I+ G + L+ A Q +++ G G G LGHG R PR +E L L
Sbjct: 418 IHVSSISCGPWHTALVTSAGQ-----LFTFGDGSFGVLGHGDRASLSVPREVE--SLKGL 470
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG+++ VP V A
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAA 530
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
L + VA G T ++ G VY+ G LG N ADG
Sbjct: 531 LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NPQADG 573
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 660 SGSDQSMCS 668
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 18/280 (6%)
Query: 84 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G T V+++DG V++FG LGH+ A+ +
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKR 277
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 37/316 (11%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-----GTTEEEWRPRPIRSLQGIRIIQAAAG 103
+AG +S+A+ G ++++G N LGH + E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIG 103
Query: 104 AGRTMLISDAGQVYAFGKDSFG---EAEYGVQGT-----KLVTSPQLVESLKNIFVVQAA 155
+ + D G+ YA+G + +G E GT + + PQ + V Q A
Sbjct: 104 GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQ--RCAPKLVVRQVA 161
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
G + VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 AGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA-- 210
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
LA Q G +++ G G+LG G P ++ L L V +AAG WH+
Sbjct: 211 --FHNLALQEDG-TLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTL--VDIAAGGWHS 265
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 329
+ +G V WG G +G LG G+ + S VP+ VQ L + V+ G + ++ D
Sbjct: 266 TALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRD 325
Query: 330 GDVYSFGCGESASLGH 345
G ++SFG G+ LG+
Sbjct: 326 GHMFSFGRGDHGRLGY 341
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 23/292 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG--- 120
+ ++GS GQLG G+ EE+ +++LQ RI AG+ ++ I+D G+++ +G
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+ + G K +P V++L ++ +VQAAIG + + +GR Y + +
Sbjct: 67 RATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 126
Query: 181 LGHHTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G E D PL +E IP V Q+AAG + + L + V++
Sbjct: 127 CGEEPERKDGTGRPLRRDIE-IPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT---- 178
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G G P ++ + + L +A GA+H + +DG + WG YG LG
Sbjct: 179 WGQPWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLG 234
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+ + S P VQ L+D+ + +A G + + ++++G+VY +G GE LG
Sbjct: 235 TGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLG 286
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G ++++G+N GQLG G T+ +P ++ L + ++ AA
Sbjct: 201 ENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAA 260
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++D G+VY +G+ G +G PQ V+ L +VQ + G +
Sbjct: 261 GGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSV 320
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+G +++F G+ RLG+
Sbjct: 321 ALTRDGHMFSFGRGDHGRLGY 341
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 98
QA G H +AV +G Y++G N GQ G ++ RP+R + +
Sbjct: 99 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVR 158
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
Q AAG +++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 159 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 210
Query: 159 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
F L +G ++ +WGN+ +LG +P + G L ++ +V IAAG + A
Sbjct: 211 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPIRVQG-LSDLTLVDIAAGGWHSTA 267
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
L + VY G G G+LG G +D+ + ++ QLL + +V V+ G H+ +
Sbjct: 268 LTDEGE---VYGWGRGEHGRLGFGD-SDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALT 323
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+DG + ++G G +G LG+G + P V
Sbjct: 324 RDGHMFSFGRGDHGRLGYGRKVTTGQPMEV 353
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ WG G G LG G+ E + +V+AL + V G + +++DG ++++G +
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66
Query: 340 SASLGHNA 347
A+LGH A
Sbjct: 67 RATLGHPA 74
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 402 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHT 461
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + ++ P+ VESL + V A G + TA +
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDREN--ISYPREVESLSGLRTVSVACGVWHTAAIVEV 519
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + +EP + L + +IA G+ +
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEP-TCISALIDYNFHRIACGHSLTVG 578
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+++G + G+LG+ ++D K P L+E +L +A GA+H V+
Sbjct: 579 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 676
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 22/221 (9%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+ +ES + V+Q A G A+++R+G ++T+ + RLGH N V+P L+ L
Sbjct: 333 PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQP-CLVEAL 391
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 255
+ V +A G + A+ MA +Y+ G G G LGHG+ P+ I
Sbjct: 392 ASSTVDFVACGEFHTCAVT-----MAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-P 445
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
L LQ V G WH A++ G++ T+G G +G LGHG+ E S P+ V++L+ ++ +
Sbjct: 446 LEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVS 505
Query: 316 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGH 345
VA G + T + E G ++++G G+ LGH
Sbjct: 506 VACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGH 546
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG E PR + SL G+R + A G T I
Sbjct: 457 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAI 516
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + +L P + +L + + A G+
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL--EPTCISALIDYNFHRIACGHS 574
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ GRV+T +LG+ + P + L V +IA G ++ L
Sbjct: 575 LTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL-PCLVEDKLAGECVEEIACGAYHVTVLT- 632
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 633 --SRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 683
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3021 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3080
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3081 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3138
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 3139 SQGELYTWGLGEYGRLGHGDNVTQLKPK-LVVALAGRRVVQVACGSRDAQTLALTEDG-A 3196
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 3197 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 3254
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3255 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3305
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++S++G+VY G + RLG N
Sbjct: 2998 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV 3056
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 3057 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3114
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 3115 LVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALA 3172
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ + VA G D T ++EDG V+S+G G+ LG
Sbjct: 3173 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3209
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4046 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4105
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4106 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4163
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4164 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4219
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4220 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4277
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + + V G + +++ G VY++G G+ LGH ++
Sbjct: 4278 CKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4327
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3136
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGDNVTQL--KPKLVVALAGRRVVQVACGSRDAQTLALTED 3194
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3195 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3250
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3308
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3309 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3340
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4139 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 4198
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4199 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4256
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + VV++ G + +AL SG AVY
Sbjct: 4257 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQFSVALT--KSG-AVY 4312
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4313 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 4370
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4371 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4091 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4150
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4151 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4208
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4209 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4266
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L + V V G+ + + + G V TWG G + LGH
Sbjct: 4267 YGKLGRGGSDGCKLPYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4324
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 4325 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 4379
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4380 TAIQRPRLVAALQ 4392
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 16/305 (5%)
Query: 45 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ +A A P + T V +G N QLG + P +++ +R I A G+
Sbjct: 2970 HEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS 3025
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTA 162
++S G+VYA G+ + G GV T V P + L V + A+ G
Sbjct: 3026 KSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3083
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L+ +G+V+++ G D +LGH +P L+ L + +A G + A++ Q
Sbjct: 3084 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE 3142
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRV 280
+Y+ G G G+LGHG + P+L+ L + V VA G+ A + +DG V
Sbjct: 3143 ---LYTWGLGEYGRLGHGDNVTQLKPKLV--VALAGRRVVQVACGSRDAQTLALTEDGAV 3197
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
+WG G +G LG G E P ++ L+ + + + G + ++ G+V+++G G+
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257
Query: 341 ASLGH 345
LGH
Sbjct: 3258 YRLGH 3262
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3117 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRV 3176
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 3177 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 3234
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3235 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3293
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ VY+ G G+ G G+ K P L+
Sbjct: 3294 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3326
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I Q A + +++S G++Y + + + EAE P +E + + +
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHEVFISI 616
Query: 155 A---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 617 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 674
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 675 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 731
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 732 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSLALSSEGQ 789
Query: 332 VYSFGCGESASLGHNAIADG-QVCSL-LFLSIFQYLQI 367
+YS+ G++ LGH + Q CS+ +S Q+ +I
Sbjct: 790 LYSW--GKATCLGHQLVERSVQGCSVPRLVSSLQHKRI 825
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + +
Sbjct: 3236 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3295
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3296 TDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 726 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLA 783
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y++GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 784 LSSEGQLYSWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 840
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 212
G V F WG ND++ P V PLL T L ++P + C
Sbjct: 841 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLPTFPASGIAC 884
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 732
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 733 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSLALSSEG 788
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
++Y SWG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 789 QLY--SWGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 839
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 36/321 (11%)
Query: 29 LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP 88
L RF + ACC + + ++ +G +Y++ + E P P
Sbjct: 565 LSCRFQIKQVACCETQ----------MLILSQEGKLYTWR----------LAKPEAEPLP 604
Query: 89 IRSL-QGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ + + I A GR L D+ Y++G +G + V P + +L
Sbjct: 605 MEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV--PTKIAAL 662
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ V G ++A ++ G + T+ G ARLGH + P L+ L + VV
Sbjct: 663 EQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPT-LVVALSDHMVVD 721
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+A G +LA G+ V++ G G GKLG+G+ P L+E + V A
Sbjct: 722 VALGSGDAHSLALTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQR----VFA 776
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYT 322
G+ + + +G++ + WG+ CLGH E SVP++V +L + + VA
Sbjct: 777 GSQFSLALSSEGQL--YSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAH 834
Query: 323 TFVVSEDGDVYSFGCGESASL 343
+S G+V+ +G +S +
Sbjct: 835 CLALSSSGEVFGWGRNDSQQI 855
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 155/308 (50%), Gaps = 18/308 (5%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E + + G + + + GVV S G S G+LG G +++ R I +LQG + Q A
Sbjct: 781 EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATS 840
Query: 104 A---GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
G + +++ G+V+++G +G+ +G + P+ +E+L+ VVQ A G
Sbjct: 841 TGSDGHAIALTENGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGQEVVQVACGFKH 898
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+AV++ +G+++TF +G+ RLGH + N P ++ LEN + Q+A G + + ++
Sbjct: 899 SAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVS-- 955
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ V++ G G GKLG G + + P IE + ++ ++ GA A + DG++
Sbjct: 956 QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKK--ISCGAQFTAALTWDGKL 1013
Query: 281 CTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G R C GN E + P+VV AL+ I ++ G T ++ G VY++G
Sbjct: 1014 FMFGQDRM-C---GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG 1069
Query: 337 CGESASLG 344
LG
Sbjct: 1070 SNTDGQLG 1077
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA +E Q G HS VT G +++FG G+LGHG+T + P + +L+ I
Sbjct: 882 EALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYII 941
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+++S D V+A G +G + G+ GT TSP +E L + + + +
Sbjct: 942 GQVACGLNHTVIVSQDNLTVWACGDGDYG--KLGIGGTSAKTSPTKIEVLSRVGIKKISC 999
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLL 215
G FTA L+ +G+++ F G D G+ +P + T L + ++ I+ G + +
Sbjct: 1000 GAQFTAALTWDGKLFMF--GQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTI 1057
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
AL S VY+ G G+LG G + P L+E N++ ++AG H+A
Sbjct: 1058 ALT---SKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQ--ISAGRTHSA 1109
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 30/338 (8%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
++ + + GH+IA+T G V+S+G G+LGHG ++ + RPR I +L+G ++Q A
Sbjct: 835 KQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVAC 894
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + +++ G+++ FG +G +G K + P+ V +L+N + Q A G T
Sbjct: 895 GFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKI--PERVMALENYIIGQVACGLNHTV 952
Query: 163 VLSREG-RVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
++S++ V+ G+ +LG T P +E L + + +I+ G + A
Sbjct: 953 IVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIE------VLSRVGIKKISCGAQFTAA 1006
Query: 217 LACQPS-GMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L M CG +RT +P+++ ++ + ++ GA H +
Sbjct: 1007 LTWDGKLFMFGQDRMCG-----NCETRTSPSFNPQVVTALSSHHI--IDISVGAEHTIAL 1059
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS---EDGD 331
G V TWG G LG G+ P +V++L+ ++ G + S +D
Sbjct: 1060 TSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDDAG 1119
Query: 332 VYSFGCGESASLGHNAIADGQVCS----LLFLSIFQYL 365
G ES ++ +AD V L+ LS F L
Sbjct: 1120 HTLLGTPESIPSQYDLLADVSVLDARGRLVVLSKFSDL 1157
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 226 VYSVGCGLGGKL---GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
VY G G G+L G G P+L + F + V G ++ +G V +
Sbjct: 752 VYLFGAGRHGQLAEVGSGVLV----PQLTKSFH----EARKVVCGQNCTFIINNNGVVLS 803
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATG-DYTTFVVSEDGDVYSFGCGE 339
G G YG LG GN + + + AL VK + +TG D ++E+G+V+S+G G+
Sbjct: 804 CGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGD 863
Query: 340 SASLGH 345
LGH
Sbjct: 864 YGKLGH 869
>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 529
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 112
HSIA+T+KG ++G+ +LGHG++ +E+ PR I L+ R+ A G G T+ + +
Sbjct: 217 HSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALME 276
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+G+++A+G S G G + + S + ++IF G + LS +GR Y
Sbjct: 277 SGELFAWGNGSNGRLGLGDTNDRPESCSTSVPVRFRHIFC-----GASHSLGLSWDGRAY 331
Query: 172 TFSWGNDARLGH-HTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
T+ N + GH HT ++ E V AAG + L SG VYS
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG-WEHTLFSTASGR-VYSC 389
Query: 230 GCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
GCG LGHG P LI+ + + V VA G H+ V G+V
Sbjct: 390 GCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVY 449
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
TWG G G LGHG+EE P +V+ + G T ++ D +++S G G+S
Sbjct: 450 TWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSG 509
Query: 342 SLGH 345
LGH
Sbjct: 510 RLGH 513
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 24/269 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G GH++A+ G ++++G+ S+G+LG G T + RP + +R GA ++ +
Sbjct: 267 GLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCSTSVPVRFRHIFCGASHSLGL 324
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 166
S G+ Y +GK++ G+ +G + Q +ES ++ V AA G T +
Sbjct: 325 SWDGRAYTWGKNNQGQCGHGHTNDQWTI--QEIESFEDGEEAECVTYAAGGWEHTLFSTA 382
Query: 167 EGRVYTFSWG-NDAR-------LGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLA 216
GRVY+ G D+R LGH ++P L+ +LE+ +V++A G+ + LA
Sbjct: 383 SGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKP-TLIQSLEDAREEIVKVACGWDHSLA 441
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
++ + VY+ G G GKLGHG P L+ + +++ AG H +
Sbjct: 442 VS---ASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKD--AKAGCEHTVFLTY 496
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVV 305
D + + G G G LGHG+ + P +
Sbjct: 497 DHELWSCGQGDSGRLGHGDSQTRKRPTKI 525
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGR 106
G HS+ ++ G Y++G N+ GQ GHG T ++W + I S + + AA G
Sbjct: 317 GASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEH 376
Query: 107 TMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQAAIGN 158
T+ + +G+VY+ G KDS V G P L++SL++ +V+ A G
Sbjct: 377 TLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGW 436
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ +S G+VYT+ G + +LGH E + P L+ T+E V AG + + L
Sbjct: 437 DHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTP-TLVRTMEGRHVKDAKAGCEHTVFLT 495
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
++S G G G+LGHG K P I F
Sbjct: 496 YD---HELWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
R E + G HS+AV++ G VY++GS ++G+LGHG E P +R+++G + A
Sbjct: 426 REEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAK 485
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
AG T+ ++ ++++ G+ G +G T+
Sbjct: 486 AGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTR 519
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 18/280 (6%)
Query: 84 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G T V+++DG V++FG LGH+ A+ +
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKR 277
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 148/265 (55%), Gaps = 13/265 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
+QA G HS+A+T+ G VYS+GSN+ GQLG T T + PR IRS+ +++Q AAG
Sbjct: 403 TQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGH 462
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++++G++YA+G +++G+ G+ K V++P LV+SL + + A G + +
Sbjct: 463 YHCLALTNSGELYAWGSNAYGQLGLGMTNEK-VSTPTLVQSLAGVPIAFIACGGNHSFAV 521
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
S+ G + F WG + +LG + + N + L TL ++ V ++ G + + L +
Sbjct: 522 SKSGAI--FGWGKNTFGQLGLN-DLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLT---A 575
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
G V++ G G G+LGHGS +E PR++ F+L+ + +A G H A V G++
Sbjct: 576 GGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
+G G LG G + P++V+
Sbjct: 634 GFGLSGVGQLGIGIVGNYNTPQIVR 658
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAA 101
+E ++A G H++ +T+ G +YS G+N GQLGH RP+ + +L+ I QA
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQAC 406
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G ++ +++ GQVY++G ++ G+ T+ + P+L+ S+ VVQ A G++
Sbjct: 407 CGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHC 465
Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
L+ G +Y +WG++A +LG V L+ +L +P+ IA G + + A
Sbjct: 466 LALTNSGELY--AWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNH--SFAV 521
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG A++ G G+LG + P + + L ++ V+ G + + G
Sbjct: 522 SKSG-AIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVR--YVSCGDDFSVFLTAGGG 578
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T G G +G LGHG+ E +P++V L K +A G +T V G +Y FG
Sbjct: 579 VFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLS 638
Query: 339 ESASLG 344
LG
Sbjct: 639 GVGQLG 644
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 13/277 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR + + I +AA GA T+L+++ G++Y+ G + G+ + V+ PQL+ +
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLP-NKRPQLLTA 396
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
L+N + QA G + L+ G+VY SWG++A +LG T+ L+ ++
Sbjct: 397 LENYIITQACCGTAHSLALTNWGQVY--SWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQ 454
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 261
VVQIAAG+ + LAL + +Y+ G G+LG G T+EK P L++ L +
Sbjct: 455 VVQIAAGHYHCLALT---NSGELYAWGSNAYGQLGLG-MTNEKVSTPTLVQS--LAGVPI 508
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
+A G H+ V + G + WG +G LG + P ++ L + +V+ GD
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDD 568
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
+ ++ G V++ G G LGH + + + ++F
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF 605
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+V P+ ++ + + +AA G T +L+ +G++Y+ + +LGH E + L
Sbjct: 334 MVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQL 393
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
L LEN + Q G + LAL + VYS G G+LG + T + PRLI
Sbjct: 394 LTALENYIITQACCGTAHSLALT---NWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR-- 448
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA 313
+ Q V +AAG +H + G + WG YG LG G E S P +VQ+L V
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPI 508
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G +F VS+ G ++ +G LG N + Q + L
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQL 552
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTT 323
A GA H ++ DG++ + G +G LGH E + P+++ AL + G +
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
++ G VYS+G LG Q+ L SI
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI 450
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 285 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 325
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 18/280 (6%)
Query: 84 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G T V+++DG V++FG LGH+ A+ +
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKR 277
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 33/323 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA G
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAPQLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGA----FHN 208
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA + G +++ G G+LG G P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGH-NAIADGQVCSL 356
FG G+ LG+ + GQ L
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLEL 348
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 22/289 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G + + TK ++P LV+SL ++ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 184 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
EP+ E P+ + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLG 281
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGH 183
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG G +E + + VV+AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++G LG+GT W P+ I L+G+++ A G T
Sbjct: 297 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 356
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LIS GQ++ FG +FG +G + + ++ P+ V+SL + + A G + TA +
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEV 414
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 415 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 473
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V++VG + G+LG+ D K P L+E +LL VA GA+H V+
Sbjct: 474 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V++L D +A G
Sbjct: 529 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 571
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 21/259 (8%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G+V+ +G+++ G G+ K VT P+LVE+L V A G F T ++
Sbjct: 249 SAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306
Query: 167 EGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +YT+ G N LG+ T+ + P + G LE + V +A G + ++ S
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS---STG 363
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 276
+++ G G G LGHG + +PR ++ L L+ + VA G WH A V +
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDS--LTGLRTIAVACGVWHTAAVVEVIMTQSST 421
Query: 277 ---DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
G++ TWG G LGHG++E P V AL D +A G T ++ G V+
Sbjct: 422 SIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVF 481
Query: 334 SFGCGESASLGHNAIADGQ 352
+ G LG N ADG+
Sbjct: 482 TVGSSVYGQLG-NPHADGK 499
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ ++S G +++FG + G LGHG PR + SL G+R I A G T +
Sbjct: 352 GPWHTALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAV 411
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 412 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 469
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G+V+T +LG + + +P + L ++A G +++ L
Sbjct: 470 ITIGLTTSGQVFTVGSSVYGQLG-NPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT- 527
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ ++A G+ ++A +
Sbjct: 528 --SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 578
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H+A+V + G V TWG G LG G + + P++V+AL VA G++ T V+ D
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307
Query: 330 GDVYSFGCG 338
G++Y++G G
Sbjct: 308 GELYTWGDG 316
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E+++ +A G H + +TSK VY++G ++G+LGHG E+ P + SL+ + A
Sbjct: 511 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570
Query: 103 GAGRTMLI 110
G+ + I
Sbjct: 571 GSNYSAAI 578
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G +S A+T+ G + +G GQLG G E+ PR SL+ +IQ A
Sbjct: 45 SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDR 102
Query: 106 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
T I G++Y + GK G+ E + +V+ P V++L+ V+Q + G++
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ + + T+ G RLG H + D+ L+ +L +P+ +I+ G + L
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y G G GKLG GS D PRL+E L ++Q V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276
Query: 281 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
TWG GR G + +G E PK + L + ++ G+ + +S+ GD+Y++G
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334
Query: 340 SASLGH 345
+ ++GH
Sbjct: 335 TKNIGH 340
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 28/254 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW------RPRPIRSLQGIRIIQAAAGAGRT 107
H+ A+ S G +Y++G + +G+LGHG E +P +++L+G ++IQ + G+ T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++D + +G G +G T+ + +P+L+ESL + + + + G TA+L
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHG--DTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAV 226
G++Y F G +LG + + + P L G LE+I + +++ G + A+ C V
Sbjct: 221 GKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCG----KV 276
Query: 227 YSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQP---VVVAAGAWHAAVVGQDGRV 280
Y+ G GG+LGH G D P+ +L NL+ V ++ G H+ + G +
Sbjct: 277 YT--WGQGGRLGHIFNGPEHDFLSPK-----RLSNLEKAFIVDISCGNSHSVALSDVGDI 329
Query: 281 CTWGWGRYGCLGHG 294
TWG + +GHG
Sbjct: 330 YTWGMTKN--IGHG 341
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 124 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 179
+G EYG G+K + P LV+ L+++ + + + G+ ++A ++ G + + +G
Sbjct: 13 WGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LG + + P L +L+N V+Q+A C A S +Y+ GC GKLGH
Sbjct: 73 QLGFGNLEDCLVPRVNL-SLKN--VIQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126
Query: 240 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G ++ Q + L + V+ V+ G++H + D + TWG G G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ PK++++L + ++ G + T ++ G +Y FG G LG + D +
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPR 246
Query: 356 LL 357
LL
Sbjct: 247 LL 248
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H+ +T ++G G+LGHG T++ + P+ I SL G+ I + + G
Sbjct: 154 QVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHH 213
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 165
T ++ G++Y FG +FG+ +G T V P+L+E L++I + + ++G+ +A ++
Sbjct: 214 TAILLVTGKLYMFGGGAFGKLGFG--STDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVT 271
Query: 166 REGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ G+VYT WG RLGH + +D L LE +V I+ G + +AL+
Sbjct: 272 KCGKVYT--WGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGD- 328
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+Y+ G+ +GHG + HP + + +L + +V
Sbjct: 329 --IYT--WGMTKNIGHGIQG--IHPNMPSKHPILQNKNIV 362
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 145/288 (50%), Gaps = 26/288 (9%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
+L ++G + CR + +AG +++A+ + G V+SFG N G LGHG + E +P+ I
Sbjct: 281 LLGVQISGRSFCR---TPLVAGSRNTMALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRI 337
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLK 147
+L+GIRI+Q A G + +SD G ++A+G + +G+ + G + +T P V+
Sbjct: 338 PALKGIRIVQVAIGGWHCLALSDRGTMFAWGGNEYGQCGSVLPGQRDITEPMPVDLGLGP 397
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
+ V Q + G + L +G V+ + +WG D + P V HP G V
Sbjct: 398 SQRVRQVSAGGMHSLALLEDGMVWQWGENWG-DFSMRPVRTPRPVAVHPDEGG-----VA 451
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV- 264
++ G + LAL Q V S G G+LG+GS T PR + L+++ VVV
Sbjct: 452 AVSCGAFHNLALTAQ---GRVLSWGMNDYGQLGNGSTTYATTPRPV-----LDMEGVVVA 503
Query: 265 --AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQAL 308
AAG WH+ + G V WG G YG LG G+ S P+ V+ L
Sbjct: 504 DIAAGGWHSCALSSAGEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGL 551
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 34/301 (11%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI-------IQAAAGAGRTMLISDA 113
+ VV+ +G + GQLG E P+ + +L G++I AG+ TM + A
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
GQV++FG + G +G + + T P+ + +LK I +VQ AIG + LS G + F
Sbjct: 310 GQVWSFGWNDRGTLGHGHRDVE--TKPKRIPALKGIRIVQVAIGGWHCLALSDRGTM--F 365
Query: 174 SWGND--ARLGH--HTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+WG + + G + + EP P+ LG + V Q++AG + LAL GM
Sbjct: 366 AWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALL--EDGMV--- 420
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAGAWHAAVVGQDGRVCTW 283
G G S + PR + + P V+ GA+H + GRV +W
Sbjct: 421 --WQWGENWGDFSMRPVRTPRPVA------VHPDEGGVAAVSCGAFHNLALTAQGRVLSW 472
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G YG LG+G+ + P+ V + V +A G + + +S G+V+ +G GE L
Sbjct: 473 GMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSAGEVWVWGRGEYGRL 532
Query: 344 G 344
G
Sbjct: 533 G 533
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+T++G V S+G N GQLG+G+T PRP+ ++G+ + AAG + +S A
Sbjct: 459 HNLALTAQGRVLSWGMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSA 518
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G+V+ +G+ +G G + PQ V L++ VVQ
Sbjct: 519 GEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGLESHVVVQ 558
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ---------PVVVAAGAWHA 271
P V+ G G+LG R + P+++E LL +Q P+V AG+ +
Sbjct: 248 PIEAVVFGWGVSEDGQLGVEERENVVAPKVVEA--LLGVQISGRSFCRTPLV--AGSRNT 303
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ G+V ++GW G LGHG+ + E+ PK + AL ++ + VA G + +S+ G
Sbjct: 304 MALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGT 363
Query: 332 VYSFGCGESASLG 344
++++G E G
Sbjct: 364 MFAWGGNEYGQCG 376
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 25/298 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WG++ A G++ +P + G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLT---QDG 255
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++
Sbjct: 256 KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSF 312
Query: 284 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYS 334
G G GC E + +V A L DV+ H+ G Y FV + D S
Sbjct: 313 GRGP-GCASRSPHPGALAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQKDTSS 369
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 18/280 (6%)
Query: 84 WR---PRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
WR PRP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGPRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPL--AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G T V+++DG V++FG LGH+ A+ +
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKR 277
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSN++GQL G+ + ++P I +L+ + ++ +
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG +S+G + G T PQLVE ++ + V Q G+ T
Sbjct: 244 GYKHTAVLTQDGKVFTFGDNSYG--QLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTL 300
Query: 162 AVLSREGRVYTFSWG 176
A + G+V +F G
Sbjct: 301 AYIYTTGQVVSFGRG 315
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 23/288 (7%)
Query: 54 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLI 110
H AVT G +Y++G ++S G LGHG W P+ + L+ +R+ A G T ++
Sbjct: 372 HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 164
+ AGQ++ FG +FG G + SP+ VESLK + V+AA G + TA +
Sbjct: 432 TTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 489
Query: 165 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
G+++T+ G+ RLGH + + P + L + ++A G+ +AL
Sbjct: 490 SSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTVALT 548
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ V+++G + G+LG + D K P ++E +L++ +A GA H A V
Sbjct: 549 TKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVTLKS 603
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG++E + P +V+AL + + +A G T V
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 30/290 (10%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L + A G + ++ G +YT WG+ LGH + + P + G LE
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ V IA G + ++ A Q +++ G G G LGH R PR +E L L
Sbjct: 416 VRVASIACGPWHTAVVTTAGQ-----LFTFGDGTFGVLGHNDRQSAYSPREVES--LKGL 468
Query: 260 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ V A G WH A V + G++ TWG G G LGHG++E VP V A
Sbjct: 469 RTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAA 528
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L D VA G T ++ G+V++ G LG + ADG++ ++
Sbjct: 529 LVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMV 577
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VT+ G +++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G G +G + +LV P V +L + + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ +G V+T +LG + P + G L + V IA G + +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLGDPQADGKL-PGMVEGRLVDAYVEDIACGAHH---VA 597
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
C VY+ G G G+LGHG + D P L+E + ++ + AA H +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657
Query: 274 VGQDGRVCT 282
G D C+
Sbjct: 658 SGADQNACS 666
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G Y+ + SV G GG + D P+ +E +L++Q VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAM----NLDAPLPKALESAIVLDVQ--YVACG 317
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
HAA+V + G V TWG G LGHG + S P++V+AL VA G+Y V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 328 EDGDVYSFGCGESASLG 344
GD+Y++G G + SLG
Sbjct: 378 LSGDLYTWGDG-THSLG 393
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ + ++GIR+ + GA T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHT 409
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 163
+++ AGQ++ FG SFG +G T P+ VE+L+ + + A G + TA
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467
Query: 164 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
LS G ++YT+ G+ RLGH + P + +E + Q+A G
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE-RICQVACGND 526
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+AL + VY++G G+LG + + K P +E ++ N VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V+ V TWG G G LGHG+ + P +V L D + +VA G T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 25/285 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G +L++ G+++++G++S G +GV+ V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G + T ++ G +YT+ G N LGH +E + P + G +E I
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIR 398
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + A S +++ G G G LGHG PR +E L L+
Sbjct: 399 VSYISCGAWH---TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTK 453
Query: 264 VAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
VA G WH A + ++ TWG G G LGHG+ E VP+ V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ + VA G+ T ++ G VY+ G LG +A A+G++
Sbjct: 514 IEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGKL 557
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 145/319 (45%), Gaps = 38/319 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT +G ++S+G S G+LGHG + P+ I +L G + A G T +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLV-ESLKNIFVVQAAIGNFFTAVLSR 166
+ +G +Y +G G YG+ G S PQ V ++ I V + G + TAV++
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTS 414
Query: 167 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 216
G+++TF G+ LGH P +VE TL + ++A G + A
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468
Query: 217 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAG 267
+ PS +Y+ G G G+LGHG + PRL+ + L+ + VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALIEERICQVACG 524
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 326
+ GRV T G YG LG + +P V+ + + VA G Y V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583
Query: 327 SEDGDVYSFGCGESASLGH 345
+ +VY++G G + LGH
Sbjct: 584 TSKNEVYTWGKGLNGQLGH 602
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
+G + S+ D P+ +E +L++ + A G HA +V + G + +WG G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
HG E S PK++ L+ VA G+Y T V+ GD+Y++G G
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDG 369
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G ++A+T+ G VY+ GS + GQLG T + + + + A G+
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ +VY +GK G+ +G + +P +V+ LK+ V A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 21/290 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PRP+ S + I A G L++ G+V+ +G++S G +GV K V P++VES
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--VKDVIQPRMVES 329
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + A G F T ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 330 LAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQ 389
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V + G + A S +++ G G G LGHG R + +P+ +E L L+ +
Sbjct: 390 VTSVTCGPWH---TALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVE--SLSGLRTIA 444
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 445 VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYD 504
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T ++ G V+S G LG N ADG++ L+ +F
Sbjct: 505 FHKVACGHSITVGLTTSGQVFSMGSTVYGQLG-NPSADGKIPCLVEDKLF 553
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHG+ W P+ + L+G+++ G T
Sbjct: 341 GEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHT 400
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ GQ++ FG +FG +G + ++ P+ VESL + + A G + TA +
Sbjct: 401 ALVTSMGQLFTFGDGTFGALGHGDREN--ISYPKEVESLSGLRTIAVACGVWHTAAVVEV 458
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + ++A G+ +
Sbjct: 459 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYDFHKVACGHSITVG 517
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+S+G + G+LG+ S D K P L+E +L V+ GA+H V+
Sbjct: 518 LTT--SGQ-VFSMGSTVYGQLGNPS-ADGKIPCLVED-KLFGESVEEVSCGAYHVVVLTS 572
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E P +V+AL D ++A G +YT +
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAI 622
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 147/307 (47%), Gaps = 29/307 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS A+ G +Y +GSN +LG G ++E E PR + +L+G++I+ + G T
Sbjct: 91 GASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAA 150
Query: 110 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVL 164
+ G++Y++G G G G K +P+L+ +L + + ++ G F T L
Sbjct: 151 VDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVAL 210
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
S++G ++ + G RLG+ P P+ VV IAAG + AL
Sbjct: 211 SKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSFALTDNGE-- 267
Query: 225 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+YS G G+GG L E P L+E F L+++ + AAG HAA V DG
Sbjct: 268 -LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQI--AAGYDHAAAVTDDG 324
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
R+ WG + P + A+N+ K + VA G T +SE+G+V++FG G
Sbjct: 325 RLYMWG-----------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKG 373
Query: 339 ESASLGH 345
S LGH
Sbjct: 374 SSNCLGH 380
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 26/300 (8%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHG--------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
A +++ VY++G+ + GQLGHG EE P+ + + +G I GA +
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
I + G++Y +G + + + G + +++ T P+ VE+LK + +V + G++FTA + +G
Sbjct: 97 AIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADG 155
Query: 169 RVYTFSWGNDA---RLGHHTEPNDVEPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPS 222
++Y++ WG G EP P LL TL + +P++ + G + +AL+
Sbjct: 156 KMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGE 215
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
+++ G G G+LG+G + P IE F N+ V +AAG + + +G + +
Sbjct: 216 ---IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDNGELYS 270
Query: 283 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG LG G ES+P +V+A N + +A G V++DG +Y +G
Sbjct: 271 WGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 19/266 (7%)
Query: 94 GIRIIQAAAGAGRTML---ISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVE 144
G R A + A R+ L S VY +G + G+ + G++ +P+L+E
Sbjct: 19 GCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLE 78
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+ + + G +A + +G++Y + ++LG E +++E P + L+ +
Sbjct: 79 AFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGVK 137
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLN 258
+V ++ G + A+ +YS G G G LGH DE PRL+
Sbjct: 138 IVDVSCGDYFTAAVDADGK---MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQG 194
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ + V G +H + +DG + WG G YG LG+G + VP+ ++ + + +A
Sbjct: 195 VPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 254
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLG 344
G +F ++++G++YS+G LG
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLG 280
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 43 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGI 95
++N +IA G S A+T G +YS+G NS QLG G E P + + G+
Sbjct: 246 KDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGL 305
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ Q AAG ++D G++Y + G+K+ P + ++ +VQ A
Sbjct: 306 SVKQIAAGYDHAAAVTDDGRLYMW-------------GSKIWIEPHEMTAVNEYKMVQVA 352
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +T LS G V+TF G+ LGH N ++P + L ++ + I+ G ++
Sbjct: 353 CGRQYTVALSENGEVFTFGKGSSNCLGHGDRKNQLQP-VQIEALADVNITSISCGDYHMG 411
Query: 216 ALA 218
A+A
Sbjct: 412 AIA 414
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P P+R R++Q A G T LI+D +Y FG G +G + + T P V
Sbjct: 1240 PPPLR-----RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTE--EDCTDPIPVGY 1292
Query: 146 LKNIF---------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
++ VV + G T V++ G +Y F WG RLG T +P
Sbjct: 1293 FTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLG--TGETGSSLYPSR 1350
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L NI V A G + LAL S V++ G G GG+LG+GS TDE+ P L+E +
Sbjct: 1351 VDLRNIAAV--ACGREHTLALT---SKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEE 1405
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--------- 307
++ V +AAG H+ + +DG V TWG+G G LGHG + +P +V
Sbjct: 1406 YSI--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVET 1463
Query: 308 -LNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++D+ + VA G Y T + DG +Y +G + LG
Sbjct: 1464 LIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLG 1502
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 31/347 (8%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI---RSL---QGIR 96
R Q G H+ +T +Y+FG G+LGHGT E+ P P+ SL +G+
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVE 1303
Query: 97 ---IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
++ + G TM+++ G +Y FG G G G+ L P V+ L+NI V
Sbjct: 1304 FGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLY--PSRVD-LRNIAAV- 1359
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G T L+ +GRV+ F G RLG+ +E ++ P L+ LE +V IAAG C+
Sbjct: 1360 -ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPF-LVEGLEEYSIVAIAAGECH 1417
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV--------V 264
AL+ V + G G G LGHG+R + P L++ + N++ ++ V
Sbjct: 1418 SCALS---RDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSV 1474
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGD 320
A G++H DG + WG G LG + + + PK ++ +A G
Sbjct: 1475 ACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGT 1534
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
+T+ V S G ++ +G + + + D V + L F++ QI
Sbjct: 1535 FTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKRVGVLGEFEFSQI 1581
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ V S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 2950 IAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3009
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3010 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3067
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3068 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALCGSRVIQVACGSRDAQTLALTEDG-A 3125
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 3126 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 3183
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3234
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ V+S++G+V+ G + RLG N
Sbjct: 2927 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNV 2985
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 2986 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3043
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ + A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 3044 LVEALRAKKIRDI--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALC 3101
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 3102 GSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3138
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4071 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4130
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ +G VY + G D +
Sbjct: 4131 SGGRLGVGGSDSWSI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGK 4188
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P LL L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4189 LGHGNRLSYDRPK-LLEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 4244
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4245 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4302
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4303 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4352
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3006 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAA 3065
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L V+Q A G + T L+ +
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVTALCGSRVIQVACGSRDAQTLALTED 3123
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3124 GAVFSWGDGDFGKLGRGGSEGSATPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3179
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3180 TWGKGDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3237
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3238 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3269
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T+ G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4164 SGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAA 4223
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4224 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4281
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4282 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4337
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4338 TWGKGDFHRLGHGSVDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDAGEVYTWGDND 4395
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4396 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 149/322 (46%), Gaps = 13/322 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4107 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGG 4166
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ G+VYA+G+ G+ +G + + P+L+E L + V A G+ +A +
Sbjct: 4167 KHCLALTTDGEVYAWGEGEDGKLGHGNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAI 4224
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4225 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4282
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4283 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4340
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4341 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4400
Query: 345 HNAIADGQVCSLLFLSIFQYLQ 366
DG V ++ + LQ
Sbjct: 4401 -----DGTVTAIQRPRLVAALQ 4417
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I A G+ ++S G+V+A G+
Sbjct: 2913 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEG 2972
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 2973 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3030
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3031 LGHGNRTTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3086
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3087 DNATQLKPKLVTA--LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3144
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L+ + + + G + ++ G+V+++G G+ LGH
Sbjct: 3145 SATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3191
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---------SPQLVESLKNIFVVQAAI 156
RT+L + +VYA G + + + G ++ P L+ V Q A
Sbjct: 547 RTLL--EQQRVYALGWPTLSKEQQGFNVEPALSWTSASTQRPPPALLNC--KFHVKQVAC 602
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 215
+LS+EG++Y + H D EP PL G + + + IA+ +C
Sbjct: 603 SKDIVLLLSKEGKLYNW----------HISKPDTEPQPLDFGDIGSETFISIAS-HCEGR 651
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ YS G G +LGHG + P IE L + V G ++A +
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIES---LVRRVKSVYCGCSYSAAIT 708
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVY 333
G + TWG G YG LGHG + + +P +V AL D + + VA +GD T ++ +G VY
Sbjct: 709 LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768
Query: 334 SFGCGESASLGHNAIADGQVCSLLF 358
++G G+ LG NA + + LL
Sbjct: 769 AWGDGDYGKLG-NASCNSSLQPLLI 792
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E+ RR S G +S A+T +G +Y++G + G+LGHG ++++ P + +L+ ++
Sbjct: 688 ESLVRRVKS-VYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQV 746
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A G+G T+ +++ G VYA+G +G + G P L+E L + V A
Sbjct: 747 VDVALGSGDAHTLCLTNEGLVYAWGDGDYG--KLGNASCNSSLQPLLIECLPRVQRVFA- 803
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
G+ F+ L+ EG++Y SWG + LGH +V+ P L+ +L++ +V +A G
Sbjct: 804 -GSQFSLALTGEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVDVAVGV 859
Query: 212 CYLLALA 218
+ LAL+
Sbjct: 860 THCLALS 866
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +AV + YS+G+ + +LGHG P I SL R+ G + I+
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLR 710
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G +Y +G+ ++G +G+ + + P +V +LK+ VV A+ G+ T L+ EG VY
Sbjct: 711 GNLYTWGRGNYGRLGHGISDDQCL--PTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
+ G+ +LG+ + + ++ PLL +E +P VQ + AG + LAL + +
Sbjct: 769 AWGDGDYGKLGNASCNSSLQ--PLL--IECLPRVQRVFAGSQFSLALTGEGQLYSWGKAS 824
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
C LG +L + PRLI Q + + V VA G H + G + +GWGR
Sbjct: 825 C-LGHQLVERNVQGCSVPRLITSLQ--HKRIVDVAVGVTHCLALSSAGEI--FGWGR 876
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3161 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3220
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3221 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3270
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
LV +K+++ G ++A ++ G +YT+ GN RLGH + P ++ L++
Sbjct: 690 LVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLP-TMVMALKD 743
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
VV +A G L G+ VY+ G G GKLG+ S P LIE +
Sbjct: 744 HQVVDVALGSGDAHTLCLTNEGL-VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ--- 799
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIHVA 317
V AG+ + + +G++ + WG+ CLGH N + SVP+++ +L + + VA
Sbjct: 800 -RVFAGSQFSLALTGEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVA 856
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
G +S G+++ +G + + I VCS
Sbjct: 857 VGVTHCLALSSAGEIFGWGRND-----NQQICPASVCS 889
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 39/301 (12%)
Query: 79 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
T+ RP P + Q A +L+S G++Y + +K T
Sbjct: 579 TSASTQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNW------------HISKPDT 626
Query: 139 SPQLVE-----SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVE 191
PQ ++ S I + G F AV + +SWG ++ RLGH D
Sbjct: 627 EPQPLDFGDIGSETFISIASHCEGRHFLAV---DNNFNAYSWGTGDNRRLGH----GDCH 679
Query: 192 PHPLLGTLENIPVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
L +E++ V ++ + YC Y A+ + + +Y+ G G G+LGHG D+ P
Sbjct: 680 SRELPTKIESL-VRRVKSVYCGCSYSAAITLRGN---LYTWGRGNYGRLGHGISDDQCLP 735
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
++ + + V + +G H + +G V WG G YG LG+ + P +++ L
Sbjct: 736 TMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL 795
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QVCSL-LFLSIFQYLQ 366
V+ V G + ++ +G +YS+ G+++ LGH + Q CS+ ++ Q+ +
Sbjct: 796 PRVQ--RVFAGSQFSLALTGEGQLYSW--GKASCLGHQLVERNVQGCSVPRLITSLQHKR 851
Query: 367 I 367
I
Sbjct: 852 I 852
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 96
C + AG S+A+T +G +YS+G S LGH E + PR I SLQ R
Sbjct: 794 CLPRVQRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 851
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNI 149
I+ A G + +S AG+++ +G++ + +E ++ LVT P L S
Sbjct: 852 IVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILVTLPTLPASGMAC 911
Query: 150 FVVQAAI 156
VQ+ I
Sbjct: 912 TAVQSLI 918
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 28/303 (9%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V S G + +GQLGH + +E P I L G RIIQ +G ++ +S G VY++G+
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62
Query: 124 -----FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G+ G V P L++SL++ +++ A GNF + L+ G+VY WG
Sbjct: 63 EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVY--EWGQL 120
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG-MAVYSVGCGLGGK- 236
RL D++ L I + ++++ +++ SG Y G K
Sbjct: 121 HRLDESQSSLDIQSTNGL-----IEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKD 175
Query: 237 ------LGHGSRTDEKHP-RLIEQFQLLNLQ------PVVVAAGAW-HAAVVGQDGRVCT 282
+ +++ KH ++I+ Q + +Q VV +G W +A V + GR+ T
Sbjct: 176 DDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYT 235
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG+ G LG GN S P++V+ L DV + V G +++ G+VYS+G G
Sbjct: 236 WGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQ 295
Query: 343 LGH 345
LGH
Sbjct: 296 LGH 298
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 159/331 (48%), Gaps = 50/331 (15%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQL----GHGTTEEEW---RPRPIRSLQGIRIIQ 99
Q ++G HS+AV+ G VYS+G + GQL G+G +++ +P I+SLQ RII+
Sbjct: 38 QTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIK 97
Query: 100 AAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAA 155
A G ++ ++D G+VY +G + ++ +Q T L+ P+L +++A+
Sbjct: 98 VACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQR----IIEAS 153
Query: 156 IGNFFTAVLSREGRVYTFSWGNDAR------------------LGHHTEPNDVEPHPLLG 197
+ + LS E + Y + G + LG + N P
Sbjct: 154 VSQY----LSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQ--- 206
Query: 198 TLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+++IP VV ++ G+ + + A SG +Y+ G G+LG G+R P+L++
Sbjct: 207 -IQDIPEEVVDVSGGWAF--SAAVTKSG-RLYTWGFNEKGQLGLGNRWFHSTPQLVK--T 260
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 313
L+++ V V G H + G V +WG G +G LGHGN + PK +Q ++ +
Sbjct: 261 LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERI 320
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VA G T V S G +Y+FG GE LG
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQLG 351
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 57/333 (17%)
Query: 51 GPGHSIAVTSKGVVYSFG---------SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
G HS+A+T G VY +G S+ Q +G E PR L RII+A+
Sbjct: 101 GNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIE---MPR----LSSQRIIEAS 153
Query: 102 AG---AGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-----KLV----TSPQLVESLKNI 149
+G G D EA Q K++ T P ++ +
Sbjct: 154 VSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE- 212
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPV 204
VV + G F+A +++ GR+YT+ + +LG H+ P L+ TL ++ +
Sbjct: 213 EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQ------LVKTLIDVNI 266
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V + G ++ A+ Q VYS G G+ G+LGHG+ HP+ I+QF LN + V
Sbjct: 267 VSVVCGRQHICAITDQGE---VYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQV 323
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDV 311
A G+ V G + +G G YG LG EE + S+P VV++L
Sbjct: 324 ACGSNFTMVRSVQGLLYAFGHGEYGQLG-STEETQHLDFGGRDNHFKYSIPIVVKSLETK 382
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
K +VA G T VV+++ +VY +G G S +LG
Sbjct: 383 KIKNVACGHLHTIVVTDENEVYQWGWGSSGALG 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++ + G + ++ +G++Y +G + G+ G+ ++PQLV++L ++ +V
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQL--GLGNRWFHSTPQLVKTLIDVNIVSVVC 271
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLL 215
G ++ +G VY++ G +LGH + + P + +E N + Q+A G + +
Sbjct: 272 GRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTM 331
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-------EKH-----PRLIEQFQLLNLQPVV 263
+ Q G+ +Y+ G G G+LG T + H P +++ + ++ V
Sbjct: 332 VRSVQ--GL-LYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNV- 387
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
A G H VV + V WGWG G LG GN+ + VP+++ +L+ + + G+ T
Sbjct: 388 -ACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHT 446
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
VV DV SF + + AD
Sbjct: 447 IVV-RCSDVTSFAYDYKSLINEKKYAD 472
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGAG 105
+ G H A+T +G VYS+G GQLGHG + P+ I+ + RI Q A G+
Sbjct: 269 VVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSN 328
Query: 106 RTMLISDAGQVYAFGKDSFGE---------AEYGVQGTKLVTS-PQLVESLKNIFVVQAA 155
TM+ S G +YAFG +G+ ++G + S P +V+SL+ + A
Sbjct: 329 FTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVA 388
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+ T V++ E VY + WG+ LG + + P L+ +L + I AG + +
Sbjct: 389 CGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQ-LITSLSGEEIASITAGEKHTI 447
Query: 216 ALAC 219
+ C
Sbjct: 448 VVRC 451
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S AVT G +Y++G N GQLG G P+ +++L + I+ G I
Sbjct: 220 GWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAI 279
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSREG 168
+D G+VY++G FG+ +G K P+ ++ N + Q A G+ FT V S +G
Sbjct: 280 TDQGEVYSWGLGVFGQLGHG--NVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQG 337
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----------PHPL-LGTLENIPVVQIAAGYCYLLAL 217
+Y F G +LG E ++ P+ + +LE + +A G+ + + +
Sbjct: 338 LLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+ VY G G G LG G++ + P+LI L + + AG H VV
Sbjct: 398 TDENE---VYQWGWGSSGALGLGNKRFQLVPQLIT--SLSGEEIASITAGEKHTIVV 449
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M+V SVG G+LGH S + P +IE LL + + +G H+ V + G V +W
Sbjct: 1 MSVLSVGQSKNGQLGHDSIKECLEPTVIE--GLLGKRIIQTVSGEAHSLAVSRFGDVYSW 58
Query: 284 GWGRYGCLGH-----GNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G + G LG G+++ V P ++++L + I VA G++ + +++ G VY +G
Sbjct: 59 GRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------------PRPIRS 91
+Q G ++ + +G++Y+FG GQL G+TEE P ++S
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQL--GSTEETQHLDFGGRDNHFKYSIPIVVKS 378
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L+ +I A G T++++D +VY +G S G G + +LV PQL+ SL +
Sbjct: 379 LETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLV--PQLITSLSGEEI 436
Query: 152 VQAAIGNFFTAVLSREGRVYTFSW 175
G T V+ R V +F++
Sbjct: 437 ASITAGEKHTIVV-RCSDVTSFAY 459
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGS 4075
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G++++F G+ RLG N P + LE V Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPE-RVSALEGHQVGQVACGLNHTLAVSA--DG 4190
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGNVYTF 4248
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V AL V VA G T +S GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308
Query: 344 G 344
G
Sbjct: 4309 G 4309
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 336 EEVCRMASDYSRTCASPDSIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 395
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E + I
Sbjct: 396 SFSDAQTIEA--GQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIK 453
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 454 KVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 513
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A++ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 514 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 566
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 567 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 626
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 627 TGQVYAWGCG 636
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 23/312 (7%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 399 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 458
Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 459 KGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 516
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 517 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 572
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 573 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 629
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-- 336
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 630 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNN 687
Query: 337 ----CGESASLG 344
CG+ S G
Sbjct: 688 SMGQCGQGNSTG 699
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
AG ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 357 AGEAAMVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 412
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH ++ + + + G+
Sbjct: 413 ISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----T 465
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 466 LAFTSEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSE 523
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 524 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 581
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 582 GGGDNGKLGH 591
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G ++SFG+ G+LG G T + P + +L+G ++
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQV 4173
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V L + + +A
Sbjct: 4232 GTQFSVALTKDGNVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALTGVFIEDVAV 4283
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + L L+ S VY+ G G+LG G + P LI Q N+Q ++AG
Sbjct: 4284 GAEHTLTLS---STGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQ--ISAGRC 4338
Query: 270 HAA 272
H+A
Sbjct: 4339 HSA 4341
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4077 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG-RVY 171
G++++FG +G G K + P+ V +L+ V Q A G T +S +G V+
Sbjct: 4137 DGKLFSFGNGDYGRLGLGNTSNKKL--PERVSALEGHQVGQVACGLNHTLAVSADGMTVW 4194
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGNVYTFGQ 4250
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + + ++ V V GA H + G V WG G L
Sbjct: 4251 DRLIGLPEGRARNHNRPQQVPALTGVFIEDVAV--GAEHTLTLSSTGDVYAWGSNSEGQL 4308
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P ++ AL ++ G
Sbjct: 4309 GLGHTNHVREPTLISALQGKNIQQISAG 4336
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 564 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 623
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 624 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 677
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 678 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALPR 733
Query: 223 GMAV 226
V
Sbjct: 734 DRQV 737
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +NI V Q G T V+ G V G+ RLG +D+
Sbjct: 3994 QLAEAGRNILVPTLAPSFSQAQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNS-DDL 4052
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4053 HVLTVISALQGFVVTQMVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4107
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ ++G G YG LG GN + +P+ V
Sbjct: 4108 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERV 4165
Query: 306 QALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4166 SALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG 4205
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G G G+L R + P L F Q V G V+ +G V G
Sbjct: 3984 VFLWGAGRHGQLAEAGR-NILVPTLAPSFS----QAQQVVCGQNCTFVIQANGTVSACGE 4038
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSEDGDVYSFGCGESAS 342
G YG LG GN + V V+ AL + T D + ++E G+V+S+G G+
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098
Query: 343 LGH 345
LGH
Sbjct: 4099 LGH 4101
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 138/278 (49%), Gaps = 11/278 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 228 SVGCGLG-GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWQVFRDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDN 4282
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P++V AL K VA G T
Sbjct: 4283 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 8/276 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L I VV +AAG + AC + +++ G G G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACITAAGDLFTWGKGRYGRLGH 4130
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
VP + +L + + V G + +++ G VY++
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTW 4226
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 158/326 (48%), Gaps = 12/326 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALT 4218
Query: 276 QDGRVCTWGWGR-YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V TW R Y LGHG+++ P+ VQ L K I +ATG +EDG+VY+
Sbjct: 4219 KSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4278
Query: 335 FGCGESASLGH---NAIADGQVCSLL 357
+G + LG NAI ++ + L
Sbjct: 4279 WGDNDEGQLGDGTTNAIQRPRLVAAL 4304
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + ++Q A R +++S G+VY A+ D+ G PQLV+SL +
Sbjct: 449 LANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLVQSLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A LS G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VY++G G++ LGH
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH 692
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS LG P+ ++SL I++ AA + + +S
Sbjct: 465 LILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIVKIAAHSDGHHYLALSAN 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+V+++G G +G T + P+++ +L VV A G+ ++A ++ EG
Sbjct: 515 GEVFSWGCGDGGRLGHG--DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + + P + G L+ + V+ ++ G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V TWG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDI--VKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ P E L N+ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLALT 726
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3284
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 163 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 221 ------------------------PSGMA------VYSVGCGLGGK-------------- 236
P+ + + V GGK
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068
Query: 237 -------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
LGHG+R+ PR+IE + ++ V VAAG H+A + G + TWG GRYG
Sbjct: 4069 GEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGHG+ E + PK+V+AL + I +A +GD T +++D V+S+G G+ LG
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L N+ VVQ+A L L+ VY+ +D P+L++ N
Sbjct: 449 LANLGVVQVACAEKRFLILS---RNGRVYT----------QAYNSDTLGPQLVQSLASRN 495
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA----I 314
+ + + H + +G V +WG G G LGHG+ PK++ AL+ +A +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVV 555
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 137/286 (47%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G ++ +G N GQLG + +P +L R IQ G ++ G+V+A G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ GV GT+ V+ P +ES++++F+ + A+ G LS EG VY++ G D
Sbjct: 4521 GAG--GRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDG 4578
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P ++ +L VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4579 KLGHGNRSPCDRPR-VIDSLRGKEVVDIAAGGAHS---ACITANGELYTWGKGRYGRLGH 4634
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E + + + +G + D V +WG G YG LG G +
Sbjct: 4635 GDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4694
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP ++ L + V G + +++ G VY++G G+ LGH
Sbjct: 4695 KVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGH 4740
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQG--IRIIQAAAG 103
Q + G VT +G VY+ G ++G+LG G TT PR I SL I+ + +G
Sbjct: 3501 QIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSG 3560
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ G+V+++G+ G+ + + P+L+E+LK+ V A G+ +A
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIACGSSHSAA 3618
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ G +YT+ G RLGH ++P + L + VVQ+A G LA G
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQV-KALAHERVVQVACGSRDAQTLALTDEG 3677
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VYS G G GKLG G P +++ L + + + GA + + + G+V TW
Sbjct: 3678 -KVYSWGDGDFGKLGRGGSEGCNVPHEVDR--LRDQKVCQIECGAQFSLALTKSGQVWTW 3734
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G Y LGHG + P++V+ L K +HVA G V++ G V+++G +
Sbjct: 3735 GKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQ 3794
Query: 344 GHNAIADGQVCSLLFLSIFQYLQI 367
G+ + +L+ L ++ ++
Sbjct: 3795 GNGTTTVNRKPALVVLEGYKISKV 3818
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 11/290 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P +L +R +Q G+ ++ G+VYA G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ T V+ P+ + SL + + A+ G + L+ +G+V+++ G+D +L
Sbjct: 3526 NGRLGLGIT-TGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + N +P L+ L++ V IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3585 GHFSRWNCDKPR-LIEALKSKRVRDIACGSSHSAAIT---SNGDLYTWGLGEYGRLGHGD 3640
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 299
T + P+ ++ L + + V VA G+ A + +G+V +WG G +G LG G E
Sbjct: 3641 NTTQLKPKQVK--ALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGC 3698
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+VP V L D K + G + +++ G V+++G G+ LGH A
Sbjct: 3699 NVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDA 3748
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 10/309 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++++G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4555 SGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSAC 4614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +GK +G +G ++ P+LVE+LK+ VV A G+ T ++ +
Sbjct: 4615 ITANGELYTWGKGRYGRLGHG--DSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDD 4672
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P + TL+ V+++ G + +AL SG +VY
Sbjct: 4673 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IETLQGQGVMKVECGSQFSVALT--KSG-SVY 4728
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + PR + Q N + + VA G+ H G V +WG
Sbjct: 4729 TWGKGDYHRLGHGSDDHVRRPRKVSALQ--NKKVIDVACGSLHCVACTDTGEVFSWGDND 4786
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G P++V +L K VA G + S + V + + +N
Sbjct: 4787 EGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSAGKLPSDIPMEYNH 4846
Query: 348 IADGQVCSL 356
+ + + +L
Sbjct: 4847 LQNIPITAL 4855
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + G AVT++G V++ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 4498 QLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGG 4557
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G+VY++G+ G+ +G + P++++SL+ VV A G +A +
Sbjct: 4558 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRVIDSLRGKEVVDIAAGGAHSACI 4615
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G RLGH + P L+ L++ VV +A G L C
Sbjct: 4616 TANGELYTWGKGRYGRLGHGDSEDQPRPK-LVEALKSYRVVDMACGSGDAQTL-CITDDD 4673
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE Q + + V G+ + + + G V TWG
Sbjct: 4674 NVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGV--MKVECGSQFSVALTKSGSVYTWG 4731
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG+++ P+ V AL + K I VA G ++ G+V+S+G + LG
Sbjct: 4732 KGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791
Query: 345 H---NAIADGQVCSLLF 358
NAI ++ + L
Sbjct: 4792 DGTTNAIQRPRLVASLL 4808
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 10/204 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S+A+TS G VYS+G + G+LGHG++E++ P ++ +G RI+ A G+G +T+
Sbjct: 679 GSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTL 738
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D+G VY++G +G + G G +P+++E L VV+ GN F+ L++ G
Sbjct: 739 AVTDSGAVYSWGDGDYG--KLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSG 796
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VYT+ G++ RLGH TE D HP + L + V IA G + +A+ +Y
Sbjct: 797 AVYTWGKGDNYRLGHGTE--DHARHPKQIEALSSKKVKDIAIGSLHCMAIT---EDGELY 851
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLI 251
G G+LG+ S ++ P LI
Sbjct: 852 GWGRNEQGQLGNPSISNFTEPTLI 875
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
IRI G L SD G+V+++G G+ +G P L+ L V +
Sbjct: 620 IRIASHPDGKHYMGLTSD-GEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKI 676
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G+ ++ L+ G VY++ GN RLGH + + P LL + +V +A G
Sbjct: 677 CCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDA 735
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LA SG AVYS G G GKLG G K P++IE+ L+ V V G + +
Sbjct: 736 QTLAVTDSG-AVYSWGDGDYGKLGRGGNDGCKTPKVIEK--LMGQDVVRVYCGNQFSMAL 792
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V TWG G LGHG E+ PK ++AL+ K +A G ++EDG++Y
Sbjct: 793 TKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYG 852
Query: 335 FGCGESASLGHNAIAD 350
+G E LG+ +I++
Sbjct: 853 WGRNEQGQLGNPSISN 868
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H + +TS G V+S+G+ G+LGHG + P I L G ++ + G+ ++ ++
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G+VY++GK +FG +G ++ T+P L++ K +V A G+ T ++ G VY
Sbjct: 690 GEVYSWGKGNFGRLGHG--SSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LG P ++ L VV++ G + +AL SG AVY+ G
Sbjct: 748 SWGDGDYGKLGRGGNDGCKTPK-VIEKLMGQDVVRVYCGNQFSMALT--KSG-AVYTWGK 803
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHG+ +HP+ IE ++ +A G+ H + +DG + WG G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSKKVKD--IAIGSLHCMAITEDGELYGWGRNEQGQL 861
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G+ + + P ++ + I VA G TF
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTF 894
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + DG V +WG G G LGHG+ + P ++ L+ + + G + ++ +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLL 357
G+VYS+G G LGH + D LL
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLL 717
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G H +A+T G +Y +G N GQLG+ + P I ++G I
Sbjct: 824 EALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNI 883
Query: 98 IQAAAGAGRTMLISDAGQ 115
I A G +T + GQ
Sbjct: 884 IGVACGPTQTFAWTSGGQ 901
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + + G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 1870 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 1929
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L++ + A G+ +A +S
Sbjct: 1930 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 1987
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G +
Sbjct: 1988 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-S 2045
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 2103
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 2154
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++ + G+VY G + RLG N
Sbjct: 1847 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNV 1905
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 1906 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 1963
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 1964 LVETLRSKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALA 2021
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 2022 GRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG 2058
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 2978 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 3037
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 3038 SGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 3095
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 3096 LGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHG 3151
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 3152 DSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3209
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++ G+ LGH ++
Sbjct: 3210 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSV 3259
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 1926 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAA 1985
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L V+Q A G + T L+ +
Sbjct: 1986 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVAALAGRRVIQVACGSRDAQTLALTED 2043
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 2044 GSVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 2099
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 2100 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 2157
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 2158 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2189
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 3071 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAA 3130
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L PQLVE+L + A G + T ++ +
Sbjct: 3131 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPQLVEALLGYRAIDIACGSGDAQTLCITDD 3188
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 3189 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 3244
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 3245 TWSKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 3302
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 3303 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I A G+ ++ G+VYA G+
Sbjct: 1833 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 1892
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 1893 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 1950
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ TL + + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 1951 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 2006
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 2007 DNATQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEG 2064
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 2065 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 2111
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G + P + SLQ + + + A +G + ++
Sbjct: 3023 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 3082
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 3083 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTW 3140
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 3141 GKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 3198
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L + + V G+ + + + G V TW G + LGH
Sbjct: 3199 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWSKGDFHRLGH 3256
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 3257 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 3311
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 3312 TAIQRPRLVAALQ 3324
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + ++DAG
Sbjct: 2089 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAG 2148
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
QVYA+G + G + G T + P LV L +FV + A G+
Sbjct: 2149 QVYAWGDNDHG--QQGSGNTFVNKKPALVIGLDAVFVNRVACGS 2190
>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 371
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 127/274 (46%), Gaps = 17/274 (6%)
Query: 16 RQDLKQKCGGSWKLVLRFLL-----AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSN 70
R L ++CGGSWK VLRFL +G + Q G H++ V VYS GS+
Sbjct: 70 RGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGRYHTLLVHDSS-VYSCGSS 128
Query: 71 SSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTMLISDAGQVYAFGKDS---FGE 126
G LGHG + S + +I +A + ++G+V+ G +S G
Sbjct: 129 LCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVFTCGDNSSLCCGH 188
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
E G + + P VE+LK I Q A G FT +L+R+G+VYT +LGH
Sbjct: 189 GEVG----RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDT 244
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ P + + PVVQIAAG Y A+ V+S G LGHG + DE
Sbjct: 245 IDRATPKLIELFEGSTPVVQIAAGASYTFAVT---DDGTVHSFGSCTNFCLGHGDQHDEL 301
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
PR I+ F+ N+ V V+AG HA + G V
Sbjct: 302 LPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYV 335
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 197 GTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
GT+E +Q+A G + L + +VYS G L G LGHG D +
Sbjct: 96 GTVETTSGSMQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVS 149
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 312
+L V+ ++A HAA V + G V T G C GHG E ++ P V+AL +
Sbjct: 150 FPSLSCVINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIP 208
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
VATG T +++ DG VY+ G LGH D L+ L
Sbjct: 209 CKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIEL 255
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYT 322
VA G ++ +DG+V T G +G LGHG+ + PK+++ + +A G
Sbjct: 212 VATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASY 271
Query: 323 TFVVSEDGDVYSFGCGESASLGH 345
TF V++DG V+SFG + LGH
Sbjct: 272 TFAVTDDGTVHSFGSCTNFCLGH 294
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--GIRIIQAAAGA 104
Q AG ++ AVT G V+SFGS ++ LGHG +E PR I+S + I +++ +AG
Sbjct: 264 QIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKWRNIHVVRVSAGD 323
Query: 105 GRTMLISDAGQVYAFGKDSFGEA 127
+ + G V+ G+ E+
Sbjct: 324 EHAVALDALGYVWCSGERYLTES 346
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 138/285 (48%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVE+
Sbjct: 269 PRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGV--GKNVVQPRLVEA 326
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + V A G F + ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 327 LTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL- 385
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
QIA C A S +++ G G G LGHG R + +PR +E LL L+ +
Sbjct: 386 --QIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 VACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSN 501
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T +++ G V++ G LG N +DG+V L+
Sbjct: 502 FHKIACGHSLTAGLTKSGRVFTMGSTVYGQLG-NPQSDGKVPCLV 545
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 149/284 (52%), Gaps = 24/284 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y++G ++++G LGHG+ W P+ I L+G++I A G T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHT 397
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
L++ GQ++ FG +FG +G + + V+ P+ VESL + + A G + TA +
Sbjct: 398 ALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEV 455
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+
Sbjct: 456 IATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVAALIDSNFHKIACGHSLTAG 514
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ ++D K P L+ ++ +++ + A GA+H AV+
Sbjct: 515 LT--KSGR-VFTMGSTVYGQLGN-PQSDGKVPCLVGDKIARESIEEI--ACGAYHVAVLT 568
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 569 SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 393 GPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVAALIDSNFHKIACGHS 510
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
TA L++ GRV+T +LG+ V P + + + +IA G ++ L
Sbjct: 511 LTAGLTKSGRVFTMGSTVYGQLGNPQSDGKV-PCLVGDKIARESIEEIACGAYHVAVLT- 568
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
R D PR +E +L++ + A G HA++V + G V TWG GCLGHG +
Sbjct: 263 RADVLLPRPLESSVVLDVHHI--ACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQ 320
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGH 345
P++V+AL VA G++ + V+ G++Y++G G + LGH
Sbjct: 321 PRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGH 366
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ R + G H +TSK VY++G ++G+LGHG E+ P + +L+
Sbjct: 544 LVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKD 603
Query: 95 IRIIQAAAGAGRTMLI 110
+ A G+ + I
Sbjct: 604 RHVKYIACGSNYSAAI 619
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVE+
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV--GKNVVQPRLVEA 326
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L + + A G F + ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 327 LISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQ 386
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+ +A G + + S +++ G G G LGHG R + +PR +E LL L+ +
Sbjct: 387 IAFVACGPWHTALIT---STGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYN 501
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG ++++DG+V L+
Sbjct: 502 FHKIACGHSLTVGLTTSGRVFTMGSTVYGQLG-SSLSDGKVPCLV 545
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y++G +++G LGHG+ W P+ I L+G++I A G T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHT 397
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + + V+ P+ VESL + + A G + TA +
Sbjct: 398 ALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEV 455
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 456 IATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVSALIDYNFHKIACGHSLTVG 514
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+++G + G+LG S +D K P L+ ++ +A GA+H AV+
Sbjct: 515 LTT--SGR-VFTMGSTVYGQLG-SSLSDGKVPCLVGD-KIAGESIEEIACGAYHVAVLTS 569
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 393 GPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVSALIDYNFHKIACGHS 510
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ GRV+T +LG V P + + + +IA G ++ L
Sbjct: 511 LTVGLTTSGRVFTMGSTVYGQLGSSLSDGKV-PCLVGDKIAGESIEEIACGAYHVAVLT- 568
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 13/297 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 108
AG + AV S G V + G S G+LG+G + P I +R I + G+ G +M
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSM 227
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
I GQ++ +G +G+ +G T+ SP+L+E+L + +V A G+ +A + G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + G+ RLG P + E Q+ G+ + + L+ G V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLGHG + P++I+ Q L + +AAG +A V ++G + WG+G
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTI--TQIAAGTQISAAVTREGALYVWGFGP- 397
Query: 289 GCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
CLG+G+ +E +PKVV+ L+ I +A G+ +++DG V+++G ++ G
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCG 453
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+ G ++++G G+LGHG + + P+ I +L I+ A G + + D
Sbjct: 224 GHSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCD 283
Query: 113 AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR- 169
AG +Y +G+ +G G +Q + V P + E+ Q G T VLS +GR
Sbjct: 284 AGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRT 337
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V++F + +LGH P ++ L+ + + QIAAG + A + + V+
Sbjct: 338 VWSFGAAENGKLGHGDTNRQFRPK-IIDALQGLTITQIAAG-TQISAAVTREGALYVW-- 393
Query: 230 GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G LG+GS +DE P+++ L + +A G H + +DG V TWG +
Sbjct: 394 --GFGPCLGNGS-SDETFMLPKVVR--GLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQ 448
Query: 288 YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVS 327
G G G+ + P++VQ L+ V G TFV S
Sbjct: 449 NGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWS 489
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 19/280 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V+ +GSNSS QL T E++ PR + S+ G +++ AG T + G V A GK
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSITAGQYCTFAVLSNGTVMANGKG 188
Query: 123 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
S+G G + +SP L+E ++ I + + G+ + + + G+++T+ G+
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SMAIGKNGQIWTWGDGDYG 244
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P L+ L + +V G+ + A+ C + Y G G G+LG
Sbjct: 245 KLGHGDSTTQKSPK-LIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 298
G P + + + V G H V+ DGR V ++G G LGHG+
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ PK++ AL + +A G + V+ +G +Y +G G
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFG 396
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTW 283
+++ G G GKLGHG T +K P+LIE V+V A G H+A V G + W
Sbjct: 235 IWTWGDGDYGKLGHGDSTTQKSPKLIEALA----SRVIVDADCGHRHSAAVCDAGHLYMW 290
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 342
G G YG LG G+ SVP VQ + +A V G T V+S DG V+SFG E+
Sbjct: 291 GEGDYGRLGLGDALQRSVP--VQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGK 348
Query: 343 LGH 345
LGH
Sbjct: 349 LGH 351
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAG-YCYLLALACQPSGMAVY 227
F WG+++ + D P L N+ V+ I AG YC L S V
Sbjct: 132 FCWGSNSS----QQLTDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVL----SNGTVM 183
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G G+LG+G+ P LIE F + + H+ +G++G++ TWG G
Sbjct: 184 ANGKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGD 242
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LGHG+ + PK+++AL + G + V + G +Y +G G+ LG
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG 299
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA R A G HS AV G +Y +G G+LG G + R P++
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318
Query: 98 IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q G T+++S G+ V++FG G+ +G T P+++++L+ + + Q A
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G +A ++REG +Y WG LG+ + ++ L V+ IA G +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVA 434
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L G+ V++ G G+ G GS P++++ +Q V AG H V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A+T G+V+++G+N +GQ G G+ + P+ ++ L G I Q AG T +
Sbjct: 428 GENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Query: 110 ISDA 113
S A
Sbjct: 488 WSAA 491
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 16/299 (5%)
Query: 64 VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y++G + +LG GT ++ +P I+ + I Q A G G T+++ + G +++FG +
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+G+ G + + + + + SL N + A G + +A L G V+T+ G + RLG
Sbjct: 72 QYGQLGNGTKVDSPLDASRDISSLSNKLIA-VACGRYHSAALDVNGTVFTWGGGKNGRLG 130
Query: 183 HHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
H ND + + + ++P +I GY A+ + +Y+ G G G+LG GS
Sbjct: 131 H----NDEQTRTIPCRITHLPRAHKIFCGYHITAAI----TDDGLYTWGWGEHGQLGQGS 182
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECES 300
D P+ + F NL +A G H V + G V TWG +G LG G E S
Sbjct: 183 LEDSYGPKKV-IFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS 241
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
P ++ +L + VA GD + V+ G ++++GCG GH D C + FL
Sbjct: 242 SPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND---CDMPFL 297
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 12/317 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGA 104
Q G GH++ + G ++SFG N GQLG+GT + R I SL ++I A G
Sbjct: 48 QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGR 106
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ + G V+ +G G + + T+ + P + L + G TA +
Sbjct: 107 YHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTI--PCRITHLPRAHKI--FCGYHITAAI 162
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +YT+ WG +LG + + P ++ N+ + Q+A G + L +
Sbjct: 163 TDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLV---RTESG 218
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VY+ G G+LG G R +E + + L + VAAG H+A V G + TWG
Sbjct: 219 DVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWG 277
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G GHG+ +P +V++L V + V G T +S+D D+Y FG LG
Sbjct: 278 CGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337
Query: 345 HNAIADGQVCSLLFLSI 361
+ + LF SI
Sbjct: 338 DGSKSSCCTPRKLFFSI 354
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
SQ G H + T G VY++GSN GQLG G E + P + SL G+ + AAG
Sbjct: 202 SQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGD 261
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G ++ +G + G+ +G P LVESL +F+++ G+ FT L
Sbjct: 262 RHSAAVTNTGSLFTWGCGAEGQCGHGDYND--CDMPFLVESLVGVFILKVFCGHNFTVAL 319
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
S++ +Y F + +LG ++ + P L ++ + +C L
Sbjct: 320 SKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDITCGHFHCTL 369
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H IA++S+G VYS+G G+LGHG RP+ I L G+ I+ A G +
Sbjct: 21 SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 80
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G+ T ++ +
Sbjct: 81 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 138
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+++ G+ +LG +D PL + +L + VV++ G + +AL SG AV
Sbjct: 139 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 193
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 194 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 251
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 252 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 292
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P + S+Q + I + A +G + +S G VY++G+ G+ +G + + P+L+
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLI 60
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
E L + +V A G +A ++ G +YT+ G RLGH + + P ++ L++
Sbjct: 61 EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYK 119
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ +A G L C V+S G G GKLG G K P I+ L L V
Sbjct: 120 VIDVACGSGDAQTL-CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDS--LAGLGVVK 176
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V G+ + + + G V TWG G Y LGHG ++ P+ V AL K I +ATG
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236
Query: 324 FVVSEDGDVYSFGCGESASLG 344
S+ G+V+++G + LG
Sbjct: 237 VACSDKGEVFTWGDNDEGQLG 257
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Query: 140 PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P L+ES++++F+ + A+ G LS EG VY++ G+D +LGH + + P L+
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPK-LIE 61
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L + +V IA G + A+ S +Y+ G G G+LGHG D+ P+++E Q
Sbjct: 62 DLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ V +G V D V +WG G YG LG G + VP + +L + + V
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE 178
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGH 345
G + ++ G VY++G G+ LGH
Sbjct: 179 CGSQFSVALTRSGAVYTWGKGDYHRLGH 206
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 231 TGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 290
Query: 110 ISDA 113
S A
Sbjct: 291 WSTA 294
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 18/292 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+S+A+ + G V++ GSNS+GQLG+GTT PRP+ L R + AAG + +
Sbjct: 131 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 188
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + +G + G T +P V L+ + V A G + L +G V+ +
Sbjct: 189 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 244
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ + +LG+ T + P P+ G + VV +AAG + LAL + V++ G
Sbjct: 245 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 298
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG T P +E + + V VA G +H+ V G + +WG G LG+
Sbjct: 299 FGQLGEAVSTQRTKPGRVEGLREV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 354
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G+ + P VQ L V + VA G + V DG V+++G E LGH
Sbjct: 355 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH 404
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 22/299 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ + G V+++G+N GQLG+G+T P + LQG+ + A G ++
Sbjct: 177 AGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHSLA 234
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G V SP V VV A G F + L +G
Sbjct: 235 LCADGTVWAWGFNDYGQLGNGTT----VHSPTPVPVPGLSQVVSVAAGGFHSLALCADGT 290
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN+ +LG +P + G E VV +A G+ + LA+ +G +++
Sbjct: 291 VW--AWGNNGFGQLGEAVSTQRTKPGRVEGLRE---VVAVAGGFYHSLAVR---AGGSLW 342
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G+LG+GS + P ++ + VAAG H+ V DG V WG
Sbjct: 343 SWGNNYSGQLGNGSFSSSARPAPVQGLGAV----TSVAAGGMHSVAVQADGTVWAWGRNE 398
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LGH + P V L + VA G Y + V G ++++G + LG +
Sbjct: 399 EGQLGHERAPERATPVRVPGLQG--EVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDS 455
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ + G V+++G N GQLG+GTT P P+ L +++ AAG ++ +
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 288
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + FG+ V + T P VE L+ + V G F+ ++ R G +
Sbjct: 289 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 342
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWGN+ +LG+ + + P P+ G V +AAG + ++A Q G V++ G
Sbjct: 343 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 396
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LGH E+ P ++ LQ V VAAG +H+ V G + WG +G
Sbjct: 397 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 451
Query: 291 LGHGNEECESVP 302
LG VP
Sbjct: 452 LGDSEAPLMPVP 463
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 22/299 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ + G ++ G G ++ P +G+R + A G ++ +
Sbjct: 81 HGMALRASGGGWTLRGLGEGAGGGEASKHRATPAQAADQRGVRAV--AGGYQYSLALHAD 138
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A G +S G+ G T ++P+ V L V A G L +G V+
Sbjct: 139 GTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV--AAGGSHALALCADGTVW-- 192
Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WGN+ +LG+ + + P + G L+ VV +A GY + LAL + V++ G
Sbjct: 193 AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGGYMHSLALCADGT---VWAWGF 246
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG+G+ P + Q V VAAG +H+ + DG V WG +G L
Sbjct: 247 NDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFHSLALCADGTVWAWGNNGFGQL 302
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G + P V+ L +V + VA G Y + V G ++S+G S LG+ + +
Sbjct: 303 GEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS 359
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV + G ++S+G+N SGQLG+G+ RP P++ L + + AAG ++ +
Sbjct: 331 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 388
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G++ E + G + +P V L+ V A F LS + +
Sbjct: 389 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 442
Query: 174 SWG-ND-ARLGHHTEPNDVEPHP 194
+WG ND +LG P P P
Sbjct: 443 AWGLNDFGQLGDSEAPLMPVPAP 465
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G +S A+T+ G + +G GQLG G E+ PR SL+ ++Q A
Sbjct: 45 SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDR 102
Query: 106 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
T I G++Y + GK G+ E + +V+ P V++L+ V+Q + G++
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ + + T+ G RLG H + D+ L+ +L +P+ +I+ G + L
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+Y G G GKLG GS D PRL+E L ++Q V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276
Query: 281 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
TWG GR G + +G E PK + L + ++ G+ + +S+ GD+Y++G
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334
Query: 340 SASLGH 345
+ ++GH
Sbjct: 335 TKNIGH 340
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 28/254 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW------RPRPIRSLQGIRIIQAAAGAGRT 107
H+ A+ S G +Y++G + +G+LGHG E +P +++L+G ++IQ + G+ T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++D + +G G +G T+ + +P+L+ESL + + + + G TA+L
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHG--DTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAV 226
G++Y F G +LG + + + P L G LE+I + +++ G + A+ C V
Sbjct: 221 GKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCG----KV 276
Query: 227 YSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQP---VVVAAGAWHAAVVGQDGRV 280
Y+ G GG+LGH G D P+ +L NL+ V ++ G H+ + G +
Sbjct: 277 YT--WGQGGRLGHIFNGPEHDFLSPK-----RLSNLEKAFIVDISCGNSHSVALSDVGDI 329
Query: 281 CTWGWGRYGCLGHG 294
TWG + +GHG
Sbjct: 330 YTWGMTKN--IGHG 341
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 124 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 179
+G +EYG G+K + P LV+ L+++ + + + G+ ++A ++ G + + +G
Sbjct: 13 WGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LG + + P L +L+N VVQ+A C A S +Y+ GC GKLGH
Sbjct: 73 QLGFGNLEDCLVPRVNL-SLKN--VVQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126
Query: 240 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G ++ Q + L + V+ V+ G++H + D + TWG G G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ PK++++L + ++ G + T ++ G +Y FG G LG + D +
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPR 246
Query: 356 LL 357
LL
Sbjct: 247 LL 248
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H+ +T ++G G+LGHG T++ + P+ I SL G+ I + + G
Sbjct: 154 QVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHH 213
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 165
T ++ G++Y FG +FG+ +G T V P+L+E L++I + + ++G+ +A ++
Sbjct: 214 TAILLVTGKLYMFGGGAFGKLGFG--STDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVT 271
Query: 166 REGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ G+VYT WG RLGH + +D L LE +V I+ G + +AL+
Sbjct: 272 KCGKVYT--WGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGD- 328
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+Y+ G+ +GHG + HP + + +L + +V
Sbjct: 329 --IYT--WGMTKNIGHGIQG--IHPNMPSKHPILQNKNIV 362
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 18/292 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+S+A+ + G V++ GSNS+GQLG+GTT PRP+ L R + AAG + +
Sbjct: 134 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 191
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + +G + G T +P V L+ + V A G + L +G V+ +
Sbjct: 192 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 247
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ + +LG+ T + P P+ G + VV +AAG + LAL + V++ G
Sbjct: 248 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 301
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG T P +E + + V VA G +H+ V G + +WG G LG+
Sbjct: 302 FGQLGEAVSTQRTKPGRVEGLREV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 357
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G+ + P VQ L V + VA G + V DG V+++G E LGH
Sbjct: 358 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH 407
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 22/299 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ + G V+++G+N GQLG+G+T P + LQG+ + A G ++
Sbjct: 180 AGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHSLA 237
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G V SP V VV A G F + L +G
Sbjct: 238 LCADGTVWAWGFNDYGQLGNGTT----VHSPTPVPVPGLSQVVSVAAGGFHSLALCADGT 293
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN+ +LG +P + G E VV +A G+ + LA+ +G +++
Sbjct: 294 VW--AWGNNGFGQLGEAVSTQRTKPGRVEGLRE---VVAVAGGFYHSLAVR---AGGSLW 345
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G+LG+GS + P ++ + VAAG H+ V DG V WG
Sbjct: 346 SWGNNYSGQLGNGSFSSSARPAPVQGLGAV----TSVAAGGMHSVAVQADGTVWAWGRNE 401
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LGH + P V L + VA G Y + V G ++++G + LG +
Sbjct: 402 EGQLGHERAPERATPVRVPGLQG--EVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDS 458
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ + G V+++G N GQLG+GTT P P+ L +++ AAG ++ +
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 291
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + FG+ V + T P VE L+ + V G F+ ++ R G +
Sbjct: 292 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 345
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWGN+ +LG+ + + P P+ G V +AAG + ++A Q G V++ G
Sbjct: 346 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 399
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LGH E+ P ++ LQ V VAAG +H+ V G + WG +G
Sbjct: 400 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 454
Query: 291 LGHGNEECESVP 302
LG VP
Sbjct: 455 LGDSEAPLMPVP 466
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 22/299 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ + G ++ G G ++ P +G+R + A G ++ +
Sbjct: 84 HGMALRASGGGWTLRGLGEGAGGGEASKHRATPAQAADQRGVRAV--AGGYQYSLALHAD 141
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A G +S G+ G T ++P+ V L V A G L +G V+
Sbjct: 142 GTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV--AAGGSHALALCADGTVW-- 195
Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WGN+ +LG+ + + P + G L+ VV +A GY + LAL + V++ G
Sbjct: 196 AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGGYMHSLALCADGT---VWAWGF 249
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG+G+ P + Q V VAAG +H+ + DG V WG +G L
Sbjct: 250 NDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFHSLALCADGTVWAWGNNGFGQL 305
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G + P V+ L +V + VA G Y + V G ++S+G S LG+ + +
Sbjct: 306 GEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS 362
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV + G ++S+G+N SGQLG+G+ RP P++ L + + AAG ++ +
Sbjct: 334 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 391
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G++ E + G + +P V L+ V A F LS + +
Sbjct: 392 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 445
Query: 174 SWG-ND-ARLGHHTEPNDVEPHP 194
+WG ND +LG P P P
Sbjct: 446 AWGLNDFGQLGDSEAPLMPVPAP 468
>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
Length = 484
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 159/360 (44%), Gaps = 59/360 (16%)
Query: 23 CGGS-WKLVLRFLLAGEACCRRENSQAIAGPG--------------------HSIAVTSK 61
CGG+ W L+ R L A Q + GP HSI +T
Sbjct: 72 CGGTNWDLIGRNQLPKNATGSANRGQNLWGPHRYGSMSGVRVRSVISGPTSVHSILITED 131
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G S+G N GQLGHG T+ P I SL G I++AA G T+ ++D G+V+AFG+
Sbjct: 132 GKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAACGRNHTLCLTDDGKVFAFGE 191
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+ G+ G + + + Q+V + VV+ A G F+ V+ G +Y+F +L
Sbjct: 192 NKMGQLGLGNENAAVPSPTQIVYT--GPPVVKVACGAEFSMVIDCRGALYSFGCPEYGQL 249
Query: 182 GHHTEPN----------DVEPHP-------------LLGTLENIPVVQIAAGYCYLLALA 218
G++T+ D E P + + N+ +V I G + +AL
Sbjct: 250 GNNTDGQYFVTSNKMAYDCELVPRRISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALD 309
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
Q V++ G G G+LGH + DE PRL++ F + AGA+++ + +G
Sbjct: 310 KQ---KRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFDYPGRGARTIYAGAFYSMGIMDNG 366
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ WG+ G N PK VQ L+ DV+++ + + VV+ D S+G
Sbjct: 367 GQL-YLWGQTKTTGEAN----MYPKPVQDLSGWDVRSVGCSN---RSIVVAADESTISWG 418
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G++ + V + +G + ++ G A+ S G G+LGHG P +I
Sbjct: 102 PH-RYGSMSGVRVRSVISGPTSVHSILITEDGKAM-SWGRNDKGQLGHGDTKRVDVPTVI 159
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-ND 310
E N+ V A G H + DG+V +G + G LG GNE +VP Q +
Sbjct: 160 ESLAGFNI--VEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNENA-AVPSPTQIVYTG 216
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ VA G + V+ G +YSFGC E LG+N DGQ
Sbjct: 217 PPVVKVACGAEFSMVIDCRGALYSFGCPEYGQLGNN--TDGQ 256
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 52 PGHSIAVTSKGVVYSFG-SNSSGQL-----GHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
PG G YS G ++ GQL T E P+P++ L G +++ +
Sbjct: 345 PGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKTTGEANMYPKPVQDLSGWD-VRSVGCSN 403
Query: 106 RTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
R+++++ ++G ++GE YG K T P+ V++L I++ + + G T +
Sbjct: 404 RSIVVAADESTISWGPSPTYGELGYGENKAKSSTIPKEVKTLDGIYIHKVSCGYGHTIFI 463
Query: 165 SR 166
+R
Sbjct: 464 AR 465
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 27/351 (7%)
Query: 16 RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
++L CG S K V L+ L G+ + C E Q I + +
Sbjct: 2 EEELPLFCGDSDKSVQATVPSLKMLDVGKWPIFSLCSEEELQVIRQACVFGSAGNEVLYT 61
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T ++ G+N SG LG G + PR + SL +I + G+G +L + G+V+
Sbjct: 62 TVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVF 121
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
++G +++G+ G LV S + +L N V + A G++ + VL+ +G V+ + + N
Sbjct: 122 SWGHNAYGQLGNGTINHGLVPS-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + G L+N VV IA G + ++A +G VY G G+L
Sbjct: 181 SGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQL 237
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D + I +T+ ++ G VY +G C G+S +L H
Sbjct: 296 NQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTLPH 346
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V +WG
Sbjct: 67 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGP-HIVLATTEGEVFSWGH 125
Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG+G VP + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 12/210 (5%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEP-NDVEPHPL 195
+P+ +E+L I V Q A G+ T VLS++G+VYT WG ++R LG E + +
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYT--WGQNSRGQLGLGKEGCSSISSPQC 169
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ +L ++PVVQ++AG + AL+ SG +V+ G G+LG G TD + P L+
Sbjct: 170 VRSLSSMPVVQVSAGGDHSFALSV--SG-SVFGWGRNDCGQLGLGDTTDRETPTLV---H 223
Query: 256 LLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LN++ V AA G H AV+ DG V T+G G YG LGH + P++V L K
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+A G Y T V+++ VYSFGC E LG
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRPIRSLQGIRIIQAAAG 103
+Q G H++ ++ G VY++G NS GQLG G P+ +RSL + ++Q +AG
Sbjct: 125 TQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAG 184
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ +S +G V+ +G++ G + G+ T +P LV L V AA G TAV
Sbjct: 185 GDHSFALSVSGSVFGWGRNDCG--QLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAV 242
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+ +G V+TF G+ +LGH++ N + P L+ L V +IA G + L L
Sbjct: 243 LTMDGTVFTFGSGHYGQLGHNSFRNALCPR-LVAELWGAKVTKIACGRYHTLVLT---DH 298
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
M VYS GC G+LG +E HP + QL P++
Sbjct: 299 MKVYSFGCNEHGQLGP---REETHPCVPLPVQLPREGPII 335
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
+ PR + +L GI + Q A G+ T+++S GQVY +G++S G+ G +G ++SPQ V
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENI 202
SL ++ VVQ + G + LS G V F WG ND + D E L+ L
Sbjct: 171 RSLSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V A G + L + V++ G G G+LGH S + PRL+ +L +
Sbjct: 229 KTVFAACGKDHTAVLTMDGT---VFTFGSGHYGQLGHNSFRNALCPRLVA--ELWGAKVT 283
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G +H V+ +V ++G +G LG E VP VQ
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQ 327
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 35 LAGEACCRRENS----QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
++ C R +S Q AG HS A++ G V+ +G N GQLG G T + P +
Sbjct: 164 ISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH 223
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
L + + AA G T +++ G V+ FG +G + G + P+LV L
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYG--QLGHNSFRNALCPRLVAELWGAK 281
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
V + A G + T VL+ +VY+F +LG E + P P+ E + I AG
Sbjct: 282 VTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQNIFAG 341
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 192 PHPL-----LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TD 244
PHP L L I V Q+A G + + L+ VY+ G G+LG G +
Sbjct: 107 PHPPFTPRSLEALSGITVTQVACGSQHTVVLS---KDGQVYTWGQNSRGQLGLGKEGCSS 163
Query: 245 EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESV 301
P+ + L+ PVV V+AG H+ + G V +GWGR C LG G+
Sbjct: 164 ISSPQCVRS---LSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRET 218
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
P +V LN K + A G T V++ DG V++FG G LGHN+ +
Sbjct: 219 PTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNA 268
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 137/287 (47%), Gaps = 25/287 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PRP+ S + + A G +++ G+V+ +G++S G +GV K V P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L V A G F T ++ G +YT WG+ LGH T+ + P + G LE
Sbjct: 329 LAMTTVDFIACGEFHTCAVTMAGEIYT--WGDGMHYAGLLGHGTDISHWIPKRISGPLEG 386
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ Q+A+ C A S +++ G G G LGHG+R + +P+ +E L L+
Sbjct: 387 L---QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVE--SLAGLRT 441
Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 501
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N ADG+V L+
Sbjct: 502 FNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPYADGKVPCLV 547
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + +G LGHGT W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ GQ++ FG +FG +G + + P+ VESL + + A G + TA +
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGNREN--IAYPKEVESLAGLRTIAVACGVWHTAAVVEV 457
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 458 IVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDFNFHKIACGHSLTVG 516
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+++G + G+LG+ D K P L+E +L +A GA+H AV+
Sbjct: 517 LTT--SGH-VFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACG 614
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG E P+ + SL G+R I A G T +
Sbjct: 395 GPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAV 454
Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDFNFHKIACGHS 512
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G V+T +LG+ V P + L V +IA G ++ L
Sbjct: 513 LTVGLTTSGHVFTMGSTVYGQLGNPYADGKV-PCLVEDKLSGESVEEIACGAYHVAVLT- 570
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ +A GA ++A +
Sbjct: 571 --SRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVK--YIACGANYSAAI 621
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G V+S+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 396 SGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSAC 455
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G+++ +GK +G +G ++ P+LVE+LK + V+ A G+ T ++ +
Sbjct: 456 ITSTGELFTWGKGRYGRLGHGDSEDQM--KPKLVEALKGVRVIDVACGSGDAQTLCITDD 513
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
V+++ G+ +LG P VE L+G VV++ G + +AL S
Sbjct: 514 DSVWSWGDGDYGKLGRGGSDGCKIPQKVE--ALIGQ----GVVKVECGSQFSVALT--KS 565
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G VY+ G G +LGHGS + PR + Q N+ + +A G+ H G V T
Sbjct: 566 G-CVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNV--ISIATGSLHCVACTDQGEVFT 622
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG G LG G+ P++V AL K VA G
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACG 659
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 14/288 (4%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G ++ +G N GQLG + P P +L +R +Q G +T+ VYA G
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGE-QTLF-----AVYATGY 361
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
+ G+ GT+ V+SP L+ES++++ + + A+ G LS EG V+++ D
Sbjct: 362 GA--GGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDG 419
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH N + ++ +L VV IAAG + AC S +++ G G G+LGH
Sbjct: 420 KLGHGNR-NSCDRPRVIESLRGKEVVDIAAGGAHS---ACITSTGELFTWGKGRYGRLGH 475
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+L+E + + + V +G + D V +WG G YG LG G +
Sbjct: 476 GDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 535
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+P+ V+AL + V G + +++ G VY++G G+ LGH +
Sbjct: 536 KIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGS 583
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 145/288 (50%), Gaps = 8/288 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGK 121
VY+ G + G+LG G TE P + S+Q + I + A +G + +S G+V+++G+
Sbjct: 356 VYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGE 415
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G+ +G + + P+++ESL+ VV A G +A ++ G ++T+ G RL
Sbjct: 416 AEDGKLGHGNRNS--CDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRL 473
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + ++P L+ L+ + V+ +A G L C +V+S G G GKLG G
Sbjct: 474 GHGDSEDQMKPK-LVEALKGVRVIDVACGSGDAQTL-CITDDDSVWSWGDGDYGKLGRGG 531
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
K P+ +E L+ V V G+ + + + G V TWG G Y LGHG+++
Sbjct: 532 SDGCKIPQKVEA--LIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRR 589
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
P+ V AL I +ATG ++ G+V+++G + LG + +
Sbjct: 590 PRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTS 637
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 98/249 (39%), Gaps = 79/249 (31%)
Query: 164 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 212
LSR +T SWG ++ H + VE P P L + VQ+ G
Sbjct: 293 LSRRPDDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVKLPTPC-DALAALRPVQLIGGEQ 351
Query: 213 YLLALACQPSGMAVYSVG---------------------------------CGLGGK--- 236
L A VY+ G GGK
Sbjct: 352 TLFA---------VYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCL 402
Query: 237 ------------------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
LGHG+R PR+IE L + V +AAG H+A + G
Sbjct: 403 ALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIE--SLRGKEVVDIAAGGAHSACITSTG 460
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFG 336
+ TWG GRYG LGHG+ E + PK+V+AL V+ I VA +GD T +++D V+S+G
Sbjct: 461 ELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWG 520
Query: 337 CGESASLGH 345
G+ LG
Sbjct: 521 DGDYGKLGR 529
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+N +IA G H +A T +G V+++G N GQLG G+T RPR + +LQG +I + A
Sbjct: 599 KNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVAC 658
Query: 103 GAGRTMLISDAGQVYA 118
G+ ++ S + V A
Sbjct: 659 GSAHSLAWSTSKPVNA 674
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 149/301 (49%), Gaps = 27/301 (8%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTE--------EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
++++ V+++G+ + GQLGHG+ E EE PR + + +G I + GA +
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I G++Y +G + + + +G + + P++V++L+ I +V + G + T + EG+
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120
Query: 170 VYTFSWGNDAR-----LGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPS 222
++T+ WG LGH ++ P L+ TL + +PV + G + +AL
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPR-LVRTLVDQGVPVKSVECGELHTVALTKDGE 179
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
+++ G G G+LG+G+ + + P +E F N+ ++AG + + G V +
Sbjct: 180 ---IWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIAS--ISAGRDFTFAITEHGEVYS 234
Query: 283 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG + LG G E++P VV+AL++V V+ G V+ DG ++ +G
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294
Query: 337 C 337
Sbjct: 295 A 295
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 31/327 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTM 108
G HS A+ +G +Y++GSN QLGHG++ ++ + PR + +L+GI+I+ + G T
Sbjct: 54 GATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTG 113
Query: 109 LISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAV 163
+ + G+++ + G G G G + + P+LV +L + + V G T
Sbjct: 114 AVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVA 173
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+++G ++ + G RLG+ N P P+ + + I+AG + A+
Sbjct: 174 LTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFADENIASISAGRDFTFAITEHGE- 231
Query: 224 MAVYSVGC------GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
VYS G GLGG L E P ++E L N+ V+AG HAA V D
Sbjct: 232 --VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVE--ALSNVNVAQVSAGYDHAAAVTND 287
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ WG + P + L D I V G Y T +S G++++FG
Sbjct: 288 GKMFMWG-----------AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGK 336
Query: 338 GESASLGHNAIADGQVCSLLFLSIFQY 364
G S LGH Q+ LL S+ +Y
Sbjct: 337 GHSNCLGHGE-RKTQLQPLLVESLNRY 362
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++ + SP+++E+ + + + G +A + +EG++YT+ +LGH + D
Sbjct: 27 GIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQD 86
Query: 190 VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG-----GKLGHGSRT 243
++ P ++ L I +V I+ G + A+ + +++ G G G LGH
Sbjct: 87 IQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK---LFTWGWGGSTMKGSGALGHAGGE 143
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
DE PRL+ + V G H + +DG + WG G YG LG+G + VP+
Sbjct: 144 DESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPE 203
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
V+ D ++ G TF ++E G+VYS+G + LG
Sbjct: 204 PVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLG 244
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+T G ++++G+ G+LG+G ++ P P+ I +AG T I++
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229
Query: 114 GQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
G+VY++G +S + G V + T P +VE+L N+ V Q + G A ++ +G+
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGK 289
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+ F WG A+L +EPH + L++ ++ + G Y AL+ + +++
Sbjct: 290 M--FMWG--AKLW-------LEPHEMT-ILKDETIISVQCGRYYTAALSASGN---LFTF 334
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
G G LGHG R + P L+E N+
Sbjct: 335 GKGHSNCLGHGERKTQLQPLLVESLNRYNV 364
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 226 VYSVGCGLGGKLGHGS--------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
V++ G G G+LGHGS +E PR++E F+ N+ + GA H+A + ++
Sbjct: 7 VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDF--GATHSAAIDKE 64
Query: 278 GRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G++ TWG Y LGHG N++ +S+P+VV AL +K + ++ G+Y T V E+G ++++
Sbjct: 65 GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTW 124
Query: 336 GCGESASLGHNAI 348
G G S G A+
Sbjct: 125 GWGGSTMKGSGAL 137
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 164 LSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+S + V+T+ G +LGH + ++ P +L T E + ++ G +
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPR-ILETFEGKNIAKLDFGATHSA 59
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAV 273
A+ + +Y+ G +LGHGS + PR+++ L ++ V ++ G +H
Sbjct: 60 AIDKEGK---LYTWGSNEYHQLGHGSSNQDIQSIPRVVDA--LRGIKIVDISCGEYHTGA 114
Query: 274 VGQDGRVCTWGWGRY-----GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVV 326
V ++G++ TWGWG G LGH E ES+P++V+ L D V V G+ T +
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQV 353
++DG+++++G GE LG+ A + +V
Sbjct: 175 TKDGEIWAWGNGEYGRLGNGASDNFEV 201
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 44 ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGIR 96
EN +I AG + A+T G VYS+G NS QLG G E P + +L +
Sbjct: 211 ENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVN 270
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ Q +AG +++ G+++ + G KL P + LK+ ++
Sbjct: 271 VAQVSAGYDHAAAVTNDGKMFMW-------------GAKLWLEPHEMTILKDETIISVQC 317
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G ++TA LS G ++TF G+ LGH ++P L+ +L VV + GY ++ A
Sbjct: 318 GRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQP-LLVESLNRYNVVSMTCGYSHMGA 376
Query: 217 LACQPSGMAV 226
L +P AV
Sbjct: 377 L-TKPFAEAV 385
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++++G++S G +GV V PQL+E+
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPQLIEA 363
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 364 LSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 423
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + ++ S +++ G G G LGHG R PR +E L L+ V
Sbjct: 424 VSSISCGPWHTAVVS---SAGQLFTFGDGTFGVLGHGDRKSISLPREVE--SLKGLRTVQ 478
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG++E + VP V AL +
Sbjct: 479 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEP 538
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VA G T + G VY+ G LG N +DG++
Sbjct: 539 NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLG-NPQSDGKL 579
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 72/346 (20%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q IA G H+ VT +G ++S+G S G+LGHG + P+ I +L I A G
Sbjct: 318 QNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEY 377
Query: 106 RTMLISDAGQVYAFGKD------------------------------------------- 122
T ++ +G +Y +G
Sbjct: 378 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 437
Query: 123 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 164
+FG+ +GV G K ++ P+ VESLK + VQAA G + TA +
Sbjct: 438 SSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNS 497
Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G+++T+ G+ RLGH + + P + L Q+A G+ L +A
Sbjct: 498 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVSALVEPNFCQVACGHS--LTIART 554
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
SG VY++G + G+LG+ ++D K P +E +L +A GA+H AV+ V
Sbjct: 555 TSGH-VYTMGSPVYGQLGN-PQSDGKLPARVEG-KLSRSSVEEIACGAYHVAVLTSKTEV 611
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
TWG G G LGHG+ + +++P +V+AL D + +A G T +
Sbjct: 612 YTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAI 657
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 130/313 (41%), Gaps = 35/313 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ V+S G +++FG + G LGHG + PR + SL+G+R +QAA G T +
Sbjct: 430 GPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAV 489
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVSALVEPNFCQVACGH 547
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T + G VYT +LG+ + P + G L V +IA G ++ L
Sbjct: 548 SLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL-PARVEGKLSRSSVEEIACGAYHVAVLT 606
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D+ P L+E + ++ + AA H V
Sbjct: 607 ---SKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAICLHKWV 663
Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 321
G D +C+ + R+ C G C S K A N KA V Y
Sbjct: 664 SGVDQSMCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 723
Query: 322 TTFVVSEDGDVYS 334
+ + D S
Sbjct: 724 NKLRKAMETDASS 736
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 21/231 (9%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 186
+GV+ L+ P+ +ES + V A G A+++++G + FSWG ++ RLGH +
Sbjct: 297 FGVKMDSLL--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 352
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ + P L+ L N + +A G + A+ + + G G LGHG+
Sbjct: 353 SDVLHPQ-LIEALSNTNIEFVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 410
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+ V+
Sbjct: 411 VPKRVNG-PLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVE 469
Query: 307 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
+L ++ + A G + T V E G ++++G G+ LGH
Sbjct: 470 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 520
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 38 EACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 96
E R + + IA G H +TSK VY++G ++G+LGHG T+++ P + +L+ +
Sbjct: 584 EGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQ 643
Query: 97 IIQAAAGAGRTMLI 110
+ A G T I
Sbjct: 644 VKSIACGTNFTAAI 657
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 149/337 (44%), Gaps = 44/337 (13%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++ +G N GQLG P P +L +R IQ A G ++ G++YA G
Sbjct: 3945 TIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G+ GT V++P LVESL+++ + + A+ G LS +G V+++ G D +
Sbjct: 4005 A--GGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L I VV IA G + AC S V + G G G+LGHG
Sbjct: 4063 LGHGNRDSYDRPK-LIEALSGIGVVDIACGSAH---SACITSQGHVLTWGKGRYGRLGHG 4118
Query: 241 SRTDEKHPR--------------------LIEQFQLLNLQP-----------VVVAAGAW 269
D+ P+ L E+ + P + V G+
Sbjct: 4119 DSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQ 4178
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
+ + + G V TWG G Y LGHGN + PK V AL K I +ATG S+
Sbjct: 4179 FSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4238
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQ 366
G+V+++G + LG DG V ++ + Q LQ
Sbjct: 4239 GEVFTWGDNDEGQLG-----DGTVTAIQRPRLVQSLQ 4270
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
I+G S+ + S+ G +Y+ G ++G+LG G PR PI + ++ + +G
Sbjct: 2945 ISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGK 3004
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
M ++ G+V+++G+ G+ +G + T + P+L+ESL+ + A G+ +A ++
Sbjct: 3005 HAMALTLDGKVFSWGEGEDGKLGHGNRVT--LEKPKLLESLRTKRIRDIACGSSHSAAIT 3062
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G +YT+ G RLGH ++P L+ L+ VVQ+A G L G+
Sbjct: 3063 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALQGHRVVQVACGSRDAQTLCLTEEGL- 3120
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P +E+ + + V + GA + + + G V TWG
Sbjct: 3121 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGV--VQIECGAQFSLALTKIGEVWTWGK 3178
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P +Q L K IHVA G V++ G V+++G
Sbjct: 3179 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWG 3229
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ + SL+ RI A G+ +
Sbjct: 3001 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAA 3060
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P+LV +L+ VVQ A G + T L+ E
Sbjct: 3061 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQGHRVVQVACGSRDAQTLCLTEE 3118
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L + VVQI G + LAL V+
Sbjct: 3119 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNGVGVVQIECGAQFSLALT---KIGEVW 3174
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3175 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDN 3231
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3232 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG-AGR-TMLISDAGQ 115
VT+ G +YS H + E P+ + L+G+ +IQ AA GR M +S AG+
Sbjct: 549 VTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGE 599
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VY++G G +G +K V + +E K + + A G ++A +S G ++T+
Sbjct: 600 VYSWGAGEGGRLGHGDTASKEVPTKIALE--KQVTAIYA--GASYSAAVSSVGELFTWGR 655
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G RLGH + P + L+ VV +A G ++A G+ +++ G G G
Sbjct: 656 GTYGRLGHGNSDDKFVPTQVQA-LKAYKVVDVALGSGDAHSMAVTDGGL-LFAWGDGDFG 713
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
KLG+GS P IE + + +G+ + + DG + +WG G G LGHGN
Sbjct: 714 KLGNGSCNGSPLPVQIEGVSSV----ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN 769
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
E +VPK+V AL K + VA G ++ G++Y +G
Sbjct: 770 SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 153/330 (46%), Gaps = 26/330 (7%)
Query: 31 LRFLLAGEACCRRENSQAIAGPGHSIA-----------VTSKGVVYSFGSNSSGQLGHGT 79
L +L + EN A A P +S + ++SK +V+ G N QLG
Sbjct: 2868 LEMMLQNASFLATENDSA-AEPSYSTSSNYADEQSSNEISSKVLVW--GLNDKEQLGGLK 2924
Query: 80 TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
+ P L ++ I + G+ ++S G++YA G+ + G G+ V +
Sbjct: 2925 GSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGR--LGLGHNNNVPT 2982
Query: 140 PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P+ V L V + A+ G L+ +G+V+++ G D +LGH +P LL
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPK-LLE 3041
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
+L + IA G + A+ S +Y+ G G G+LGHG + P+L+ Q
Sbjct: 3042 SLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQ-- 3096
Query: 258 NLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
+ V VA G+ A + ++G V +WG G +G LG G E SVP V+ LN V +
Sbjct: 3097 GHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQ 3156
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ G + +++ G+V+++G G+ LGH
Sbjct: 3157 IECGAQFSLALTKIGEVWTWGKGDYYRLGH 3186
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S G V+S+G G+LGHG + RP+ I +L GI ++ A G+ +
Sbjct: 4038 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSAC 4097
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKL-------------------------------VT 138
I+ G V +GK +G +G +L
Sbjct: 4098 ITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGAR 4157
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
SP +ESL + V++ G+ F+ L+R G VYT+ G+ RLGH + P +
Sbjct: 4158 SPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK-VAA 4216
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
L+ ++ IA G + +AC SG V++ G G+LG G+ T + PRL++ Q
Sbjct: 4217 LQGKKIISIATGSLH--CVACSDSG-EVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQ 4270
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
++Y F ++ + + G+ S +E ++ V Q A +++ G++Y+
Sbjct: 500 EMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI- 558
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
H + V P L+ LE + V+QIAA A+A +G VYS G G G
Sbjct: 559 --------HSSCAETVAPK-LVEGLEGVSVIQIAAHCEGRHAMALSSAG-EVYSWGAGEG 608
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG ++ P I L Q + AGA ++A V G + TWG G YG LGHG
Sbjct: 609 GRLGHGDTASKEVPTKIA----LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHG 664
Query: 295 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
N + + VP VQAL K + VA +GD + V++ G ++++G G+ LG+
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGN 717
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 66 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
S SN+S QL G+ + I +++ Q A +++ +GQ+Y+ S
Sbjct: 506 SEASNASAQLLAGSVPR-YSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI-HSSCA 563
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLG 182
E +P+LVE L+ + V+Q A G A LS G VY++ G RLG
Sbjct: 564 E----------TVAPKLVEGLEGVSVIQIAAHCEGRHAMA-LSSAGEVYSWGAGEGGRLG 612
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
H + P + LE V I AG Y A++ S +++ G G G+LGHG+
Sbjct: 613 HGDTASKEVPTKI--ALEK-QVTAIYAGASYSAAVS---SVGELFTWGRGTYGRLGHGNS 666
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
D+ P ++ + + V + +G H+ V G + WG G +G LG+G+ +P
Sbjct: 667 DDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLP 726
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ ++ V I+ +G + +S DG +YS+G G LGH
Sbjct: 727 VQIEGVSSVARIY--SGSQFSVALSYDGTLYSWGKGHGGRLGH 767
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 18/237 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A++S G VYS+G+ G+LGHG T + P I + + I AGA + +S
Sbjct: 590 HAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIY--AGASYSAAVSSV 647
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G+++ +G+ ++G +G K V P V++LK VV A+ G+ + ++ G ++
Sbjct: 648 GELFTWGRGTYGRLGHGNSDDKFV--PTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLF 705
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVG 230
+ G+ +LG+ + PL +E + V +I +G + +AL+ + +YS G
Sbjct: 706 AWGDGDFGKLGNGS----CNGSPLPVQIEGVSSVARIYSGSQFSVALSYDGT---LYSWG 758
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G GG+LGHG+ P+L+ + + V VA G+ H + G + +GWGR
Sbjct: 759 KGHGGRLGHGNSEHSNVPKLVHALEGKKI--VDVAVGSAHCLALTSSGEL--YGWGR 811
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 107
AG +S AV+S G ++++G + G+LGHG +++++ P +++L+ +++ A G+G +
Sbjct: 636 AGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHS 695
Query: 108 MLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
M ++D G ++A+G FG+ G G+ L + V S+ I+ G+ F+ LS
Sbjct: 696 MAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYS-----GSQFSVALSY 750
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+G +Y++ G+ RLGH + P L+ LE +V +A G + LAL
Sbjct: 751 DGTLYSWGKGHGGRLGHGNSEHSNVPK-LVHALEGKKIVDVAVGSAHCLALT 801
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G F WG++ R LG P P L + +QIA G L A+ P G
Sbjct: 3942 GASTIFGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-K 3997
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + DG V +WG
Sbjct: 3998 LYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGE 4057
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G G LGHGN + PK+++AL+ + + +A G + ++ G V ++G G LGH
Sbjct: 4058 GEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGH 4117
Query: 346 NAIAD 350
D
Sbjct: 4118 GDSED 4122
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA + +
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAV 3219
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+D+GQV+A+G + G+ G T + P LV L +FV + A G+
Sbjct: 3220 TDSGQVFAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGS 3265
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 47/75 (62%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G S+A++ G +YS+G G+LGHG +E P+ + +L+G +I+ A G+ +
Sbjct: 740 SGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLA 799
Query: 110 ISDAGQVYAFGKDSF 124
++ +G++Y +G++ +
Sbjct: 800 LTSSGELYGWGRNDY 814
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H +AVT G V+++G N GQ G G T +P + L G+ + + A G+ ++
Sbjct: 3212 GALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAW 3271
Query: 111 S--------DAGQ--VYAFGKDSFGEAE---YGVQGTKLVTSPQL 142
S D + +A KD G Y + + PQL
Sbjct: 3272 SLPQNPSEKDKKEPVPFAVSKDPLGSHSLGIYALDSEPTTSQPQL 3316
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 392 GEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 451
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + ++A+ G + TA +
Sbjct: 452 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEV 509
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + N Q+A G+ +
Sbjct: 510 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNF--CQVACGHSLTV 567
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D K P +E +LL +A GA+H AV+
Sbjct: 568 ALTT--SGH-VYAMGSPVYGQLGN-PQADGKLPTRVEG-KLLKSFVEEIACGAYHVAVLT 622
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V AL D +A G T +
Sbjct: 623 LRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 27/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++++G++S G +GV V P+L+++
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLIDA 380
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L N + A G + T ++ G +YT WGN A LGH + + P + G LE
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYT--WGNGAYNYGLLGHGNQVSHWVPKRVNGPLEG 438
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 439 IHVSYISCGPWH---TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 493
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ + G WH A V + G++ TWG G G LGHG++E + VP V AL
Sbjct: 494 MRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-ALV 552
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG++
Sbjct: 553 EHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLG-NPQADGKL 595
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++A+ G T +
Sbjct: 447 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAV 506
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + KLV P V +++ F Q A G+
Sbjct: 507 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVALVEHNF-CQVACGH 563
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VY +LG + + + P + G L V +IA G ++ L
Sbjct: 564 SLTVALTTSGHVYAMGSPVYGQLG-NPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLT 622
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
+ VY+ G G G+LGHG D +P L++ + +++ + AA H V
Sbjct: 623 LRNE---VYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHKWV 679
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 680 SGVDQSMCS 688
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ VG GLG K+ D P+ +E +L++Q + A G HAA+V + G + +WG
Sbjct: 308 HRVGSGLGVKI------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEE 359
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
G LGHG + PK++ AL++ VA G+Y T V+ GD+Y++G G
Sbjct: 360 SGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNG 411
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 25/277 (9%)
Query: 55 SIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLIS 111
S AVT G +Y +G N+ G LG G+ +W PR + L+GI + + G T +++
Sbjct: 335 SCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVT 394
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
AGQ++ FG +FG +G + + V++P+ VESLK + ++ A G + TA +
Sbjct: 395 SAGQLFTFGDGTFGVLGHGDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGS 452
Query: 165 -----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
G+++T+ G+ RLGH + + P + TL Q+A G+ +AL
Sbjct: 453 SSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVP-TYVATLVEPSFCQVACGHSLTVALTT 511
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG VY++G + G+LG+ + D K P +E + N + A GA+H AV+
Sbjct: 512 --SGQ-VYTMGSPVYGQLGN-PQADGKVPTRVEGKLMKNFVEEL-ACGAYHVAVLTSRTE 566
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAI 314
V TWG G G LGHG+ + + P +V+AL D VK I
Sbjct: 567 VYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGI 603
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+++G++ G +GV V+ P+ V+
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDG 319
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
LKN V A G + + ++ G +Y WG +A LG +E P L G LE
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWVPRKLSGPLEG 377
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V ++ G + + S +++ G G G LGHG R+ PR +E L L+
Sbjct: 378 IHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRSSVSTPREVES--LKGLRT 432
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ VA G WH A V + G++ TWG G G LGHG++E VP V L
Sbjct: 433 MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLV 492
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG+V
Sbjct: 493 EPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-NPQADGKV 535
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++ A G
Sbjct: 381 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVW 440
Query: 106 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + + G+++ +G G +G + +LV P V +L Q
Sbjct: 441 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLV--PTYVATLVEPSFCQ 498
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ T L+ G+VYT +LG+ V P + G L V ++A G +
Sbjct: 499 VACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLMKNFVEELACGAYH 557
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
+ L S VY+ G G G+LGHG D P ++E + ++ ++ AA
Sbjct: 558 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAIC 614
Query: 269 WHAAVVGQDGRVCT 282
H V G D +C+
Sbjct: 615 LHKWVSGIDQSMCS 628
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G H++ + + +V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + GV K + +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G + P I L NL + ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGA--LKNLGVIYISCGDEHTAVLSQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+G G LG+ + P++V+ ++ + + GD+T V G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + PR I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECE----SVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 13/264 (4%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ LAL+ V+S G G+LG G + P+ + + + L VAAG H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193
Query: 272 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+ G WG G L G + + P + AL ++ I+++ GD T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253
Query: 329 DGDVYSFGCGESASLGHNAIADGQ 352
DG V++FG S LG++ + +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T ++S G+V+ FG +S G+ Y K PQLVE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301
Query: 163 VLSREGRVYTFSWGNDA 179
+ G+V +F G A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 111 bits (277), Expect = 6e-22, Method: Composition-based stats.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQGIR 96
Q G GH++AV KG VYS+G+++ GQLG + ++ + PR I LQ ++
Sbjct: 27 QVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVK 86
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY--------GVQGTKLVTSPQLVESLKN 148
+IQ A G T+ ++ G++Y++G G+ + G P+L+ LKN
Sbjct: 87 VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKN 146
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVEPHPL------LGTL 199
+ V Q A G T + G +Y++ G +LGH + P D + +P + L
Sbjct: 147 LEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTAL 206
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----------PR 249
+ ++ + G + + L Q +Y G G G+LG G+ + P+
Sbjct: 207 KPFKLIHASCGDVHTMVLTDQGE---IYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPK 263
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----------HGNEECE 299
IE Q + + V ++ G H+ + ++G V WG YG LG N+ +
Sbjct: 264 KIESLQGIFI--VSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P+ V AL + K + ++ G+ T ++E G +YSFG LG
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 34/232 (14%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQ 93
E Q G H++AV + G +YS+G+ + GQLGH T + PR + +L+
Sbjct: 148 EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALK 207
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVES 145
++I A+ G TM+++D G++Y FG S G+ +G V + P+ +ES
Sbjct: 208 PFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIES 267
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---------NDAR-LGHHTEPNDVEPHPL 195
L+ IF+V + G+ + LSREG VY +WG +D R L +T+ +P P
Sbjct: 268 LQGIFIVSLSCGDSHSMALSREGHVY--AWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQ 325
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ L N +V I+ G + LAL G +YS G G+LG + EK
Sbjct: 326 KVVALMNKKIVAISCGETHTLALT---EGGHLYSFGGNTCGQLGQYVKELEK 374
Score = 95.1 bits (235), Expect = 5e-17, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 44/306 (14%)
Query: 84 WRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--------VQG 133
++P P I L+ I Q A G G T+ + G VY++G + G+ V+G
Sbjct: 10 FQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69
Query: 134 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPND- 189
+P+++E L+++ V+Q A G+ T L+++G++Y++ G +LGH P D
Sbjct: 70 YPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDE 129
Query: 190 ----VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 243
+P P L+ L+N+ V Q+A G + +A+ + +YS G G G+LGH +
Sbjct: 130 DGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVL---NNGHLYSWGAGACGQLGHPDTSS 186
Query: 244 ---DEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
DE PR + + L + + G H V+ G + +G G G LG G
Sbjct: 187 FPADEDGYPYQPIPRCVTALKPFKL--IHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFG 244
Query: 295 N--------EECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
N + C VPK +++L + + ++ GD + +S +G VY++G LG
Sbjct: 245 NISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLG 304
Query: 345 HNAIAD 350
+ I D
Sbjct: 305 LDDIRD 310
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 38/249 (15%)
Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE--- 186
+G P ++ L+N + Q A G+ T + +G VY SWG A +LG +
Sbjct: 6 EGYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVY--SWGASACGQLGLASMKDL 63
Query: 187 PNDVEPHP------LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
P DVE +P ++ L+++ V+QIA G + +AL +YS G G G+LGH
Sbjct: 64 PTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALT---QDGKLYSWGGGGCGQLGHP 120
Query: 241 SRT----DEK------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
+ DE P+LI L NL+ VA G H V +G + +WG G G
Sbjct: 121 DTSAMPKDEDGCPYQPKPKLI--VVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQ 178
Query: 291 LGHGNEEC----------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
LGH + + +P+ V AL K IH + GD T V+++ G++Y FG G
Sbjct: 179 LGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSC 238
Query: 341 ASLGHNAIA 349
LG I+
Sbjct: 239 GQLGFGNIS 247
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T V+ G N SG LG G + PR + SL G +I + G+G +L ++ G+VY
Sbjct: 43 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 102
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G V Q+ +L N V++ A G+ + VL+ +G VYT+ + N
Sbjct: 103 TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 161
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + L+N VV IA G + ++A +G VY G G+L
Sbjct: 162 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 218
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG GN+
Sbjct: 219 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 276
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 277 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVILPH 327
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T +G VY++G N+ QLG+GTT + P + + L ++I+ A G+ +M
Sbjct: 88 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 146
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 147 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 204
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 205 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 259
Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+LG G+++++ +P ++++ +++ + A +A Q G+V WG
Sbjct: 260 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 316
Query: 285 WGR 287
R
Sbjct: 317 QCR 319
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR ++ + + +G H + ++G V TWG
Sbjct: 48 VFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGP-HVVLATEEGEVYTWGH 106
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP +V L + K I VA G + + V++ DG+VY++G S +G
Sbjct: 107 NAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG 166
Query: 345 HNAIAD 350
+ A+
Sbjct: 167 SGSTAN 172
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G H++ + + +V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + GV K + +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
S G G + P I + NL + ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFT 259
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+G G LG+ + P++V+ ++ + + GD+T V G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + PR I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECE----SVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 13/264 (4%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ LAL+ V+S G G+LG G + P+ + + + L VAAG H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193
Query: 272 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+ G WG G L G + + P + AL ++ I+++ GD T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253
Query: 329 DGDVYSFGCGESASLGHNAIADGQ 352
DG V++FG S LG++ + +
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T ++S G+V+ FG +S G+ Y K PQLVE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301
Query: 163 VLSREGRVYTFSWGNDA 179
+ G+V +F G A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 28/308 (9%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLK---NIFVVQAAIGNFFTA 162
+ + D G+ YA+G + +G+ E G + +V + + V Q A G +
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSV 163
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 218
VL+REG V+++ G P D++ P + G LEN+ ++ + A LA
Sbjct: 164 VLTREGHVWSW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGA----FHNLA 210
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ +G +++ G G+LG G P ++ L L V +AAG WH+ + G
Sbjct: 211 LEENG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTL--VDIAAGGWHSTALTDKG 267
Query: 279 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++SFG
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 337 CGESASLG 344
G+ LG
Sbjct: 328 RGDHGRLG 335
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 20/289 (6%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V ++GS GQLG GT +E+ + +L+ + +G+ ++ I D G ++ +G +
Sbjct: 6 TVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWN 65
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G + + TK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 66 QRGTLGHPPE-TKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 183 HHTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+++E PL + + V Q+AAG + + L + V+S G
Sbjct: 125 EEPGKDEME-RPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGH---VWS----WGQ 176
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
G P ++ + + L +A GA+H + ++G + WG YG LG G+
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ S P VQ L+ + + +A G + + +++ G+VY +G GE LG
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN + IA G H++A+ G ++++G+N GQLG G T+ +P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAA 255
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + ++D G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLG 182
L+R+GR+++F G+ RLG
Sbjct: 316 ALTRDGRIFSFGRGDHGRLG 335
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG G + + VV+AL V +G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 157/321 (48%), Gaps = 31/321 (9%)
Query: 58 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G + G L GT +E PRP+ S + + Q G L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG---- 278
++ G G G LGHG+R +P+ ++ L L+ V VA WH A V+GQ G
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQ--SLNGLKTVKVACSIWHTAAIVEVMGQTGTSMS 437
Query: 279 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++ G
Sbjct: 438 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMG 497
Query: 337 CGESASLGHNAIADGQVCSLL 357
LG N+I+DG++ L+
Sbjct: 498 GTAHGQLG-NSISDGKLPCLV 517
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 144/273 (52%), Gaps = 21/273 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ V++ G ++S+G ++ G LGHG+ W P+ + L+G++++ A G +
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
L + G+++ FG +FG +G + + V+ P+ V+SL + V+ A + TA V
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 428
Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ + G +++T+ G+ RLGH + + P + +L + +IA G+ + +AL
Sbjct: 429 MGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTVAL 487
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ S +D K P L+ Q +L+ +A G H AV+
Sbjct: 488 TT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGDHHVAVLTSR 542
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V TWG G G LGHG+ E + P V+AL D
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALRD 575
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T V+ G N SG LG G + PR + SL G +I + G+G +L ++ G+VY
Sbjct: 38 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 97
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G V Q+ +L N V++ A G+ + VL+ +G VYT+ + N
Sbjct: 98 TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 156
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + L+N VV IA G + ++A +G VY G G+L
Sbjct: 157 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 213
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG GN+
Sbjct: 214 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 271
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D V I +T+ ++ G VY +G C G+S + H
Sbjct: 272 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPH 322
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T +G VY++G N+ QLG+GTT + P + + L ++I+ A G+ +M
Sbjct: 83 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 141
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 142 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 199
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 254
Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+LG G+++++ +P ++++ +++ + A +A Q G+V WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 311
Query: 285 WGR 287
R
Sbjct: 312 QCR 314
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR ++ + + +G H + ++G V TWG
Sbjct: 43 VFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGP-HVVLATEEGEVYTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP +V L + K I VA G + + V++ DG+VY++G S +G
Sbjct: 102 NAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + V+ P+ VESL + + A G + TA +
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAVVEV 456
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+++T+ G+ RLGH + +EP + L + +IA G+ +
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEP-TCVSLLIDSNFHRIACGHSLTVG 515
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G + G+LG+ ++D K P L++ +L +A GA+H AV+
Sbjct: 516 LT---TSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 613
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+ +ES + V+Q A G A+++R+G ++T+ + RLGH N ++P L+ +
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR-LVEAM 328
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 255
+ V +A G + A+ MA +Y+ G G G LGHG+ P+ I
Sbjct: 329 ASTTVDFVACGEFHTCAVT-----MAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-P 382
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
L LQ +V G WH A++ G++ T+G G +G LGHG+ E S P+ V++L+ ++ I
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIA 442
Query: 316 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGH---NAIADGQVCSLLFLSI 361
VA G + T V E ++++G G+ LGH +A + SLL S
Sbjct: 443 VACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSN 502
Query: 362 FQYL 365
F +
Sbjct: 503 FHRI 506
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I A G T +
Sbjct: 394 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 453
Query: 111 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ + +++ +G +G + +L P V L + + A G+
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL--EPTCVSLLIDSNFHRIACGHS 511
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G V+T +LG+ V P + L V +IA G ++ L
Sbjct: 512 LTVGLTTSGEVFTMGSSVYGQLGNPQSDGKV-PCLVKDKLAGESVEEIACGAYHVAVLT- 569
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 570 --SKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 620
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLIC 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
++ G VYA G +S E + G+ T+ ++ L+ K + Q A G++ +AVL+ +G+
Sbjct: 103 TEQGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQ 160
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+ + ++ ++G + PH + +G PV I+ GY Y AL Q +Y+
Sbjct: 161 LVMWGDNSEGQIGLGDKAYVSVPHQVDIGK----PVSCISCGY-YHSALITQDG--ELYT 213
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLG + + H +L + ++ + VA G H V+ + G V T+G G+Y
Sbjct: 214 FGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAE-GDVYTFGLGQY 271
Query: 289 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG E S PK V L K H+A G+ T +++E+G +Y+FG G LG
Sbjct: 272 GQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLG 328
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++ T +G VY+ G NS GQLG G TEE I + +I Q AAG+
Sbjct: 92 AACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++++ GQ+ +G +S E + G+ V+ P V+ K + + + G + +A++++
Sbjct: 152 SAVLTEDGQLVMWGDNS--EGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQ 207
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLALACQPSGM 224
+G +YTF + +LG P ++ H L + I V ++A G + + LA
Sbjct: 208 DGELYTFGEPENGKLG--LSPKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLA----EG 261
Query: 225 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LGHG+ E P+ ++ L + +A G H A++ ++G + T+
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSEPKTVD--HLGKHKICHIACGENHTALITENGLMYTF 319
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 320 GDGRHGKLGLGEE 332
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
+ + + + G T ++++ G++Y FG +++G+ +G + V P V++LK V
Sbjct: 32 FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKV 89
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
AA G T + + +G VY ++ +LG H + + + Q+AAG
Sbjct: 90 KLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAG- 148
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWH 270
Y A+ + + ++ G G++G G + P ++ + PV ++ G +H
Sbjct: 149 SYTSAVLTEDGQLVMW--GDNSEGQIGLGDKAYVSVPHQVDIGK-----PVSCISCGYYH 201
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSE 328
+A++ QDG + T+G G LG ++ ++ +P++V ++ K VA G T V++E
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE 260
Query: 329 DGDVYSFGCGESASLGH 345
GDVY+FG G+ LGH
Sbjct: 261 -GDVYTFGLGQYGQLGH 276
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTAVLSR 166
+ ++G V+ FGK F E V S KN + + G+ T+V++
Sbjct: 8 VPESGAVFTFGKCKFAEN---------------VPSKFWFKNDKPLHISCGDEHTSVVTE 52
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G++Y F N +LG ++ N V + L+ V A G + L C G V
Sbjct: 53 NGKLYMFGSNNWGQLGFGSK-NAVNKPTCVKALKPEKVKLAACGRNH--TLICTEQG-NV 108
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G+LG G T+E+ + F + +AAG++ +AV+ +DG++ WG
Sbjct: 109 YAAGGNSEGQLGLGD-TEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDN 167
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G++ SVP V V I + G Y + ++++DG++Y+FG E+ LG
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQDGELYTFGEPENGKLG 223
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S +T G + +G NS GQ+G G P + + + I + G
Sbjct: 144 QLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYH 201
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ LI+ G++Y FG+ G+ + K PQLV + V + A G T VL+
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGK-VSKVACGGGHTVVLA- 259
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
EG VYTF G +LGH T + + L + IA G + + +G+ +
Sbjct: 260 EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALIT--ENGL-M 316
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G G GKLG G T++ P L F L VA G H V
Sbjct: 317 YTFGDGRHGKLGLGEENYTNQFVPTLCSNF--LRFIVHSVACGGCHMLV 363
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 431
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
+++ +GQ++ FG +FG +G TK V+ P+ VESLK V +A G + TA +
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVWHTAAVVEI 489
Query: 167 -----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + L + ++A G+ +
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVDPNFCRVACGHSLTV 548
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG VY++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 549 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPTRVEG-KLAKSFVEEIACGAYHVAVLT 603
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 604 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 654
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+++++G++S G +GV V P+L++S
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLIDS 360
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L N + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 420
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + + S +++ G G G LGHG PR +E L + V+
Sbjct: 421 VSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDTKSVSKPREVE--SLKGHRTVI 475
Query: 264 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
A G WH A V + G++ TWG G G LGHG++E + VP V AL D
Sbjct: 476 SACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDP 535
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VA G T ++ G VY+ G LG N ADG++
Sbjct: 536 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKL 576
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG T+ +PR + SL+G R + +A G T +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAV 486
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G G +G + KLV P V +L + + A G+
Sbjct: 487 VEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVDPNFCRVACGH 544
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + P + G L V +IA G ++ L
Sbjct: 545 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLT 603
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P L+E + ++ + A H V
Sbjct: 604 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 661 SGVDQSMCS 669
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G + D P+ +E +L++Q + A G HAA+V + G + +WG G LGHG +
Sbjct: 295 GMKMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV 352
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK++ +L++ VA G+Y T V+ GD+Y++G G
Sbjct: 353 LHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDG 391
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 149/297 (50%), Gaps = 13/297 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 108
AG + AV S G V + G S G+LG+G + P I +R I + G+ G ++
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSI 227
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
I GQ++ +G +G+ +G T+ SP+L+E+L + +V A G+ +A + G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + G+ RLG P + E Q+ G+ + + L+ G V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLGHG + P++I+ Q L + + AAG +A V ++G + WG+G
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTITQI--AAGTQISAAVTREGALYVWGFGP- 397
Query: 289 GCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
CLG+G+ +E +PKVV+ L+ I +A G+ +++DG V+++G ++ G
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCG 453
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 21/279 (7%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHSIA+ G ++++G G+LGHG + + P+ I +L I+ A G + + D
Sbjct: 224 GHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCD 283
Query: 113 AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR- 169
AG +Y +G+ +G G +Q + V P + E+ Q G T VLS +GR
Sbjct: 284 AGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRT 337
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V++F + +LGH P ++ L+ + + QIAAG + A + + V+
Sbjct: 338 VWSFGAAENGKLGHGDTNRQFRPK-IIDALQGLTITQIAAG-TQISAAVTREGALYVW-- 393
Query: 230 GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G LG+GS +DE P+++ L + +A G H + +DG V TWG +
Sbjct: 394 --GFGPCLGNGS-SDETFMLPKVVR--GLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQ 448
Query: 288 YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFV 325
G G G+ + P++VQ L+ V G TFV
Sbjct: 449 NGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 19/280 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V+ +GSNSS QL T E++ PR + S+ G +++ AG T + G V A GK
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSMTAGQYCTFAVLSNGTVMANGKG 188
Query: 123 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
S+G G + +SP L+E ++ I + + G+ + + + G+++T+ G+
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SIAIGKNGQIWTWGDGDYG 244
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH P L+ L + +V G+ + A+ C + Y G G G+LG
Sbjct: 245 KLGHGDSTTQKSPK-LIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 298
G P + + + V G H V+ DGR V ++G G LGHG+
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ PK++ AL + +A G + V+ +G +Y +G G
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFG 396
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTW 283
+++ G G GKLGHG T +K P+LIE V+V A G H+A V G + W
Sbjct: 235 IWTWGDGDYGKLGHGDSTTQKSPKLIEALA----SRVIVDADCGHRHSAAVCDAGHLYMW 290
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 342
G G YG LG G+ SVP VQ + +A V G T V+S DG V+SFG E+
Sbjct: 291 GEGDYGRLGLGDALQRSVP--VQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGK 348
Query: 343 LGH 345
LGH
Sbjct: 349 LGH 351
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 173 FSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F WG N ++ P D +P ++ + A YC L S V + G
Sbjct: 132 FCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVL----SNGTVMANGK 187
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G+LG+G+ P LIE F + + H+ +G++G++ TWG G YG L
Sbjct: 188 GSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKL 246
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+ + PK+++AL + G + V + G +Y +G G+ LG
Sbjct: 247 GHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG 299
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA R A G HS AV G +Y +G G+LG G + R P++
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318
Query: 98 IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q G T+++S G+ V++FG G+ +G T P+++++L+ + + Q A
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G +A ++REG +Y WG LG+ + ++ L V+ IA G +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVA 434
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L G+ V++ G G+ G GS P++++ +Q V AG H V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 155/308 (50%), Gaps = 15/308 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T G +YS G+N GQLGH + R + I L + A G
Sbjct: 67 EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRK--RLQLILGLDAFVFKKVACG 124
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 162
A T+ +++ GQ++++G +S E + G+ + SP++V++L +VQ A G
Sbjct: 125 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHAL 182
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ G +Y++ ++ +LG + ++V+P L+ TL +P+ IA G + ++A
Sbjct: 183 ALTNNGELYSWGSNSEGQLGLGVDIRSEVKPK-LINTLAGVPIAFIACGGYH--SIAISK 239
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRV 280
SG A++ G G+LG D ++ L Q Q L N + A G + + DG V
Sbjct: 240 SG-AIFGWGKNTFGQLG---LNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGV 295
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 339
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G
Sbjct: 296 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355
Query: 340 SASLGHNA 347
+ LG+N+
Sbjct: 356 AGQLGNNS 363
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IAV G ++S+GSNS GQLG + E PR +++L I+Q A G +
Sbjct: 124 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALA 183
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G++Y++G +S G+ GV + P+L+ +L + + A G + + +S+ G
Sbjct: 184 LTNNGELYSWGSNSEGQLGLGVD-IRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGA 242
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + N PH L TL N + A G + + L V+
Sbjct: 243 I--FGWGKNTFGQLGLNDTQNRNLPHQL-QTLRNAKICYAACGEEFSVFLTVDG---GVF 296
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G+ G+LGHGS +E PR + +L+ ++ G H A+V GRV WG G
Sbjct: 297 TCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVTQISCGKRHTLALVPSQGRVYAWGLG 354
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG+ + P+VV
Sbjct: 355 GAGQLGNNSTRSIPTPQVVH 374
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H++A+T+ G +YS+GSNS GQLG G E +P+ I +L G+ I A G
Sbjct: 173 QVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGY 232
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ IS +G ++ +GK++FG+ G+ T+ P +++L+N + AA G F+ L+
Sbjct: 233 HSIAISKSGAIFGWGKNTFGQL--GLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLT 290
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P ++ L V QI+ G + LAL PS
Sbjct: 291 VDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSQGR 347
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ S P+++
Sbjct: 348 VYAWGLGGAGQLGNNSTRSIPTPQVV 373
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 153/311 (49%), Gaps = 22/311 (7%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
++ KG ++ +G+ G+LG G E+E P + + I Q A G T++I+ G
Sbjct: 26 SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDG 85
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
++Y+ G + +G+ + +L QL+ L + A G + T ++ G++ FS
Sbjct: 86 KIYSCGNNDYGQLGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQL--FS 139
Query: 175 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
WG+++ +LG +++ N +E P ++ TL +VQ+A G + LAL + +YS G
Sbjct: 140 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQVACGMKHALALT---NNGELYSWGS 195
Query: 232 GLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G E P+LI L + +A G +H+ + + G + WG +G
Sbjct: 196 NSEGQLGLGVDIRSEVKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 253
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----N 346
LG + + ++P +Q L + K + A G+ + ++ DG V++ G G LGH N
Sbjct: 254 LGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 313
Query: 347 AIADGQVCSLL 357
I QV L+
Sbjct: 314 EILPRQVMELM 324
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 9/232 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GH AVT G V+++G + G+LGH E P + L G+R ++ A G T+ ++D
Sbjct: 113 GHMAAVTEDGSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD 171
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G+V+A+G + G +GT +PQ +ESL+ ++ + G +A LS E VYT
Sbjct: 172 DGRVFAWGNNKTGCVGVSDRGT---CAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ N +LG + + TL N+P+VQIA G ++LAL+ + VY+ G G
Sbjct: 229 WGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALS---AAGEVYAWGQG 285
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
L G+ + + D P +I+ + ++ ++AAG H+AVV GR+ T G
Sbjct: 286 LQGQTANEKKVDTNIPHVIDALKESRVK--MIAAGGSHSAVVDDKGRLFTVG 335
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 62 GVVYSFGSNSSGQLGHGTT---EEEWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAGQVY 117
GV+++FG S QLGHG T + PR + + G+ ++ + G +++ G V+
Sbjct: 66 GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G+ +FG + V T + P+ V L + V+ A G+ T L+ +GRV F+WGN
Sbjct: 126 TWGRGTFGRLGHEVHETGI---PEKVPGLDGMRFVKVACGHVHTLALTDDGRV--FAWGN 180
Query: 178 DAR--LGHHTE----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ +G P ++E +L ++ I+AG AL+ + VY+ G
Sbjct: 181 NKTGCVGVSDRGTCAPQEIE------SLRGKKIIDISAGMESSAALSAEHE---VYTWGA 231
Query: 232 GLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G+LG G+R + R+ L N+ V +A G +H + G V WG G G
Sbjct: 232 DNYGQLGLGQGARYISQPTRI---RTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQG 288
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ + ++P V+ AL + + +A G + VV + G +++ G
Sbjct: 289 QTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 11/280 (3%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y++GS GQLG GT +E P+ + + AAGA T I+ G ++ FG+
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73
Query: 122 DSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ +G G + V ++ ++ + VV +I + A ++ +G V+T+ G
Sbjct: 74 GDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFG 133
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
RLGH + P + G L+ + V++A G+ + LAL V++ G G +G
Sbjct: 134 RLGHEVHETGI-PEKVPG-LDGMRFVKVACGHVHTLALTDDGR---VFAWGNNKTGCVGV 188
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EEC 298
R P+ IE L + + ++AG +A + + V TWG YG LG G
Sbjct: 189 SDRG-TCAPQEIE--SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARY 245
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
S P ++ L +V + +A G Y +S G+VY++G G
Sbjct: 246 ISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 16/239 (6%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G +Y +G FG+ G Q + + PQ+ + + N A G TA +++ G +
Sbjct: 11 KEGGYLYTWGSGQFGQLGIGTQNDESL--PQIAKEIDNEICTFTAAGANTTAAITQGGVL 68
Query: 171 YTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+TF G+ +LGH N V P + + + VV + ++ A+ S V+
Sbjct: 69 WTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGS---VW 125
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+ G G G+LGH E H I + L ++ V VA G H + DGRV WG
Sbjct: 126 TWGRGTFGRLGH-----EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGN 180
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ GC+G ++ P+ +++L K I ++ G ++ +S + +VY++G LG
Sbjct: 181 NKTGCVGV-SDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLG 238
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 223 GMAVYSVGCGLGGKLGHGSRTD---EKHPRLIEQ-FQLLNLQPVVVAAGAWHAAVVGQDG 278
G +++ G G +LGHG D + PR +E F L++ + G H A V +DG
Sbjct: 65 GGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDG--HMAAVTEDG 122
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G +G LGH E +P+ V L+ ++ + VA G T +++DG V+++G
Sbjct: 123 SVWTWGRGTFGRLGHEVHET-GIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181
Query: 339 ESASLGHNAIADGQVCS 355
++ +G ++D C+
Sbjct: 182 KTGCVG---VSDRGTCA 195
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A + G +Y+ G G G+LG G++ DE P++ ++ N AAGA A + Q
Sbjct: 8 AQEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEID--NEICTFTAAGANTTAAITQG 65
Query: 278 GRVCTWGWGRYGCLGHGNE-ECES--VPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 333
G + T+G G LGHG+ +C + +P+ V+ A + + ++ + D V+EDG V+
Sbjct: 66 GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 334 SFGCGESASLGH 345
++G G LGH
Sbjct: 126 TWGRGTFGRLGH 137
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + TWG G++G LG G + ES+P++ + +++ A G TT +++ G +++FG
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73
Query: 338 GESASLGHNAIAD 350
G+S LGH D
Sbjct: 74 GDSNQLGHGDTGD 86
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 27/351 (7%)
Query: 16 RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
++L CG S K V L+ + G+ + C E Q I + +
Sbjct: 2 EEELPLSCGESGKPVQATLSSLKMVDVGKWPIFSLCSEEELQLIRQACVFGSASNEVLYT 61
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+V+
Sbjct: 62 TVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-YISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + G L+N VV IA G + ++A +G VY G G+L
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQ--MCSMAVVDAG-EVYVWGYNGNGQL 237
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P + Q +++Q V A G H V+ +G+V WG YG LG GN+
Sbjct: 238 GLGSSGNQPTPCRVAALQGIHVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P + D + I +T+ ++ G+VY +G C G+S +L H
Sbjct: 296 NQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTLPH 346
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
IAG S+ + S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 3112 IAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGK 3171
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+ VE+L+ + A G+ +A +S
Sbjct: 3172 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRQVEALRAKKIRDVACGSSHSAAIS 3229
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 3230 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVVQVACGSRDAQTLALTEDG-A 3287
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3345
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWG 3396
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3168 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAA 3227
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3228 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVAALAGRRVVQVACGSRDAQTLALTED 3285
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 3286 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 3341
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3342 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDSGQVYAWGDND 3399
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+DV VA G
Sbjct: 3400 HGQQGSGNTFVNKKPALVIGLDDVFVNRVACG 3431
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4225 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4284
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4285 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4342
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ SG V + G G G+LGHG
Sbjct: 4343 LGHGNRVSYDRPK-LVEHLHGMSVADIACGSAHSAAITA--SGQ-VLTWGKGRYGRLGHG 4398
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4399 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4456
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4457 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4506
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + A G+ ++S+EGRV+ G + RLG N
Sbjct: 3089 GLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNV 3147
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 3148 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3205
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK+V AL
Sbjct: 3206 QVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALA 3263
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ + VA G D T ++EDG V+S+G G+ LG
Sbjct: 3264 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3300
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4318 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAA 4377
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +GQV +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4378 ITASGQVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4435
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4436 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4491
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4492 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 4549
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4550 EGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 13/313 (4%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4270 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4329
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G+V T+
Sbjct: 4330 GEVYAWGEGEDGKLGHGNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTW 4387
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4388 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4445
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L + + V G+ + + + G V TWG G + LGH
Sbjct: 4446 YGKLGRGGSDGCKLPYKIESLAGLGV--IKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4503
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G+ + PK V AL K I +ATG S+ G+VY++G + LG DG V
Sbjct: 4504 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-----DGTV 4558
Query: 354 CSLLFLSIFQYLQ 366
++ + LQ
Sbjct: 4559 TAIQRPRLVSALQ 4571
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3208 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRV 3267
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I V+Q
Sbjct: 3268 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVIQIE 3325
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3326 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3384
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ SG VY+ G G+ G G+ K P L+
Sbjct: 3385 AVT--DSGQ-VYAWGDNDHGQQGSGNTFVNKKPALV 3417
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I A G+ ++S G+V+A G+
Sbjct: 3075 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEG 3134
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3135 TNGRLGLGV--TYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3192
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P + L + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3193 LGHGNRTTLDKPRQV-EALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3248
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+L+ L + V VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3249 DNATQLKPKLVAA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3306
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 3307 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 26/278 (9%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFV 151
++ Q + +L+S G+++A+ + S EAE PQ +E + I +
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW-RLSKPEAE-----------PQPLEEAGHETFISI 634
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 635 AGHCEGRHFMAIDSNHN-AYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVFCGC 692
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y + C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 693 TYSAVITC---GGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +G V WG G YG LG+GN P +V++L V+ I G + +S +G
Sbjct: 750 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYSVALSSEGQ 807
Query: 332 VYSFGCGESASLGHNAIADG-QVCSL-LFLSIFQYLQI 367
VY++ G++ LGH + Q CS+ +S Q+ +I
Sbjct: 808 VYTW--GKATCLGHQLVERSVQGCSVPRLVSSLQHKRI 843
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA + ++D+G
Sbjct: 3331 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSG 3390
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
QVYA+G + G+ G T + P LV L ++FV + A G+
Sbjct: 3391 QVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFVNRVACGS 3432
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 744 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAGSQYSVA 801
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQVY +GK + G E VQG + P+LV SL++ +V A+G LS
Sbjct: 802 LSSEGQVYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDMAVGVAHCLALSS 858
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT-----LENIPVVQIA 208
G V F WG ND + P+ V PLL + L +P IA
Sbjct: 859 SGEV--FGWGRNDCQ---QVCPSSVSSEPLLRSPILVALPTLPASGIA 901
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 26/302 (8%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
CR + Q + + ++ +G ++++ ++ E P+P+ I
Sbjct: 585 CRFQVKQVVCSENQVLLLSQEGKLHAWR----------LSKPEAEPQPLEEAGHETFISI 634
Query: 101 AAG-AGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
A GR + D+ Y++G +G + V P + +L+ V G
Sbjct: 635 AGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVFCGC 692
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
++AV++ G + T+ G ARLGH + P L+ L VV +A G +LA
Sbjct: 693 TYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPT-LVAALAEHTVVDVALGSGDAHSLA 751
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G+ V++ G G GKLG+G+ P L+E + + AG+ ++ + +G
Sbjct: 752 LTSEGL-VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQR----IFAGSQYSVALSSEG 806
Query: 279 RVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+V TWG + CLGH E SVP++V +L + + +A G +S G+V+
Sbjct: 807 QVYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFG 864
Query: 335 FG 336
+G
Sbjct: 865 WG 866
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 18/242 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+ S YS+G+ +LGHG T P I +L+ + G + +I+
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G + +G+ ++ +G + + P LV +L VV A+ G+ + L+ EG V+
Sbjct: 702 GNLLTWGRGTYARLGHGNSDDRCL--PTLVAALAEHTVVDVALGSGDAHSLALTSEGLVF 759
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 230
+ G+ +LG+ ++P +E++P VQ I AG Y +AL+ S VY+ G
Sbjct: 760 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRIFAGSQYSVALS---SEGQVYTWG 812
Query: 231 CG--LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
LG +L S PRL+ Q + V +A G H + G V +GWGR
Sbjct: 813 KATCLGHQLVERSVQGCSVPRLVSSLQHKRI--VDMAVGVAHCLALSSSGEV--FGWGRN 868
Query: 289 GC 290
C
Sbjct: 869 DC 870
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ +I VT V++ G+N SG LG G T+ PR I L G +II + G G ++
Sbjct: 29 SAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVV 88
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
I+ A G+VYA+G + + + G L +P LV + L V + + G+ T L+ +
Sbjct: 89 IATADGEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLIGKRVTEVSCGSHHTIALTTD 146
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY + + N ++G + N P + L+N VV IA G L ++A +G Y
Sbjct: 147 GEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-ETY 203
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ +++ P I Q +N+ + VA G H + +G V +WG
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGINI--IQVACGYAHTLALTDEGFVYSWGANS 261
Query: 288 YGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG GN+ ++VP ++ + + +V A H + +T+ ++ G V +G
Sbjct: 262 YGQLGTGNKSNQAVPTLINMDKERMVEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 21/287 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
GP H + T+ G VY++G N QLG+GTT P + + L G R+ + + G+ T+
Sbjct: 84 GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
++ G+VYA+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 143 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 200
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
Y + + + +LG N P + L+ I ++Q+A GY + LAL G VYS
Sbjct: 201 ETYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGINIIQVACGYAHTLALT--DEGF-VYS 256
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+++++ P LI + V + +A Q G+V WG R
Sbjct: 257 WGANSYGQLGTGNKSNQAVPTLI-NMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRG 315
Query: 289 GCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ + P + + +DV A AT T ++S DGD Y
Sbjct: 316 QAVAY--------PHLTHFTSTDDVFAC-FATPAVTWHLLSVDGDDY 353
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 104
++ G H+IA+T+ G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 131 TEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 190
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+M + D G+ Y +G + G+ G G + +P + +L+ I ++Q A G T L
Sbjct: 191 LCSMAVLDNGETYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGINIIQVACGYAHTLAL 248
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ EG VY++ + +LG + N + P L ++ +V++AA
Sbjct: 249 TDEGFVYSWGANSYGQLGTGNKSN--QAVPTLINMDKERMVEVAA 291
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P +R ++ + +AA + ++D +V+A G + G G+ T+ P+ ++
Sbjct: 15 PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDTQSTIEPRRIDI 70
Query: 146 LKNIFVVQAAIGNFFTAVLSR-EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
L ++ + G V++ +G VY +WG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIISLSYGTGPHVVIATADGEVY--AWGHNGYSQLGNGTTNHGLTPALVSTNLIGK 128
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V +++ G + +AL + VY+ G G++G GS ++ PR + L N V
Sbjct: 129 RVTEVSCGSHHTIALT---TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G + V +G WG+ G LG GN + P + AL + I VA G
Sbjct: 185 NIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAH 244
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
T ++++G VYS+G LG ++ V +L+ + + +++
Sbjct: 245 TLALTDEGFVYSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEV 289
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 22/351 (6%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS--IAVTSK 61
K+ +F+P+ +A LK G W + F L EA + + G + + T
Sbjct: 2 KKILFQPV-QATLSSLKMLDVGKWPI---FSLCSEAELQLVRQACVFGSASNELLYTTVN 57
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G
Sbjct: 58 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWG 117
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N +
Sbjct: 118 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 176
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
+G + N P + G L++ VV IA G + ++A +G V+ G G+LG G
Sbjct: 177 VGSGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLG 233
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 234 SSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 291
Query: 301 VPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
P V D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 292 YPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 339
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 60 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 118
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 119 NAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 178
Query: 345 HNAIAD 350
+ A+
Sbjct: 179 SGSTAN 184
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 464
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 523
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 524 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 578
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 579 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 629
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 277 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 334
Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 335 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 394
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 395 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 449
Query: 263 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 450 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 509
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N DG++ L+
Sbjct: 510 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLV 555
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 274 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 333
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 334 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 389
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 390 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 449
Query: 315 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
V+ G + T V E G ++++G G+ LGH
Sbjct: 450 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH 492
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I + G T +
Sbjct: 402 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 461
Query: 111 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 462 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 519
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G+V+T +LG + + + P + L + V +I+ G ++ AL
Sbjct: 520 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 578
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D K P ++E + +++ + AA H V
Sbjct: 579 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 635
Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECES 300
G + C+ + R+ C G C S
Sbjct: 636 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 669
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 154/302 (50%), Gaps = 9/302 (2%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E QA G HS+ + S G V+S G N+ GQLG E RP I++L+ + + + G
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTA 162
++ + G+V+A+G S E + G++ K + +P+ +++L I ++Q + G++ +
Sbjct: 82 KEHSLAVCHKGRVFAWGAGS--EGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSL 139
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS +G+VY++ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 140 ALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSG 198
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ S G G+ + P I + L++ + ++ G H AV+ Q+G+V
Sbjct: 199 TSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDV--IYISCGYEHTAVLTQNGKVF 256
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G G LG+ + P+ V+ ++ + + + G Y T V G+V SFG G +
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVS-QIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Query: 341 AS 342
+
Sbjct: 316 CA 317
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 11/260 (4%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G + QAA G ++L+ G V++ G ++ G+ G +G P L+++L+ + V
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQ--LGRRGKPREERPGLIKALETLLVGL 77
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G + + +GRV+ + G++ +LG + + TL I ++Q++ G+ +
Sbjct: 78 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYH 137
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
LAL+ VYS G G+LG G + P+ + + + L VAAG H+
Sbjct: 138 SLALS---EDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSF 192
Query: 273 VVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
+ G WG G L G+ P + AL + I+++ G T V++++
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQN 252
Query: 330 GDVYSFGCGESASLGHNAIA 349
G V++FG LG+N A
Sbjct: 253 GKVFTFGDNSCGQLGYNPTA 272
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 197 GTLENIP-------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
G L +P V Q A G + L L S V+S G G+LG + E+ P
Sbjct: 9 GQLRRVPTGAGGAEVRQAACGERHSLLLL---SDGTVHSCGDNTQGQLGRRGKPREERPG 65
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQ 306
LI+ + L + +V+ G H+ V GRV WG G G LG EEC+ PK ++
Sbjct: 66 LIKALETLLVG--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI--EECKEKIFTPKKIK 121
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
L +K I V+ G Y + +SEDG VYS+G LG
Sbjct: 122 TLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLG 159
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 166/357 (46%), Gaps = 27/357 (7%)
Query: 10 PMTEAERQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI------AGPG 53
P T ++L CG S K V L+ L G+ + C E Q I G G
Sbjct: 22 PRTVRMEEELPLFCGYSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGGAG 81
Query: 54 HSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLIS 111
+ + T+ ++ G+N G LG G + PR + SL G +I + G+G +L +
Sbjct: 82 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLAT 141
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+
Sbjct: 142 TEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVF 200
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ + N ++G + N P + G L+N VV IA G + +A SG VY G
Sbjct: 201 AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSG-EVYVWGY 257
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG L
Sbjct: 258 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQL 315
Query: 292 GHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
G GN+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 316 GTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 372
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 161/289 (55%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+++ G ++++G SN+SG LGHGT W P+ + L+G++++ A G +
Sbjct: 325 GEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHS 384
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
L + G+++ FG +FG +G + K V+SP+ ++SL + ++ A G + TA V
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEV 442
Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPT-CVSSLIDYNFQQLACGHTMTVAL 501
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ S ++ K P L+ Q +L+ ++ GA+H AV+
Sbjct: 502 TT--SGH-VFTMGGSAYGQLGNPS-SNGKIPCLV-QDRLVGEFVEEISCGAYHTAVLTSR 556
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E +P +V+AL + +++ G ++T+ +
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSI 605
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 27/312 (8%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G ++S G G + T+ + P+P+ S + + Q + G L++ G+V+ +G
Sbjct: 231 GEIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWG 290
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---- 176
++S G +G++ T P+LVESL + A G + T +S G ++T WG
Sbjct: 291 EESGGRLGHGIEDH--FTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFT--WGDGSN 346
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
N LGH T+ + P + G LE + V+ IA G + ALA S +++ G G G
Sbjct: 347 NSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACG-TWHSALAT--SNGKLFTFGDGTFGA 403
Query: 237 LGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG------RVCTWGW 285
LGHG R P+ + Q LN L+ + VA G WH A V+ Q G ++ TWG
Sbjct: 404 LGHGDRKSVSSPK---ELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGD 460
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGHGN++ +P V +L D +A G T ++ G V++ G LG
Sbjct: 461 GDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG- 519
Query: 346 NAIADGQVCSLL 357
N ++G++ L+
Sbjct: 520 NPSSNGKIPCLV 531
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q + G+ L + G+V+ +G++ G +G + ++ P+LVES
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTD--EDISRPKLVES 302
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V A G F T ++ G +Y +WG N LGH + P + G LE
Sbjct: 303 LAVSNVEYIACGEFHTCAVTASGDLY--NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG 360
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + ALA S V++ G G G LGHG+R + +P+ +E L +
Sbjct: 361 LQVLSVACG-SWHSALAM--SSGKVFTFGDGTFGALGHGNRENVAYPKEVES--LSGFRT 415
Query: 262 VVVAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A + Q G ++ TWG G LGHG++E VP VVQAL D
Sbjct: 416 MKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN 475
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G T ++ G V++ G LG N ADG+
Sbjct: 476 NFHQVACGYSMTIALATSGHVFTMGSSNYGQLG-NPKADGK 515
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 154/296 (52%), Gaps = 23/296 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ AVT+ G +Y++G S +G LGHG W P+ + L+G++++
Sbjct: 307 NVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSV 366
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G+ + L +G+V+ FG +FG +G + V P+ VESL ++ A G +
Sbjct: 367 ACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKEVESLSGFRTMKVACGVWH 424
Query: 161 TAVL----SREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+A + S+ G +++T+ G+ RLGH + + P + ++N Q+A G
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN-NFHQVACG 483
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
Y +ALA SG V+++G G+LG+ + D K P + Q +L + ++ G++H
Sbjct: 484 YSMTIALAT--SGH-VFTMGSSNYGQLGN-PKADGKQPCQV-QDKLSSELVEEISCGSYH 538
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
AV+ V TWG G G LGHG E + P +V AL D +A G ++TT +
Sbjct: 539 VAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCI 594
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 21/324 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT E+ RP+ + SL + A G
Sbjct: 258 QISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFH 317
Query: 107 TMLISDAGQVYAFGKDSF--GEAEYGVQGT----KLVTSPQLVESLKNIFVVQAAIGNFF 160
T ++ +G +Y +G S+ G +G+ + K V+ P L+ + V+ A G++
Sbjct: 318 TCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP-----LEGLQVLSVACGSWH 372
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A+ G+V+TF G LGH N P + +L +++A G + A+
Sbjct: 373 SALAMSSGKVFTFGDGTFGALGHGNRENVAYPKE-VESLSGFRTMKVACGVWHSAAIVET 431
Query: 221 PSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
S V ++ G G +LGHG + P +++ N VA G
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQ--VACGYSMTIA 489
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G V T G YG LG+ + + +V L+ ++ G Y V++ +VY
Sbjct: 490 LATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVY 549
Query: 334 SFGCGESASLGHNAIADGQVCSLL 357
++G G + LGH I D + +++
Sbjct: 550 TWGMGANGRLGHGGIEDKKKPTIV 573
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 28/256 (10%)
Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
I G VY +G+ S G + T ++ P+ +ES + V Q + G+ A+
Sbjct: 210 IESLGDVYVWGEVWTDVIPSEGSSNLVCSKTDVLI-PKPLESDVVLDVQQISCGSRHIAL 268
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+R+G V+T WG + RLGH T+ D+ L+ +L V IA G + A+
Sbjct: 269 TTRQGEVFT--WGEELGGRLGHGTD-EDISRPKLVESLAVSNVEYIACGEFHTCAVTA-- 323
Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG +Y+ G G G LGHG P+ + L LQ + VA G+WH+A+ G+
Sbjct: 324 SG-DLYNWGDGSYNAGLLGHGIGASHWLPKRVSG-PLEGLQVLSVACGSWHSALAMSSGK 381
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
V T+G G +G LGHGN E + PK V++L+ + + VA G + + + E
Sbjct: 382 VFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVS 441
Query: 330 GDVYSFGCGESASLGH 345
++++G G+ LGH
Sbjct: 442 RKLFTWGDGDKNRLGH 457
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 19/320 (5%)
Query: 42 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
R + + I+ G HS +T G +Y+FGSN GQLG G + +P ++SL+ +
Sbjct: 34 RNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV 93
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G T++ + AG++Y+FG S G + G + TSPQL+ + + + +A G
Sbjct: 94 ACGRSHTIVCTKAGRLYSFGAGSDG--QLGTGDAQCATSPQLINLPEQKYKLLSA-GTDH 150
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A L+ +G +Y + G++ +LG + P L + V ++ GY Y A+
Sbjct: 151 SAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL---KFHSSVSWVSCGY-YHTAIVTD 206
Query: 221 PSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+Y+ G GKLG D P+ +E + + +VA G H AV+ G
Sbjct: 207 DG--KLYTFGEKEFGKLGLTEDQLEDTTTPKHVES---ITEKIKLVACGGAHTAVISDVG 261
Query: 279 RVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
+ T+G G +G LG+G + S+P+ V L++ K +V+ GD T V++E G +Y+FG
Sbjct: 262 NLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGD 321
Query: 338 GESASLGHNAIADGQVCSLL 357
G LG I++ C++
Sbjct: 322 GRHGKLG---ISEEDFCNIF 338
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 23/236 (9%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I + G ++ FGK F + P ++N + + G+ +A+++ GR
Sbjct: 9 IPETGAIFTFGKSRFAD-----------NLPSKFW-IRNDKAMHISCGDEHSAIITESGR 56
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+YTF + +LG H +P +P + +L+ V +A G + + C +G +YS
Sbjct: 57 LYTFGSNDWGQLGLGHMKPT-TKP-GCVKSLKQEGVNLVACGRSH--TIVCTKAGR-LYS 111
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G+LG G P+LI L + +++AG H+A + DG + WG G
Sbjct: 112 FGAGSDGQLGTGDAQCATSPQLI---NLPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSE 168
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG GN + PK ++ + V V+ G Y T +V++DG +Y+FG E LG
Sbjct: 169 GQLGLGNTDSVETPKELKFHSSVSW--VSCGYYHTAIVTDDGKLYTFGEKEFGKLG 222
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVRQISAG 4351
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 23/299 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
+G H++ + + G V+S GSN +G+LG G +E + P+ +RIIQ +AG +M
Sbjct: 54 SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+SD G+++A+G +S G + + G L++ +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
GRV+ + +D R+ H P +VE ++P++QI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG+ + D +PR + + VVV G H+ + +GRV + G
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++ G+V+ +G+ S G + SP VE ++ ++Q + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
G ++ + + +LG+ T + + P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266
Query: 225 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V+S G G+LG G SR+ + E +L +A G H VV +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+G G LGHGN + P+++ ++ +V ++
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 390 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 444
Query: 263 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N DG++ L+
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLV 550
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 384
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 444
Query: 315 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
V+ G + T V E G ++++G G+ LGH
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH 487
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 154/307 (50%), Gaps = 21/307 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H++ +T+ G VY+ GSN QLGH + RP I L+ I Q A G+
Sbjct: 39 NQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELEDYVITQIACGSR 96
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +++ GQV ++G + G+ + ++ P++V L + VVQ A GN + L+
Sbjct: 97 HSMALTEWGQVLSWGDNECGQLGHA-SDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT 155
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEP--HPL-LGTLENIPVVQIAAG--YCYLLALA 218
G +Y SWG++ +LG + P+++ +P+ L TL IP IA G + +L++
Sbjct: 156 CCGELY--SWGSNIYGQLGVKS-PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLIS-- 210
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEG 265
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325
Query: 338 GESASLG 344
G S LG
Sbjct: 326 GSSGQLG 332
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 13/265 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
+Q G HS+A+T G V S+G N GQLGH + ++ + P+ +R L ++Q A G
Sbjct: 89 TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGN 148
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFT 161
++ ++ G++Y++G + +G + GV+ ++ P + +L I A G T
Sbjct: 149 NHSLALTCCGELYSWGSNIYG--QLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHT 206
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320
Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG N + ++P+VV
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQVV 345
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G+ S GQLG G E+E P I + Q A G T+ ++ +G+VYA G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGS 62
Query: 122 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
+ +Y G +L T P + L++ + Q A G+ + L+ G+V SWG++
Sbjct: 63 N-----DYSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQV--LSWGDNEC 115
Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH ++ + ++ ++ L + VVQIA G + LAL C +YS G + G+LG
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC---CGELYSWGSNIYGQLG 172
Query: 239 HGSRTDE---KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGH 293
S ++ +P + LL + +A G H ++ + V +GWGR C LG
Sbjct: 173 VKSPSELSQCNYPMRLTT--LLGIPAAAIACGGNHTFLISKSSAV--FGWGRNNCGQLGL 228
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 280
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G H+ ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 198 AIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 257
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTISQVACGNRHTLALVP 315
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y F G+ +LG + P ++G
Sbjct: 316 SRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIG 347
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V Q+A G+ + L L SG VY+ G +LGH T K P I + + +
Sbjct: 38 VNQVACGHRHTLFLTA--SG-KVYACGSNDYSQLGHELPT--KRPLQIPELE--DYVITQ 90
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 322
+A G+ H+ + + G+V +WG G LGH +++ +PK+V+ L + +A G+
Sbjct: 91 IACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNH 150
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ G++YS+G LG + ++ C+
Sbjct: 151 SLALTCCGELYSWGSNIYGQLGVKSPSELSQCN 183
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 390 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 444
Query: 263 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N DG++ L+
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLV 550
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 384
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 444
Query: 315 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
V+ G + T V E G ++++G G+ LGH
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH 487
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 155/345 (44%), Gaps = 61/345 (17%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +TS G V S GSN QLG + +P P+ +LQ +RI+Q G
Sbjct: 55 QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT--KPEPVTALQCLRIVQVCCGQQH 112
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M +++AGQVY +G +S G+ G +G + SP+ V++L VVQ A G+ L
Sbjct: 113 SMALTEAGQVYMWGSNSKGQLGNG-EGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171
Query: 167 EGRVYTFSWGNDAR----LGHHTEPN--DVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
G +Y +WG++ +G EP VE LLG +P+ QIA G + + L+
Sbjct: 172 NGALY--AWGDNGNGQLGIGTVGEPQRVPVEVTNLLG----LPLSQIACGANHSMVLS-- 223
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
SG+ ++ G G+LG D P L++ + +++ +AAG H+A + G V
Sbjct: 224 KSGV-IFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVK--FIAAGGAHSAALTAHGGV 280
Query: 281 CTWGW----------------------------------------GRYGCLGHGNEECES 300
T+GW G YG LGHG++ +
Sbjct: 281 FTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQL 340
Query: 301 VPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 344
P +Q L +A G +T G V++FG G + LG
Sbjct: 341 TPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
FG+ +SG+LG G E+ PR I L+GIR+ Q A GA T++++ G+V + G +
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH- 183
+ V TK P+ V +L+ + +VQ G + L+ G+VY + + +LG+
Sbjct: 81 DQLGQEVSTTK----PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNG 136
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ + + P + TL VVQIA G + LAL + A+Y+ G G+LG G+
Sbjct: 137 EGQESRLSPR-FVKTLAPFTVVQIACGSNHCLALL---NNGALYAWGDNGNGQLGIGT-V 191
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
E +E LL L +A GA H+ V+ + G + WG R+G LG + + + P
Sbjct: 192 GEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPT 251
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+++ L +A G + ++ G V++FG
Sbjct: 252 LLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G HS+ ++ GV++ +GSN GQLG ++ P +++L+ + AAG
Sbjct: 210 SQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGA 269
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G V+ FG + E + ++P Q+A+ +++
Sbjct: 270 HSAALTAHGGVFTFGWSFYESHEVRISLRGTESNP------------QSALARKLFSLIE 317
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPS 222
RE S+G+ +LGH ++ + + P L+GT + QIA G C+ + A P+
Sbjct: 318 RE--FCRHSYGSYGQLGHGSKNDQLTPMKIQELMGT----TITQIALGRCHTVCYA--PT 369
Query: 223 GMAVYSVGCGLGGKLG 238
V++ G G G+LG
Sbjct: 370 VGKVFTFGLGGNGQLG 385
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
GLGG H R PR I Q + + ++ + A GA H V+ GRV + G + L
Sbjct: 30 GLGGIEDHIVRV----PRSIPQLEGIRVRQI--ATGAHHTLVLTSHGRVLSCGSNDHDQL 83
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G E + P+ V AL ++ + V G + ++E G VY +G LG+
Sbjct: 84 GQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN 135
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 636 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 684
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +++IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 685 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 740
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 741 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 800
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 801 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 836
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L II+ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 681 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 738
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 739 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 797
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 798 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 856
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 857 --VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 914
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 915 STHCLALTEDSEVHSWGSND 934
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 645 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 690
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 691 NIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 750
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 751 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 807
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 808 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH 888
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 756 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 815
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 816 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 873
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 874 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 921
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 763 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 820
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 821 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 876
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 931
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 868
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 869 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 927 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 676 SDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 735
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 736 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 794
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 8/340 (2%)
Query: 20 KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
K + GG ++ + E + + G V+ +G +Y+ G ++G+LG G
Sbjct: 2599 KDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGD 2658
Query: 80 TEEEWRPRPIRSLQGIRIIQAA--AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
P+ I L I + A +G + ++ G+V+++G+ G+ +G +
Sbjct: 2659 DNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHG--NCISL 2716
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P+L+E LK+ + A G+ +A ++ G +YT+ G RLGH P L+
Sbjct: 2717 DKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPK-LVQ 2775
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 257
L VVQ+A G +A G VYS G G GKLG G P +++ L
Sbjct: 2776 ALVGQRVVQVACGSRDAQTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGL 2834
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ + V GA + + + G V TWG G Y LGHGN+ P +V+ L K IHVA
Sbjct: 2835 GV--IQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVA 2892
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
G V++ G VY++G + G+ A + + SL+
Sbjct: 2893 VGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLV 2932
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 129/253 (50%), Gaps = 10/253 (3%)
Query: 88 PIR----SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+R S + I +I + A + ++ G VY++G G +G T P+L+
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHG--DTVSYDEPKLI 193
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
ESL + +V A G+ ++A LS G +YT+ GN RLGH +DV L+ TL+
Sbjct: 194 ESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNF-DDVLTPTLVTTLKGHT 252
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
VV +A G L SG+ V+S G G GKLG G K P+++++ LL++ V
Sbjct: 253 VVHVACGSGDSQTLCVTASGI-VFSWGDGDYGKLGRGGTDGSKTPKIVDK--LLDINVVK 309
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V G +A + G V TWG G LGHG+EE PKV+++L D K ++ G
Sbjct: 310 VFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHI 369
Query: 324 FVVSEDGDVYSFG 336
++ED VY +G
Sbjct: 370 LALTEDQFVYGWG 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +P+ I L+ RI A G+G +
Sbjct: 2683 SGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAA 2742
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ G++Y +G +G +G T+ T P+LV++L VVQ A G + T L+ +
Sbjct: 2743 IASNGELYTWGLGEYGRLGHGDTITQ--TRPKLVQALVGQRVVQVACGSRDAQTMALTTD 2800
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY++ G+ +LG P + L + V+Q+ G + LAL V+
Sbjct: 2801 GCVYSWGDGDFGKLGRGGSDGCYTPLAV-DRLNGLGVIQVECGAQFSLALT---KYGEVW 2856
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P L+E + + + VA GA H V G+V WG
Sbjct: 2857 TWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDND 2914
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G+G P +V L D + V+ G
Sbjct: 2915 HGQQGNGATSVNRKPSLVHDLEDARVNRVSCG 2946
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T G VYS+G+ G+LGHG T P+ I SL I+ A G+ + +S +
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSAS 217
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G+ ++G +G V +P LV +LK VV A G+ + L F
Sbjct: 218 GELYTWGRGNYGRLGHG--NFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 275
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 276 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGGQFSAALTAHGE---VYTWGK 331
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G +LGHGS ++P++IE + ++ + V G H + +D V WG YG +
Sbjct: 332 GDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 389
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
S P + L+ I +A+G +F
Sbjct: 390 DPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSF 422
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ A G + A L+++G VY++ G+ RLGH + EP L+ +L + +V IA
Sbjct: 149 MIASHADGKHYLA-LTQDGCVYSWGNGDGGRLGHGDTVSYDEPK-LIESLLDKNIVFIAC 206
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G Y AL+ SG +Y+ G G G+LGHG+ D P L+ + + V +G
Sbjct: 207 GSTYSAALSA--SG-ELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDS 263
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
V G V +WG G YG LG G + PK+V L D+ + V G + ++
Sbjct: 264 QTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAH 323
Query: 330 GDVYSFGCGESASLGH 345
G+VY++G G++ LGH
Sbjct: 324 GEVYTWGKGDAYRLGH 339
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 99/170 (58%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 207 GSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTL 266
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G F+A L+ G
Sbjct: 267 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHG 324
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ G+ RLGH +E + P ++ +L + + ++ G ++LAL
Sbjct: 325 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDKKIKDLSVGTTHILALT 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L C + + S+ G + HGS T ++P + F + + A H + Q
Sbjct: 108 LCCTERSLMILSLN-GNAYNMYHGSET--QYPLRVHGFSDKPITMIASHADGKHYLALTQ 164
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V +WG G G LGHG+ PK++++L D + +A G + +S G++Y++G
Sbjct: 165 DGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSASGELYTWG 224
Query: 337 CGESASLGHNAIAD 350
G LGH D
Sbjct: 225 RGNYGRLGHGNFDD 238
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G +
Sbjct: 260 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAA 319
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+VY +GK +G + + V P+++ESL++ + ++G L+ +
Sbjct: 320 LTAHGEVYTWGKGDAYRLGHGSE--EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF 377
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 378 VYGWGRNDYGQIDPTLGPVVSEP-TLCPTLSSKTVIGLASG 417
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 31/235 (13%)
Query: 131 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
+Q K++ +PQ +S V+ +G+ FT ++ E R + + +D
Sbjct: 2468 IQSLKIIVNPQ--DSSYMPCVIAVNVGDSFTNLV--EFRTISIRY------------SDT 2511
Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
L E P V+IA C + C+ G+ + +G + ++ L
Sbjct: 2512 SVTLLQDIKEYYPCVEIAIKQCRNGGIDCKIHGLRI------IGRQNMFENQLTTSVSFL 2565
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+++L Q + + Q V WG LG +P + L+
Sbjct: 2566 ASDWEVLQEQVAIQRS----TDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSK 2621
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC---SLLFLSIF 362
+K IH+A G T F+VS++G +Y+ G G + LG D VC ++ FLS F
Sbjct: 2622 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLG--DDNNVCEPKAIPFLSQF 2674
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+G T +P + L+ R+ + + G+ ++
Sbjct: 2894 GALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSI 2951
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--------WRPRPIRSLQGIRII 98
Q G HS+ + G V+S G+N QLGH + + W +S GI +I
Sbjct: 56 QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVI 115
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQA 154
A G + +++ G ++++G + +G+ GV+ +V P++ E +L NI VQ
Sbjct: 116 SVACGDAHCVALTNDGHLFSWGSNVYGQL--GVERMNVVAKARYPRIQEINLANI--VQI 171
Query: 155 AIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G N A+ S +G ++ + + +LG T + + P + L IP+ Q+AAG +
Sbjct: 172 ACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGP-TTVNKLMGIPICQLAAGASH 230
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
L L PSG V+ G + G++G + D +P L+ +LL Q V+ +A G +
Sbjct: 231 SLVLT--PSG-TVFGWGKNMFGQIGQNEQRDILYPSLV---KLLRTQKVIRLACGEDFSV 284
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
V G + T+G G YG LGHGN+ E PK V L + VA G T ++E+ +
Sbjct: 285 AVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITEN-KL 343
Query: 333 YSFGCGESASLG 344
Y+FG S LG
Sbjct: 344 YAFGLNTSGQLG 355
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 34/298 (11%)
Query: 68 GSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G+ S GQLG G EE +RSL ++I Q A G ++++ D G V++ G
Sbjct: 22 GNTSDGQLGLGGIAEE----NVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCG 77
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLK----------NIFVVQAAIGNFFTAVLSREGRV 170
+ F + G G K P L E+L I V+ A G+ L+ +G +
Sbjct: 78 NNDF--YQLGHDGIK--RKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHL 133
Query: 171 YTFSWGNDARLGHHTEPNDV---EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
FSWG++ E +V +P + + +VQIA G + LAL + + ++
Sbjct: 134 --FSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL--ESTDGVLH 189
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+R P + + L+ + +AAGA H+ V+ G V WG
Sbjct: 190 AWGLNDHGQLGIGTRESFIGPTTVNK--LMGIPICQLAAGASHSLVLTPSGTVFGWGKNM 247
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G +G + P +V+ L K I +A G+ + V+ G +++FG G LGH
Sbjct: 248 FGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGH 305
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 18/263 (6%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLSRE 167
LI + + G S G+ G + V S LVES KN + Q A G + +L +
Sbjct: 11 LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70
Query: 168 GRVYTFSWGNDARLGH---HTEPNDVEP-HPLLGTLEN---IPVVQIAAGYCYLLALACQ 220
G V++ + +LGH +PN E H + ++ I V+ +A G + +AL
Sbjct: 71 GSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALT-- 128
Query: 221 PSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQ 276
+ ++S G + G+LG ++PR I++ L N+ V +A G+ H+ A+
Sbjct: 129 -NDGHLFSWGSNVYGQLGVERMNVVAKARYPR-IQEINLANI--VQIACGSNHSLALEST 184
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG + WG +G LG G E P V L + +A G + V++ G V+ +G
Sbjct: 185 DGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWG 244
Query: 337 CGESASLGHNAIADGQVCSLLFL 359
+G N D SL+ L
Sbjct: 245 KNMFGQIGQNEQRDILYPSLVKL 267
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 22/287 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 465 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 514
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 515 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 572
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQPLAVTDNGQ-VWSW 630
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGHG EE PK+++AL K I VA G ++ED +V+S+G
Sbjct: 689 RLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 153/352 (43%), Gaps = 55/352 (15%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3683
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3684 KLYATGYGAG--GRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 3741
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ D +LGH P ++ +L VV IAAG + AC S +Y+ G G
Sbjct: 3742 WGEAEDGKLGHGNRSPCDRPR-VVESLRGTEVVDIAAGGAHS---ACVTSAGDLYTWGKG 3797
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--- 289
G+LGH D+ P+L+E Q + V +G + D V +WG G YG
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3857
Query: 290 ------C-----------------------------------LGHGNEECESVPKVVQAL 308
C LGHG+++ P+ VQ L
Sbjct: 3858 RGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGL 3917
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH---NAIADGQVCSLL 357
K I +ATG +E+G+VY++G + LG NAI ++ + L
Sbjct: 3918 QGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3969
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G + +
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEALQGKKVIDVAAGSTHCLAL 725
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 125/267 (46%), Gaps = 26/267 (9%)
Query: 88 PIRS--LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
PI+S L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V +G V +G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VYS+G G++ LGH
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGH 692
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 2697 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAV 2756
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2757 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2813
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2814 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2872
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2873 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2928
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2929 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2988
Query: 339 ESASLGH 345
+ G+
Sbjct: 2989 DHGQQGN 2995
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P + L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD V+++G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGR 640
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 28/285 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S+G VYS+G G+LGHG RPR + SL+G ++ AAG +
Sbjct: 3725 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSAC 3784
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 3785 VTSAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 3842
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
V+++ G+ +LG P V +G P PS
Sbjct: 3843 DTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPP-----------------PS 3885
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
+ G G +LGHGS + PR ++ Q + + +A G+ H ++G V T
Sbjct: 3886 WPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEEGEVYT 3943
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
WG G LG G P++V AL K VA G T S
Sbjct: 3944 WGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWS 3988
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H+ A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 2758 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2817
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
++ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 2818 LTSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2875
Query: 168 GRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 2876 GLVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2927
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHGS + P+++E + + V VA GA H V G+V
Sbjct: 2928 GV-VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDAGQVYA 2984
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 2985 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3021
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 11/261 (4%)
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 2692 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMS-SGTVPIPRQVTALSSYV 2750
Query: 151 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 2809
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + AL S +Y+ G G G+LGHG T + P++++ LL + + VA G+
Sbjct: 2810 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGS 2864
Query: 269 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
A + +G V +WG G +G LG G E +VP+ ++ LN + G + +
Sbjct: 2865 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2924
Query: 327 SEDGDVYSFGCGESASLGHNA 347
++ G V+++G G+ LGH +
Sbjct: 2925 TKSGVVWTWGKGDYFRLGHGS 2945
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ P E+L + VVQ A G+ ++ EG+VY + RLG V +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L + V ++A A A G V+S G G GKLGH SR + PRLIE +
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 2802
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L + I V
Sbjct: 2803 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2860
Query: 317 ATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
A G D T ++++G V+S+G G+ LG
Sbjct: 2861 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 2891
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--SRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ L +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQPLAVTDN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEALQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
N++C+ P ++ L+ + +A G +F S
Sbjct: 736 ------NNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWS 778
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 24 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 83
G S + L+AG + + +G +AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGC 646
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 202
E+L+ V+ A G+ L+ + V+ SWGN+ + H + +P P LL L+
Sbjct: 705 EALQGKKVIDVAAGSTHCLALTEDSEVH--SWGNNDQCQHFDTLHQTKPEPSLLPGLDTK 762
Query: 203 PVVQIAAG 210
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2906 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2960
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2961 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3018
Query: 155 AIGN 158
A G+
Sbjct: 3019 ACGS 3022
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 2972 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3026
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 20/279 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L + G+V+A+G++ G +G ++ P+LVE+
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 291
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH + P + G LE +
Sbjct: 292 LAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQ 351
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ ++ G + A S V++ G G G LGHG+R +P+ +E L + +
Sbjct: 352 VLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVET--LSGFRTIK 406
Query: 264 VAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
VA G WH+A + Q G ++ TWG G LGHG+++ VP VQ+L D
Sbjct: 407 VACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNF 466
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G T +S G V++ G + LG N +DG+
Sbjct: 467 HQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDGK 504
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 26/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T+ G +Y++G ++G LGHG W P+ + L+G++++ + G+ +
Sbjct: 303 GEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHS 362
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
L + +G+V+ FG +FG +G + T V P+ VE+L ++ A G + +A
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHT--VAYPKEVETLSGFRTIKVACGLWHSAAIVET 420
Query: 163 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
V+SR +++T+ G+ LGH + + P + +L + Q+A G+ +
Sbjct: 421 TNQAGVNVISR--KLFTWGAGDKNPLGHGDKDARLVP-TCVQSLIDYNFHQVACGHSMTI 477
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL+ SG V+++G G+LG+ ++D KHP + Q +L ++ G+ H AV+
Sbjct: 478 ALST--SGH-VFTMGSSSNGQLGN-PKSDGKHPTPV-QDRLAGELVEEISCGSCHVAVLT 532
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG E + P +V+AL D +A G ++TT +
Sbjct: 533 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
I G VY +G+ + G A Y ++ P+ +ES + V Q A G A+
Sbjct: 199 IESLGDVYVWGEVWTDMIPAEGSANYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 257
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+R+G V F+WG + RLGH T+ + P L+ L V +A G + A+
Sbjct: 258 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYVACGEFHTCAITA-- 312
Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG +Y+ G G G LGHG+ T P+ + L +Q + V+ G+WH+A+ G+
Sbjct: 313 SG-DLYTWGDGYYNAGLLGHGAGTSHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 370
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 331
V T+G G +G LGHGN + PK V+ L+ + I VA G + + + E +
Sbjct: 371 VFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430
Query: 332 --VYSFGCGESASLGHNAIADGQVCSLLFLSIFQY 364
++++G G+ LGH D ++ S+ Y
Sbjct: 431 RKLFTWGAGDKNPLGHGD-KDARLVPTCVQSLIDY 464
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 21/324 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT + RP+ + +L + A G
Sbjct: 247 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFH 306
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T I+ +G +Y +G + G GT ++ L+ + V+ + G++ +A+ +
Sbjct: 307 TCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTT 366
Query: 166 REGRVYTFSWGNDARLGH---HT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--A 218
G+V+TF G LGH HT P +VE TL +++A G + A+
Sbjct: 367 SSGKVFTFGDGTFGALGHGNRHTVAYPKEVE------TLSGFRTIKVACGLWHSAAIVET 420
Query: 219 CQPSGMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+G+ V ++ G G LGHG + P ++ N VA G
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQ--VACGHSMTIA 478
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G V T G G LG+ + + V L ++ G V++ +VY
Sbjct: 479 LSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVY 538
Query: 334 SFGCGESASLGHNAIADGQVCSLL 357
++G G + LGH + D + +L+
Sbjct: 539 TWGMGANGRLGHGGVEDKKKPTLV 562
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 23/299 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
+G H++ + + G V+S GSN +G+LG G +E + P+ +RIIQ +AG +M
Sbjct: 54 SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+SD G+++A+G +S G + + G L++ +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
GRV+ + +D R+ H P +VE ++P++QI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG+ + D +PR + + VVV G H+ + +GRV + G
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++ G+V+ +G+ S G + SP VE ++ ++Q + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
G ++ + + +LG+ T + + P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266
Query: 225 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V+S G G+LG G SR+ + E +L +A G H VV +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+G G LGHGN + P+++ ++ +V ++
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y++G S++ G LG+ W P+ + L+GI + + G T
Sbjct: 365 GEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHT 424
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ +GQ++ FG +FG +G + + V++P+ VESLK + V+AA G + TA +
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEV 482
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + + P + L Q+A G+ +
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHSMTV 541
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ + D K P +E N + GA+H AV+
Sbjct: 542 ALT---TTGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEEL-DCGAYHVAVLT 596
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + S P +V+AL D + V G T +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+++G++ G +GV V P+LV+
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VLHPKLVDG 353
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
LKN V A G + + ++ G +YT WG + LG+ E ++ P L G LE
Sbjct: 354 LKNTNVELVACGEYHSCAVTLSGDLYT--WGGSSHNCGLLGYRNEASNWVPKKLNGPLEG 411
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V ++ G + + S +++ G G G LGHG R PR +E + L+
Sbjct: 412 IHVAAVSCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLK--GLRT 466
Query: 262 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 467 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALV 526
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ VA G T ++ G VY+ G LG N ADG++
Sbjct: 527 EPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLG-NPQADGKL 569
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G T +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAV 479
Query: 111 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G+++ +G G +G + ++LV P V +L Q A G+
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 537
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT +LG + + + P + G L V ++ G ++ L
Sbjct: 538 SMTVALTTTGHVYTMGSPVYGQLG-NPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLT 596
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 273
S VY+ G G G+LGHG D P ++E + ++ VV AA H V
Sbjct: 597 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAICLHKWV 653
Query: 274 VGQDGRVCT 282
G D +C+
Sbjct: 654 SGIDQSMCS 662
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 17/320 (5%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E QA +G HS+ + S G ++S+G NS GQLG + + +P+ I +L+ +R+ + G
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + G+V+A+G S G+ G + ++ P+ +++L +I ++Q + G+ +
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142
Query: 164 LSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
LS +GR++T+ + +LG E P+ P + L+ IP+ Q+AAG + AL+ S
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECPSQASPQ-RVQFLDGIPLTQVAAGGAHSFALSL--S 199
Query: 223 GMAVYSVGCGLGGKLGHGSRT----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G A + G G+L + P ++ + NL V ++ G H AV+ Q G
Sbjct: 200 G-ASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALE--NLGVVYISCGYEHTAVLTQTG 256
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG- 336
+V T+G YG LG+ + P++V+ ++ + + + G Y T V G V SFG
Sbjct: 257 KVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFGR 315
Query: 337 --CGESASLGHNAIADGQVC 354
C +S+ A + C
Sbjct: 316 GPCCKSSPTHPEAPTENFTC 335
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 20/276 (7%)
Query: 85 RPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 140
RP P+R G + QAA+G ++L+ G+++++G +S G+ G + + P
Sbjct: 9 RPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQP 66
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 199
+ + +L+ + V + G + + +GRV+ + G++ +LG E N++ P + TL
Sbjct: 67 KRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFNEINLIPRKIKTL 125
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLN 258
+I ++Q++ G+ + LAL+ +++ G G+LG G + P+ + Q L+
Sbjct: 126 TDIKIIQVSCGHHHSLALS---EDGRLFTWGSNSHGQLGLGKECPSQASPQRV---QFLD 179
Query: 259 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC----ESVPKVVQALNDVKA 313
P+ VAAG H+ + G WG G L + S P V AL ++
Sbjct: 180 GIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGV 239
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++++ G T V+++ G V++FG LG++ A
Sbjct: 240 VYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTA 275
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 138/288 (47%), Gaps = 11/288 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G + V+ VY +GSNSS QL GT E+ +P+ + I+A G T +IS
Sbjct: 363 GENPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--GQYCTFVIST 420
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
G V A GK S+G G + E ++I V ++ G + T + EG V+
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LGH P + GTL+ VV ++AGY + A+ +Y+ G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT---EDGELYTWGE 537
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 538 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG 641
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4071
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4072 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4129
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + + Q+A G + LA++ G
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSA--DG 4186
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4187 SLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4244
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P++V L + +A G T +S G+VY++G L
Sbjct: 4245 GQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQL 4304
Query: 344 G 344
G
Sbjct: 4305 G 4305
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 26/326 (7%)
Query: 32 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRP 86
+ L A C + AG + +++ G V + G S G+LG G +T ++
Sbjct: 392 KILQPKLAPCFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-S 145
P RS++ ++ + G T+ + G+V+++G +G+ +G T+ P+L++ +
Sbjct: 452 EPHRSIK--KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGT 507
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ VV + G +A ++ +G +YT+ G+ RLGH + N L+ + N V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VG 564
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
+++ G + +AL+ G V+S G G GKLGHG P+++E Q + + V
Sbjct: 565 EVSCGSSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKV--C 620
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTF 324
AG+ + + G+V WG G CLG G+ E ++ PK+++ L + + ++ GD
Sbjct: 621 AGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCL 678
Query: 325 VVSEDGDVYSFG------CGESASLG 344
+S D +VY++G CG+ S G
Sbjct: 679 ALSHDNEVYAWGNNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 143/281 (50%), Gaps = 16/281 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
++ S + GH++A T++G V+S+G G+LGHG + + P+ I+ +LQG ++ +
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVS 517
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHT 573
Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
LS++GR V++F G++ +LG H + N V ++ L+ + ++ AG LAL
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALT-- 630
Query: 221 PSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S VY+ GC G LG G S P+LIE+ + V ++ G H + D
Sbjct: 631 -STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDSHCLALSHDNE 685
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
V WG G G GN + PK V L+ V ++ G
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+G ++S+ +VY +G +S + G Q + + P+L + ++A G + T V
Sbjct: 362 SGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPCFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGTLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4073 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4132
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + + Q A G T +S +G V+
Sbjct: 4133 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGLHIGQVACGLNHTLAVSADGSLVW 4190
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4191 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4246
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+L+ LL + +A GA H + G V WG G L
Sbjct: 4247 DRLIGLPEGRARNHNRPQLVP--VLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQL 4304
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V AL ++ G
Sbjct: 4305 GLGHTNHVREPTLVTALQGKNIRQISAG 4332
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G+ I
Sbjct: 4110 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHI 4169
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4170 GQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4227
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P L+ L I + IA
Sbjct: 4228 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQ------LVPVLLGIFIDDIAV 4279
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---A 266
G + LAL+ SG VY+ G G+LG G + P L+ Q N++ + +
Sbjct: 4280 GAEHTLALSA--SG-EVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHS 4336
Query: 267 GAWHAAVV 274
AW AA V
Sbjct: 4337 AAWTAAPV 4344
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ + Q G T V+ G V G+ RLG +D+
Sbjct: 3990 QLAEAGRNVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4048
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4049 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4103
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4104 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 4161
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4162 TALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLG 4201
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4022 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4081
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4082 GEVFSWGDGDYGKLGH 4097
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMAL 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 159/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD + D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P++ S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKMALSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNIRQISAG 4351
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ L
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSXCLALRH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G ++++G LGHG W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L++ GQ++ FG +FG +G + V P+ VESL + + AA G + TA +
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGDREN--VAYPREVESLSGLRTIAAACGVWHTAAVVEV 457
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 458 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSLTVG 516
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V+++G + G+LG+ D K P L+E +L +A GA+H AV+
Sbjct: 517 LTT--SGH-VFAMGSTVYGQLGN-PYADGKLPCLVED-KLSGESVEEIACGAYHVAVLTS 571
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E P +V+AL D ++A G +YT +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAI 621
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 329 LAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL- 387
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
Q+A+ C A S +++ G G G LGHG R + +PR +E L L+ +
Sbjct: 388 --QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVE--SLSGLRTIA 443
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
A G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 444 AACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 503
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N ADG++ L+
Sbjct: 504 FHKIACGHSLTVGLTTSGHVFAMGSTVYGQLG-NPYADGKLPCLV 547
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAS 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ ++N+ V + G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD--IINVGEV--SCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4208
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4266
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L V +A G T +S GDVY++G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326
Query: 344 G 344
G
Sbjct: 4327 G 4327
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDIIN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLASSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ + +V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4192 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4249
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V PLL + + IA
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PLLA---GVFIEDIAV 4301
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LAL+ S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4302 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4356
Query: 270 HAA 272
H+A
Sbjct: 4357 HSA 4359
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4095 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4154
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTVAVSTDGSMVW 4212
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4213 AFGDGDYGKLGLGNSTAKSSPQK-VDILCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4268
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + + ++ + V GA H + G V WG G L
Sbjct: 4269 DRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAV--GAEHTLALSSTGDVYAWGSNSEGQL 4326
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4327 GLGHTNHVREPTLVTVLQGKNVRQISAG 4354
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 29 LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPR 87
LV + GE C G H+IA++ G V+SFG +G+LGHG T ++P+
Sbjct: 556 LVKDIINVGEVSC---------GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPK 606
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVE 144
I +LQG+ I + AG+ ++ ++ GQVYA+G + G +E T L P+L+E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIE 660
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
L +V +IG+ LS + VY +WGN++ + G + +G L+ I
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPITKPKKVGGLDGI 718
Query: 203 PVVQIAAGYCYLLALACQPSGMAV 226
+ QI+AG + LA P V
Sbjct: 719 AIQQISAGTSHSLAWTALPRDRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ + AA G T V+ G V G+ RLG +D+
Sbjct: 4012 QLAEAGRNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4070
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4071 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4125
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4126 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 4183
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4184 TALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4223
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4044 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4103
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4104 GEVFSWGDGDYGKLGH 4119
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4214
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4272
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 344 G 344
G
Sbjct: 4333 G 4333
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4362
Query: 270 HAA 272
H+A
Sbjct: 4363 HSA 4365
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4101 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4218
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4219 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4274
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4275 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNVRQISAG 4360
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4018 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4076
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4077 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4131
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4132 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4189
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4190 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4050 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4109
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4110 GEVFSWGDGDYGKLGH 4125
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 602 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 661
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 662 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 719
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 720 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 767
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+++
Sbjct: 527 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVI 584
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 585 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 643
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 644 KGLKVIDVACGSGDAQTLAVTDNGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 702
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 703 --VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 760
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 761 STHCLALTEDSEVHSWGSND 780
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 482 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 530
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 531 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 586
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 587 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 646
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+++G V+S+G G+ LG
Sbjct: 647 KVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGR 682
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 143
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 530
Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 198
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 531 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 590
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 591 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 647
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V +G V +G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 648 VIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 707
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGH 345
G + +++DG VYS+G G++ LGH
Sbjct: 708 GSQFSIALTKDGQVYSWGKGDNQRLGH 734
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 549 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 608
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 609 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTDN 666
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 667 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 722
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 777
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 327
N++C+ P + L+ + +A G +F S
Sbjct: 778 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 820
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 714
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 773 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 812
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 522 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 581
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 582 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 640
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 13/307 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 83 EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRK--RLQLILGLDAFVFKKAACG 140
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 162
A T+ +++ GQ++++G +S E + G+ + SP++V++L +VQ A G
Sbjct: 141 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHAL 198
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L+ G +Y++ ++ +LG + L+ TL +P+ IA G + ++A S
Sbjct: 199 ALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYH--SIAISKS 256
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVC 281
G A++ G G+LG D ++ L Q Q L V AA G + + DG V
Sbjct: 257 G-AIFGWGKNTFGQLG---LNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVF 312
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 313 TCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 372
Query: 341 ASLGHNA 347
LG+N+
Sbjct: 373 GQLGNNS 379
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
+A G H+IAV G ++S+GSNS GQLG + E PR +++L I+Q A G
Sbjct: 135 KKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGM 194
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y++G +S G+ GV + P+L+ +L + + A G + + +
Sbjct: 195 KHALALTNNGELYSWGSNSEGQLGLGVD-IRCEMKPKLINTLAGVPIAFIACGGYHSIAI 253
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
S+ G + F WG + +LG + N P+ L TL N V A G + + L
Sbjct: 254 SKSGAI--FGWGKNTFGQLGLNDTQNRNLPYQL-QTLRNAKVCYAACGEEFSVFLTVDG- 309
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G+ G+LGHGS +E PR + +L+ ++ G H A+V GRV
Sbjct: 310 --GVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVTQISCGKRHTLALVPSQGRVY 365
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQ 306
WG G G LG+ + + P+VV+
Sbjct: 366 AWGLGGAGQLGNNSTRSTTTPQVVR 390
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 22/311 (7%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
++ K ++ +G+ G+LG G E+E P + + I Q A G T++I+ G
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
++Y+ G + +G+ + QG K + QL+ L +AA G + T ++ G++ FS
Sbjct: 102 KIYSCGNNDYGQLGHE-QGRKRL---QLILGLDAFVFKKAACGAYHTIAVNEWGQL--FS 155
Query: 175 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
WG+++ +LG +++ N +E P ++ TL +VQIA G + LAL + +YS G
Sbjct: 156 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQIACGMKHALALT---NNGELYSWGS 211
Query: 232 GLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G E P+LI L + +A G +H+ + + G + WG +G
Sbjct: 212 NSEGQLGLGVDIRCEMKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----N 346
LG + + ++P +Q L + K + A G+ + ++ DG V++ G G LGH N
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 329
Query: 347 AIADGQVCSLL 357
I QV L+
Sbjct: 330 EILPRQVMELM 340
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HSIA++ G ++ +G N+ GQLG T+ P +++L+ ++ AA G ++ ++
Sbjct: 249 HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD 308
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T A++ +GRVY
Sbjct: 309 GGVFTCGAGMYGQLGHGSNNNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYA 366
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG+++ + P + G
Sbjct: 367 WGLGGAGQLGNNSTRSTTTPQVVRG 391
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 639
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 464 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 513
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 514 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 571
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 629
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH 691
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 735 ------SNDQCQ 740
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 17/303 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K ++ +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 221
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 222 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
S + G G+L G + + + L NL V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 339
T+G R G LG+ + P++V+ ++ + + V G Y T V G V SFG G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316
Query: 340 SAS 342
S +
Sbjct: 317 SDT 319
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ G T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
GA T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG 176
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%), Gaps = 7/298 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G H++ + + V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +V FSWG ++ +LG E + + +LE IPV Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSF 203
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
S G G + P I + NL + ++ G H AV+ QDG+V T+G
Sbjct: 204 GWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFTFG 261
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G LG+ + P++V+ ++ + + GD+T V G V SFG G S +
Sbjct: 262 DNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGHGPSDT 319
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + + SPQ V SL+ I V Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKELSS-QASPQRVRSLEGIPVAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG+ ++ P+++E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECE----SVPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 15/259 (5%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSSVHSCGENSRGQ--LGRRGAPRGDLPEPVQALKTLKFNL 79
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 212
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKITTLTGIKIIQVSCGHY 138
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV-VAAGAWH 270
+ LAL+ V+S G G+LG G + + P+ + + + PV VAAG H
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI---PVAQVAAGGAH 192
Query: 271 AAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ + G WG G L G + + P + AL ++ I+++ GD T V+S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252
Query: 328 EDGDVYSFGCGESASLGHN 346
+DG V++FG S LG+N
Sbjct: 253 QDGKVFTFGDNSSGQLGYN 271
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T ++S G+V+ FG +S G+ Y K PQ+VE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKK--RGPQIVERIDGLVSQIDCGGDHTIA 301
Query: 163 VLSREGRVYTFSWG-NDARLGHHTE 186
+ G+V +F G +D H E
Sbjct: 302 YVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G+ L + G+V+ +G++ G +G + P+LVES
Sbjct: 252 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 309
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V A G F T V++ G +Y WG N LGH T + P + G LE
Sbjct: 310 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 367
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + A S +++ G G G LGHG R +P+ +E L +
Sbjct: 368 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 422
Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A + ++ TWG G LGHG++E + VP VQAL D
Sbjct: 423 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 482
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G T ++ G V++ G + LG N ADG+
Sbjct: 483 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK 522
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 314 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 373
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 374 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 431
Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 490
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ +ALA + V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 491 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 545
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 546 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 28/256 (10%)
Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
I G VY +G+ S G + Y T + P+ +ES + V Q A G+ +
Sbjct: 217 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 275
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+R+G V+T WG + RLGH T+ + P L+ +L V IA G + +
Sbjct: 276 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 330
Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG +Y G G G LGHG+ P+ + L LQ + VA G+WH+A+ G+
Sbjct: 331 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 388
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
+ T+G G +G LGHG+ E + PK V+AL+ +A+ VA G + + + E
Sbjct: 389 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 448
Query: 330 GDVYSFGCGESASLGH 345
++++G G+ LGH
Sbjct: 449 RKLFTWGDGDKNRLGH 464
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 25/326 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT + RP+ + SL + A G
Sbjct: 265 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 324
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNF 159
T +++ +G +Y +G S+ G GT K V+ P L+ + V+ A G++
Sbjct: 325 TCVVTASGDLYDWGDGSYNAGLLG-HGTGVSHWLPKRVSGP-----LEGLQVLSVACGSW 378
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A+ G+++TF G LGH + P + L +++A G + A+
Sbjct: 379 HSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA-LSGFRAMKVACGVWHSAAIV- 436
Query: 220 QPSGMA--------VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ SG A +++ G G +LGHG + + P ++ N VA G
Sbjct: 437 EISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQ--VACGHSMT 494
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ G V T G G LG+ + + V L + ++ G ++ +
Sbjct: 495 VALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSE 554
Query: 332 VYSFGCGESASLGHNAIADGQVCSLL 357
VY++G G + LGH ++ D + +L+
Sbjct: 555 VYTWGMGANGRLGHGSVEDKKKPTLV 580
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 12/298 (4%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRII 98
C QA G H++ +T G ++S G+N GQLGH T RP+ I SL+ +
Sbjct: 33 CHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVT 92
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G ++ +++ GQV+++G +S G+ + + T+P++++++ VVQ A G
Sbjct: 93 HVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTD-LQTYTTPRMIKTIATKTVVQIASGQ 151
Query: 159 FFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
F + L+ G + FSWG + +LG T V L+ +L IP+ IA G + +
Sbjct: 152 FHSLALTNSGEL--FSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNH--S 207
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
A SG A++ G G+LG P+ ++ L NL ++ G +A + Q
Sbjct: 208 FAVSKSG-AIFGWGKNTFGQLGLNDLVSRCFPQQLKT--LRNLGVRYISCGDDFSAFLTQ 264
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
+G V T G G +G LGHG E +P++V L K +A G +T V G +Y
Sbjct: 265 EGGVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 15/301 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
VY +G+ G+LG G E+E PR + + QAA G T+L++ G++++ G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ G+ + PQ + SL+N V + G + L+ G+V FSWG+++
Sbjct: 63 NDHGQLGHDTDCLP-NKRPQFISSLENYIVTHVSCGTTHSLALTNWGQV--FSWGSNSIG 119
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH T+ ++ T+ VVQIA+G + LAL + ++S G G+LG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT---NSGELFSWGANGYGQLGL 176
Query: 240 GSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G+ T EK P L++ L + +A G H+ V + G + WG +G LG +
Sbjct: 177 GT-TGEKVVTPTLVKS--LAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLV 233
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
P+ ++ L ++ +++ GD + ++++G V++ G G LGH ++ + ++
Sbjct: 234 SRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMV 293
Query: 358 F 358
F
Sbjct: 294 F 294
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPV 262
V Q A G + L L ++S G G+LGH + K P+ I + N
Sbjct: 38 VQQAACGTSHTLLLT---KDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLE--NYIVT 92
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDY 321
V+ G H+ + G+V +WG G LGH + + + P++++ + + +A+G +
Sbjct: 93 HVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQF 152
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
+ ++ G+++S+G LG + V L S+
Sbjct: 153 HSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSL 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
MAVY G + G+LG G DE+ PR ++ ++Q A G H ++ +DG++
Sbjct: 1 MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQ--AACGTSHTLLLTKDGKLF 58
Query: 282 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ G +G LGH + +C P+ + +L + HV+ G + ++ G V+S+G
Sbjct: 59 SCGNNDHGQLGH-DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117
Query: 340 SASLGHNA 347
LGH+
Sbjct: 118 IGQLGHDT 125
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4085
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4086 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4143
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4200
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4258
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318
Query: 344 G 344
G
Sbjct: 4319 G 4319
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4124 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4183
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4184 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4241
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4242 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4293
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4294 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4348
Query: 270 HAA 272
H+A
Sbjct: 4349 HSA 4351
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4087 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4204
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4205 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4260
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4261 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4318
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4319 GLGHTNHVREPTLVTVLQGKNVRQISAG 4346
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4004 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4062
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4063 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4117
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4118 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4175
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4176 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4036 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4095
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4096 GEVFSWGDGDYGKLGH 4111
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V+++G+N+SGQLG GTT + P ++ L G+ + AAG ++
Sbjct: 205 AGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQGLSGV--VAVAAGHHHSLA 262
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+ +G++ + +G+ + P V+ L + V A G+ + + +G
Sbjct: 263 VRNDGTVWGWGRNDSNQLG---KGSMRLLVPAQVQGLSAVVAVAA--GDTHSLAVGSDGT 317
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ N+ +LG T + P P+L VV +AA + LA+ + V++
Sbjct: 318 VWAVGSNNNGQLGDGTTTYRLVPVPVLSG-----VVSVAANDYHSLAVRSDGT---VWAW 369
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ T P Q+ L VV V AG +H+ V DG WG Y
Sbjct: 370 GYNSTGQLGDGTTTTRLVP-----VQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAY 424
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G+ VP VQ L+ V A VA+G + + DG V+++G LG+
Sbjct: 425 GQLGDGSTTYLPVPVRVQQLSGVGA--VASGSSHSLALRSDGTVWTWGYNSFGQLGN 479
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTM 108
AG HS+A+ S G V+++G+NSSGQLG GTT P P++ +QG+ ++ AG+ ++
Sbjct: 3 AGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQ-VQGLSEVVAVDAGSSHSL 61
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G ++ G + G + T ++P V L + V A G+ L +G
Sbjct: 62 AVRSDGTVWAWGSNASG--QLGDETTISRSTPVQVLGLSGVLFVAA--GSSHVLALRYDG 117
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + + + G T N P G V+ +AAG + LA+ S ++
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG---VMAVAAGDNHSLAVRSDGS---AWA 171
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ ++ P ++ + V VAAG+ H+ V DG V WG
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSGV----VAVAAGSAHSLAVRSDGTVWAWGANAS 227
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G VP VQ L+ V A VA G + + V DG V+ +G +S LG ++
Sbjct: 228 GQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSM 285
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 20/253 (7%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AAG+ ++ + G V+A+G +S G+ G V P V+ L + V A G+
Sbjct: 2 AAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSSH 59
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ + +G V+ +WG++A +LG T + P +LG V+ +AAG ++LAL
Sbjct: 60 SLAVRSDGTVW--AWGSNASGQLGDETTISRSTPVQVLGLSG---VLFVAAGSSHVLALR 114
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 277
+ V++ G G+ G G+ + P Q L V+ VAAG H+ V D
Sbjct: 115 YDGT---VWAWGSNSSGQRGDGTTNNRALP-----VQAQGLSGVMAVAAGDNHSLAVRSD 166
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G WG G LG G P VQ L+ V A VA G + V DG V+++G
Sbjct: 167 GSAWAWGSNASGQLGEGTTSNRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGA 224
Query: 338 GESASLGHNAIAD 350
S LG D
Sbjct: 225 NASGQLGDGTTTD 237
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 16 RQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
R D Q GS +R L+ + AG HS+AV S G V++ GSN++GQL
Sbjct: 274 RNDSNQLGKGS----MRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQL 329
Query: 76 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
G GTT P P+ S ++ AA ++ + G V+A+G +S G+ G T+
Sbjct: 330 GDGTTTYRLVPVPVLS----GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTR 385
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE---PNDV 190
LV P V L + V A G + + + +G + WG++A +LG + P V
Sbjct: 386 LV--PVQVSGLSEVVSVVA--GGYHSLAVRSDGSAW--DWGSNAYGQLGDGSTTYLPVPV 439
Query: 191 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
L G V +A+G + LAL + V++ G G+LG+G
Sbjct: 440 RVQQLSG------VGAVASGSSHSLALRSDGT---VWTWGYNSFGQLGNG 480
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+AAG+ H+ + DG V WG G LG G VP VQ + + V G +
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 324 FVVSEDGDVYSFGCGESASLG 344
V DG V+++G S LG
Sbjct: 61 LAVRSDGTVWAWGSNASGQLG 81
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 17/303 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+A+G S E + G+ K ++ +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144
Query: 166 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 221
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 222 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
S + G G+L G + + + L NL V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 339
T+G R G LG+ + P++V+ ++ + + V G Y T V G V SFG G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316
Query: 340 SAS 342
S +
Sbjct: 317 SDT 319
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ G T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
GA T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG 176
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 19/311 (6%)
Query: 38 EACCR--RENSQAIAGP------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 342 EEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLA 401
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 402 PSFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI 459
Query: 150 FVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++
Sbjct: 460 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 519
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
AGY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 520 AGYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGS 572
Query: 269 WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 573 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 632
Query: 328 EDGDVYSFGCG 338
G VY++GCG
Sbjct: 633 STGQVYAWGCG 643
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4181
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4182 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4239
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + ++A G + L ++ G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPE-RVAALEGYQIGEVACGLNHTLVVSTD--G 4296
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4354
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V AL+ V +A G T +S GDVY++G L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414
Query: 344 G 344
G
Sbjct: 4415 G 4415
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 406 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 463
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 521
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 522 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 578
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 579 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 634
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 635 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 692
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 693 NNSMGQCGQGNSTG 706
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 365 GDAPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 420
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 421 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 473
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 474 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 531
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 532 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 589
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 590 GGDNGKLGH 598
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4220 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQI 4279
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ A G T+++S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4280 GEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4337
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V L + V IA
Sbjct: 4338 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALSGVFVEDIAV 4389
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LAL+ SG VY+ G G+LG G + P L+ Q +++ ++AG
Sbjct: 4390 GAEHTLALSA--SG-DVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQ--ISAGRC 4444
Query: 270 HAA 272
H+A
Sbjct: 4445 HSA 4447
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4183 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4242
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + + A G T V+S +G V+
Sbjct: 4243 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVAALEGYQIGEVACGLNHTLVVSTDGSMVW 4300
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4301 AFGDGDYGKLGLGNSTAKSSPQK-VDILCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4356
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + + ++ + V GA H + G V WG G L
Sbjct: 4357 DRLIGLPEGRARNHNRPQQVPALSGVFVEDIAV--GAEHTLALSASGDVYAWGSNSEGQL 4414
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V +L ++ G
Sbjct: 4415 GLGHTNHVREPTLVTSLQGKSVRQISAG 4442
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 571 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 630
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 631 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 684
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 685 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 740
Query: 223 GMAVYS 228
V +
Sbjct: 741 DRQVVA 746
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 116 VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +G G+ AE G SP ++ Q G T V+ G V
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSPSFCQA------QQVICGQNCTFVIQANGTVLACG 4143
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSV 229
G+ RLG +D+ ++ L+ V Q+ G+ ++A SG V+S
Sbjct: 4144 EGSYGRLGQGNS-DDLHVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSW 4197
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLGHG+ ++ PR IE Q + V ++ G H+AVV DG++ T+G G YG
Sbjct: 4198 GDGDYGKLGHGNSDRQRRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG 4255
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
LG GN + +P+ V AL + VA G T VVS DG V++FG G+ LG
Sbjct: 4256 RLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G VY+FG + L G RP+ + +L G+ + A GA T+ +
Sbjct: 4338 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLAL 4397
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
S +G VYA+G +S E + G+ T V P LV SL+ V Q + G +A S
Sbjct: 4398 SASGDVYAWGSNS--EGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWS 4450
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4132 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4191
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4192 GEVFSWGDGDYGKLGH 4207
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 630 TGQVYAWGCG 639
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 689 NNSMGQCGQGNSTG 702
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 145/309 (46%), Gaps = 16/309 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4092
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4093 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4150
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC---- 219
++ +G+++TF G+ RLG N P + LE + Q + L +AC
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTLFFLQVACGLNH 4209
Query: 220 ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
G V++ G G GKLG G+ T + P+ ++ + ++ V A G + +
Sbjct: 4210 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALT 4267
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG V T+G R L G + P+ + L V VA G T ++ GDVY++
Sbjct: 4268 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4327
Query: 336 GCGESASLG 344
G LG
Sbjct: 4328 GSNSEGQLG 4336
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 361 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 416
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 469
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 470 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 527
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 528 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 585
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 586 GGDNGKLGH 594
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 33/253 (13%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4131 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4190
Query: 98 ----------IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L
Sbjct: 4191 GQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVL 4248
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTL 199
I + + A G F+ L+++G VYTF G D +G +H P + P+L
Sbjct: 4249 CGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA-- 4301
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + +A G + LALA S VY+ G G+LG G + P L+ Q N+
Sbjct: 4302 -GVVIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNV 4357
Query: 260 QPVVVAAGAWHAA 272
+ ++AG H+A
Sbjct: 4358 RQ--ISAGRCHSA 4368
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 19/278 (6%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4094 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4153
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK----------NIFVVQAAIGNFFTA 162
G+++ FG +G G K + P+ V +L+ +F +Q A G T
Sbjct: 4154 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQARNNTLFFLQVACGLNHTL 4211
Query: 163 VLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+S +G V+ F G+ +LG P + L I + ++A G + +AL
Sbjct: 4212 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT--- 4267
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
VY+ G L G + P+ I + ++ V V GA H + G V
Sbjct: 4268 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVY 4325
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG G LG G+ P +V L ++ G
Sbjct: 4326 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4363
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736
Query: 223 GMAV 226
V
Sbjct: 737 DRQV 740
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4043 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4102
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4103 GEVFSWGDGDYGKLGH 4118
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 109 bits (273), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 25/272 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS AV + G + ++G GQLGHG T+ + P+ I+SL I Q G T+ ++
Sbjct: 700 HSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKN 759
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY +G +G + G+ T P V +L+ V+Q A G+ AVL+ V F
Sbjct: 760 GKVYTWGSSEYG--QLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVF 817
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPSGMAVYSVG-- 230
GN A +G ++ +IP + + Y ++ L C S A+ G
Sbjct: 818 --GNGAAMG-------------AASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDV 862
Query: 231 --CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G +LGHG+ E P+L+E + +++ ++ G H A + GR+ T G +
Sbjct: 863 YTWGTGQELGHGNNQTESTPKLVEALRNQSIRQ--ISCGGRHTAFLTDSGRIFTSGKDSF 920
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
G LGH + ++ PK +++L I V+ G+
Sbjct: 921 GQLGHQAGD-QNKPKKIESLTKTTFISVSCGE 951
Score = 97.8 bits (242), Expect = 8e-18, Method: Composition-based stats.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 21/303 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQ-----LGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+G +S A+T G VY +G S LG E++ P + SL I ++ + G
Sbjct: 641 SGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV--SIGF 698
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ + G++ +G G+ +G T+ P++++SL + ++ Q G T L
Sbjct: 699 YHSAAVRANGELLTWGVGEEGQLGHG--DTQNQVEPKVIQSLTSFWITQVQCGEKHTICL 756
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++ G+VYT+ +LG +P P+ LE V+QIA+G + A+ +
Sbjct: 757 TKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTA-LEKYNVLQIASGSTHC-AVLTNSKEV 814
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+ G +G + + P L+ + L++ + G + A + + G V TWG
Sbjct: 815 LVFGNGAAMG------AASIISIPTLVPSLKYLHIDKL--CCGHYSTAAISECGDVYTWG 866
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+ LGHGN + ES PK+V+AL + ++ G T +++ G +++ G LG
Sbjct: 867 TGQE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLG 924
Query: 345 HNA 347
H A
Sbjct: 925 HQA 927
Score = 94.7 bits (234), Expect = 6e-17, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H+I +T G VY++GS+ GQLG G T +P P+ +L+ ++Q A+G+
Sbjct: 744 TQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGST 803
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+++++ +V FG + + +++ P LV SLK + + + G++ TA +S
Sbjct: 804 HCAVLTNSKEVLVFGNGA------AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAIS 857
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G VYT WG LGH + P L+ L N + QI+ G + L SG
Sbjct: 858 ECGDVYT--WGTGQELGHGNNQTESTPK-LVEALRNQSIRQISCGGRHTAFLT--DSGR- 911
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+++ G G+LGH + D+ P+ IE
Sbjct: 912 IFTSGKDSFGQLGHQA-GDQNKPKKIESL 939
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG--------------TLENI 202
G++++A L+ G VY WG G P P P+LG +L +I
Sbjct: 642 GSYYSAALTENGDVYM--WGR----GSVKNP----PVPVLGIPQIEDQLLPIKLESLTDI 691
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
VV I + + A + +G + + G G G+LGHG ++ P++I+ L +
Sbjct: 692 VVVSIG----FYHSAAVRANG-ELLTWGVGEEGQLGHGDTQNQVEPKVIQS--LTSFWIT 744
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V G H + ++G+V TWG YG LG G+ P V AL + +A+G
Sbjct: 745 QVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTH 804
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAI 348
V++ +V FG G A++G +I
Sbjct: 805 CAVLTNSKEVLVFGNG--AAMGAASI 828
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4095
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4096 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4153
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST--DG 4210
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4268
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328
Query: 344 G 344
G
Sbjct: 4329 G 4329
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+V+ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 131/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4134 EALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4193
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4194 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4251
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4252 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4303
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LA+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4304 GAEHTLAIT---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4358
Query: 270 HAA 272
H+A
Sbjct: 4359 HSA 4361
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4097 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4156
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4157 DGKMFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSTDGSMVW 4214
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4215 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4270
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + + ++ V V GA H + G V WG G L
Sbjct: 4271 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV--GAEHTLAITSTGDVYAWGSNSEGQL 4328
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P ++ L ++ G
Sbjct: 4329 GLGHTNHVREPTLITVLQGKNIRQISAG 4356
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+LVE L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ + Q G T V+ G V G+ RLG +D+
Sbjct: 4014 QLAEAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4072
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4073 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4127
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4128 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERV 4185
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4186 TALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4225
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4046 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4105
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4106 GEVFSWGDGDYGKLGH 4121
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A++ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4094
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 4095 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4152
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4209
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4267
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327
Query: 344 G 344
G
Sbjct: 4328 G 4328
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4133 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4192
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4193 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4250
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4251 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4302
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4303 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4357
Query: 270 HAA 272
H+A
Sbjct: 4358 HSA 4360
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ + AA G T V+ G V G+ RLG +D+
Sbjct: 4013 QLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4071
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4072 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4126
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + + ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4127 RRPRQIEALQ--GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4184
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4185 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4224
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4045 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4104
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4105 GEVFSWGDGDYGKLGH 4120
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G+ L + G+V+ +G++ G +G + P+LVES
Sbjct: 266 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 323
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V A G F T V++ G +Y WG N LGH T + P + G LE
Sbjct: 324 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 381
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + A S +++ G G G LGHG R +P+ +E L +
Sbjct: 382 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 436
Query: 262 VVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A + ++ TWG G LGHG++E + VP VQAL D
Sbjct: 437 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 496
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G T ++ G V++ G + LG N ADG+
Sbjct: 497 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK 536
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 328 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 387
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 388 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 445
Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 504
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ +ALA + V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 505 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 559
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 560 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 28/256 (10%)
Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
I G VY +G+ S G + Y T + P+ +ES + V Q A G+ +
Sbjct: 231 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 289
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+R+G V+T WG + RLGH T+ + P L+ +L V IA G + +
Sbjct: 290 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 344
Query: 222 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
SG +Y G G G LGHG+ P+ + L LQ + VA G+WH+A+ G+
Sbjct: 345 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 402
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 329
+ T+G G +G LGHG+ E + PK V+AL+ +A+ VA G + + + E
Sbjct: 403 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 462
Query: 330 GDVYSFGCGESASLGH 345
++++G G+ LGH
Sbjct: 463 RKLFTWGDGDKNRLGH 478
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 25/326 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT + RP+ + SL + A G
Sbjct: 279 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 338
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNF 159
T +++ +G +Y +G S+ G GT K V+ P L+ + V+ A G++
Sbjct: 339 TCVVTASGDLYDWGDGSYNAGLLG-HGTGVSHWLPKRVSGP-----LEGLQVLSVACGSW 392
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A+ G+++TF G LGH + P + L +++A G + A+
Sbjct: 393 HSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKE-VEALSGFRAMKVACGVWHSAAIV- 450
Query: 220 QPSGMA--------VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ SG A +++ G G +LGHG + + P ++ N VA G
Sbjct: 451 EISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQ--VACGHSMT 508
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ G V T G G LG+ + + V L + ++ G ++ +
Sbjct: 509 VALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSE 568
Query: 332 VYSFGCGESASLGHNAIADGQVCSLL 357
VY++G G + LGH ++ D + +L+
Sbjct: 569 VYTWGMGANGRLGHGSVEDKKKPTLV 594
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4079
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4080 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4137
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4194
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4252
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312
Query: 344 G 344
G
Sbjct: 4313 G 4313
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4118 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4177
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4178 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4235
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4236 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4287
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4288 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4342
Query: 270 HAA 272
H+A
Sbjct: 4343 HSA 4345
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4081 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4140
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4141 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4198
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4199 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4254
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4255 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4312
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4313 GLGHTNHVREPTLVTVLQGKNVRQISAG 4340
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3998 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4056
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4057 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4111
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4112 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4169
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4170 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4209
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4030 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4089
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4090 GEVFSWGDGDYGKLGH 4105
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNIRQISAG 4351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 630
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 455 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 504
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 505 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 562
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 563 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 620
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 678
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 679 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 728
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 439 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 484
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 544
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 545 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 601
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH 682
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 610 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 715
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 725
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 726 ------SNDQCQ 731
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4197
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4255
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315
Query: 344 G 344
G
Sbjct: 4316 G 4316
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4181 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4238
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4290
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4291 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4345
Query: 270 HAA 272
H+A
Sbjct: 4346 HSA 4348
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4084 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4201
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4202 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4257
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4315
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4316 GLGHTNHVREPTLVTGLQGKNVRQISAG 4343
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4001 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4059
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4060 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4114
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4115 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4172
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4173 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4212
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4033 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4092
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4093 GEVFSWGDGDYGKLGH 4108
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4053
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4054 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4111
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4168
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4226
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286
Query: 344 G 344
G
Sbjct: 4287 G 4287
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4092 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4151
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4152 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4209
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4210 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4261
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4262 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4316
Query: 270 HAA 272
H+A
Sbjct: 4317 HSA 4319
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4055 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4114
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4115 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4172
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4173 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4228
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4229 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4286
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4287 GLGHTNHVREPTLVTGLQGKNVRQISAG 4314
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3972 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4030
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4031 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4085
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4086 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4143
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4144 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4183
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4004 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4063
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4064 GEVFSWGDGDYGKLGH 4079
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4190
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4248
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308
Query: 344 G 344
G
Sbjct: 4309 G 4309
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4231
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4283
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4284 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4338
Query: 270 HAA 272
H+A
Sbjct: 4339 HSA 4341
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4077 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4194
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4250
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4308
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4309 GLGHTNHVREPTLVTGLQGKNVRQISAG 4336
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3994 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4052
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4053 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4107
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4108 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4165
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4166 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4205
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4026 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4085
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4086 GEVFSWGDGDYGKLGH 4101
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 15/301 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G S + + VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQGEEVVQMSCGFKHSAV 4142
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4199
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4257
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317
Query: 344 G 344
G
Sbjct: 4318 G 4318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I Q A G
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNH 4191
Query: 107 TMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A G F+ L+
Sbjct: 4192 TLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVACGTQFSVALT 4249
Query: 166 REGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
++G VYTF G D +G +H P + P+L + + +A G + LALA
Sbjct: 4250 KDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAVGAEHTLALA 4301
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
S VY+ G G+LG G + P L+ Q N++ ++AG H+A
Sbjct: 4302 ---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRCHSA 4350
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ P E+ V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPXQGEEV-------VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4174
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4175 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4214
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVD--G 4198
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4256
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 344 G 344
G
Sbjct: 4317 G 4317
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4182 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4291
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346
Query: 270 HAA 272
H+A
Sbjct: 4347 HSA 4349
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4085 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSVDGSMVW 4202
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4203 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4258
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4317 GLGHTNHVREPTLVTGLQGKNVRQISAG 4344
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4002 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4060
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4061 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4115
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4116 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4173
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4174 TALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4213
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4034 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4093
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4094 GEVFSWGDGDYGKLGH 4109
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4204
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4262
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 344 G 344
G
Sbjct: 4323 G 4323
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352
Query: 270 HAA 272
H+A
Sbjct: 4353 HSA 4355
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4091 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4208
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4264
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ + + ++ V V GA H + +G V WG G L
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVRQISAG 4350
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4179
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4180 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4057
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4058 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4115
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4172
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4230
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290
Query: 344 G 344
G
Sbjct: 4291 G 4291
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4096 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4155
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4156 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4213
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4214 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4265
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4266 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4320
Query: 270 HAA 272
H+A
Sbjct: 4321 HSA 4323
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4059 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4118
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4119 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4176
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4177 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4232
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4233 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4290
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4291 GLGHTNHVREPTLVTVLQGKNIRQISAG 4318
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3976 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4034
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4035 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4089
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4090 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4147
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4148 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4187
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4008 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4067
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4068 GEVFSWGDGDYGKLGH 4083
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4198
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4256
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 344 G 344
G
Sbjct: 4317 G 4317
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4182 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4291
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346
Query: 270 HAA 272
H+A
Sbjct: 4347 HSA 4349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4085 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4144
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4145 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4202
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4203 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4258
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4317 GLGHTNHVREPTLVTGLQGKNVRQISAG 4344
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4002 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4060
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4061 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4115
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4116 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4173
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4174 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4213
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4034 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4093
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4094 GEVFSWGDGDYGKLGH 4109
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 50/302 (16%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS ++ G ++SFG + G+LGHG + PRPI +L G I+ AAG +
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G +Y +G + +G+ G+ K T P + L+ +V+ G T VL G
Sbjct: 258 VDSQGALYTWGWNRYGQ--LGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGH 315
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY+F + +LG + + ++P+ + L +N ++ IAAGY ++L L + VYS
Sbjct: 316 VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKG---CVYS 372
Query: 229 VG------CGLGGKLGHGSR----------------------------TDEKH------- 247
G GLG +GH SR +D ++
Sbjct: 373 FGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNA 432
Query: 248 ---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
P+++E + V +AAG WH+A++ GR+ T+G G LG+ +E + +P +
Sbjct: 433 KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMPCI 492
Query: 305 VQ 306
V
Sbjct: 493 VN 494
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 154/357 (43%), Gaps = 63/357 (17%)
Query: 46 SQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
S G H++AV + V S+G N GQLG G P PI L + AAG+
Sbjct: 141 SMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGS 200
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++S G++++FG +FG +G + +P+ + +L +V A G +A +
Sbjct: 201 QHSFVLSKFGELFSFGCGTFGRLGHGNELPSF--NPRPISTLVGKHIVSVAAGLMHSAAV 258
Query: 165 SREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+G +YT+ W +LG HT PN + LE +V++ G + L L
Sbjct: 259 DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNK------ELERFNIVKVVCGKNHTLVLDV 312
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
VYS G + G+LG GS TD P I+ N + + +AAG +H ++ + G
Sbjct: 313 NGH---VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGC 369
Query: 280 VCTWGWGRYGCLGHG--------------------------------------------N 295
V ++G+ G LG G N
Sbjct: 370 VYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINN 429
Query: 296 EECESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ PKVV+ N++ A+ +A G + + +++ G +Y+FG G++ LG+N D
Sbjct: 430 NNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQED 486
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
AVL + V SWG + +LG + N P P+ G ++IPV +AAG + L+
Sbjct: 152 AVLPNDATV--LSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VAAGSQHSFVLS- 207
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
++S GCG G+LGHG+ +PR I L+ V VAAG H+A V G
Sbjct: 208 --KFGELFSFGCGTFGRLGHGNELPSFNPRPIST--LVGKHIVSVAAGLMHSAAVDSQGA 263
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ TWGW RYG LG G + ++P + L + V G T V+ +G VYSFG
Sbjct: 264 LYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNV 323
Query: 340 SASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRHL 377
LG + D + + L + Q +I + Y H+
Sbjct: 324 CGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHV 361
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 13/261 (4%)
Query: 88 PIRSLQGIRIIQAAAGAGRTM-LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
P QG+ + A G + ++ + V ++G + +G+ G Q + +P + L
Sbjct: 131 PTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTP--ISGL 188
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
V A G+ + VLS+ G +++F G RLGH E P P+ TL +V
Sbjct: 189 SQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPI-STLVGKHIVS 247
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+AAG + A+ Q A+Y+ G G+LG G+ P ++ + N+ V V
Sbjct: 248 VAAGLMHSAAVDSQG---ALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNI--VKVVC 302
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ---ALNDVKAIHVATGDYTT 323
G H V+ +G V ++G+ G LG G+ P + ND + I +A G Y
Sbjct: 303 GKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND-EIIDIAAGYYHV 361
Query: 324 FVVSEDGDVYSFGCGESASLG 344
++++ G VYSFG +LG
Sbjct: 362 LLLTKKGCVYSFGYISDGALG 382
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 401 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 449
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 450 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 505
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 506 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 565
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 566 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 601
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 426 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 475
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 476 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 533
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 534 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 591
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 592 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 649
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 650 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 699
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 410 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 455
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 456 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 515
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 516 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 572
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 573 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH 653
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 521 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 580
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 581 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 638
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 639 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLALT 687
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 528 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 585
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 586 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 641
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 642 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 696
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 697 ------SNDQCQ 702
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 633
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 634 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 692 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTVLQGKNVRQISAG 4351
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 29/304 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
G H+ +T+ +VYS GSN++GQLG G + + P + +L + I A GA T+
Sbjct: 124 GDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTL 183
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAV 163
+ ++ G VY++G+ FG G + + P+L+ + ++Q + G F+A+
Sbjct: 184 VCTERGDVYSWGQGIFGALGAGNLDDQFL--PKLIHISHDQLSTKSQMIQVSAGMRFSAI 241
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQP 221
L + GRVYT + +LG D E P+ +++ P V IA G +LL L Q
Sbjct: 242 LDQSGRVYTCGQNDAGQLG--IGGRDQENIPI--SIKKFPERVSMIACGQMHLLMLTKQG 297
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ VYS G G+LG ++ + P LI+ + ++ VAAG++ A++ G +
Sbjct: 298 T---VYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMR--YVAAGSFSASISYDSGDLY 352
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG G +G P V+ + + + V+ G++ V++DG VYS+G S
Sbjct: 353 LWGSGVFGEF--------LTPHRVKTIKGM-TVSVSIGNHFGIAVNQDGIVYSWGHNNSG 403
Query: 342 SLGH 345
LG
Sbjct: 404 ELGQ 407
Score = 97.1 bits (240), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 15/282 (5%)
Query: 64 VYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++S+GS+ +GQLG G ++ + P P I I + G I+ VY+ G +
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSN 143
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+ G+ G K+ SP LVE+L + + A G T V + G VY++ G LG
Sbjct: 144 TNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALG 203
Query: 183 HHTEPNDVEP------HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+ P H L T + +Q++AG + L SG VY+ G G+
Sbjct: 204 AGNLDDQFLPKLIHISHDQLSTKSQM--IQVSAGMRFSAIL--DQSGR-VYTCGQNDAGQ 258
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LG G R E P I++F + ++A G H ++ + G V + G +G LG N+
Sbjct: 259 LGIGGRDQENIPISIKKFPE---RVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNK 315
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
S P ++Q ++ + +VA G ++ + + GD+Y +G G
Sbjct: 316 RNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSG 357
Score = 68.6 bits (166), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G H + +T +G VYS G+NS GQLG P I+ + I + AAG+
Sbjct: 281 SMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSF 340
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ D+G +Y +G FGE +P V+++K + V +IGN F ++
Sbjct: 341 SASISYDSGDLYLWGSGVFGE----------FLTPHRVKTIKGM-TVSVSIGNHFGIAVN 389
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 218
++G VY++ N LG D P P ++ L + V ++ G + +AL
Sbjct: 390 QDGIVYSWGHNNSGELGQGD--FDERPTPQIINQLNDKIVTLVSCGRNFSIALG 441
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++S G G+LG G S+ + +P + ++ N+ V+ G HAA + V + G
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYP--VPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMG 141
Query: 285 WGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G LG G+ + ++ P +V+AL D K I +A G T V +E GDVYS+G G +
Sbjct: 142 SNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGA 201
Query: 343 LGHNAIADGQVCSLLFLS 360
LG + D + L+ +S
Sbjct: 202 LGAGNLDDQFLPKLIHIS 219
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNIRQISAG 4351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 630
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 22/290 (7%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
+ ++ G VY+ NS + P+ ++ L I++ AA + + ++
Sbjct: 455 LILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT 504
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGR 169
G+VY++G G +G T + P+++ + VV A G+ ++A ++ EG
Sbjct: 505 GEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGE 562
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ GN RLGH + ++ P L+ L+ + V+ +A G LA +G V+S
Sbjct: 563 LYTWGRGNYGRLGHGSSEDEAIPM-LVAGLKGLKVIDVACGSGDAQTLAVTENGQ-VWSW 620
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G GKLG G K P+LIE+ Q L++ V V G+ + + +DG+V +WG G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDV--VKVRCGSQFSIALTKDGQVYSWGKGDNQ 678
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 679 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 728
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 439 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 484
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 544
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 545 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 601
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH 682
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 610 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLALT 716
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 725
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 726 ------SNDQCQ 731
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4204
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4262
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 344 G 344
G
Sbjct: 4323 G 4323
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4297
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352
Query: 270 HAA 272
H+A
Sbjct: 4353 HSA 4355
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4091 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSVVW 4208
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4264
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4323 GLGHTNHVREPTLVTGLQGKNVRQISAG 4350
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4179
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4180 TALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4219
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 270 HAA 272
H+A
Sbjct: 4352 HSA 4354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAG 4349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 4007 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4065
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4066 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4120
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4121 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4178
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4179 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4039 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4099 GEVFSWGDGDYGKLGH 4114
>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 27/288 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---------GIRIIQA- 100
G H+ VT + V+++G SG+LGHG ++PR + SL G+++++
Sbjct: 269 GVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLL 328
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T L + +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 329 SCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 386
Query: 161 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 387 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 445
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L SG +++ G + G+LG+ + D ++PRL+E+ +L V V GA+H
Sbjct: 446 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 500
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
AV+ Q G V TWG G G LGHG+ P V+AL D +A G
Sbjct: 501 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 548
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 176 GNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G+D+ T D+ P PL E+ ++ ++ C + A V++ G
Sbjct: 235 GSDSNAYSATAATDILVPKPL----ESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECS 290
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQ--PV------VVAAGAWHAAVVGQDGRVCTWGWG 286
G+LGHG+ T PRL+E + N++ PV +++ G WH A+ G++ T+G G
Sbjct: 291 GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDG 350
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGC 337
+G LGHGN E S PK V++L ++ I V+ G + T V E G ++++G
Sbjct: 351 TFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGD 410
Query: 338 GESASLGH 345
G+ LGH
Sbjct: 411 GDKYRLGH 418
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 25/290 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + A G L++ +V+ +G++ G +G GT + P+LVES
Sbjct: 252 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 309
Query: 146 LK--NIFVVQAAI--------GNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDV 190
L N+ + + G + TA+ + G++YTF G LGH P +V
Sbjct: 310 LSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEV 369
Query: 191 EPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
E L T+ + V AA ++A + SG +++ G G +LGHG R+ + P
Sbjct: 370 ESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSG-KLFTWGDGDKYRLGHGDRSSKLKPT 428
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ N V H +G G + T G YG LG+ N + V +
Sbjct: 429 CVPSLIDYNFHKAVCG----HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEK 484
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L + V G Y V+++ G+VY++G G + LGH IAD + + +
Sbjct: 485 LGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFV 534
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 24/247 (9%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 186
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 298
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLGH 239
+ +P L+ +L V + G + L+C + S +Y+ G G G LGH
Sbjct: 299 TSIFQPR-LVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGH 357
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGC 290
G+R +P+ +E L L+ + V+ G WH A V + G++ TWG G
Sbjct: 358 GNRETISYPKEVE--SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYR 415
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LGHG+ + P V +L D G T ++ G +++ G LG N D
Sbjct: 416 LGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNND 474
Query: 351 GQVCSLL 357
G+ L+
Sbjct: 475 GRYPRLV 481
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 18/301 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
AG HS+AV + G V+++G N +GQLG G W P+ ++ L G+ + A+AG +M
Sbjct: 154 AGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGV--VAASAGWAHSM 211
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G ++ G+ G+ P+ V+ L+ + V A G ++ L +G
Sbjct: 212 VALSDGSVWAWGNNTSGQLGNGIS-VGYGALPEQVQGLRGVMAVAA--GGLYSLALRSDG 268
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++ +WG++ G + + V + VV +AAG + LA+ + +++
Sbjct: 269 TLW--AWGSNDH-GQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGT---LWA 322
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+R D P+ ++ + V VAAG H+ + DG V TWG+
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSRV----VAVAAGDGHSIALCADGTVWTWGYNHD 378
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G L HG+ VP V+ L+ V A VA G + V DG V+++G LG ++
Sbjct: 379 GQLAHGSTNDSPVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSL 436
Query: 349 A 349
+
Sbjct: 437 S 437
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 140/298 (46%), Gaps = 22/298 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHSIA+ + G V+++G N GQL HG+T + P +R L G ++ AAGA ++
Sbjct: 356 AGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG--VVAVAAGALHSLA 413
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G + P V+ L + V A + + L+R
Sbjct: 414 VLSDGSVWAWGYNRQGQLGDGSLSSS--AEPVRVQGLSGVAAVSAGLNHS----LARGTD 467
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
++WG ++ +LG T N + P + G V I+AG+ + LA A ++
Sbjct: 468 GGVWAWGGNSFGQLGEGTTSNALVPVRVRGL---SGVETISAGFNHSLARASDG---GLW 521
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+ ++ P ++ + V AG H+ V DG V WG
Sbjct: 522 AWGGNYTGQLGDGTTSNSSVPVRVQGLSGV----AAVFAGLNHSLAVRTDGSVWAWGINS 577
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG G P VQ L+ ++ VA G + V DG ++S+G LGH
Sbjct: 578 FGQLGEGTTNTSFAPVRVQGLSGMET--VAAGSLHSLSVGSDGSMWSWGNNHHGQLGH 633
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 23/309 (7%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
A AG HS+ S G V+++G+N+SGQLG+G + P ++ L+G+ + AAG
Sbjct: 203 ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAV--AAGGLY 260
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G ++A+G + G+ G T ++S V L VV A G+ + +
Sbjct: 261 SLALRSDGTLWAWGSNDHGQRGDGS--TVYLSSSVRVRWLSG--VVAMAAGSAHSLAVRS 316
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G ++ +WG + +LG T + P + G VV +AAG + +AL +
Sbjct: 317 DGTLW--AWGANYYGQLGDGTRKDHDTPKRVQGLSR---VVAVAAGDGHSIALCADGT-- 369
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+L HGS D P + + + V VAAGA H+ V DG V WG
Sbjct: 370 -VWTWGYNHDGQLAHGSTNDSPVPLHVRELSGV----VAVAAGALHSLAVLSDGSVWAWG 424
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ R G LG G+ + P VQ L+ V A V+ G + DG V+++G LG
Sbjct: 425 YNRQGQLGDGSLSSSAEPVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLG 482
Query: 345 HNAIADGQV 353
++ V
Sbjct: 483 EGTTSNALV 491
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 28/311 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+++G N+ GQLG G+++ P +R L G ++ +AG G ++
Sbjct: 3 AGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHSLA 60
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G ++ G+ G + + P V L + V A G+ + L +G
Sbjct: 61 LHRDGTVWAWGDNALGQLGDGTSDSH--SEPVRVPGLSGVVAVSA--GDNHSLALRSDGS 116
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
V+ + N +LG P + + + LE++ VV +AAG + LA+ + V++
Sbjct: 117 VWAWGDNNSDQLG--GAPG-AQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGT---VWA 170
Query: 229 VGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 286
G G+LG G+ T P+ Q+ L VV A+ W H+ V DG V WG
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPK-----QVQGLSGVVAASAGWAHSMVALSDGSVWAWGNN 225
Query: 287 RYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG+G + ++P+ VQ L V A VA G + + DG ++++G + H
Sbjct: 226 TSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSND-----H 278
Query: 346 NAIADGQVCSL 356
DG L
Sbjct: 279 GQRGDGSTVYL 289
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 141/315 (44%), Gaps = 37/315 (11%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V+++G N+S QLG G + P R ++ AAG ++
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLA 161
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G V+A+G + G+ G L T P+ V+ L VV A+ G + V +
Sbjct: 162 VRADGTVWAWGDNFAGQLG---DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSD 216
Query: 168 GRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
G V+ +WGN+ +G+ P V+ L G V+ +AAG Y LAL
Sbjct: 217 GSVW--AWGNNTSGQLGNGISVGYGALPEQVQG--LRG------VMAVAAGGLYSLALRS 266
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
+ A G HG R D L ++ L VV +AAG+ H+ V DG
Sbjct: 267 DGTLWAW--------GSNDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDG 318
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WG YG LG G + PK VQ L+ V A VA GD + + DG V+++G
Sbjct: 319 TLWAWGANYYGQLGDGTRKDHDTPKRVQGLSRVVA--VAAGDGHSIALCADGTVWTWGYN 376
Query: 339 ESASLGHNAIADGQV 353
L H + D V
Sbjct: 377 HDGQLAHGSTNDSPV 391
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 20/247 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V+++G N GQLG G+ P ++ L G+ + +AG ++
Sbjct: 406 AGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLSGVAAV--SAGLNHSLA 463
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
G V+A+G +SFG+ G LV P V L + + A F L+R
Sbjct: 464 RGTDGGVWAWGGNSFGQLGEGTTSNALV--PVRVRGLSGVETISAG----FNHSLARASD 517
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
++WG + +LG T N P + G V + AG + LA+ S V+
Sbjct: 518 GGLWAWGGNYTGQLGDGTTSNSSVPVRVQGL---SGVAAVFAGLNHSLAVRTDGS---VW 571
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+ P ++ + VAAG+ H+ VG DG + +WG
Sbjct: 572 AWGINSFGQLGEGTTNTSFAPVRVQGLSGME----TVAAGSLHSLSVGSDGSMWSWGNNH 627
Query: 288 YGCLGHG 294
+G LGHG
Sbjct: 628 HGQLGHG 634
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 24/250 (9%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AAG ++ + G V+A+G ++ G+ G + + P V L + V A G+
Sbjct: 2 AAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSH--SEPVRVRGLSGVVAVSAGEGHSL 59
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
L R+G V+ +WG++A +LG T + EP + G VV ++AG + LAL
Sbjct: 60 --ALHRDGTVW--AWGDNALGQLGDGTSDSHSEPVRVPGL---SGVVAVSAGDNHSLALR 112
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
S V++ G +LG G+ + + P +E + V VAAG H+ V
Sbjct: 113 SDGS---VWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLS----EVVAVAAGGNHSLAVRA 164
Query: 277 DGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG G LG GN +PK VQ L+ V A + G + V DG V+++
Sbjct: 165 DGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAW 222
Query: 336 GCGESASLGH 345
G S LG+
Sbjct: 223 GNNTSGQLGN 232
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+AAG H+ + DG V WG G LG G+ + S P V+ L+ V A V+ G+ +
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSGVVA--VSAGEGHS 58
Query: 324 FVVSEDGDVYSFGCGESASLG 344
+ DG V+++G LG
Sbjct: 59 LALHRDGTVWAWGDNALGQLG 79
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 270 HAA 272
H+A
Sbjct: 4352 HSA 4354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAG 4349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 4007 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4065
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4066 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4120
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4121 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4178
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4179 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4039 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4099 GEVFSWGDGDYGKLGH 4114
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTD--G 4204
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4262
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 344 G 344
G
Sbjct: 4323 G 4323
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+V+ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4297
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352
Query: 270 HAA 272
H+A
Sbjct: 4353 HSA 4355
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4091 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4150
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSTDGSMVW 4208
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4264
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4323 GLGHTNHVREPTLVTVLQGKNIRQISAG 4350
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+LVE L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4179
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4180 TALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4219
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y +G N+ G LG G+ +W PR + L+GI + + G T
Sbjct: 365 GEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHT 424
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + + V+ P+ VESLK + ++AA G + TA +
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEI 482
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + + P + TL Q+A G+
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPT-CVATLVEPNFCQVACGHSLTA 541
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + VY++G + G+LG+ + D P +E + N + A GA+H AV+
Sbjct: 542 ALT---TTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEEL-ACGAYHVAVLT 596
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ + + P VV+AL D + + G T +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 26/294 (8%)
Query: 76 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 135
G G + + P+ + S + + A G L++ G+V+++G++ G +GV
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD- 344
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 191
V+ P+ V+ LKN V A G + + ++ G +Y WG +A LG +E
Sbjct: 345 -VSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWV 401
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
P L G LE I V ++ G + + S +++ G G G LGHG R PR +
Sbjct: 402 PRKLDGPLEGIHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRISVSIPREV 458
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 299
E L L+ + A G WH A V + G++ TWG G LGHG++E
Sbjct: 459 E--SLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEAR 516
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VP V L + VA G T ++ G VY+ G LG N ADG +
Sbjct: 517 LVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADGML 569
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G
Sbjct: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVW 474
Query: 106 RTMLISD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + + +G+++ +G +G + +LV P V +L Q
Sbjct: 475 HTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLV--PTCVATLVEPNFCQ 532
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
A G+ TA L+ G+VYT +LG + + + + P + G L V ++A G +
Sbjct: 533 VACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADGMLPTRVEGKLMKNFVEELACGAYH 591
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 268
+ L S VY+ G G G+LGHG D P ++E + ++ +V AA
Sbjct: 592 VAVLT---SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAIC 648
Query: 269 WHAAVVGQDGRVCT 282
H V G D +C+
Sbjct: 649 LHKWVSGIDQSMCS 662
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 26/295 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AVT G +Y++G +++SG LGHG+ W P+ + ++G+ + A G T
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHT 411
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ AGQ++ FG +FG +G + ++ P+ VE+L+ ++ A G + TA +
Sbjct: 412 AVVTSAGQLFTFGDGTFGALGHGDHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVEL 469
Query: 165 ------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
S G+++T+ G+ RLGH + + P + L N Q+A G+
Sbjct: 470 MIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTA-LINESFCQVACGHN 528
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
L++A SG VY++G + G+LG D K P L+E ++ N VA G++H A
Sbjct: 529 --LSVALTTSGR-VYTMGSAVYGQLG-SPVADGKIPTLVEG-KIANSFVEEVACGSYHVA 583
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V+ V TWG G G LGHG+ + + P +V L D + +V G T +S
Sbjct: 584 VLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 31/311 (9%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ GS+SS ++ + P+ + S + + A G +L++ G+V+++G++
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARL 181
+GV+ V+ P+L+++L + + A G + + ++ G +YT+ G N L
Sbjct: 321 GSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLL 378
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH +E + P + G +E + V +A G + + S +++ G G G LGHG
Sbjct: 379 GHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVT---SAGQLFTFGDGTFGALGHGD 435
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------------DGRVCTWGWG 286
+ PR +E L + + VA G WH A V + G++ TWG G
Sbjct: 436 HSSMSIPREVEA--LRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG 493
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LGHG++E VP+ V AL + VA G + ++ G VY+ G LG +
Sbjct: 494 DKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG-S 552
Query: 347 AIADGQVCSLL 357
+ADG++ +L+
Sbjct: 553 PVADGKIPTLV 563
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 32/316 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT KG V+S+G +LGHG + P+ I +L G+ I A G + +
Sbjct: 300 GGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAV 359
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGR 169
+ +G +Y +G + G P+ V ++ + V A G + TAV++ G+
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQ 419
Query: 170 VYTFSWGNDARLGH--HTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
++TF G LGH H+ P +VE L +++A G + A+
Sbjct: 420 LFTFGDGTFGALGHGDHSSMSIPREVE------ALRGQRTMRVACGVWHTAAVVELMIAS 473
Query: 219 ------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWH 270
S +++ G G G+LGHG +K PRL+ Q L+N VA G
Sbjct: 474 SSFESSGSSSSGKLFTWGDGDKGRLGHG----DKEPRLVPQSVTALINESFCQVACGHNL 529
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSED 329
+ + GRV T G YG LG + + +P +V+ + + VA G Y V++
Sbjct: 530 SVALTTSGRVYTMGSAVYGQLGSPVADGK-IPTLVEGKIANSFVEEVACGSYHVAVLTSK 588
Query: 330 GDVYSFGCGESASLGH 345
+VY++G G + LGH
Sbjct: 589 TEVYTWGKGTNGQLGH 604
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 26/259 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG PR + +L+G R ++ A G T +
Sbjct: 407 GPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAV 466
Query: 111 SD---------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +G+++ +G G +G + +LV PQ V +L N Q A
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLV--PQSVTALINESFCQVA 524
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+ + L+ GRVYT +LG + P + G + N V ++A G ++
Sbjct: 525 CGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKI-PTLVEGKIANSFVEEVACGSYHVA 583
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
L S VY+ G G G+LGHG P L++ + ++ VV AA + H
Sbjct: 584 VLT---SKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLH 640
Query: 271 AAVVGQDGRVCTWGWGRYG 289
V D +C+ ++G
Sbjct: 641 KWVSCADHSICSGCHNQFG 659
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 270 HAA 272
H+A
Sbjct: 4352 HSA 4354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAG 4349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 4007 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4065
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4066 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4120
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4121 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4178
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4179 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4039 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4099 GEVFSWGDGDYGKLGH 4114
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSVDGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4220
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4208
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4266
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326
Query: 344 G 344
G
Sbjct: 4327 G 4327
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4192 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4249
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + PLL + + +A
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PLLA---GVIIEDVAV 4301
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4302 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4356
Query: 270 HAA 272
H+A
Sbjct: 4357 HSA 4359
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4095 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4154
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4155 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4212
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4213 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4268
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4269 DRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4326
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4327 GLGHTNHVREPTLVTGLQGKNVRQISAG 4354
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4012 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4070
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4071 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4125
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4126 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4183
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4184 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4223
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4044 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4103
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4104 GEVFSWGDGDYGKLGH 4119
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 630 TGQVYAWGCG 639
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 689 NNSMGQCGQGNSTG 702
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 21/301 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3628
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3629 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3686
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P ++A G + LA++ G
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSA--DG 3732
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 3733 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 3790
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 3791 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 3850
Query: 344 G 344
G
Sbjct: 3851 G 3851
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 361 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 416
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 469
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 470 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 527
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 528 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 585
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 586 GGDNGKLGH 594
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 60/267 (22%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 3630 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 3689
Query: 113 AGQVYAFGKD-------------------------------------SFGEAEYGVQG-- 133
G+++ FG +FG+ +YG G
Sbjct: 3690 DGKLFTFGNGDYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLG 3749
Query: 134 -TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHT 185
+ +SPQ V+ L I + + A G F+ L+++G VYTF G D +G +H
Sbjct: 3750 NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHN 3807
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
P V P+L + + +A G + LALA S VY+ G G+LG G
Sbjct: 3808 RPQQV---PVLA---GVVIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHV 3858
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ P L+ Q N++ ++AG H+A
Sbjct: 3859 REPTLVTVLQGKNVRQ--ISAGRCHSA 3883
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736
Query: 223 GMAV 226
V
Sbjct: 737 DRQV 740
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G VY+FG + L G RP+ + L G+ I A GA T+ +
Sbjct: 3774 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 3833
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ G VYA+G +S E + G+ T V P LV L+ V Q + G +A
Sbjct: 3834 ASTGDVYAWGSNS--EGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSA 3883
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 3579 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 3638
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 3639 GEVFSWGDGDYGKLGH 3654
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 270 HAA 272
H+A
Sbjct: 4352 HSA 4354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNIRQISAG 4349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 4007 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4065
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4066 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4120
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4121 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4178
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4179 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4039 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4099 GEVFSWGDGDYGKLGH 4114
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)
Query: 60 SKGVVYSFGSNSSGQLGHGTT--------EEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
++ VY++G+ + GQLGHG+ EE P+ +L+G I GA + I
Sbjct: 67 TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAID 126
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+ G++Y +G + + + G + +++ T P+ VE+LK I +V + G++FTA + +G++Y
Sbjct: 127 EEGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMY 185
Query: 172 TFSWGNDA---RLGHHTEPNDVEPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPSGMA 225
++ WG G EP P LL TL + +P+ + G + +AL
Sbjct: 186 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGE--- 242
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+++ G G G+LG+G + P IE F N+ V +AAG + + G + +WG
Sbjct: 243 IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDKGELYSWGG 300
Query: 286 GRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
LG G ES+P +V+A N + +A G V+EDG +Y +G
Sbjct: 301 NSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWGA 358
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 148/307 (48%), Gaps = 29/307 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS A+ +G +Y +GSN +LG G ++E E PR + +L+GI+I+ + G T
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAA 177
Query: 110 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVL 164
+ + G++Y++G G G G K +P+L+ +L + V A + G F T L
Sbjct: 178 VDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVAL 237
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+++G ++ + G RLG+ P P+ VV IAAG + AL +
Sbjct: 238 TKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSFALTDKGE-- 294
Query: 225 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+YS G G+GG L E P L+E F L ++ + AAG HAA V +DG
Sbjct: 295 -LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQI--AAGYDHAAAVTEDG 351
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
R+ WG + P + A+N+ K VA G T +++DG V++FG G
Sbjct: 352 RLYMWG-----------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKG 400
Query: 339 ESASLGH 345
S LGH
Sbjct: 401 SSNCLGH 407
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++A+T G ++++G+ G+LG+G ++ P PI ++ AAG + +
Sbjct: 230 GEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFAL 289
Query: 111 SDAGQVYAFGKDSFGEAEYGVQG------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+D G++Y++G +S + + G+ G + + P LVE+ + V Q A G A +
Sbjct: 290 TDKGELYSWGGNS--QNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAV 347
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +GR+Y WG A++ +EPH + E+ + Q+A G Y + L
Sbjct: 348 TEDGRLYM--WG--AKIW-------IEPHEMTAVNEH-KMTQVACGRQYTVGLTDDGK-- 393
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
V++ G G LGHG R ++ P I+ +N+ V+ G +H +
Sbjct: 394 -VFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITS--VSCGDYHMGAI 440
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 106 RTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
RT + VY +G + G+ + G++ +P+L E+L+ + G
Sbjct: 61 RTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGAS 120
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 218
+A + EG++Y + ++LG E +++E P + L+ I +V ++ G Y A
Sbjct: 121 HSAAIDEEGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGIKIVDVSCG-DYFTAAV 178
Query: 219 CQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+ M YS G G G LGH DE PRL+ + V G +H
Sbjct: 179 DEDGKM--YSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ +DG + WG G YG LG+G + VP+ ++ + + +A G +F +++ G++Y
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELY 296
Query: 334 SFGCGESASLG 344
S+G LG
Sbjct: 297 SWGGNSQNQLG 307
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRT--------DEKHPRLIEQFQLLNLQPVVVA 265
+L A + +VY+ G G G+LGHGS +E P+L E + + V
Sbjct: 59 VLRTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEF- 117
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 324
GA H+A + ++G++ WG Y LG G + E E++P+ V+AL +K + V+ GDY T
Sbjct: 118 -GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTA 176
Query: 325 VVSEDGDVYSFGCGES 340
V EDG +YS+G G S
Sbjct: 177 AVDEDGKMYSWGWGGS 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 43 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGI 95
++N +IA G S A+T KG +YS+G NS QLG G E P + + G+
Sbjct: 273 KDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGL 332
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ Q AAG +++ G++Y + G K+ P + ++ + Q A
Sbjct: 333 LVKQIAAGYDHAAAVTEDGRLYMW-------------GAKIWIEPHEMTAVNEHKMTQVA 379
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +T L+ +G+V+TF G+ LGH N ++P + L + + ++ G ++
Sbjct: 380 CGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQ-ALAGVNITSVSCGDYHMG 438
Query: 216 ALAC 219
A+A
Sbjct: 439 AIAT 442
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4019
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 4020 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4077
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4134
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4192
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V +A G T ++ GDVY++G L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252
Query: 344 G 344
G
Sbjct: 4253 G 4253
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 145/303 (47%), Gaps = 48/303 (15%)
Query: 75 LGHGTTEEEWRPRPIRSLQGI------------RIIQAAAGAGRTM------------LI 110
LG +WR P RS G+ + + A+ RT ++
Sbjct: 310 LGSSADRSQWR-EPTRSSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIV 368
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSV 424
Query: 171 YTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G+ RLG N EPH +++ + + + G+ LA G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TLAFTTEG 477
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +DG + TW
Sbjct: 478 -EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 342
G G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 343 LGH 345
LGH
Sbjct: 594 LGH 596
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4058 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4117
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4118 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4175
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + IA
Sbjct: 4176 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDIAV 4227
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4228 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQ--ISAGRC 4282
Query: 270 HAA 272
H+A
Sbjct: 4283 HSA 4285
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ + AA G T V+ G V G+ RLG +D+
Sbjct: 3938 QLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 3996
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 3997 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4051
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + + ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4052 RRPRQIEALQ--GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4109
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4110 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4149
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 3970 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4029
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4030 GEVFSWGDGDYGKLGH 4045
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 18/291 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG G+ P PI + Q + I A+G T+ ++ +VY+ G +
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
FG+ G Q ++ P LV + A G+FF+ ++ G + F WG
Sbjct: 59 EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ + + LL + + VVQ+A G + +AL + + + S G G+LG GS
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169
Query: 243 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 299
E P +I LN P+ + AGA+H+ V+ G + TWG +G LGHGN + +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
S P++V+ L + + VA G+ + + +G V+S+G G + LGHN++A+
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN 277
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++ +TS VYS GSN GQLG + + RP + I AAG ++
Sbjct: 38 SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+++G ++ +G+ GE + + P+L++ + + VVQ A G L+ EG
Sbjct: 96 IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ SWG++ + LG +E +EP ++ +L P+ QI AG + L+ PSG
Sbjct: 153 I--LSWGSNTQGQLGLGS-SEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205
Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+++ G G+LGHG S + + PRL++ L + + V VA G H+ ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVKT--LRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LGH + + PK + L + G T +++ + FG + LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Query: 345 -HN 346
HN
Sbjct: 324 THN 326
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q G H IA+T +G + S+GSN+ GQLG G++E E+ P I SL I Q AGA
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S +G ++ +GK+++G+ +G +SP+LV++L++ VV A+G + +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
R G V+++ G + +LGH++ N +P ++ L V QI G + ++L
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G +LG + T + P I + Q +AAG + Q+ C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
SQ AG HS ++ G ++++G N+ GQLGHG ++ + PR +++L+ ++ A G
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ + G V+++G G + G VT P+ + L V Q G T L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ + ++ F ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1670
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 1671 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1728
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 1785
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 1843
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903
Query: 344 G 344
G
Sbjct: 1904 G 1904
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 1709 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1768
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 1769 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 1826
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 1827 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 1878
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 1879 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 1933
Query: 270 HAA 272
H+A
Sbjct: 1934 HSA 1936
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 1672 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 1731
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 1732 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 1789
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 1790 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 1845
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 1846 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 1903
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 1904 GLGHTNHVREPTLVTGLQGKNVRQISAG 1931
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 1589 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 1647
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 1648 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 1702
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 1703 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 1760
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 1761 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1800
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 1621 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 1680
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 1681 GEVFSWGDGDYGKLGH 1696
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3563
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3564 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3621
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSM--DG 3678
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 3736
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L+ V +A G T +S GDVY++G L
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796
Query: 344 G 344
G
Sbjct: 3797 G 3797
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 3602 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3661
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 3662 GQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 3719
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V L + + IA
Sbjct: 3720 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 3771
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LAL+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 3772 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 3826
Query: 270 HAA 272
H+A
Sbjct: 3827 HSA 3829
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3482 QLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 3540
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 3541 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 3595
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 3596 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 3653
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 3654 TALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLG 3693
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 3514 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 3573
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 3574 GEVFSWGDGDYGKLGH 3589
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4214
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4272
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 344 G 344
G
Sbjct: 4333 G 4333
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4362
Query: 270 HAA 272
H+A
Sbjct: 4363 HSA 4365
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4101 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4160
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4161 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4218
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4219 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4274
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4275 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4333 GLGHTNHVREPTLVTVLQGKNIRQISAG 4360
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 4018 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4076
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4077 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4131
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4132 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4189
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4190 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4050 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4109
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4110 GEVFSWGDGDYGKLGH 4125
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3731
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3732 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3789
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 3846
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 3904
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964
Query: 344 G 344
G
Sbjct: 3965 G 3965
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 3770 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3829
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 3830 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 3887
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 3888 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 3939
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P ++ Q N++ ++AG
Sbjct: 3940 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQ--ISAGRC 3994
Query: 270 HAA 272
H+A
Sbjct: 3995 HSA 3997
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 3733 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 3792
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 3793 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 3850
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 3851 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 3906
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 3907 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 3964
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P VV L ++ G
Sbjct: 3965 GLGHTNHVREPTVVTGLQGKNVRQISAG 3992
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALP 737
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3650 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 3708
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 3709 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 3763
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 3764 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 3821
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 3822 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3861
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 3682 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 3741
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 3742 GEVFSWGDGDYGKLGH 3757
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + +A +G VY G G+LG GS
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TMEKDRIIEIAA 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VYA+G +S+G+ G + + +P +E + I + A +A ++ G VY W
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTMEKDR-IIEIAACHSTHTSAAKTQGGHVYM--W 334
Query: 176 G 176
G
Sbjct: 335 G 335
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 270 HAA 272
H+A
Sbjct: 4354 HSA 4356
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4092 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4265
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4324 GLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4009 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4067
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4068 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4122
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4123 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4181 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4041 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4101 GEVFSWGDGDYGKLGH 4116
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
+ +L+ VV + G + VL+ EGRV++F G RLGH E EP +
Sbjct: 31 IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTA 90
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----------- 251
V +I+AG + LAL G A YS G G+ G+LGHG TD+ PR I
Sbjct: 91 GVAKISAGTTHSLALT--KDGKA-YSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPV 147
Query: 252 -EQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
++ + PV+ VAAG +H+ ++ DGRV ++G G G LGHG+ + P +++AL
Sbjct: 148 GDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEAL 207
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFG 336
D + + +A G T V+ ++G V+ FG
Sbjct: 208 ADRRIVSMACGSANTLVLDDEGRVFFFG 235
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 28/303 (9%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 119
+GVV S G G LG G + PIR+L+ R++ +AG ++++++ G+V++F
Sbjct: 2 RGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSF 61
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGND 178
G G +G + T P+ + V + + G + L+++G+ Y+F +G
Sbjct: 62 GNGLHGRLGHGNEETCF--EPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF 119
Query: 179 ARLGHHTEPNDVEPH----------PLLGTL----ENIPVVQ-IAAGYCYLLALACQPSG 223
RLGH E + + P P +G E PV++ +AAGY + L L
Sbjct: 120 GRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR- 178
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VYS G G+ G LGHG R P +IE L + + V +A G+ + V+ +GRV +
Sbjct: 179 --VYSFGAGVMGALGHGDRDKRLRPTMIE--ALADRRIVSMACGSANTLVLDDEGRVFFF 234
Query: 284 G--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
G + + G +P + ++ + G +++ +G + +FG G++
Sbjct: 235 GLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGH--CLLLTREGKLLAFGLGKNG 292
Query: 342 SLG 344
LG
Sbjct: 293 RLG 295
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 21/238 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ +T+ G VYSFG+ G LGHG ++ RP I +L RI+ A G+ T++
Sbjct: 165 AGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLV 224
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ D G+V+ FG D ++ + V P + + I V+A G+ +L+REG+
Sbjct: 225 LDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL--LLTREGK 282
Query: 170 VYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQIAAGYCYLLALACQP-SGM 224
+ F G + RLG E N + P P GT + IA G + LAL P G
Sbjct: 283 LLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTS--VEIDIACGAKHGLALVDVPGEGP 340
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPR--------LIEQFQLLNLQPVVVAAGAWHAAVV 274
+Y+ G G G+L +G R D P L+ Q ++ P ++AG H+ V+
Sbjct: 341 RLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQ----HIVPAAISAGKAHSLVL 394
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 32/318 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
AG HS+ +T +G V+SFG+ G+LGHG E + PR I + + +AG ++
Sbjct: 44 AGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSL 103
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLV----------TSP----QLVESLKNIFVVQA 154
++ G+ Y+FG FG +G + +L+ SP ++ E+ + +
Sbjct: 104 ALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHV 163
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G F + +L+ +GRVY+F G LGH + P ++ L + +V +A G
Sbjct: 164 AAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRP-TMIEALADRRIVSMACGSANT 222
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAA 272
L L G + G + E R + L L + V AG H
Sbjct: 223 LVL--DDEGRVFF-----FGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL 275
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVAT------GDYTTFV 325
++ ++G++ +G G+ G LG G+E P V N ++ + G V
Sbjct: 276 LLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDV 335
Query: 326 VSEDGDVYSFGCGESASL 343
E +Y+FG G+ L
Sbjct: 336 PGEGPRLYAFGSGDQGQL 353
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
V S G G G LG G + ++ + L VV V+AG H+ V+ ++GRV ++G
Sbjct: 5 VLSAGGGQHGSLGQGDAVTQL--SVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASL 343
G +G LGHGNEE P+ + + + ++ G + +++DG YSFG G L
Sbjct: 63 NGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRL 122
Query: 344 GHNAIAD 350
GH D
Sbjct: 123 GHGDETD 129
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V + G G++G LG G+ + SV ++AL + + V+ G + + V++E+G V+SFG
Sbjct: 3 GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62
Query: 337 CGESASLGH 345
G LGH
Sbjct: 63 NGLHGRLGH 71
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 22/304 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q + P S ++ K Y++GSNSS QL G ++ P+ + + IQ AG
Sbjct: 324 QHLGSPNDSSSL--KHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNA--IQLEAGQYC 379
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIG-NFFT 161
T + D G ++A GK S G+ G +K Q + L +NI + ++ G + T
Sbjct: 380 TFALFDDGSLHACGKGSHGKLGLGDSSSK-----QCLHKLNLFNQNIDQISSSKGSDSHT 434
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L++ G VY++ G +LGH P + G +N + I+AG + A+
Sbjct: 435 LALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDG 494
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-RV 280
+Y+ G G G+LGHG + ++ P L+ + VAAG H V+ +D V
Sbjct: 495 D---LYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQ----VAAGCSHTVVLSKDEMTV 547
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
T+G G G LGHGN + E PK+V AL ++ +A G + ++ G +Y +GCG
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC 607
Query: 341 ASLG 344
+G
Sbjct: 608 LGVG 611
Score = 107 bits (267), Expect = 9e-21, Method: Composition-based stats.
Identities = 86/309 (27%), Positives = 156/309 (50%), Gaps = 25/309 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGA- 104
Q AG + A+ G +++ G S G+LG G + + + Q I I ++ G+
Sbjct: 372 QLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSD 431
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAV 163
T+ ++ G VY++G FG+ +G T+ + P+++ + KN + + G+ +A
Sbjct: 432 SHTLALTKNGVVYSWGDGEFGKLGHGNVATQKL--PKVIRGVFKNQIITFISAGSRHSAA 489
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++++G +YT+ G RLGH P L+ +++ Q+AAG + + L+
Sbjct: 490 ITKDGDLYTWGEGEHGRLGHGDSSIQRVP-TLVRSID--AASQVAAGCSHTVVLS--KDE 544
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M V++ G G GKLGHG+ E +P++++ + + ++ + AAG + + G + W
Sbjct: 545 MTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKI--AAGTQCSIALTWTGFIYVW 602
Query: 284 GWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG------ 336
G G CLG G + +PK+V++L DV + ++ GD +S D +VYS+G
Sbjct: 603 GCGP--CLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQ 660
Query: 337 CGESASLGH 345
CG LGH
Sbjct: 661 CG----LGH 665
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 22/286 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 104
S + H++A+T GVVYS+G G+LGHG + P+ IR + +II +AG+
Sbjct: 425 SSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGS 484
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ I+ G +Y +G+ G +G + V P LV S+ Q A G T VL
Sbjct: 485 RHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRV--PTLVRSIDA--ASQVAAGCSHTVVL 540
Query: 165 SR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
S+ E V+TF G++ +LGH + P ++ L+ I + +IAAG +AL +G
Sbjct: 541 SKDEMTVWTFGAGDNGKLGHGNTKMEYYPK-IVDALKGIRIKKIAAGTQCSIALTW--TG 597
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+Y GC G LG G+ D H P+++E L ++ V ++ G H + D V
Sbjct: 598 F-IYVWGC--GPCLGVGA-ADAVHLLPKIVE--SLRDVHIVDISLGDCHCLALSADHEVY 651
Query: 282 TWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTF 324
+WG G G G+ C S+P V AL+ +K ++TG +F
Sbjct: 652 SWGNNNMGQCGLGH--CFTPVSLPTKVLALDGIKIEQISTGTSHSF 695
Score = 39.7 bits (91), Expect = 2.5, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G +L G++ P+ + F+ + + AG + + DG + G G
Sbjct: 340 YAWGSNSSHQLVEGNKDKILTPKKNDAFK----NAIQLEAGQYCTFALFDDGSLHACGKG 395
Query: 287 RYGCLGHGNEECESVPKVVQALN-DVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+G LG G+ + + N ++ I + G D T ++++G VYS+G GE LG
Sbjct: 396 SHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLG 455
Query: 345 HNAIA 349
H +A
Sbjct: 456 HGNVA 460
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4204
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4262
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322
Query: 344 G 344
G
Sbjct: 4323 G 4323
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352
Query: 270 HAA 272
H+A
Sbjct: 4353 HSA 4355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4179
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4180 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G +Y +G N GQLG + P+ I +L IR +Q G ++ G+VYA
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA--T 3411
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 179
G+ GT VTS +++ESL+++ V + A+ G LS +G VY++ G+D
Sbjct: 3412 GYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDG 3471
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH N + ++ L V+ I+ G + AC +Y+ G G G+LGH
Sbjct: 3472 KLGHGNR-NSCDRPRVIEALRGKGVIDISCGGSHS---ACITQNHELYTWGKGRYGRLGH 3527
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G D+ P+++E + + V +G + D V +WG G YG LG G +
Sbjct: 3528 GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGC 3587
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+P V++L + V G + ++ G VY++G G+ LGH
Sbjct: 3588 KIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGH 3633
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 20/310 (6%)
Query: 47 QAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQAAA 102
Q IAG ++ AV+ G V++ G +++G+LG G PR I +L +R + +
Sbjct: 2457 QQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHS 2516
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G M ++ G+++++G+ G+ +G + P+L+++ K+ V + G+ +A
Sbjct: 2517 GGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN--CDHPKLIDTFKSSCVRDMSCGSSHSA 2574
Query: 163 VLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ G +YT+ G RLGH H +P V+ + + V+ IA G L
Sbjct: 2575 AILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQ------SFTSHRVIDIACGSRDAQTL 2628
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLG G P +E+ Q + VA GA + +
Sbjct: 2629 ALTDDG-TVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGV--CKVACGAQFSLALSTS 2685
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V TWG G Y LGHGN+ P++V L K + VA G V++ G V+++G
Sbjct: 2686 GLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGD 2745
Query: 338 GESASLGHNA 347
+ G+N
Sbjct: 2746 NDHGQQGNNT 2755
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 154/325 (47%), Gaps = 11/325 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-- 95
EA Q + G AVT++G VY+ G G+LG G T+ + + SLQ +
Sbjct: 3382 EALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVV 3441
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
R + +G M +S G VY++G+ G+ +G + + P+++E+L+ V+ +
Sbjct: 3442 RKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS--CDRPRVIEALRGKGVIDIS 3499
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G +A +++ +YT+ G RLGH + + P ++ L V+ +A G
Sbjct: 3500 CGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPK-VVEALRGNRVIDVACGSGDAQ 3558
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L C V+S G G GKLG G K P +E L+ L V G+ + +
Sbjct: 3559 TL-CLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVES--LIGLGVSKVECGSQFSVALT 3615
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG ++ PK V AL K I +ATG ++ G+VY++
Sbjct: 3616 RSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTW 3675
Query: 336 GCGESASLGH---NAIADGQVCSLL 357
G + LG NAIA ++ + L
Sbjct: 3676 GDNDEGQLGDGTTNAIARPRLVTAL 3700
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H +A+T +G VYS+GS G+LGHG T P + L G ++I+ + G+ + ++
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 171
G++Y +G+ ++G +G +LV P LV L+ ++ A G+ T + +G V+
Sbjct: 88 GELYTWGRGNYGRLGHGSSEDQLV--PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LG P + L+ + V ++ G + LAL S V++ G
Sbjct: 146 SWGDGDYGKLGRGGSDGCKNPKS-IERLQGLGVCKVYCGAQFSLALTRDGS---VWTWGK 201
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G +LGHG+ +HP+L+E ++ V V+ G+ H + G V WG G L
Sbjct: 202 GEGFRLGHGTEDHVRHPKLVEALDGKHV--VDVSVGSIHCLALTDAGEVYCWGRNDQGQL 259
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G + + P +V L + +A G +F S
Sbjct: 260 GDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWS 295
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+++ G VYS+G G+LGHG RPR I +L+G +I + G +
Sbjct: 3448 SGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSAC 3507
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ ++Y +GK +G +G +L+ P++VE+L+ V+ A G+ T L+ +
Sbjct: 3508 ITQNHELYTWGKGRYGRLGHGDSEDQLL--PKVVEALRGNRVIDVACGSGDAQTLCLTDD 3565
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
V+++ G+ +LG P VE +L + V ++ G + +AL
Sbjct: 3566 DCVWSWGDGDYGKLGRGGSDGCKIPMKVE------SLIGLGVSKVECGSQFSVALT---R 3616
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
AVY+ G G +LGHG + P+ + Q + + +A G+ H G V T
Sbjct: 3617 SGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQ--GKKVITIATGSLHCVASTDTGEVYT 3674
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
WG G LG G + P++V AL K VA G T S
Sbjct: 3675 WGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++ G+VY++G G+ +G T P LV L V++ + G+ +A ++ E
Sbjct: 30 LALTREGEVYSWGSGDGGKLGHG--DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G +YT+ GN RLGH + + + P L+ L ++ +A G LA G V+
Sbjct: 88 GELYTWGRGNYGRLGHGSSEDQLVP-VLVSGLRGHHIIDVACGSGDAHTLAAADDG-TVW 145
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G GKLG G K+P+ IE+ Q L + V GA + + +DG V TWG G
Sbjct: 146 SWGDGDYGKLGRGGSDGCKNPKSIERLQGLGV--CKVYCGAQFSLALTRDGSVWTWGKGE 203
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LGHG E+ PK+V+AL+ + V+ G +++ G+VY +G + LG
Sbjct: 204 GFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 7/284 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N QLG + P + +++ Q A G+ +S G+V+A G+ +
Sbjct: 2423 VFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGEST 2482
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G VT P+ +E+L + V + ++ G L+ EG+++++ G D +L
Sbjct: 2483 NGRLGLGPLSAN-VTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKL 2541
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH N P L+ T ++ V ++ G + A+ S +Y+ G G G+LGHG
Sbjct: 2542 GHGNRMNCDHPK-LIDTFKSSCVRDMSCGSSHSAAIL---SSGELYTWGLGEYGRLGHGD 2597
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P+ ++ F + + + + DG V +WG G +G LG G E SV
Sbjct: 2598 NYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSV 2657
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P V+ L VA G + +S G V+++G G+ LGH
Sbjct: 2658 PNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH 2701
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G HS AVTS+G +Y++G + G+LGHG++E++ P + L+G II A G+G T+
Sbjct: 77 GSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTL 136
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+D G V+++G +G + G G+ +P+ +E L+ + V + G F+ L+R+G
Sbjct: 137 AAADDGTVWSWGDGDYG--KLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDG 194
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ G RLGH TE + P L+ L+ VV ++ G + LAL VY
Sbjct: 195 SVWTWGKGEGFRLGHGTEDHVRHPK-LVEALDGKHVVDVSVGSIHCLALT---DAGEVYC 250
Query: 229 VGCGLGGKLGHGSRTDEKHPRLI 251
G G+LG P L+
Sbjct: 251 WGRNDQGQLGDIDCQIRPEPTLV 273
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T +G ++S+G G+LGHG P+ I + + + + G+ +
Sbjct: 2516 SGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAA 2575
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I +G++Y +G +G +G T L P+ V+S + V+ A G + T L+ +
Sbjct: 2576 ILSSGELYTWGLGEYGRLGHGDNYTHL--KPKKVQSFTSHRVIDIACGSRDAQTLALTDD 2633
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG P+P+ L+ V ++A G + LAL+ SG+ V+
Sbjct: 2634 GTVWSWGDGDFGKLGRGGSEGCSVPNPV-EKLQGQGVCKVACGAQFSLALST--SGL-VW 2689
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ T + P++++ + + V VA GA H V G+V WG
Sbjct: 2690 TWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKI--VDVAVGALHCLAVTDSGQVFAWGDND 2747
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+G G+ P++V L K VA G + +E
Sbjct: 2748 HGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAE 2788
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQI 207
+ VV G F A L+REG VY++ G+ +LGH T P + EP + G L V++I
Sbjct: 18 VQVVTHTDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPRE-EPTLVTG-LAGKQVIRI 74
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
+ G + A+ S +Y+ G G G+LGHGS D+ P L+ + ++ V +G
Sbjct: 75 SCGSTHSAAVT---SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSG 131
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
H DG V +WG G YG LG G + PK ++ L + V G + ++
Sbjct: 132 DAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT 191
Query: 328 EDGDVYSFGCGESASLGH 345
DG V+++G GE LGH
Sbjct: 192 RDGSVWTWGKGEGFRLGH 209
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A G V+S+G G+LG G ++ P+ I LQG+ + + GA ++
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLA 189
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G V+ +GK +G + V P+LVE+L VV ++G+ L+ G
Sbjct: 190 LTRDGSVWTWGKGEGFRLGHGTEDH--VRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALAC 219
VY + + +LG + P P L+ L + +V IA G A +C
Sbjct: 248 VYCWGRNDQGQLGDID--CQIRPEPTLVSGLASKGIVGIACGPAQSFAWSC 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G S+A+T G VY++G +LGHG + RP+ + +LQG ++I A G+
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSL 3661
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +D G+VY +G + E + G T + P+LV +L+ + + A G+ T S
Sbjct: 3662 HCVASTDTGEVYTWGDND--EGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H +A T G VY++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 3658 TGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIA 3717
Query: 110 ISDAGQVYA 118
S V A
Sbjct: 3718 WSTCKPVNA 3726
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
VV H + ++G V +WG G G LGHG+ P +V L + I ++ G
Sbjct: 20 VVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGST 79
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ V+ +G++Y++G G LGH + D V L+
Sbjct: 80 HSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLV 115
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4027
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4028 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4085
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4142
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4200
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260
Query: 344 G 344
G
Sbjct: 4261 G 4261
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4066 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4125
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4126 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4183
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4184 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4235
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4236 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4290
Query: 270 HAA 272
H+A
Sbjct: 4291 HSA 4293
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4029 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4088
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4089 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSVDGSMVW 4146
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4147 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4202
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 4203 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 4260
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4261 GLGHTNHVREPTLVTGLQGKNVRQISAG 4288
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3946 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4004
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4005 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4059
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4060 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4117
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4118 TALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4157
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 3978 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4037
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4038 GEVFSWGDGDYGKLGH 4053
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 25/324 (7%)
Query: 32 RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
++L+ E E N +++A G H++AVT G +Y+ GSN GQLGH + +
Sbjct: 39 NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 98
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 143
P ++ + + A G +M +++ GQ+Y +G DS G E + G+Q P++V
Sbjct: 99 P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 151
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 201
++L ++ +VQ + G L+ G +YT WG++ +LG P +V L+ +L
Sbjct: 152 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 209
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+P+ IA G + + SG AV+ G G+LG S+T P ++ + + ++
Sbjct: 210 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 265
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 320
+A G + + DG V T G G YG LGHG+ E VP+ V L V G
Sbjct: 266 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 324
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
+T +V G VYSFG G LG
Sbjct: 325 HTLTLVPSKGRVYSFGLGSVGQLG 348
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 21/304 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 120
+Y +G+ +G+LG G EE + P I + + + I++ A G T+ +++ GQ+YA G
Sbjct: 20 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
+ FG+ + TKL Q + ++++ + A G + L+ G++YT WG+D+
Sbjct: 80 SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 133
Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 237
+LG T+ ++ TL ++ +VQI+ GY + +AL +Y+ G G
Sbjct: 134 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 190
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
+ P L+ L+ L +A G +H+ VV + G V WG +G LG ++
Sbjct: 191 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 248
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQV 353
S P ++ + VK ++A G+ + ++ DG V++ G G LGH N I +V
Sbjct: 249 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV 308
Query: 354 CSLL 357
L+
Sbjct: 309 LELM 312
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+T+ G +Y++GSN GQLG G +P + SL G+ I A G
Sbjct: 161 QISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGY 220
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S +G V+ +GK+ FG+ G+ ++SP +++++ + V A G F+ L+
Sbjct: 221 HSFVVSKSGAVFGWGKNDFGQL--GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLT 278
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P +L L V Q+ G + L L PS
Sbjct: 279 YDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL-ELMGSTVTQVTCGRRHTLTLV--PSKGR 335
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VYS G G G+LG S + P+L+
Sbjct: 336 VYSFGLGSVGQLGTKSSINSNTPQLV 361
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS V+ G V+ +G N GQLG + P +++++ +++ A G ++ ++
Sbjct: 221 HSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYD 280
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-SREGRVYT 172
G V+ G +G+ +G ++V P+ V L V Q G T L +GRVY+
Sbjct: 281 GGVFTCGAGMYGQLGHGSFSNEIV--PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYS 338
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
F G+ +LG + N P +LG
Sbjct: 339 FGLGSVGQLGTKSSINSNTPQLVLG 363
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4203
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4351
Query: 270 HAA 272
H+A
Sbjct: 4352 HSA 4354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4090 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4263
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4322 GLGHTNHVREPTLVTVLQGKNVRQISAG 4349
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4007 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4065
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4066 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4120
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4121 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4178
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4179 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4039 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4099 GEVFSWGDGDYGKLGH 4114
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4204
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4262
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ V L+ V +A G T +S GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322
Query: 344 G 344
G
Sbjct: 4323 G 4323
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4245
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P V L + + IA
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 4297
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LAL+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4298 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4352
Query: 270 HAA 272
H+A
Sbjct: 4353 HSA 4355
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 4179
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4180 TALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4219
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4040 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4099
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4100 GEVFSWGDGDYGKLGH 4115
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPLVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIR 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4087
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4088 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4145
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSSD--G 4202
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4260
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320
Query: 344 G 344
G
Sbjct: 4321 G 4321
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 162/315 (51%), Gaps = 29/315 (9%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS IR +
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS---IRKV 460
Query: 99 QAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAI 156
++ G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV +
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSA 518
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G +A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +A
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIA 575
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 576 LS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTS 631
Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++
Sbjct: 632 TGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAW 689
Query: 336 G------CGESASLG 344
G CG+ S G
Sbjct: 690 GNNSMGQCGQGNSTG 704
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G L+S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPLVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH ++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIRKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4126 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4185
Query: 98 IQAAAGAGRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ + SD V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4186 GQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4243
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4244 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4295
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4296 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4350
Query: 270 HAA 272
H+A
Sbjct: 4351 HSA 4353
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4089 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4148
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4149 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSSDGSMVW 4206
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4207 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4262
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4263 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4320
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4321 GLGHTNHVREPTLVTVLQGKNVRQISAG 4348
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4006 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4064
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4065 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4119
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4120 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4177
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4178 TALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLG 4217
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4038 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4097
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4098 GEVFSWGDGDYGKLGH 4113
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
+ + KP+ +A LK G W + + C E Q I + +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A +G VY G G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 39 ACCRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
A C ++ Q + G +S A+T++G +Y++G + G+LGHG++E+E P + L+G
Sbjct: 544 AFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 603
Query: 95 IRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
+++I A G+G +T+ +++ GQV+++G +G + G G+ +P+LVE L+++ VV
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDVV 661
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ G+ F+ L+++G+VY++ G++ RLGH TE + P LL L+ V+ +AAG
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGST 720
Query: 213 YLLAL 217
+ LAL
Sbjct: 721 HCLAL 725
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + + Q A R +++S +G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LASLGVSQIACAEKRFLILSRSGRVYTQAYSSDAL--------------APQLVQGLVSR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+V+ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+VY++G G +G T + P+L+
Sbjct: 485 PQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKLI 542
Query: 144 ESL----KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+ VV A G+ ++A ++ EG +YT+ GN RLGH + ++ P L+ L
Sbjct: 543 SAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM-LVAGL 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ +A G LA +G V+S G G GKLG G K P+L+E+ Q L++
Sbjct: 602 KGLKVIDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K I VA G
Sbjct: 661 --VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P L ++ V Q A +LSR GRVYT ++ +DA + P L+
Sbjct: 440 VIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDA----------LAPQ-LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P+LI
Sbjct: 489 QGLVSRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKLISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
F + + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I VA +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 41/320 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL----QGIRIIQAAAGAGRTML 109
H +A+ + G VYS+G G+LGHG T P+ I + G R++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
N++C+ P + L+ + +A G +F S C
Sbjct: 736 ------SNDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWSS--------CS 781
Query: 339 ESASLGHNAIADGQVCSLLF 358
E S+G VCS+ F
Sbjct: 782 E-WSIGLRVPFVVDVCSMTF 800
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G VYS+G + +LGHGT E P+ + LQG ++I AAG+ + +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 111 SDAGQVYAFGKD 122
++ +V+++G +
Sbjct: 726 TEDSEVHSWGSN 737
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 25/324 (7%)
Query: 32 RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
++L+ E E N +++A G H++AVT G +Y+ GSN GQLGH + +
Sbjct: 20 NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 79
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 143
P ++ + + A G +M +++ GQ+Y +G DS G E + G+Q P++V
Sbjct: 80 P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 132
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 201
++L ++ +VQ + G L+ G +YT WG++ +LG P +V L+ +L
Sbjct: 133 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 190
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+P+ IA G + + SG AV+ G G+LG S+T P ++ + + ++
Sbjct: 191 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 246
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 320
+A G + + DG V T G G YG LGHG+ E VP+ V L V G
Sbjct: 247 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 305
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
+T +V G VYSFG G LG
Sbjct: 306 HTLTLVPSKGRVYSFGLGSVGQLG 329
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 21/304 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 120
+Y +G+ +G+LG G EE + P I + + + I++ A G T+ +++ GQ+YA G
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
+ FG+ + TKL Q + ++++ + A G + L+ G++YT WG+D+
Sbjct: 61 SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 114
Query: 180 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 237
+LG T+ ++ TL ++ +VQI+ GY + +AL +Y+ G G
Sbjct: 115 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 171
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
+ P L+ L+ L +A G +H+ VV + G V WG +G LG ++
Sbjct: 172 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 229
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQV 353
S P ++ + VK ++A G+ + ++ DG V++ G G LGH N I +V
Sbjct: 230 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKV 289
Query: 354 CSLL 357
L+
Sbjct: 290 LELM 293
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+T+ G +Y++GSN GQLG G +P + SL G+ I A G
Sbjct: 142 QISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGY 201
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S +G V+ +GK+ FG+ G+ ++SP +++++ + V A G F+ L+
Sbjct: 202 HSFVVSKSGAVFGWGKNDFGQL--GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLT 259
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P +L L V Q+ G + L L PS
Sbjct: 260 YDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL-ELMGSTVTQVTCGRRHTLTLV--PSKGR 316
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VYS G G G+LG S + P+L+
Sbjct: 317 VYSFGLGSVGQLGTKSSINSNTPQLV 342
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS V+ G V+ +G N GQLG + P +++++ +++ A G ++ ++
Sbjct: 202 HSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYD 261
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-SREGRVYT 172
G V+ G +G+ +G ++V P+ V L V Q G T L +GRVY+
Sbjct: 262 GGVFTCGAGMYGQLGHGSFSNEIV--PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYS 319
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
F G+ +LG + N P +LG
Sbjct: 320 FGLGSVGQLGTKSSINSNTPQLVLG 344
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+A G T ++ G V++ G + LG N +DG+
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A +
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++YT+ G+ RLGH + + P + LE Q+A G+ +AL
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YDFHQLACGHNMTVAL 492
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A + V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 493 A---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLTSR 547
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYDFHQLACGHNM 488
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 276 QDGRVCT 282
D VCT
Sbjct: 605 ADQSVCT 611
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 15/315 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--ACQPS 222
+ G++YTF G LGH P + L +++A G + A+ +
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQT 437
Query: 223 GMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 275
G V Y+ G G +LGHG +K PRL+ + LL +A G +
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
GRV T G G LG+ + + V L ++ G V++ +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553
Query: 336 GCGESASLGHNAIAD 350
G G + LGH + D
Sbjct: 554 GMGANGRLGHGDLKD 568
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+A G T ++ G V++ G + LG N +DG+
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK 517
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A +
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++YT+ G+ RLGH + + P + LE Q+A G+ +AL
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTVAL 492
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A + V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 493 A---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLTSR 547
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
D VCT + R+ C G C S KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 15/315 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--ACQPS 222
+ G++YTF G LGH P + L +++A G + A+ +
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQT 437
Query: 223 GMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 275
G V Y+ G G +LGHG +K PRL+ + LL +A G +
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
GRV T G G LG+ + + V L ++ G V++ +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553
Query: 336 GCGESASLGHNAIAD 350
G G + LGH + D
Sbjct: 554 GMGANGRLGHGDLKD 568
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 105
I+G S+ + S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 3065 ISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3124
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3125 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3182
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +YT+ G RLGH ++P + L V+Q+A G LA G A
Sbjct: 3183 SQGELYTWGLGEYGRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDG-A 3240
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3298
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3349
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG P P +L +R +Q A G ++ G+++A G
Sbjct: 4147 TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4206
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
S G G + + P L+ SL+++FV + A+ G L+ EG VY + G D +
Sbjct: 4207 SGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4264
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH + P L+ L + V IA G + A+ S V + G G G+LGHG
Sbjct: 4265 LGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAIT---SSGHVLTWGKGRYGRLGHG 4320
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 298
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4321 DSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4378
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+P +++L + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4379 CKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4428
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 113/217 (52%), Gaps = 7/217 (3%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G++G+K V P +++ + + + G+ ++S++G+V+ G + RLG N
Sbjct: 3042 GLKGSK-VKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNV 3100
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
PH L L V ++A ALA G V+S G G GKLGHG+RT PR
Sbjct: 3101 PLPHQL-PVLHQYVVKKVAVHSGGKHALALTLDG-KVFSWGEGEDGKLGHGNRTTLDKPR 3158
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E + ++ V A G+ H+A + G + TWG G YG LGHG+ + PK V AL
Sbjct: 3159 LVEALRAKKIRDV--ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALA 3216
Query: 310 DVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 344
+ I VA G D T ++EDG V+S+G G+ LG
Sbjct: 3217 GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3253
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3180
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
IS G++Y +G +G +G T+L P+ V +L V+Q A G + T L+ +
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKQVTALAGRRVIQVACGSRDAQTLALTED 3238
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+++ G+ +LG PH + L I V+QI G + LAL V+
Sbjct: 3239 GAVFSWGDGDFGKLGRGGSEGSATPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVW 3294
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3295 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3352
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G G GN P +V L+ V VA G
Sbjct: 3353 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3384
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L G+ + A G+ +
Sbjct: 4240 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 4299
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G + T ++ +
Sbjct: 4300 ITSSGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4357
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P+ + +L + V+++ G + +AL SG AVY
Sbjct: 4358 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVIKVECGSQFSVALT--KSG-AVY 4413
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHGS + P+ + Q + + +A G+ H G V TWG
Sbjct: 4414 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDAGEVYTWGDND 4471
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4472 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3161 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRV 3220
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
IQ A G+ +T+ +++ G V+++G FG + G G++ +P +E L I V+Q
Sbjct: 3221 IQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSATPHEIERLSGIGVIQIE 3278
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3279 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3337
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
A+ VY+ G G+ G G+ K P L+
Sbjct: 3338 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3370
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 140/295 (47%), Gaps = 8/295 (2%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 113
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4192 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4251
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 4252 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTW 4309
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4310 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4367
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
GKLG G K P IE L L + V G+ + + + G V TWG G + LGH
Sbjct: 4368 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4425
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G+ + PK V AL K I +ATG S+ G+VY++G + LG +
Sbjct: 4426 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTV 4480
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V +G N QLG + P +++ +R I + G+ ++S G+V+A G+
Sbjct: 3028 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEG 3087
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 180
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3088 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3145
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LGH +P L+ L + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3146 LGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3201
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 298
+ P+ + L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3202 DNATQLKPKQVTA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3259
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ P ++ L+ + I + G + ++ G+V+++G G+ LGH
Sbjct: 3260 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T G +Y++G + G+LGHG ++++ P + +L II A G+G ++
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSL 733
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G VYA+G +G+ G + L P LVE+L + + A G + L+ EG
Sbjct: 734 CLTSEGLVYAWGDGDYGKLGNGNCNSSL--QPILVETLPRVQRIFA--GAQSSMALTTEG 789
Query: 169 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 217
+Y SWG + LGH V+ P L+ +L++ +V +A G + LAL
Sbjct: 790 HLY--SWGKASCLGHQQVERSVQGCSVPR-LVSSLQHKRLVDVAVGVAHCLAL 839
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3276 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3335
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3336 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3385
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 21/277 (7%)
Query: 81 EEEWRPRPIRSLQGIRIIQAAAGA-GRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVT 138
+ E P+PI L I+ A GR L D+ + Y++G +G + V
Sbjct: 599 KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP 658
Query: 139 SP--QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ L +K +F G ++A ++ G +YT+ G RLGH + P ++
Sbjct: 659 TKISALDRCVKAVFC-----GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP-AIV 712
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L ++ +A G +L G+ VY+ G G GKLG+G+ P L+E
Sbjct: 713 MALAEYEIIDVALGSGDAHSLCLTSEGL-VYAWGDGDYGKLGNGNCNSSLQPILVETLPR 771
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVK 312
+ + AGA + + +G + + WG+ CLGH E SVP++V +L +
Sbjct: 772 VQ----RIFAGAQSSMALTTEGHL--YSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKR 825
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+ VA G ++ G+V+ +G +S + ++++
Sbjct: 826 LVDVAVGVAHCLALTSCGEVFGWGRNDSQQICPSSVS 862
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G HS+ +TS+G+VY++G G+LG+G +P + +L R+ + AGA +M
Sbjct: 727 SGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLP--RVQRIFAGAQSSMA 784
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ G +Y++GK S + E VQG + P+LV SL++ +V A+G L+
Sbjct: 785 LTTEGHLYSWGKASCLGHQQVERSVQGCSV---PRLVSSLQHKRLVDVAVGVAHCLALTS 841
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLL 196
G V F WG ND++ P+ V PLL
Sbjct: 842 CGEV--FGWGRNDSQ---QICPSSVSCEPLL 867
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
Y + K PQ +E L ++ A G F A+ S Y++ G D RLGH
Sbjct: 593 YNCRLGKPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRN-AYSWGAGEDHRLGHGD 651
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
P + + V Y + + +Y+ G G G+LGHG+ D+
Sbjct: 652 THARAVPTKISALDRCVKAVFCGCSYSAAITWSGN-----LYTWGRGTYGRLGHGNSDDQ 706
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
P ++ + V + +G H+ + +G V WG G YG LG+GN P +V
Sbjct: 707 CVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV 766
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+ L V+ I G ++ ++ +G +YS+ G+++ LGH +
Sbjct: 767 ETLPRVQRIFA--GAQSSMALTTEGHLYSW--GKASCLGHQQV 805
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 17/238 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 112
H +A+ S YS+G+ +LGHG T P I +L R ++A G + I+
Sbjct: 626 HFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALD--RCVKAVFCGCSYSAAITW 683
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
+G +Y +G+ ++G +G + V P +V +L ++ A+ G+ + L+ EG V
Sbjct: 684 SGNLYTWGRGTYGRLGHGNSDDQCV--PAIVMALAEYEIIDVALGSGDAHSLCLTSEGLV 741
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 229
Y + G+ +LG+ + ++P +E +P VQ I AG +AL + +
Sbjct: 742 YAWGDGDYGKLGNGNCNSSLQPI----LVETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
C LG + S PRL+ Q L V VA G H + G V +GWGR
Sbjct: 798 SC-LGHQQVERSVQGCSVPRLVSSLQHKRL--VDVAVGVAHCLALTSCGEV--FGWGR 850
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P L+ Q + ++ V V +G H + +G V WG G G LGHGN PK+V+
Sbjct: 4222 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4281
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LN + +A G + ++ G V ++G G LGH D
Sbjct: 4282 LNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSED 4324
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 33/322 (10%)
Query: 58 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G + G L GT E PRP+ S + + Q G L+
Sbjct: 216 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 275
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 276 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 333
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 334 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 388
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
++ G G G LGHG+R +P+ + Q LN L+ V VA WH A V+GQ
Sbjct: 389 FTFGDGAFGVLGHGNRESVSYPK---EVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 445
Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++
Sbjct: 446 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 505
Query: 336 GCGESASLGHNAIADGQVCSLL 357
G LG N+I+DG++ L+
Sbjct: 506 GGTAHGQLG-NSISDGKLPCLV 526
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 25/275 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ V++ G ++S+G ++ G LGHG+ W P+ + L+G++++ A G +
Sbjct: 320 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 379
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 155
L + G+++ FG +FG +G + + V+ P+ V+SL + V+ A
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 437
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+G T++ SR +++T+ G+ RLGH + + P + +L + +IA G+ + +
Sbjct: 438 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 494
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG V+++G G+LG+ S +D K P L+ Q +L+ +A GA H AV+
Sbjct: 495 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 549
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V TWG G G LGHG+ E + P +V+AL D
Sbjct: 550 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRD 584
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G + S ++++G +LGHG E P + SL + A G T+ ++
Sbjct: 439 GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT 498
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 171
+G V+ G + G+ + KL P LV+ L FV + A G AVL+ V+
Sbjct: 499 SGHVFTMGGTAHGQLGNSISDGKL---PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVF 555
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
T+ G + RLGH + P L+ L + V ++ G + ++
Sbjct: 556 TWGKGANGRLGHGDTEDKRTP-TLVEALRDRHVKSLSCGSNFTSSI 600
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 47 QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ IA H +AV TS+ V+++G ++G+LGHG TE++ P + +L+ + + G+
Sbjct: 536 EEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSN 595
Query: 106 RTMLI 110
T I
Sbjct: 596 FTSSI 600
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG + P ++
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ GD T V+++DG V++FG S LG++ +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE 275
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LND+K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG 176
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 18/290 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
+ A+ + G V+++G NS GQLG+G T P P++++ R + A+GA + +S G
Sbjct: 714 TFALRADGTVWAWGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDG 771
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V++FG +S G+ Y +G+ TSP+ + + I V A G F+ LS +G V+ +
Sbjct: 772 SVFSFGSNSRGQLGY--EGSATQTSPRWLTGPECIEAV--AAGALFSLALSCDGGVWAWG 827
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+LG P + G VV IAAG + LA+ + V++ G
Sbjct: 828 DNGSGQLGDGAVTARTAPARVPGLAH---VVAIAAGSDHALAVRADGT---VWAWGANGS 881
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ T P +++ + V VA G+ H+ V DG V WG G LG G
Sbjct: 882 GQLGDGTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDG 937
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++P V L+ V+AI A+G + ++E G V+++G S LG
Sbjct: 938 TTTSRTLPVFVSTLSGVQAI--ASGAQHSLALAEGGVVWAWGANGSGQLG 985
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 143/302 (47%), Gaps = 20/302 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTM 108
AG HS+A+ S G V+++G NS GQLG G T PR + G+ +I AAG ++
Sbjct: 507 AGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRG--PRAPAVVPGLAVITHVAAGLFHSL 564
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-GNFFTAVLSRE 167
+ +GQV+A+G + +G+ G ++ V P V L +QA + G ++ L +
Sbjct: 565 ALDSSGQVWAWGDNVYGQLGDGSTTSRNV--PGRVSGLP--AGIQAIVAGPSYSVALGAD 620
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+T+ ++ +LG T P P ++P +A +A +GM ++
Sbjct: 621 GSVWTWGENSNGQLGDGT--TTARPVP---ARVSLPATLVALSTRGSHTVALDTTGM-LW 674
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G + G+LG+G+ E PR + F + A+G + DG V WG
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRVPSFARVQ----GFASGLRTTFALRADGTVWAWGDNS 730
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG+G VP VQA+ + + +A+G VS DG V+SFG LG+
Sbjct: 731 LGQLGNGATSASPVP--VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEG 788
Query: 348 IA 349
A
Sbjct: 789 SA 790
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ VT G V+++G+N+ GQLG G+T + P + L G+ + AAG +M
Sbjct: 55 AGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAV--AAGNTHSMA 112
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+ +G ++ G+ GV + P V L + + A GN + L G
Sbjct: 113 LREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGVTAI--AAGNLHSLAL-INGA 166
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN+ +LG + + P + G E VV IAAG + LAL + V+
Sbjct: 167 VW--AWGNNTTGQLGDGSSTSRSTPAKVAGLTE---VVAIAAGDFHSLALKRDGT---VW 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD---GRVCTWG 284
+ G G+LG G+ P + + V +A G H+ G+V WG
Sbjct: 219 AWGGNYSGQLGDGTLDSRSTPVRVSGLTGI----VALAGGGSHSVAASSTTLGGKVWAWG 274
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG+G + +P V L V A+ A+G + + D V+++G
Sbjct: 275 DNTYGQLGNGGDVSSLLPLEVPGLTQVVAL--ASGTSHSLALRGDDSVWAWG 324
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 21/296 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTMLISD 112
H +AV+S G V+SFGSNS GQLG+ + + P R L G I+A AAGA ++ +S
Sbjct: 763 HVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSP---RWLTGPECIEAVAAGALFSLALSC 819
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+A+G + G + G T+P V L ++ + A G+ + +G V+
Sbjct: 820 DGGVWAWGDN--GSGQLGDGAVTARTAPARVPGLAHVVAI--AAGSDHALAVRADGTVWA 875
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ +LG T + P + E + VV +A G + LA+ + V++ G
Sbjct: 876 WGANGSGQLGDGTTTSRAVP---MQVKELVDVVAVAGGSGHSLAVRADGT---VWAWGAN 929
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G+ T P + + +A+GA H+ + + G V WG G LG
Sbjct: 930 GSGQLGDGTTTSRTLPVFVSTLSGVQ----AIASGAQHSLALAEGGVVWAWGANGSGQLG 985
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G + P V L+ V+ + VA ++ + G V+S+G + LG +
Sbjct: 986 DGTTTSRTRPVQVSGLSGVQGL-VAGASFSLALT--PGKVWSWGNNSAGQLGDGTL 1038
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 138/302 (45%), Gaps = 28/302 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ S G V+++G N+ GQLG T RP P + + AAG ++ +
Sbjct: 461 HSLALRSDGTVWAWGDNAYGQLGD--TSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSD 518
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G +S+G+ G + +P +V L + A G F + L G+V+
Sbjct: 519 GTVWTWGDNSYGQLGAGAT-PRGPRAPAVVPGLA--VITHVAAGLFHSLALDSSGQVW-- 573
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSV 229
+WG++ +LG + + P G + +P + I AG Y +AL S V++
Sbjct: 574 AWGDNVYGQLGDGSTTSRNVP----GRVSGLPAGIQAIVAGPSYSVALGADGS---VWTW 626
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 287
G G+LG G+ T P + +L +VA + V D W WGR
Sbjct: 627 GENSNGQLGDGTTTARPVPARV------SLPATLVALSTRGSHTVALDTTGMLWAWGRNV 680
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG+G ES P+ V + V+ A+G TTF + DG V+++G LG+ A
Sbjct: 681 SGQLGNGTLVSESTPRRVPSFARVQGF--ASGLRTTFALRADGTVWAWGDNSLGQLGNGA 738
Query: 348 IA 349
+
Sbjct: 739 TS 740
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
R P S+QG R + AAG ++ ++ AG V+A+G ++ G + G T ++P V
Sbjct: 39 RRAPAISVQG-RPYRLAAGLNHSLYVTPAGTVWAWGANAQG--QLGEGSTLQHSTPTQVV 95
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
L + V A GN + L EG V+T+ D +LG V P + G V
Sbjct: 96 GLTGVTAV--AAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV-PAQVAGLTG---V 149
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
IAAG + LAL AV++ G G+LG GS T P + + V +
Sbjct: 150 TAIAAGNLHSLALING----AVWAWGNNTTGQLGDGSSTSRSTPAKVAGLT----EVVAI 201
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-----HVATG 319
AAG +H+ + +DG V WG G LG G + S P V L + A+ H
Sbjct: 202 AAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAA 261
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
TT G V+++G LG+ G V SLL L + Q+
Sbjct: 262 SSTTL----GGKVWAWGDNTYGQLGNG----GDVSSLLPLEVPGLTQV 301
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV + G V+++G+N SGQLG GTT P ++ L + ++ A G+G ++
Sbjct: 859 AGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL--VDVVAVAGGSGHSLA 916
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G ++ T P V +L + + A G + L+ G
Sbjct: 917 VRADGTVWAWGANGSGQLGDGTTTSR--TLPVFVSTLSGVQAI--ASGAQHSLALAEGGV 972
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 228
V+ + +LG T + P + G + VQ + AG + LAL V+S
Sbjct: 973 VWAWGANGSGQLGDGTTTSRTRPVQVSG----LSGVQGLVAGASFSLALTPGK----VWS 1024
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
G G+LG G+ P V ++AGA H V+ D +WG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPGAGPTLSSF----VALSAGAQHTVVLRSDDSFLSWG 1076
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+++G N SGQLG GT + R P+R + G+ I A AG G +
Sbjct: 203 AGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS--RSTPVR-VSGLTGIVALAGGGSHSV 259
Query: 110 ISDA----GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ + G+V+A+G +++G+ G + L+ P V L + A+ + + L+
Sbjct: 260 AASSTTLGGKVWAWGDNTYGQLGNGGDVSSLL--PLEVPGLTQVV----ALASGTSHSLA 313
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G ++WG++A+ V+ P+ +G ALAC G A
Sbjct: 314 LRGDDSVWAWGDNAQAQTAQTGTSVQRVPVR-----------VSGVSDAQALAC---GNA 359
Query: 226 VYSVGCG----LG------GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
VG G LG G+LG+GS + P + +AAG H +
Sbjct: 360 FSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLT----AGASLAAGDHHVFLRQ 415
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG V WG YG LG G P ++ L V+A+ ++ Y + + DG V++
Sbjct: 416 ADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASS--YHSLALRSDGTVWA 473
Query: 335 FGCGESASLGHNA 347
+G LG +
Sbjct: 474 WGDNAYGQLGDTS 486
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ +G V+++G+N+ GQLG G ++ P + L G+ I AAG ++
Sbjct: 105 AGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRS-VPAQVAGLTGVTAI--AAGNLHSLA 161
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+A+G ++ G+ G ++ ++P V L + + A G+F + L R+G
Sbjct: 162 LIN-GAVWAWGNNTTGQLGDGSSTSR--STPAKVAGLTEVVAI--AAGDFHSLALKRDGT 216
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +LG T + P + G +V +A G + +A + G V++
Sbjct: 217 VWAWGGNYSGQLGDGTLDSRSTPVRVSGLTG---IVALAGGGSHSVAASSTTLGGKVWAW 273
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG----- 284
G G+LG+G P + Q V +A+G H+ + D V WG
Sbjct: 274 GDNTYGQLGNGGDVSSLLPLEVPGLT----QVVALASGTSHSLALRGDDSVWAWGDNAQA 329
Query: 285 -------------------------------------------WGRYGC--LGHGNEECE 299
WG G LG+G+
Sbjct: 330 QTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVR 389
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
++P V +L +A GD+ F+ DG V+++G LG + + +
Sbjct: 390 ALPGRVPSL--TAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS-RPAPVRLS 446
Query: 360 SIFQYLQIWLNLSSYRHL 377
S ++ L+ SSY L
Sbjct: 447 STLTSVRA-LSASSYHSL 463
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 19/288 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+A++ G V+++G N SGQLG G R P R ++ AAG+ +
Sbjct: 809 AGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA--RTAPARVPGLAHVVAIAAGSDHALA 866
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G ++ V P V+ L + VV A G+ + + +G
Sbjct: 867 VRADGTVWAWGANGSGQLGDGTTTSRAV--PMQVKEL--VDVVAVAGGSGHSLAVRADGT 922
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +LG T + P + TL + IA+G + LALA G V++
Sbjct: 923 VWAWGANGSGQLGDGTTTSRTLPV-FVSTLSGVQA--IASGAQHSLALA---EGGVVWAW 976
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T P ++ L +Q +V A ++ G+V +WG G
Sbjct: 977 GANGSGQLGDGTTTSRTRP--VQVSGLSGVQGLVAGA---SFSLALTPGKVWSWGNNSAG 1031
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
LG G S P L+ A+ + G T V+ D S+G
Sbjct: 1032 QLGDGTLNSRSQPGAGPTLSSFVAL--SAGAQHTVVLRSDDSFLSWGT 1077
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
QAIA G HS+A+ GVV+++G+N SGQLG GTT RP + L G++ + AGA
Sbjct: 955 QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGL--VAGAS 1012
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ ++ G+V+++G +S G+ G ++ + P +L + + A G T VL
Sbjct: 1013 FSLALTP-GKVWSWGNNSAGQLGDGTLNSR--SQPGAGPTLSSFVALSA--GAQHTVVLR 1067
Query: 166 REGRVYTFSWGN 177
+ SWG
Sbjct: 1068 SDDSF--LSWGT 1077
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI------AGPGHSIA 57
+ + KP+ +A LK G W + + C E Q I G G+ +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGGAGNEVL 64
Query: 58 VTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T+ ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A SG VY G G
Sbjct: 184 NNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTM 108
G H++A+TS G VYS+G S GQLGHG + P+ I + R + + G +
Sbjct: 57 GSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSA 116
Query: 109 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ G +Y +G+ +G+ EY L + E +V+ + G TA L
Sbjct: 117 AVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAAL 176
Query: 165 SREGRVYTFSWGNDARLGHHT----EPND------VEPHPLLGTLENIPVVQIAAGYCYL 214
+ GRVY + G+ +LG + +P + PH LL VVQ+A G +
Sbjct: 177 TSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPH-LLKAFNGEKVVQVACGAFHS 235
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
A+ Q VY G G LG G +D++ P+ +E F ++ + V+ G WH VV
Sbjct: 236 AAVTEQGH---VYVWGKEDYGMLGVGQSSDQQIPKRLEYFD--DIPVLRVSCGGWHTVVV 290
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G +G G YG LG G+ + + P +V+AL I A G T V+ DG Y
Sbjct: 291 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYV 350
Query: 335 FGCGESASLG 344
G + LG
Sbjct: 351 AGRPDHGRLG 360
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 36/314 (11%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTM 108
S+ VV +FG N GQLG G P+ I +L I+ + G+ TM
Sbjct: 3 NSECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTM 62
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSR 166
++ +G VY++G S G+ +G K++ PQ + + + V + G +A +++
Sbjct: 63 ALTSSGAVYSWGWGSMGQLGHG--DLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTK 120
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIP-------VVQIAAGYCYLLALA 218
+G +Y WG ++ G P + E H L +P +V+++ G + AL
Sbjct: 121 DGTLYV--WG-ESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT 177
Query: 219 CQPSGMAVYSVGCGLGGKLGHGS--RTDEKHPRLI-----EQFQLLNLQPVV-VAAGAWH 270
S VY G G G+LG GS D ++ L+ + N + VV VA GA+H
Sbjct: 178 ---SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFH 234
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+A V + G V WG YG LG G + +PK ++ +D+ + V+ G + T VV++ G
Sbjct: 235 SAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSG 294
Query: 331 DVYSFGCGESASLG 344
D Y+FG GE LG
Sbjct: 295 DCYAFGRGEYGRLG 308
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS AVT +G VY +G G LG G + ++ P+ + I +++ + G
Sbjct: 227 QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWH 286
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T++++ +G YAFG+ +G G+ TK T P LV++LK V+QAA G T ++
Sbjct: 287 TVVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTS 344
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+G Y + RLG P L L IPV Q +AG + +AL
Sbjct: 345 DGTAYVAGRPDHGRLGLADMKALGVPTRL--DLGPIPVRQFSAGGAHSVAL 393
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 22/264 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-------PRPIRSLQGIRIIQAAAGAGR 106
HS AVT G +Y +G + GQLG E P P G I++ + G
Sbjct: 114 HSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMP-EGEAGETIVKVSCGGTH 172
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL--------VTSPQLVESLKNIFVVQAAIGN 158
T ++ G+VY +G+ G+ G K + P L+++ VVQ A G
Sbjct: 173 TAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGA 232
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
F +A ++ +G VY + + LG + +D + L ++IPV++++ G + + +A
Sbjct: 233 FHSAAVTEQGHVYVWGKEDYGMLG-VGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVA 291
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG Y+ G G G+LG G P L++ + + + A G H V DG
Sbjct: 292 --KSG-DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTV--IQAACGGSHTLFVTSDG 346
Query: 279 RVCTWGWGRYGCLGHGNEECESVP 302
G +G LG + + VP
Sbjct: 347 TAYVAGRPDHGRLGLADMKALGVP 370
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ V G Y+FG G+LG G T+ RP +++L+G +IQAA G T+ ++
Sbjct: 286 HTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSD 345
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
G Y G+ G G+ K + P ++ L I V Q + G + L R
Sbjct: 346 GTAYVAGRPDHG--RLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVALMHSSR 398
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
I T VYS G+N+SG LG G PR + S G +II +AG+G ++++ G
Sbjct: 59 IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
VY++G +S+ + G GT TSP L+ + VVQ A G+ + L+ EG VYT+
Sbjct: 119 GVYSWGHNSY--MQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWG 176
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + + N ++ I G L C VYS G
Sbjct: 177 YNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSL---CVTDSGEVYSWGYNGN 233
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ +P + Q + + VV G HA + +G V WG YG LG G
Sbjct: 234 GQLGVGNNVNQTNPCRVAALQGVVIAQVV--CGYAHALALTDNGVVFGWGANSYGQLGSG 291
Query: 295 NEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
N+ P +V + V + +++ ++ G +Y +G
Sbjct: 292 NKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 17/243 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+GP H + +T G VYS+G NS QLG+G T P + +++Q A G+ +M
Sbjct: 107 SGP-HVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
++ G+VY +G ++ G+ G + SP+ V + + N ++ G + ++ G
Sbjct: 166 LTTEGEVYTWGYNNCGQIGSGSTANQ--GSPRKVTACIGNKRIIDITCGQTTSLCVTDSG 223
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY++ + + +LG N P + L+ + + Q+ GY + LAL V+
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNP-CRVAALQGVVIAQVVCGYAHALALT---DNGVVFG 279
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 284
G G+LG G++ + P Q+ VV A H +A Q G + WG
Sbjct: 280 WGANSYGQLGSGNKANTCTP-----LQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Query: 285 WGR 287
R
Sbjct: 335 QLR 337
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAG 105
Q G HS+A+T++G VY++G N+ GQ+G G+T + PR + + G RII G
Sbjct: 155 QIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQT 214
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ ++D+G+VY++G + G + GV T+P V +L+ + + Q G L+
Sbjct: 215 TSLCVTDSGEVYSWGYN--GNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEP 192
G V F WG ++ +LG + N P
Sbjct: 273 DNGVV--FGWGANSYGQLGSGNKANTCTP 299
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN-FFTAVLSREGRVYTF 173
+VY+ G ++ G G + L P+L+ES ++ + G+ VL+++G VY
Sbjct: 66 KVYSLGTNTSGCLGVGDNSSSL--EPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVY-- 121
Query: 174 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG+++ +LG+ P L + N VVQIA G + +AL + VY+ G
Sbjct: 122 SWGHNSYMQLGNGGTSPGTSPSLLSRNISN-KVVQIACGSHHSMALTTEGE---VYTWGY 177
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G++G GS ++ PR + + N + + + G + V G V +WG+ G L
Sbjct: 178 NNCGQIGSGSTANQGSPRKVTAC-IGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQL 236
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G GN ++ P V AL V V G ++++G V+ +G LG
Sbjct: 237 GVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLG 289
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS+G G LG G + PRL+E F + + +G H V+ QDG V +WG
Sbjct: 67 VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGP-HVLVLTQDGGVYSWGH 125
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
Y LG+G + P ++ K + +A G + + ++ +G+VY++G +G
Sbjct: 126 NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGS 185
Query: 346 NAIAD 350
+ A+
Sbjct: 186 GSTAN 190
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q + G H++A+T GVV+ +G+NS GQLG G P + + G + AA
Sbjct: 259 AQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTPLQVATRIGRVVCLAATHYS 318
Query: 106 RTMLISD-AGQVYAFGK 121
+ + +G +Y +G+
Sbjct: 319 HSSAARNQSGHIYMWGQ 335
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
D +V + G GCLG G+ P+++++ + K I ++ G V+++DG VYS+
Sbjct: 64 DEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSW 123
Query: 336 GCGESASLGHNAIADGQVCSLLFLSI 361
G LG+ + G SLL +I
Sbjct: 124 GHNSYMQLGNGGTSPGTSPSLLSRNI 149
>gi|392423407|ref|YP_006464398.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus acidiphilus SJ4]
gi|391357873|gb|AFM43571.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus acidiphilus SJ4]
Length = 1910
Score = 108 bits (270), Expect = 4e-21, Method: Composition-based stats.
Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S AG GH++AV S V+S GSN+ GQLG+ +T P + L I+ +AG
Sbjct: 334 STIAAGSGHTLAVRSDSTVWSAGSNTFGQLGNNSTANSSTPVQVSGLSS--IVGVSAGDS 391
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + G V+ +G+ + G+ G ++P V L NI V + G + L
Sbjct: 392 TSMALRSDGIVFVWGRGTEGQLGNGTYSNS--STPVQVPGLSNI--VSISCGGYHCMALR 447
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGM 224
++G V+ + +G + LG++T P ++N+P + I AG + LA+A +
Sbjct: 448 KDGAVFVWGYGYNGELGNNTYSCSATPL----QVQNLPKITCIGAGAYHCLAVAYDGT-- 501
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+S G G+LG G+ T+ P ++ + N + V+ G +H+ + DG WG
Sbjct: 502 -CWSWGYNNYGQLGDGTTTNRSIP--VQVIGITNAK--FVSGGMYHSVLQSTDGSFYGWG 556
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
W YG LG G+ VP + + VA G Y+T ++ D VYS G G LG
Sbjct: 557 WNAYGQLGKGDNGDSYVPAGMVGWSGQSI--VACG-YSTTIIGNDNTVYSTGYGGDGQLG 613
Query: 345 H 345
+
Sbjct: 614 N 614
Score = 92.0 bits (227), Expect = 4e-16, Method: Composition-based stats.
Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AAG+G T+ + V++ G ++FG+ G T ++P V L +I V A G+
Sbjct: 337 AAGSGHTLAVRSDSTVWSAGSNTFGQ--LGNNSTANSSTPVQVSGLSSIVGVSA--GDST 392
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ L +G V+ + G + +LG+ T N P + G L NI + +C +A +
Sbjct: 393 SMALRSDGIVFVWGRGTEGQLGNGTYSNSSTPVQVPG-LSNIVSISCGGYHC----MALR 447
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G AV+ G G G+LG+ + + P Q+ NL + + AGA+H V DG
Sbjct: 448 KDG-AVFVWGYGYNGELGNNTYSCSATP-----LQVQNLPKITCIGAGAYHCLAVAYDGT 501
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+WG+ YG LG G S+P VQ + A V+ G Y + + S DG Y +G
Sbjct: 502 CWSWGYNNYGQLGDGTTTNRSIP--VQVIGITNAKFVSGGMYHSVLQSTDGSFYGWGWNA 559
Query: 340 SASLGHNAIADGQV 353
LG D V
Sbjct: 560 YGQLGKGDNGDSYV 573
Score = 38.5 bits (88), Expect = 5.4, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 45 NSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
+ Q+I G+S + + VYS G GQLG+GT + + +RI
Sbjct: 581 SGQSIVACGYSTTIIGNDNTVYSTGYGGDGQLGNGTNNTSYTFVSTGLINTLRIASGPYD 640
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA--IGNFFT 161
+ I+ + +G++++G +YG T +P S KNI + + ++
Sbjct: 641 CRTVLAITADYSAHVWGQNAYG--QYGDMNTVNSNTPTDYASTKNIAKALSVNQQNDQYS 698
Query: 162 AVLSREGRVYTFSWGNDA 179
+L +G V+ +WGN+
Sbjct: 699 MLLKSDGSVW--AWGNNG 714
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L I+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 335
G + E + + ++ A + DV+ H+ G Y FV + + F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG + P ++
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ GD T V+++DG V++FG S LG++ +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE 275
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LND+K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 18/296 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ S G V+++G N GQLG GTT P +++L G II ++G ++
Sbjct: 232 AGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLA 289
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ D G V+A+G + G+ G +K + P V+ L I V + G +++ L +G
Sbjct: 290 LKDDGTVWAWGDNESGQLGDGTTNSKYI--PSQVQGLSGI--VSISCGFYYSMALKNDGT 345
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +LG T + P+ G L+ V+ IA G + +AL + V++
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAVPVSG-LDG--VIAIACGVNHSMALRNDGT---VWTW 399
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G++ + I + + + G H+ + DG V WG +YG
Sbjct: 400 GFNAFGQLGDGTKVSKNTAVPISGLDGI----IAITCGTSHSMALKDDGTVWAWGDNQYG 455
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
LG+G + P V L+ +K+I G T+F + DG V+++G E LG
Sbjct: 456 QLGNGTFISNTTPSQVSNLSGIKSIFC--GYSTSFALKPDGTVWAWGNNEYGELGK 509
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 144/297 (48%), Gaps = 22/297 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++A+ S G V++ G N GQLG+ T + P P+ L + I +AG +M +
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAGKYYSMAL 240
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G V+ +G++ +G+ G T+L SP V++L I + + GN + L +G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRL--SPVQVQNLSGIIAISS--GNSHSLALKDDGTV 296
Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+ +WG++ +LG T + P + G L I V I+ G+ Y +AL + V+
Sbjct: 297 W--AWGDNESGQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMALKNDGT---VWV 348
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ TD + + + +A G H+ + DG V TWG+ +
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDGV----IAIACGVNHSMALRNDGTVWTWGFNAF 404
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G + ++ + L+ + AI T + + +DG V+++G + LG+
Sbjct: 405 GQLGDGTKVSKNTAVPISGLDGIIAITCGTSH--SMALKDDGTVWAWGDNQYGQLGN 459
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 26/301 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+S+A+ + G V+ +G N+SGQLG GTT + P+ L G+ I A G +M + +
Sbjct: 336 YSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGV--IAIACGVNHSMALRND 393
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G ++FG+ G + +K P + L I + G + L +G V+
Sbjct: 394 GTVWTWGFNAFGQLGDGTKVSKNTAVP--ISGLDGIIAITC--GTSHSMALKDDGTVW-- 447
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSVG 230
+WG++ +LG+ T ++ P + L I + +C Y + A +P G V++ G
Sbjct: 448 AWGDNQYGQLGNGTFISNTTPSQV-SNLSGIKSI-----FCGYSTSFALKPDG-TVWAWG 500
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G+LG G T R+I + LN+ + ++ G+ H + DG V WG RYG
Sbjct: 501 NNEYGELGKGFTT-----RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYG 555
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G +S+P V ++ + AI + G + + DG V+++G LG
Sbjct: 556 QLGDGTTTIKSLPVQVSGISGITAI--SAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKE 613
Query: 350 D 350
D
Sbjct: 614 D 614
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 37/301 (12%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V+++G N+ GQLG GT E+ P + L GI +I R+
Sbjct: 582 AGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNC--IYRSFA 639
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V+ +G DS Y + K+ T P + L I ++ G + L +G
Sbjct: 640 LKNDGTVWVWGSDS-----YNLPLEKM-TMPIQISGLSGIIAIEC--GTYHNLALKNDGT 691
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N + G T T NIP VQ+ +G + A+A + S+
Sbjct: 692 VWAWGKNNFGQFGDGTT-----------TTTNIP-VQV-SGLSGVKAIAVGGN----RSI 734
Query: 230 GCGLGGKLGHGSRT-DEKHPRLIEQF----QLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
G + R P +E + Q+ L +V + + + DG+V TWG
Sbjct: 735 ALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSIS---NNVALKNDGKVFTWG 791
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG G V L V VA+ D T+ V+ DG + ++G LG
Sbjct: 792 ANDYGQLGDGTTTARVTVAPVSGLEGVAG--VASSDTTSMVLMNDGTIRAWGKNNFGQLG 849
Query: 345 H 345
+
Sbjct: 850 N 850
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
I +++A+ + G V+++G+N GQLG GTT P+ L+G+ + A+ +M
Sbjct: 772 IVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGV--ASSDTTSM 829
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQG 133
++ + G + A+GK++FG+ G +G
Sbjct: 830 VLMNDGTIRAWGKNNFGQLGNGERG 854
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 261 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
P++ V+ G H + DG V G YG LG+ N + P V+ LN V +I + G
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAG 233
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
Y + + DG V+++G + LG A
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTA 263
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 18/291 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+Y +G N GQLG G+ P PI + Q + I A+G T+ ++ +VY+ G +
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
FG+ G Q ++ P LV + A G+FF+ ++ G + F WG
Sbjct: 59 EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ + + LL + + VVQ+A G + +AL + + + S G G+LG GS
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169
Query: 243 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 299
E P +I LN P+ + AGA+H+ V+ G + TWG +G LGHGN + +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
S P++V+ L + + VA G+ + + +G V+S+G G + LGHN++A+
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN 277
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++ +TS VYS GSN GQLG + + RP + I AAG ++
Sbjct: 38 SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+++G ++ +G+ GE + + P+L++ + + VVQ A G L+ EG
Sbjct: 96 IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ SWG++ + LG +E +EP ++ +L P+ QI AG + L+ PSG
Sbjct: 153 I--LSWGSNTQGQLGLGS-SEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205
Query: 226 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+++ G G+LGHG S + + PRL++ L + + V VA G H+ ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVKT--LRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G LGH + + PK + L + G T +++ + FG + LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Query: 345 -HN 346
HN
Sbjct: 324 THN 326
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q G H IA+T +G + S+GSN+ GQLG G++E E+ P I SL I Q AGA
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S +G ++ +GK+++G+ +G +SP+LV++L++ VV A+G + +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
R G V+++ G + +LGH++ N +P ++ L V QI G + ++L
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G +LG + T + P I + Q +AAG + Q+ C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
SQ AG HS ++ G ++++G N+ GQLGHG ++ + PR +++L+ ++ A G
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ + G V+++G G + G VT P+ + L V Q G T L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ + ++ F ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 46/330 (13%)
Query: 40 CCRRENSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLG------HGTTEEEWRPRPIR 90
C ++ Q IA G H++ +T +G VY+ G N GQLG H E P
Sbjct: 36 CKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDE 95
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+ + AAG + IS+ G+VY +G+++ G+ G +G V + Q VESLK+
Sbjct: 96 A----KFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFR 151
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH------------HTEPNDVEPHPLLGT 198
+ A+G + LS EG V ++ + RLGH + ++ P L+
Sbjct: 152 IQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPR-LVKG 210
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
++ V ++AAG L AC ++++ G G +LG G D P+ +
Sbjct: 211 FRDVKVSKVAAG---LTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRV------- 260
Query: 259 LQPVV-----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQ-ALND 310
PV+ +A G +H + ++G++ WG YGCLG G ++ S+P +V+ AL
Sbjct: 261 --PVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALES 318
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
++ V G T ++ DGDV+++G G S
Sbjct: 319 LRVTQVQCGWKHTMALTVDGDVFAWGWGGS 348
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 30/296 (10%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG + E W P +S+Q ++ I A G T+++++ G+VYA G + +G+
Sbjct: 14 WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQ 73
Query: 127 AEYGVQGTKLVTSPQL----VESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G L T + VE L + A G+F +A +S +GRVY + +L
Sbjct: 74 L-----GLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQL 128
Query: 182 GHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
G V + +L++ + +A G + LAL+ + V S G L G+LGHG
Sbjct: 129 GLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGE---VLSWGTSLNGRLGHG 185
Query: 241 S------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
++ E PRL++ F+ +++ VAAG H+A + + G + T+G GR
Sbjct: 186 EGHRSSSMFSIFRKSSEYTPRLVKGFR--DVKVSKVAAGLTHSACLDEQGSLFTFGKGRE 243
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G + S PK V + V+ I A G Y T +S +G +Y +G E LG
Sbjct: 244 CQLGLGGDRDISEPKRVPVIPPVEEI--ACGGYHTGAISRNGQLYMWGSNEYGCLG 297
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG---WG 286
G G G+LG S P + + Q +LQP+ +A G H V+ ++GRV G WG
Sbjct: 15 GNGDYGRLGQASGESFWEPTVCKSMQ--HLQPIALACGGAHTLVLTEEGRVYASGLNDWG 72
Query: 287 RYG---CLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+ G GH E E E +P ++ K H+A GD+ + +SEDG VY +G
Sbjct: 73 QLGLPLSTGHSMEFLEVEGLP------DEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126
Query: 342 SLGHNAIADGQVCSLLFLSIFQYLQI 367
LG G+VC+ ++ + +I
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRI 152
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 175 WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
WGN RLG + + EP + +++++ + +A G + L L + VY+ G
Sbjct: 14 WGNGDYGRLGQASGESFWEP-TVCKSMQHLQPIALACGGAHTLVLTEEGR---VYASGLN 69
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG T L + + +AAG +H+A + +DGRV WG G LG
Sbjct: 70 DWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLG 129
Query: 293 HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G V + V++L D + +A G + +SE+G+V S+G + LGH +
Sbjct: 130 LGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGH---GE 186
Query: 351 GQVCSLLFLSIFQ 363
G S +F SIF+
Sbjct: 187 GHRSSSMF-SIFR 198
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G YG LG + E P V +++ ++ I +A G T V++E+G VY+ G +
Sbjct: 11 VALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLND 70
Query: 340 SASLG 344
LG
Sbjct: 71 WGQLG 75
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TMEKDRIIEIAA 315
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)
Query: 42 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
RR ++A+ G H++ + + G VYS G+N GQLG + + S IR
Sbjct: 80 RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 139
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ A G ++ +SDAGQV+++G + G+ G + + P++++ L + +VQ A G
Sbjct: 140 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 196
Query: 158 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
L+ G + FSWG +A LG + N+ P + L +P+ +A G +
Sbjct: 197 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPR-RVSHLVGVPLALVACGAMH 253
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+ L PSG V+ G G+LG + D HP +++ + ++ V G H A
Sbjct: 254 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 308
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 332
+ DG V T+G G YG LGHG + E+VP+ V L ++ G +T + G +
Sbjct: 309 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 368
Query: 333 YSFGCGESASLGHNAI 348
Y FG G S LG+ +
Sbjct: 369 YIFGLGMSGQLGNGTL 384
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ G V+S+G N +GQLG GT EE RP+ I+ L + I+Q A GA +
Sbjct: 143 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G+++++G ++ G+ G T P+ V L + + A G + L+ G
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 262
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG ++ +LG + + + P +L L + + + G + AL + V+
Sbjct: 263 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 316
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGHG + +E PR + +L+ ++ G H A Q GR+ +G G
Sbjct: 317 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 374
Query: 287 RYGCLGHGNEECESVPKVVQAL 308
G LG+G E ++P V L
Sbjct: 375 MSGQLGNGTLESSALPVTVPGL 396
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 18/292 (6%)
Query: 63 VVYSFGSNSSGQLG-----HGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
++YS+G +G+LG G E +P +R + + A G T+++ G
Sbjct: 46 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VY+ G + FG+ KL + V +L + A G + LS G+V+++
Sbjct: 106 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+ +LG TE ++ L + +VQIA G + LALA + ++S G G
Sbjct: 162 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 218
Query: 236 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
+LG G S +E+ PR + L+ + +VA GA H+ + G V WG G LG
Sbjct: 219 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 276
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ P V++ L + HV G+ T ++ DG V++FG G LGH
Sbjct: 277 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 328
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
Q G H +A+ + G ++S+G N+SGQLG G +T E PR + L G+ + A GA
Sbjct: 192 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 251
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++ +G V+ +G++S G+ Q +L P +++ L++ + G TA L
Sbjct: 252 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 309
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G V+TF G +LGH + N+ P ++ L + Q++ G C+ +A A P
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 366
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+Y G G+ G+LG+G+ P V G WH
Sbjct: 367 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 398
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 33/322 (10%)
Query: 58 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G + G L GT E PRP+ S + + Q G L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
++ G G G LGHG+R +P+ + Q LN L+ V VA WH A V+GQ
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPK---EVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSM 436
Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTM 496
Query: 336 GCGESASLGHNAIADGQVCSLL 357
G LG N+I+DG++ L+
Sbjct: 497 GGTAHGQLG-NSISDGKLPCLV 517
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 25/275 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ V++ G ++S+G ++ G LGHG+ W P+ + L+G++++ A G +
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 155
L + G+++ FG +FG +G + + V+ P+ V+SL + V+ A
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 428
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+G T++ SR +++T+ G+ RLGH + + P + +L + +IA G+ + +
Sbjct: 429 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 485
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL SG V+++G G+LG+ S +D K P L+ Q +L+ +A GA H AV+
Sbjct: 486 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 540
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V TWG G G LGHG+ E + P +V+AL D
Sbjct: 541 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRD 575
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G + S ++++G +LGHG E P + SL + A G T+ ++
Sbjct: 430 GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT 489
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 171
+G V+ G + G+ + KL P LV+ L FV + A G AVL+ V+
Sbjct: 490 SGHVFTMGGTAHGQLGNSISDGKL---PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVF 546
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
T+ G + RLGH + P L+ L + V ++ G + ++
Sbjct: 547 TWGKGANGRLGHGDTEDKRTP-TLVEALRDRHVKSLSCGSNFTSSI 591
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 165/334 (49%), Gaps = 30/334 (8%)
Query: 34 LLAGEACCRRENSQA--IAGPGH-SIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRP 88
L+A A R E+ +A ++GP S+ +Y F G + + QLG G + + P+
Sbjct: 145 LVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKL 204
Query: 89 IRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+ +L G II + GA I G+++ +G G G++ K V P V+ L
Sbjct: 205 VSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGR--LGLKSGKDVPYPTRVDFL 262
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
K+ +V G + +A +S + +V+T+ G+ +LGH + ++ P + L +IP+VQ
Sbjct: 263 KDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSV-AALHHIPIVQ 321
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ------ 260
+A GY ++ AL+ VY+ G G G+LGHG P+ + LL L+
Sbjct: 322 VALGYEHMAALSLDGD---VYTWGEGEHGQLGHGDLNSCSTPKKL----LLELENTTGEV 374
Query: 261 -----PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKA 313
PV++A GA ++ GR+ ++G +G LG G + + P ++ + ++ +
Sbjct: 375 ADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRF 434
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+H++ GD V+ G+VY++G G ++G A
Sbjct: 435 VHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 13/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H A+ S G ++++G G+LG + ++ P + L+ I+ G + I
Sbjct: 221 GADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACI 280
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S +V+ +G S G+ + + + + P+ V +L +I +VQ A+G A LS +G V
Sbjct: 281 SHDMKVFTWGSGSKGQLGHVEKSDEWL--PRSVAALHHIPIVQVALGYEHMAALSLDGDV 338
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-----A 225
YT+ G +LGH + P LL LEN G LLA + +
Sbjct: 339 YTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGR 398
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+ S G G LG G + P LI + + V ++AG H A V G V TWG
Sbjct: 399 LISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQ 458
Query: 286 GRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G +G +G + N P ++ D +A + G T ++S+DG V G
Sbjct: 459 GCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 12/225 (5%)
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
T Q L+ I + + A+ + ++LS +G S L T P P L
Sbjct: 80 TPNQAPRFLEQISISEGAVDSEAHSLLSPQGTSEENSKVEQGALDSSTAFFPTAPQPCLL 139
Query: 198 TLENIPVVQIAA---------GYCYLLALACQP---SGMAVYSVGCGLGGKLGHGSRTDE 245
E V +AA AL+ QP + +++ GC +LG G +
Sbjct: 140 DAEKQLVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQ 199
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
P+L+ L + V+ GA H A + G++ TWG +G LG + + P V
Sbjct: 200 PFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRV 259
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
L D + V G Y++ +S D V+++G G LGH +D
Sbjct: 260 DFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSD 304
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI--------RI 97
Q G H A++ G VY++G GQLGHG P+ + L+
Sbjct: 321 QVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSP 380
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAA 155
+ A GA T++++D G++ +FG FG G+ +L P L+ S + V +
Sbjct: 381 VLLACGASVTLILTDYGRLISFGMSEFG--ALGLGEKRLAARPHLITSRIMDKRRFVHLS 438
Query: 156 IGNFFTAVLSREGRVYTF------SWGNDARLGHHTEPNDVEPHPL 195
G+ A ++ +G VYT+ + G AR + P+ +P+ L
Sbjct: 439 AGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKL 484
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)
Query: 42 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
RR ++A+ G H++ + + G VYS G+N GQLG + + S IR
Sbjct: 86 RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 145
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ A G ++ +SDAGQV+++G + G+ G + + P++++ L + +VQ A G
Sbjct: 146 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 202
Query: 158 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
L+ G + FSWG +A LG + N+ P + L +P+ +A G +
Sbjct: 203 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPR-RVSHLVGVPLALVACGAMH 259
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+ L PSG V+ G G+LG + D HP +++ + ++ V G H A
Sbjct: 260 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 314
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 332
+ DG V T+G G YG LGHG + E+VP+ V L ++ G +T + G +
Sbjct: 315 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 374
Query: 333 YSFGCGESASLGHNAI 348
Y FG G S LG+ +
Sbjct: 375 YIFGLGMSGQLGNGTL 390
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A++ G V+S+G N +GQLG GT EE RP+ I+ L + I+Q A GA +
Sbjct: 149 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G+++++G ++ G+ G T P+ V L + + A G + L+ G
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 268
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG ++ +LG + + + P +L L + + + G + AL + V+
Sbjct: 269 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 322
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGHG + +E PR + +L+ ++ G H A Q GR+ +G G
Sbjct: 323 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 380
Query: 287 RYGCLGHGNEECESVPKVVQAL 308
G LG+G E ++P V L
Sbjct: 381 MSGQLGNGTLESSALPVTVPGL 402
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 18/292 (6%)
Query: 63 VVYSFGSNSSGQLG-----HGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
++YS+G +G+LG G E +P +R + + A G T+++ G
Sbjct: 52 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VY+ G + FG+ KL + V +L + A G + LS G+V+++
Sbjct: 112 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+ +LG TE ++ L + +VQIA G + LALA + ++S G G
Sbjct: 168 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 224
Query: 236 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
+LG G S +E+ PR + L+ + +VA GA H+ + G V WG G LG
Sbjct: 225 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 282
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++ P V++ L + HV G+ T ++ DG V++FG G LGH
Sbjct: 283 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 334
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 104
Q G H +A+ + G ++S+G N+SGQLG G +T E PR + L G+ + A GA
Sbjct: 198 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 257
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++ +G V+ +G++S G+ Q +L P +++ L++ + G TA L
Sbjct: 258 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 315
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G V+TF G +LGH + N+ P ++ L + Q++ G C+ +A A P
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 372
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+Y G G+ G+LG+G+ P V G WH
Sbjct: 373 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 404
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2543
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2544 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2601
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2658
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ I+ + ++ V A G + + +DG V T+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 2716
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776
Query: 344 G 344
G
Sbjct: 2777 G 2777
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2582 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2641
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 2642 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 2699
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 2700 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 2751
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 2752 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 2806
Query: 270 HAA 272
H+A
Sbjct: 2807 HSA 2809
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 2545 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 2604
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 2605 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 2662
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 2663 AFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 2718
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + +G V WG G L
Sbjct: 2719 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV--GAEHTLALASNGDVYAWGSNSEGQL 2776
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 2777 GLGHTNHVREPTLVTGLQGKNVRQISAG 2804
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 2462 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 2520
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 2521 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 2575
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 2576 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 2633
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 2634 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2673
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 2494 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 2553
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 2554 GEVFSWGDGDYGKLGH 2569
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 156/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
Length = 494
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 151/323 (46%), Gaps = 41/323 (12%)
Query: 46 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L ++ AA G
Sbjct: 123 SCVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 182
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ ++D G VY+FG++ G+ Q T V SP L+ S +V+ A G F+ V
Sbjct: 183 RNHTLALTDNGSVYSFGENKLGQLGQCSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 240
Query: 164 LSREGRVYTFSWGNDARLGHHTEPN------------DVEPHPLLGTLE----------- 200
+ +G +Y+F +LGH+++ ++ P + +E
Sbjct: 241 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 300
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
N+ V +A G + L L Q V+S G G G+LGH + DE PRLI+ F
Sbjct: 301 NVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRG 357
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+ G + V ++G + WG + + + E PK VQ L K +A G
Sbjct: 358 ASQIYTGYQCSFAVTENGSLSFWG------VTNTSRESTMYPKAVQDLGGWKIRSLACGK 411
Query: 321 YTTFVVSEDGDVYSFG----CGE 339
++ +++ D S+G CGE
Sbjct: 412 -SSIILAADESTISWGPSPTCGE 433
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRLEAPKLI 168
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E L + V A G H + +G V ++G + G LG ++ + + + +
Sbjct: 169 EG--LADHLVVAAACGRNHTLALTDNGSVYSFGENKLGQLGQCSQTYAVLSPALISYDGQ 226
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ VA G + VV G++YSFGC E LGHN+
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNS 262
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 117/287 (40%), Gaps = 52/287 (18%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
GR + G++ +G YG VQ + +V+ P SL
Sbjct: 90 GRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL-------------- 135
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+++ EG+++++ +LGH + +E L+ L + VV A G + LAL
Sbjct: 136 --LITTEGKLWSWGRNEKGQLGH-GDTKRLEAPKLIEGLADHLVVAAACGRNHTLALT-- 190
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
+VYS G G+LG S+T + L + QP+V VA GA + VV G
Sbjct: 191 -DNGSVYSFGENKLGQLGQCSQT---YAVLSPALISYDGQPLVKVACGAEFSMVVDCKGN 246
Query: 280 VCTWGWGRYGCLGHGNE------------ECESVPKV------------VQALNDVKAIH 315
+ ++G YG LGH ++ +CE +P+ V + +V
Sbjct: 247 LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVVRD 306
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 307 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLIKLFDF 353
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 156/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 201
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 262 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+A G T ++ G V++ G + LG N +DG+
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK 517
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A +
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++YT+ G+ RLGH + + P + LE Q+A G+ +AL
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTVAL 492
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A SG V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 493 AT--SGR-VFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLTSR 547
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
D VCT + R+ C G C S KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVL 164
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 165 SREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-- 217
+ G++YTF G LGH P +VE L +++A G + A+
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVE------ALSGFKTIKVACGIWHSAAIVE 432
Query: 218 ACQPSGMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 270
+G V Y+ G G +LGHG +K PRL+ + LL +A G
Sbjct: 433 VTNQTGANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNM 488
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ GRV T G G LG+ + + V L ++ G V++
Sbjct: 489 TVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRS 548
Query: 331 DVYSFGCGESASLGHNAIAD 350
+VY++G G + LGH + D
Sbjct: 549 EVYTWGMGANGRLGHGDLKD 568
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLTVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 84 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 LEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+ +L N + A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 321 YTTFVVSEDGDVYSFG 336
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G +LG+GS P + L+N + + VA G+ H+ V+ DG V WG+
Sbjct: 95 VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P KV L + I +A G ++ V ++G+VY++G + LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR I+ + + +G H +V DG V +WG
Sbjct: 42 VFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGH 100
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G+ P +V L + KAI VA G + + V++ DG+VY++G S +G
Sbjct: 101 NAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVG 160
Query: 345 HNAIAD 350
+ A+
Sbjct: 161 SGSTAN 166
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 156/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L I+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 335
G + E + + ++ A + DV+ H+ G Y FV + + F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 163/351 (46%), Gaps = 32/351 (9%)
Query: 9 KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSIAVTSK 61
KP+ +A LK G W + + C E Q+I + + T
Sbjct: 14 KPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQSIRQACVFGSAGNEVLYTTVD 64
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
++ G+N SG LG G + PR + SL G +I + G+G +L + G+V+ +G
Sbjct: 65 DEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N +
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
+G + N P + G L+N V+ IA G + ++A +G VY G G+LG G
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLG 240
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 241 SSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298
Query: 301 VPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
P V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 299 YPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR + + + +G H + DG V TWG
Sbjct: 67 IFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 33/322 (10%)
Query: 58 VTSKGVVYSFG---SNSSGQLGHGT----TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G +++ G+GT T + P+P+ S + + Q A+G L+
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G++S G +G+ K PQLVE L V A G T +S +
Sbjct: 280 TRQGEVFTWGEESGGRLGHGID--KDFGRPQLVEFLAVTNVESVACGENHTCAVSISDEL 337
Query: 171 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
FSWG N LGH T+ + P + G LE + V+ IA G + ALA S +
Sbjct: 338 --FSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACG-TWHSALAT--SNGKL 392
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
++ G G G LGHG+R +P+ + QLL+ L+ + VA G WH A V Q G
Sbjct: 393 FTFGDGTFGVLGHGNRESVAYPK---EVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNV 449
Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++ TWG G LGHGN+E P V L + +A G T ++ G +++
Sbjct: 450 SSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTM 509
Query: 336 GCGESASLGHNAIADGQVCSLL 357
G E LG N+++DG++ L+
Sbjct: 510 GGTEFGQLG-NSLSDGKIPILV 530
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 22/293 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N +++A G H+ AV+ ++S+G + G LGHGT W P+ I L+G+++I
Sbjct: 317 NVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISI 376
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G + L + G+++ FG +FG +G + + V P+ V+ L + + A G +
Sbjct: 377 ACGTWHSALATSNGKLFTFGDGTFGVLGHGNRES--VAYPKEVQLLSGLKTITVACGVWH 434
Query: 161 TAVLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
TA + +++T+ G+ RLGH + ++P + TL QIA G
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPT-CVSTLIEYNFHQIACG 493
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ +AL SG ++++G G+LG+ S +D K P L+ Q L+ ++ GA H
Sbjct: 494 HTMTIALTT--SGH-LFTMGGTEFGQLGN-SLSDGKIPILV-QDALVGEFVEEISCGAHH 548
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
A + + TWG G G LGHG+ + P +V+AL + +++ G T
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFT 601
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 17/322 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q +G H VT +G V+++G S G+LGHG ++ RP+ + L + A G
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENH 327
Query: 107 TMLISDAGQVYAF--GKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
T +S + +++++ GK + G +G + V P+ + L+ + V+ A G + +A+
Sbjct: 328 TCAVSISDELFSWGDGKYNVGLLGHGTDVSHWV--PKRINGPLEGLQVISIACGTWHSAL 385
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA----- 218
+ G+++TF G LGH + P + L + + +A G + A+
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGNRESVAYPKE-VQLLSGLKTITVACGVWHTAAIVEVTFQ 444
Query: 219 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
S +++ G G +LGHG++ P + N +A G +
Sbjct: 445 SGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIALTT 502
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G + T G +G LG+ + + +P +VQ AL ++ G + ++ ++Y++
Sbjct: 503 SGHLFTMGGTEFGQLGNSLSDGK-IPILVQDALVGEFVEEISCGAHHVAALTSRSELYTW 561
Query: 336 GCGESASLGHNAIADGQVCSLL 357
G G + LGH I D + +L+
Sbjct: 562 GKGANGRLGHGDIDDRKSPTLV 583
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G +IA+T+ G +++ G GQLG+ ++ + +L G + + + GA
Sbjct: 489 QIACGHTMTIALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHH 548
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++Y +GK + G +G + SP LVE+LK V + G+ FT+ +
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDR--KSPTLVEALKERHVKNISCGSSFTSCI 604
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 245
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 246 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 303
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQVACGLNHTLAVSA--DG 360
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 418
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478
Query: 344 G 344
G
Sbjct: 479 G 479
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 284 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 343
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 344 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 401
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + L + + +A
Sbjct: 402 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 453
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 454 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 508
Query: 270 HAA 272
H+A
Sbjct: 509 HSA 511
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 247 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 306
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 307 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 364
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 365 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 420
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ VA GA H + G V WG G L
Sbjct: 421 DRLIGLPEGRARNHNRPQQIPVLAGVVIED--VAVGAEHTLALASTGDVYAWGSNSEGQL 478
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 479 GLGHTNHVREPTLVTVLQGKNIRQISAG 506
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 164 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 222
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 223 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 277
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 278 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 335
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 336 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 375
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 196 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 255
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 256 GEVFSWGDGDYGKLGH 271
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+A G H++ +T G VYS GSN GQLGH + RP+ + L II A G
Sbjct: 38 KAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEMH 95
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +S G+V+++G D++G+ + + GT L P+L++SL VVQ A G + L+
Sbjct: 96 SLALSRWGEVFSWGSDNYGQLGHQLGGT-LQIVPKLIKSLAKYQVVQIAAGQRHSVALTN 154
Query: 167 EGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G ++ + + +LG T P + P + +L IP IA G + A++ SG A
Sbjct: 155 AGEIFVWGANDFGQLGLGTITPYESTPTTVC-SLSGIPFALIACGANHTFAVS--KSG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G + G+LG +K P + L N + ++ G + + DG V + G
Sbjct: 211 VFGWGKNINGQLGLNDTVSKKFPTQLR--TLRNSRVRFISCGDEFSTFLTLDGGVFSCGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 335
G YG LGHG E +P+ V L ++ G ++ V G VYS+
Sbjct: 269 GMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 20/309 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
++ +GS G+LG G EEE + P+ + + +++AA GA T+ ++ G+VY+ G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 179
+ +G+ + + PQLV L ++ A G + LSR G V FSWG+D
Sbjct: 61 NDYGQLGHDQPRKR----PQLVSGLDAYSIINVACGEMHSLALSRWGEV--FSWGSDNYG 114
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH L+ +L VVQIAAG + +AL + ++ G G+LG
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT---NAGEIFVWGANDFGQLGL 171
Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
G+ T E P + L + ++A GA H V + G V WG G LG +
Sbjct: 172 GTITPYESTPTTV--CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS 229
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVC 354
+ P ++ L + + ++ GD + ++ DG V+S G G LGH N I QV
Sbjct: 230 KKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVL 289
Query: 355 SLLFLSIFQ 363
L+ +I Q
Sbjct: 290 ELMGSTITQ 298
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGH---GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
G HS+A++ G V+S+GS++ GQLGH GT + P+ I+SL +++Q AAG +
Sbjct: 92 GEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQ--IVPKLIKSLAKYQVVQIAAGQRHS 149
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +++AG+++ +G + FG+ G T ++P V SL I A G T +S+
Sbjct: 150 VALTNAGEIFVWGANDFGQLGLGTI-TPYESTPTTVCSLSGIPFALIACGANHTFAVSKS 208
Query: 168 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V F WG + +LG + + P L TL N V I+ G + L
Sbjct: 209 GAV--FGWGKNINGQLGLNDTVSKKFPTQL-RTLRNSRVRFISCGDEFSTFLTLDG---G 262
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V+S G G+ G+LGHG ++E PR + +L+ ++ G H+ A V GRV ++G
Sbjct: 263 VFSCGAGMYGQLGHGGTSNEILPRQV--LELMGSTITQISCGRQHSLAFVPSRGRVYSYG 320
Query: 285 WGRYGCLGHGNEECESVPKVV 305
G G LG S P+VV
Sbjct: 321 LGGAGQLGLRKPSNASTPQVV 341
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 9/211 (4%)
Query: 19 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
L + GG+ ++V + + ++ + + Q AG HS+A+T+ G ++ +G+N GQLG G
Sbjct: 116 LGHQLGGTLQIVPKLI---KSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Query: 79 T-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
T T E P + SL GI A GA T +S +G V+ +GK+ G+ G+ T
Sbjct: 173 TITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQL--GLNDTVSK 230
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
P + +L+N V + G+ F+ L+ +G V++ G +LGH N++ P +L
Sbjct: 231 KFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLE 290
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+ + + QI+ G + LA PS VYS
Sbjct: 291 LMGST-ITQISCGRQHSLAFV--PSRGRVYS 318
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 230 GCGLGGKLGHGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
G + G+LG G +E+H P+ ++ F+ ++ + A GA H + +DG+V + G
Sbjct: 5 GSTIHGELGLGG-IEEEHVFTPKALDWFEAKSV--MKAALGANHTLFLTKDGKVYSCGSN 61
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
YG LGH ++ P++V L+ I+VA G+ + +S G+V+S+G LGH
Sbjct: 62 DYGQLGH--DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQ 119
Query: 347 AIADGQVCSLLFLSIFQY 364
Q+ L S+ +Y
Sbjct: 120 LGGTLQIVPKLIKSLAKY 137
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ AV+ G V+ +G N +GQLG T + P +R+L+ R+ + G + +
Sbjct: 198 GANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFL 257
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 169
+ G V++ G +G+ +G GT P+ V L + Q + G + A + GR
Sbjct: 258 TLDGGVFSCGAGMYGQLGHG--GTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGR 315
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLG---TLENIPVV 205
VY++ G +LG N P +LG + +PVV
Sbjct: 316 VYSYGLGGAGQLGLRKPSNASTPQVVLGPWVSPSGVPVV 354
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 107 bits (268), Expect = 6e-21, Method: Composition-based stats.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 14/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G ++ FGSN+ GQLG GT +P +++L+ R+ A G T++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
+ G +YA G ++ E + G+ TS LVE K + A G+ +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + ++ ++G E N + P + +G V ++ GY + + A+Y+
Sbjct: 162 LYMWGDNSEGQIGLGKESNALTPQEVSVGK----RVFWVSCGYYHSAFVTVDG---ALYT 214
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLG + H ++ +Q + + V VA G H + ++ V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272
Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG ES +P+VV+ + H A G+ T +++++G +Y+FG G LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 32/258 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW---------RPRPIRSLQGIRIIQAA 101
G H++ TS+G +Y+ G N+ GQLG G + + PI+ L A
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML--------A 147
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG+ + ++ G++Y +G +S G+ G + L +PQ V K +F V + G + +
Sbjct: 148 AGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHS 203
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALAC 219
A ++ +G +YTF + +LG TE + H + + +IP VVQ+A G + +AL
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVAL-- 259
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ VYS G G G+LGHG+ E PR++E F+ ++ A G H A++ +G
Sbjct: 260 --TENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDNG 315
Query: 279 RVCTWGWGRYGCLGHGNE 296
+ T+G GR+G LG G E
Sbjct: 316 LLYTFGDGRHGKLGLGEE 333
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 23/290 (7%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ G V++FG + + + W L+ ++ + G T L+++ G+++
Sbjct: 9 IPESGAVFTFGKS---KFADNAPSKFW-------LKNDVPLRISCGDEHTALVTENGKLF 58
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
FG +++G+ G + T V P V++LK+ V A G T V + G +Y N
Sbjct: 59 MFGSNNWGQLGLGTKTT--VNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+ +LG + H + + P+ +AAG AL +Y G G++
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT---QDGRLYMWGDNSEGQI 173
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G ++ P+ + + + V+ G +H+A V DG + T+G G LG E+
Sbjct: 174 GLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEK 229
Query: 298 CESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ KV Q + D+ + + VA G T ++E+ +VYSFG G+ LGH
Sbjct: 230 LAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGH 277
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S A+T G +Y +G NS GQ+G G P+ + G R+ + G +
Sbjct: 148 AGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ G +Y FG+ G + G+ KL PQ V + + VVQ A G T L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT-E 261
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY+F G +LGH T + L +E+ ++ C A +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318
Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+ G G GKLG G T++ P L +F L+ V G H V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G GH++A+T + VYSFG GQLGHGT E R PR + + R+ AA G
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G + P L + V G VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Query: 166 R 166
+
Sbjct: 367 K 367
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 175/348 (50%), Gaps = 47/348 (13%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+++G+N GQLG+G +E+ + P +++L+ ++ AAG ++
Sbjct: 254 AGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLA 311
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G ++A+G + +G+ G ++ + P +SLK++ + A G + L ++G
Sbjct: 312 LKKDGTIWAWGDNEWGQ--LGNSISEKLCVPVQFKSLKDVVAIAA--GCEHSLALKKDGT 367
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ SWGN+ +LG+ + P + G + VV IA G + LAL + V+
Sbjct: 368 VW--SWGNNYYGQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGT---VW 419
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG+G+ P Q+ L+ VV +AAG+ H+ +DG V WG
Sbjct: 420 AWGNNEFGQLGNGTNKSSFVP-----VQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNN 474
Query: 287 RYGCLGHGNE---ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
+G LG+G+ + +VP V+ L DV + VA G + + +DG ++++G L
Sbjct: 475 EFGQLGNGSGGYGQYYAVPVQVKGLKDV--VAVAAGSVHSLALKKDGTIWAWGSNYHGLL 532
Query: 344 GHN-----------------AIADGQVCSLLFL---SIFQYLQIWLNL 371
G++ AIA G SL+ +++ + ++W +L
Sbjct: 533 GNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDL 580
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 74/355 (20%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS+A+ G V+++G+N GQLG+GT + + P ++ L+ ++ AAG+
Sbjct: 401 AIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDH 458
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ G V+A+G + FG+ G G + P V+ LK++ V A G+ + L
Sbjct: 459 SLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAA--GSVHSLALK 516
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVE---------------------PHPLL----GTL- 199
++G ++ +WG++ H ND+E H L+ GT+
Sbjct: 517 KDGTIW--AWGSNY---HGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVW 571
Query: 200 -----------EN-------IPV--------VQIAAGYCYLLALACQPSGMAVYSVGCGL 233
EN +PV V IAAG + L L + V++ G
Sbjct: 572 AWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGT---VWAWGDNF 628
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG+ R EK+ + Q + L + +A G WH+ + +DG V WG G LG+
Sbjct: 629 FGQLGNSPR--EKYSLVPVQVKGLK-DILAIATGEWHSLAIKKDGTVWAWGENSTGQLGN 685
Query: 294 ---GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G ++ VP V+ + DV AI + G Y + + +DG V+ +G LG+
Sbjct: 686 ETSGKDKYSYVPVQVKGIKDVLAI--SAGSYHSLALKKDGTVWGWGANARGQLGN 738
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 26/301 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG G+S+ + G V+ +G N S Q+ G+ ++ P I+ L+ ++ AAG ++
Sbjct: 152 AGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLK--DVVAIAAGKDYSLA 209
Query: 110 ISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G V+ + + + + G V P VE LK++ + A G + + L ++
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQVEGLKDVVAIAA--GRYHSLALKKD 265
Query: 168 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V+ +WGN+ +LG+ + +P + + VV IAAG + LAL +
Sbjct: 266 GTVW--AWGNNYYGQLGNGKSEDSYDPVQVKNLKD---VVAIAAGENHSLALKKDGT--- 317
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
+++ G G+LG + +L Q +L+ VV +AAG H+ + +DG V +WG
Sbjct: 318 IWAWGDNEWGQLG-----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWG 372
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG+GN VP V+ L DV AI ATG+ + + +DG V+++G E LG
Sbjct: 373 NNYYGQLGNGNSIDSYVPVQVRGLKDVVAI--ATGNAHSLALKKDGTVWAWGNNEFGQLG 430
Query: 345 H 345
+
Sbjct: 431 N 431
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 23/308 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
AG HS+ + G V+++GSN GQLG+ E+ P++ ++G++ ++ AAG G ++
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGN-RDAGEYSIVPVQ-VKGLKDVVAIAAGDGYSL 158
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G V+ +G E+ + G+ K + P ++ LK++ + A G ++ L ++
Sbjct: 159 GLKKDGTVWCWG---LNESIQVIDGSNKDFSVPFQIKGLKDVVAIAA--GKDYSLALKKD 213
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 226
G V+ + + + ++ P P+ +E + VV IAAG + LAL + V
Sbjct: 214 GTVWMWEYKYNYYEQLRRGADEYSPVPV--QVEGLKDVVAIAAGRYHSLALKKDGT---V 268
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG+G D P Q+ NL+ VV +AAG H+ + +DG + WG
Sbjct: 269 WAWGNNYYGQLGNGKSEDSYDP-----VQVKNLKDVVAIAAGENHSLALKKDGTIWAWGD 323
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG+ E VP ++L DV AI A G + + +DG V+S+G LG+
Sbjct: 324 NEWGQLGNSISEKLCVPVQFKSLKDVVAI--AAGCEHSLALKKDGTVWSWGNNYYGQLGN 381
Query: 346 NAIADGQV 353
D V
Sbjct: 382 GNSIDSYV 389
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 152/304 (50%), Gaps = 29/304 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+S+G+N GQLG+G + + + P +R L+ ++ A G ++
Sbjct: 354 AGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK--DVVAIATGNAHSLA 411
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + FG+ G + V P V+ LK++ + A G+ + ++G
Sbjct: 412 LKKDGTVWAWGNNEFGQLGNGTNKSSFV--PVQVKGLKDVVAIAA--GSDHSLAFKKDGT 467
Query: 170 VYTFSWGND--ARLGHHTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
V+ +WGN+ +LG+ + P + G + VV +AAG + LAL +
Sbjct: 468 VW--AWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD---VVAVAAGSVHSLALKKDGT-- 520
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
+++ G G LG+ R Q+ L+ VV +AAG+ H+ V+ +DG V W
Sbjct: 521 -IWAWGSNYHGLLGNDIE------RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAW 573
Query: 284 GWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G + L + SVP ++ L DV AI A G++ + + +DG V+++G
Sbjct: 574 GEVWFDLLNENSRLVYSSVPVQIKGLKDVVAI--AAGEHHSLGLKKDGTVWAWGDNFFGQ 631
Query: 343 LGHN 346
LG++
Sbjct: 632 LGNS 635
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 28/309 (9%)
Query: 50 AGPGHSIAVTSKGVVY--SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGR 106
AG +S+A+ G V+ + N QL G +E+ P P++ ++G++ ++ AAG
Sbjct: 202 AGKDYSLALKKDGTVWMWEYKYNYYEQLRRGA--DEYSPVPVQ-VEGLKDVVAIAAGRYH 258
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G V+A+G + +G+ G ++ P V++LK++ + A G + L +
Sbjct: 259 SLALKKDGTVWAWGNNYYGQLGNG--KSEDSYDPVQVKNLKDVVAIAA--GENHSLALKK 314
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G ++ +WG++ +LG+ P + VV IAAG + LAL +
Sbjct: 315 DGTIW--AWGDNEWGQLGNSISEKLCVPVQFKSLKD---VVAIAAGCEHSLALKKDGT-- 367
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 283
V+S G G+LG+G+ D P Q+ L+ VV +A G H+ + +DG V W
Sbjct: 368 -VWSWGNNYYGQLGNGNSIDSYVP-----VQVRGLKDVVAIATGNAHSLALKKDGTVWAW 421
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G +G LG+G + VP V+ L DV AI A G + +DG V+++G E L
Sbjct: 422 GNNEFGQLGNGTNKSSFVPVQVKGLKDVVAI--AAGSDHSLAFKKDGTVWAWGNNEFGQL 479
Query: 344 GHNAIADGQ 352
G+ + GQ
Sbjct: 480 GNGSGGYGQ 488
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 23/259 (8%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
IIQ AAG ++ + G V+A+G + +G+ G + + ++ P V+ LK++ + A
Sbjct: 47 NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQC--GTEESSII--PVKVKGLKDVVAIAA- 101
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYL 214
G + + L ++G V+ + D +LG+ + P + G + VV IAAG Y
Sbjct: 102 -GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKD---VVAIAAGDGYS 157
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
L L + V+ G ++ GS D P FQ+ L+ VV +AAG ++
Sbjct: 158 LGLKKDGT---VWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLA 209
Query: 274 VGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ +DG V W + Y L G +E VP V+ L DV AI A G Y + + +DG
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAI--AAGRYHSLALKKDGT 267
Query: 332 VYSFGCGESASLGHNAIAD 350
V+++G LG+ D
Sbjct: 268 VWAWGNNYYGQLGNGKSED 286
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 130/250 (52%), Gaps = 22/250 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G ++++GSN G LG+ E + P ++ L+ ++ AAG+ +++
Sbjct: 507 AGSVHSLALKKDGTIWAWGSNYHGLLGN-DIERSFVPVQVKGLK--DVVAIAAGSNHSLV 563
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G V+A+G+ F + ++LV S P ++ LK++ + A G + L ++
Sbjct: 564 LKKDGTVWAWGEVWFDLLN---ENSRLVYSSVPVQIKGLKDVVAIAA--GEHHSLGLKKD 618
Query: 168 GRVYTFSWGND--ARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G V+ +WG++ +LG+ E + P + G + ++ IA G + LA+ +
Sbjct: 619 GTVW--AWGDNFFGQLGNSPREKYSLVPVQVKGLKD---ILAIATGEWHSLAIKKDGT-- 671
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG+ + +K+ + Q + + + ++AG++H+ + +DG V WG
Sbjct: 672 -VWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK-DVLAISAGSYHSLALKKDGTVWGWG 729
Query: 285 WGRYGCLGHG 294
G LG+G
Sbjct: 730 ANARGQLGNG 739
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIR-IIQAAAGA 104
AIA G HS+A+ G V+++G NS+GQLG+ T+ ++++ P++ ++GI+ ++ +AG+
Sbjct: 655 AIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQ-VKGIKDVLAISAGS 713
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
++ + G V+ +G ++ G+ G G Q++
Sbjct: 714 YHSLALKKDGTVWGWGANARGQLGNGGAGVYSTVPVQVI 752
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 10/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T ++ G+N SG LG G + PR + SL G +I + G+G +L + G+V+
Sbjct: 62 TVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVF 121
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G LV Q+ +L N V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G N P + G L+N VV IA G + ++A +G VY G G+L
Sbjct: 181 SGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQL 237
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+
Sbjct: 238 GLGSGGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 296 NQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G+ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE I + A +A ++ G VY
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSTHTSAAKTQGGHVYM-- 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGP-HVVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP ++ L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
A+
Sbjct: 186 SGPTAN 191
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTM 108
G H++ +T +G VY++G+NS GQLG G + P P+ ++ RII+ AA +
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHTSA 323
Query: 109 LISDAGQVYAFGK 121
+ G VY +G+
Sbjct: 324 AKTQGGHVYMWGQ 336
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1701
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 1702 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1759
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQVACGLNHTLAVSA--DG 1816
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 1874
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934
Query: 344 G 344
G
Sbjct: 1935 G 1935
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 1740 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1799
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 1800 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 1857
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + L + + +A
Sbjct: 1858 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 1909
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 1910 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRC 1964
Query: 270 HAA 272
H+A
Sbjct: 1965 HSA 1967
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 1703 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 1762
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 1763 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 1820
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 1821 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 1876
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 1877 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 1934
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 1935 GLGHTNHVREPTLVTVLQGKNVRQISAG 1962
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 1620 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 1678
Query: 191 EPHPLLGTLENIPVVQI-----AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ + G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 1679 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 1733
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 1734 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 1791
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 1792 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1831
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 1652 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 1711
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 1712 GEVFSWGDGDYGKLGH 1727
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 13/307 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 62 EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
A T+ I++ GQ++++G ++ E + G+ + +SP++V++L VVQ A G
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ G +Y++ ++ +LG T+ +++P + IP+ IA G + ++A
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDTKYEIKPK-FISAFIGIPIAFIACGGYH--SIAISK 234
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
SG AV+ G G+LG D P ++ Q N + A G + + DG V
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 341 ASLGHNA 347
LG+++
Sbjct: 352 GQLGNHS 358
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 27/320 (8%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 105
A+ P H K ++ +GS G+LG G E+E PR + + I Q A G
Sbjct: 17 AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T++I+ G++Y+ G + +G+ + +L QL+ L +AA G + T ++
Sbjct: 72 YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 222
G++ FSWG++ +LG +++ N +E P ++ TL VVQIA G + AL +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181
Query: 223 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+YS G G+LG G+ T E P+ I F + + +A G +H+ + + G V
Sbjct: 182 NGELYSWGSNSEGQLGLGTDTKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG +G LG + + ++P +Q L + K + A G+ + ++ DG V++ G G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299
Query: 342 SLGH----NAIADGQVCSLL 357
LGH N I QV L+
Sbjct: 300 QLGHGSNSNEILPRQVMELM 319
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H+ A+T+ G +YS+GSNS GQLG GT T+ E +P+ I + GI I A G
Sbjct: 168 QIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGY 227
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ IS +G V+ +GK++FG+ G+ T+ P +++L+N + AA G F+ L+
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQL--GLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLT 285
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P ++ L V QI+ G + LAL PS
Sbjct: 286 VDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 342
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ S P+++
Sbjct: 343 VYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 19/268 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
+A G H++A+ G ++S+GSN+ GQLG + E PR +++L ++Q A G
Sbjct: 114 KKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGM 173
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G++Y++G +S G+ G TK P+ + + I + A G + + +
Sbjct: 174 KHAFALTNNGELYSWGSNSEGQLGLGTD-TKYEIKPKFISAFIGIPIAFIACGGYHSIAI 232
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALAC 219
S+ G V F WG + +LG ND + L L TL+N + A G + + L
Sbjct: 233 SKSGAV--FGWGKNTFGQLG----LNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDG 278
V++ G G+ G+LGHGS ++E PR + +L+ ++ G H A+V G
Sbjct: 287 DG---GVFTCGAGMYGQLGHGSNSNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRG 341
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
RV WG G G LG+ + + P+VV
Sbjct: 342 RVYAWGLGGAGQLGNHSTRSVTTPQVVH 369
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HSIA++ G V+ +G N+ GQLG T++ P +++LQ +I AA G ++ ++
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T A++ GRVY
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 345
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG+H+ + P + G
Sbjct: 346 WGLGGAGQLGNHSTRSVTTPQVVHG 370
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N SG LG G + PR + SL +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHN 102
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+ + G LV Q+ +L N V++ A G++ + VL+ +G VY + + N ++G
Sbjct: 103 GYTQLGNGTTNHGLVPC-QVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVG 161
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQAIPRRVTGCLQNKVVVNIACG--QMCSVAVVDTG-EVYVWGYNGNGQLGLGSS 218
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 303 K-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
VV + + I +T+ ++ G VY +G C G+S L H
Sbjct: 277 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 127/244 (52%), Gaps = 18/244 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H I T++G V+++G N QLG+GTT P + + L ++I+ A G+ ++
Sbjct: 83 SGP-HIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSL 141
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VYA+G ++ G+ G + + P+ V L+N VV A G + +
Sbjct: 142 VLTSDGEVYAWGYNNSGQVGSGSTANQAI--PRRVTGCLQNKVVVNIACGQMCSVAVVDT 199
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A G+ + L L + V
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQ---V 254
Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTW 283
Y+ G G+LG G+++++ +P ++E+ +++ + A + H +A Q G V W
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE----IAACHSTHTSAAKTQGGHVYMW 310
Query: 284 GWGR 287
G R
Sbjct: 311 GQCR 314
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G VY++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNI 186
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G ++ + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 187 ACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGFAH 244
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGP-HIILATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP +V L++ + I VA G Y + V++ DG+VY++G S +G
Sbjct: 102 NGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2736
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2737 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2794
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2851
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 2909
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969
Query: 344 G 344
G
Sbjct: 2970 G 2970
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2775 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2834
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 2835 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 2892
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 2893 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 2944
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 2945 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 2999
Query: 270 HAA 272
H+A
Sbjct: 3000 HSA 3002
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 2738 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 2797
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 2798 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVW 2855
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 2856 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 2911
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 2912 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 2969
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 2970 GLGHTNHVREPTLVTVLQGKNIRQISAG 2997
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVV----------QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V Q G T V+ G V G+ RLG +D+
Sbjct: 2655 QLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 2713
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 2714 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 2768
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 2769 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 2826
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 2827 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2866
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 2687 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 2746
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 2747 GEVFSWGDGDYGKLGH 2762
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 76 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEG 135
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 136 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 194
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + ++A +G VY G
Sbjct: 195 YNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQ--MCSMAVVDTG-EVYVWGYNGN 251
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 252 GQLGLGSGGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 309
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 310 NKSNQSYPTPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 363
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 168 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNI 227
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 228 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ--PTPCRIAALQGIRVQRVACGYAH 285
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 286 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVI--VEKDRIIEIAA 332
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G+ + P I +LQGIR+ + A G T++++D G
Sbjct: 234 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 293
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE I + A +A ++ G VY
Sbjct: 294 QVYAWGANSYGQLGTGNKSNQSYPTPVIVEK-DRIIEIAACHSAHTSAAKTQGGHVYM-- 350
Query: 175 WG 176
WG
Sbjct: 351 WG 352
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 84 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HVVLATTEGEVFTWGH 142
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 143 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 202
Query: 345 HNAIAD 350
+ A+
Sbjct: 203 SGSTAN 208
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 84 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+ +L N + A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 321 YTTFVVSEDGDVYSFG 336
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 21/231 (9%)
Query: 45 NSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
N +AI+ G HS+ +T G VY++G N+SGQ+G G+T + PR + S LQ +I
Sbjct: 126 NKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGI 185
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VYA+G + G+ G G + +P + +L+ I V Q G
Sbjct: 186 ACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAH 243
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ EG +Y + + +LG + N + +P+ ++ +V+IAA + + A
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKS 301
Query: 221 PSGMAVYSVGCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 261
SG VY G G L H S TD+ P ++ ++LL+++P
Sbjct: 302 QSGQ-VYMWGQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
VYS G +LG+GS P + L+N + + VA G+ H+ V+ DG V WG+
Sbjct: 95 VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P KV L + I +A G ++ V ++G+VY++G + LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR I+ + + +G H +V DG V +WG
Sbjct: 42 VFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGH 100
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G+ P +V L + KAI VA G + + V++ DG+VY++G S +G
Sbjct: 101 NAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVG 160
Query: 345 HNAIAD 350
+ A+
Sbjct: 161 SGSTAN 166
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4190
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4248
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308
Query: 344 G 344
G
Sbjct: 4309 G 4309
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4283
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4284 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4338
Query: 270 HAA 272
H+A
Sbjct: 4339 HSA 4341
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4077 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4136
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4137 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSVVW 4194
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4250
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4308
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4309 GLGHTNHVREPTLVTVLQGKNIRQISAG 4336
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 3994 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4052
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4053 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4107
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4108 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4165
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4166 TALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4205
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4026 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4085
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4086 GEVFSWGDGDYGKLGH 4101
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA---G 103
Q + G + V G + + G S G+LG G +++ + PI +LQG +IQ A
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGS 581
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++ ++D+G+V+++G +G+ +G + P+ +E+L+ VV A G +AV
Sbjct: 582 DGHSLALTDSGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGEEVVNMACGFKHSAV 639
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLGH N P + LE + Q+A G + L L+ G
Sbjct: 640 VTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSA--DG 696
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG GS T + P+ I+ + + + G + V+ DGRV ++
Sbjct: 697 NTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKK--ICCGTQFSVVLTNDGRVFSF 754
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R G P+ +QAL V G ++ G+V+ +G L
Sbjct: 755 GQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQL 814
Query: 344 G 344
G
Sbjct: 815 G 815
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 13/270 (4%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +L+G ++ A G + +++
Sbjct: 583 GHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTV 642
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G +G K +P+ V +L+ + Q A G T VLS +G V+
Sbjct: 643 DGKLFTFGNGDYGRLGHGNSANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVW 700
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG + P + L I +I G + + L + V+S G
Sbjct: 701 AFGDGDYGKLGLGSCTAKTSPQA-IDVLAGIGCKKICCGTQFSVVLT---NDGRVFSFGQ 756
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY--G 289
G + P+ I+ + V V GA H + G V WGWG G
Sbjct: 757 ERLTGQPEGRLRGPQKPQQIQALASHFIDDVCV--GAEHVLALTSTGEV--WGWGNNVDG 812
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATG 319
LG G+ + P V+ L ++ G
Sbjct: 813 QLGLGHSNAQREPCVIPDLKGKNIRQISAG 842
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P + +SL + Q G T V+ G + G+ RLG + P+
Sbjct: 508 VNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPI- 564
Query: 197 GTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
L+ V+QIA +LA SG V+S G G GKLGHG+ ++ PR IE
Sbjct: 565 SALQGYVVIQIATSRGSDGHSLALTDSG-EVFSWGDGDYGKLGHGNSDRQRRPRQIEA-- 621
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
L + V +A G H+AVV DG++ T+G G YG LGHGN + P+ V AL
Sbjct: 622 LRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQ 681
Query: 316 VATGDYTTFVVSEDGD-VYSFGCGESASLG 344
VA G T V+S DG+ V++FG G+ LG
Sbjct: 682 VACGLNHTLVLSADGNTVWAFGDGDYGKLG 711
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-D 112
HS VT G +++FG+ G+LGHG + + P + +L+ I Q A G T+++S D
Sbjct: 636 HSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSAD 695
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
V+AFG +G+ G K TSPQ ++ L I + G F+ VL+ +GRV++
Sbjct: 696 GNTVWAFGDGDYGKLGLGSCTAK--TSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFS 753
Query: 173 F-----SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
F + + RL +P ++ L + + + G ++LAL S V+
Sbjct: 754 FGQERLTGQPEGRLRGPQKPQQIQ------ALASHFIDDVCVGAEHVLALT---STGEVW 804
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
G + G+LG G ++ P +I + N++ ++AG H+A
Sbjct: 805 GWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQ--ISAGRNHSA 847
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 229 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 285
+ CG G G+LG G+ D I Q + + + G+ H+ + G V +WG
Sbjct: 540 LACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGD 599
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G YG LGHGN + + P+ ++AL + +++A G + VV+ DG +++FG G+ LGH
Sbjct: 600 GDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659
Query: 346 NAIADGQV 353
A+ +
Sbjct: 660 GNSANKKT 667
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 11/288 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G + V+ VY +GSNSS QL GT E+ +P+ + + I+A G T +IS
Sbjct: 373 GEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQTIEA--GQYCTFVISS 430
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 171
G V A GK S+G G + E + I V ++ G + T + EG V+
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G+ +LGH P + G L+ VV ++AGY + A++ +Y+ G
Sbjct: 491 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 547
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 290
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 548 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 603
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG
Sbjct: 604 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 651
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 23/312 (7%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 101
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 414 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 473
Query: 102 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNF 159
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 474 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 531
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 532 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 587
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 588 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVC--AGSQSSLALTSTGQ 644
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-- 336
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 645 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNN 702
Query: 337 ----CGESASLG 344
CG+ S G
Sbjct: 703 SMGQCGQGNSTG 714
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 140/271 (51%), Gaps = 16/271 (5%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTMLIS 111
GH++A T++G V+S+G G+LGHG + + P+ I+ LQG ++ +AG + +S
Sbjct: 478 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 537
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-V 170
+ G++Y +G+ FG +G ++ + P LV+ + N+ V + G+ T LS++GR V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVGEV--SCGSSHTIALSKDGRTV 593
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
++F G++ +LG H + N V ++ L+ + + ++ AG LAL S VY+ G
Sbjct: 594 WSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT---STGQVYAWG 649
Query: 231 CGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
C G LG G S P+LIE +L + V ++ G H + D V WG G
Sbjct: 650 C--GACLGCGSSEATALRPKLIE--ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMG 705
Query: 290 CLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G GN + PK V L+ V ++ G
Sbjct: 706 QCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L + + ++A G + T V+
Sbjct: 373 GEAPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAATFADAQTIEA--GQYCTFVI 428
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH ++ + + + G+ L
Sbjct: 429 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----TL 481
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 482 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSED 539
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 540 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 597
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 598 GGDNGKLGH 606
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 579 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 638
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 639 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 692
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 693 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVVG-LDGVAIQQISAGTSHSLAWTALPR 748
Query: 223 GMAV 226
V
Sbjct: 749 DRQV 752
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4197
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGHVYTF 4255
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315
Query: 344 G 344
G
Sbjct: 4316 G 4316
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4181 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4238
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4290
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4291 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4345
Query: 270 HAA 272
H+A
Sbjct: 4346 HSA 4348
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 9/268 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 4084 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4143
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 171
G+++ FG +G G K + P+ V +L+ + Q A G T +S +G V+
Sbjct: 4144 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSVVW 4201
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F G+ +LG P + L I + ++A G + +AL VY+ G
Sbjct: 4202 AFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQ 4257
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
L G + P+ I + ++ V V GA H + G V WG G L
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQL 4315
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG 319
G G+ P +V L ++ G
Sbjct: 4316 GLGHTNHVREPTLVTVLQGKNIRQISAG 4343
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 141 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4001 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4059
Query: 191 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4060 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4114
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR IE Q + V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4115 RRPRQIEALQ--GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4172
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
AL + VA G T VS DG V++FG G+ LG
Sbjct: 4173 TALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4212
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4033 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4092
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4093 GEVFSWGDGDYGKLGH 4108
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
A G H++ V G + SFG N GQLG G T E P+P+R L GIR+ QA+
Sbjct: 322 HAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYH 381
Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+++ D G+VY FG++ FG+ G V KL P LVESL+ + A G + T V +
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGSGDVIDRKL---PCLVESLRGQRITTLACGQYHTVVST 438
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
E V + + +LG + + + + G L+ V + GY + + L +
Sbjct: 439 LEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEH--- 495
Query: 226 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+ G G+LG G T P +IE Q ++ ++AG +H ++ DG + +G
Sbjct: 496 VFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHV--YRISAGCYHTVLIDADGMLFVFG 553
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+G LG G+ P V + VA G Y T V++
Sbjct: 554 RNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 11/284 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V++ G NS G+LGH T ++ +G ++ AAG T+L+ G+VY G +
Sbjct: 233 VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYND 292
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G+ G V + ++ + V A G T V+ +G++ +F + +LG
Sbjct: 293 NGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQ 352
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
++ P P+ G L I V Q + Y Y +AC VY+ G G+LG G
Sbjct: 353 GNTSSEPVPKPVRG-LNGIRVTQASCSY-YHSVIACD--NGEVYTFGRNDFGQLGSGDVI 408
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
D K P L+E + + +A G +H V + V + G YG LG E ES K
Sbjct: 409 DRKLPCLVESLRGQRI--TTLACGQYHTVVSTLEIGVQSCGKNDYGQLGL--ESTESQRK 464
Query: 304 VVQA---LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
V L+ + HV G Y T V++ + V+ FG + LG
Sbjct: 465 FVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLG 508
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 10/305 (3%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--EWRPRPIRSLQGIRIIQA 100
RE AG H++ + S G VY+ G N +GQ G GTT+ PI + + A
Sbjct: 264 REVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHA 323
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
G T+++ D GQ+ +FG + G+ G ++ V P+ V L I V QA+ +
Sbjct: 324 YNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVTQASCSYYH 381
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ + G VYTF + +LG DV L +E++ +I C
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGS----GDVIDRKLPCLVESLRGQRITTLACGQYHTVVS 437
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ V S G G+LG S T+ + + + +L Q V G +H V+ + V
Sbjct: 438 TLEIGVQSCGKNDYGQLGLES-TESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHV 496
Query: 281 CTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+G YG LG G+ P +++ + ++ G Y T ++ DG ++ FG
Sbjct: 497 FGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNH 556
Query: 340 SASLG 344
LG
Sbjct: 557 HGQLG 561
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E V+T + LGH ++ + H L+ E VV +AAG + + L S V
Sbjct: 230 EREVWTCGQNSYGELGH-SDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLC---STGEV 285
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---------VVVAAGAWHAAVVGQD 277
Y+ G G+ G G+ ++ +L P V G H VV D
Sbjct: 286 YTAGYNDNGQCGQGT---------TQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDD 336
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ ++G+ G LG GN E VPK V+ LN ++ + Y + + ++G+VY+FG
Sbjct: 337 GQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396
Query: 338 GESASLGHNAIADGQVCSLL 357
+ LG + D ++ L+
Sbjct: 397 NDFGQLGSGDVIDRKLPCLV 416
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLTVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKR 277
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLTVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 13/307 (4%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 62 EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 162
A T+ I++ GQ++++G ++ E + G+ + +SP++V++L VVQ A G
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ G +Y++ ++ +LG T+ +++P + IP+ IA G + ++A
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDIKYEIKPK-FISAFIGIPIAFIACGGYH--SIAISK 234
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
SG AV+ G G+LG D P ++ Q N + A G + + DG V
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 341 ASLGHNA 347
LG+++
Sbjct: 352 GQLGNHS 358
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 27/320 (8%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 105
A+ P H K ++ +GS G+LG G E+E PR + + I Q A G
Sbjct: 17 AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T++I+ G++Y+ G + +G+ + +L QL+ L +AA G + T ++
Sbjct: 72 YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 222
G++ FSWG++ +LG +++ N +E P ++ TL VVQIA G + AL +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181
Query: 223 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+YS G G+LG G+ E P+ I F + + +A G +H+ + + G V
Sbjct: 182 NGELYSWGSNSEGQLGLGTDIKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG +G LG + + ++P +Q L + K + A G+ + ++ DG V++ G G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299
Query: 342 SLGH----NAIADGQVCSLL 357
LGH N I QV L+
Sbjct: 300 QLGHGSNSNEILPRQVMELM 319
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H+ A+T+ G +YS+GSNS GQLG GT + E +P+ I + GI I A G
Sbjct: 168 QIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGY 227
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ IS +G V+ +GK++FG+ G+ T+ P +++L+N + AA G F+ L+
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQL--GLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLT 285
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH + N++ P ++ L V QI+ G + LAL PS
Sbjct: 286 VDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 342
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ S P+++
Sbjct: 343 VYAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 19/268 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 104
+A G H++A+ G ++S+GSN+ GQLG + E PR +++L ++Q A G
Sbjct: 114 KKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGM 173
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G++Y++G +S G+ G K P+ + + I + A G + + +
Sbjct: 174 KHAFALTNNGELYSWGSNSEGQLGLGTD-IKYEIKPKFISAFIGIPIAFIACGGYHSIAI 232
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALAC 219
S+ G V F WG + +LG ND + L L TL+N + A G + + L
Sbjct: 233 SKSGAV--FGWGKNTFGQLG----LNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDG 278
V++ G G+ G+LGHGS ++E PR + +L+ ++ G H A+V G
Sbjct: 287 DG---GVFTCGAGMYGQLGHGSNSNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRG 341
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
RV WG G G LG+ + + P+VV
Sbjct: 342 RVYAWGLGGAGQLGNHSTRSVTTPQVVH 369
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HSIA++ G V+ +G N+ GQLG T++ P +++LQ +I AA G ++ ++
Sbjct: 228 HSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVD 287
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T A++ GRVY
Sbjct: 288 GGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 345
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG+H+ + P + G
Sbjct: 346 WGLGGAGQLGNHSTRSVTTPQVVHG 370
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 100
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3053
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3112 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3171 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3226
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3227 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3286
Query: 340 SASLGH 345
G+
Sbjct: 3287 HGQQGN 3292
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 147
L + I Q A R +++S G+VY A+ D+ G PQLV+ L +
Sbjct: 449 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLG--------------PQLVQGLASR 494
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
NI + A L+ G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 325 VVSEDGDVYSFGCGESASLGH 345
+++DG VYS+G G++ LGH
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH 692
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 170
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3069
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3125
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 288
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 12/260 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
P+ ++ L I++ AA + + ++ G+V+++G G +G T + P+++
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG--DTVPLEEPKMI 542
Query: 144 ESLKNI----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
+L VV A G+ ++A ++ EG +YT+ GN RLGH + + P + G L
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-L 601
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ + V+ ++ G LA +G V+S G G GKLG G K P+LIE+ Q L++
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + +DG+V +WG G LGHG EE PK+++ L K + VA G
Sbjct: 661 --VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAG 718
Query: 320 DYTTFVVSEDGDVYSFGCGE 339
++ED +V+S+G +
Sbjct: 719 STHCLALTEDSEVHSWGSND 738
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+VY++ G++ RLGH TE + P LL L+ VV +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLALT 726
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P E L N+ + Q A +LSR GRVY ++ +D LG L+
Sbjct: 440 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDT-LGPQ----------LV 488
Query: 197 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
L + +V+IAA G+ Y LALA + V+S GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 254 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 312 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGH 345
K I V+ +GD T V+E+G V+S+G G+ LG
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGR 640
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 168 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCLAVTDTGQVYA 3281
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 23/252 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 109
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G +LGHG+ ++P+L+E Q + V VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 288 YGCLGHGNEECE 299
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 38/253 (15%)
Query: 62 GVVYSFGSNSSGQLG--HGTTEEEWRP-------RPIR------------------SLQG 94
G +Y +G N GQLG G + P RPI+ +LQG
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014
Query: 95 IRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
R+I A G+G +T+ ++D V+++G +G+ G G+ P ++SL + VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVV 4072
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ G+ F+ L++ G VYT+ G+ RLGH ++ + P + G L+ V+ IA G
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSL 4131
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG---AW 269
+ + C G VY+ G G+LG G+ + PRL+ Q + V + AW
Sbjct: 4132 H--CVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4188
Query: 270 HAAVVGQDGRVCT 282
+ G++ T
Sbjct: 4189 STSKPANAGKLPT 4201
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
+G +Y +G + G+ G++G K V P E+L + +Q G ++ +G+V
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAK-VKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEA 4011
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
L+ V+ IA G L C V+S G G
Sbjct: 4012 --------------------------LQGYRVIDIACGSGDAQTL-CLTDDDTVWSWGDG 4044
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLG G K P I+ L L V V G+ + + + G V TWG G Y LG
Sbjct: 4045 DYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4102
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH---NAIA 349
HG+++ P+ VQ L K I +ATG +EDG+VY++G + LG NAI
Sbjct: 4103 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4162
Query: 350 DGQVCSLL 357
++ + L
Sbjct: 4163 RPRLVAAL 4170
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ VV A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 210
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3257
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVA 4083
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ +G VY +GK + +G V P+ V+ L+ V+ A G+ + +G
Sbjct: 4084 LTKSGAVYTWGKGDYHRLGHG--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
VYT+ ++ +LG T N ++ L+ L+ + ++A G + LA
Sbjct: 4142 VYTWGDNDEGQLGDGTT-NAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G VY++G N GQ G+GTT +P ++ L+G +I + A G+ ++
Sbjct: 3266 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 11/302 (3%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAGA 104
IAG +AV K G V++ G N SGQ G+GT EE P+R+L GI I + AA G
Sbjct: 507 IAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGC 566
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 163
+ ++ G VY++G + G+ G +K T P++++SL+ + + AA+ +AV
Sbjct: 567 EHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHSAV 625
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+S G + F + +LG + P L+ +L + + ++A G + +A+ SG
Sbjct: 626 VSSNGELLMFGMNDCGQLGLDHTQHQHTPQ-LVDSLSSQVITEVACGLYHTIAIT---SG 681
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
VYS G G+LG G + K P L++ + + V V+ G +H + + G++ T
Sbjct: 682 GEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLIT 741
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG YG LG G+++ ++ + V K + G Y T ++ +G V FG
Sbjct: 742 WGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQ 801
Query: 343 LG 344
LG
Sbjct: 802 LG 803
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 19/290 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSL-QGIRIIQAAAGAG 105
A G H +AV S G VYS+G N GQLG G+T + PR I SL + I AA
Sbjct: 562 AANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 621
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S G++ FG + G + G+ T+ +PQLV+SL + + + A G + T ++
Sbjct: 622 HSAVVSSNGELLMFGMNDCG--QLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT 679
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 223
G VY+F + +LG N P + +L + +V ++ GY + + ++
Sbjct: 680 SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTIS---EK 736
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVC 281
+ + G G+LG GS+ D K+ Q+ L L + A G +H ++ +GRV
Sbjct: 737 GKLITWGRNDYGQLGIGSK-DHKNS---AQYVPLPLSSKIKTASCGCYHTLILMSNGRVM 792
Query: 282 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVS 327
+G G LG G+ S +P +L + + + +A G Y++++++
Sbjct: 793 VFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQAAAGAGRTMLI 110
H+IA+TS G VYSFG N GQLG G P +++ G +I+ + G T+ I
Sbjct: 674 HTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTI 733
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S+ G++ +G++ +G+ G + K S Q V + + A+ G + T +L GRV
Sbjct: 734 SEKGKLITWGRNDYGQLGIGSKDHK--NSAQYVPLPLSSKIKTASCGCYHTLILMSNGRV 791
Query: 171 YTFSWGNDARL--GHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
F N +L G T P+ P P+ +L N VV+IAAG+ Y + SG
Sbjct: 792 MVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGF-YSSYILTGRSGE--- 847
Query: 228 SVGCGLGGKLGHGSRTDE 245
GCGL G S+ +
Sbjct: 848 --GCGLDGAPDDASQAKD 863
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 20/238 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS V+S G + FG N GQLG T+ + P+ + SL I + A G T+ I+
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSG 681
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTAVLSREGRV 170
G+VY+FGK+ +G + G+ + + P LV++ + +V + G + T +S +G++
Sbjct: 682 GEVYSFGKNDYG--QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKL 739
Query: 171 YTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
T+ + +LG H P PL ++ A+ CY + + V
Sbjct: 740 ITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMV 793
Query: 227 YSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 281
+ G G+LG GSRT P + L N + V +AAG + + ++ G+ G C
Sbjct: 794 F--GRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 20/269 (7%)
Query: 104 AGRT-MLIS----DAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQL-VESLKNIFVVQAA 155
AGRT L+S D ++++ G++++GE G +KL P +++++I A
Sbjct: 454 AGRTERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDI-----A 508
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GYCY 213
GN AV+ ++G V+T + G+ T V + L I + +AA G +
Sbjct: 509 GGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEH 568
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAA 272
+LA+A S AVYS G G+LG GS + H PR+I+ + A H+A
Sbjct: 569 MLAVA---SDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHHSA 624
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
VV +G + +G G LG + + + P++V +L+ VA G Y T ++ G+V
Sbjct: 625 VVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684
Query: 333 YSFGCGESASLGHNAIADGQVCSLLFLSI 361
YSFG + LG + +V +L+ S+
Sbjct: 685 YSFGKNDYGQLGLGHARNMKVPTLVKTSL 713
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR + S Q + + + G +++ G+V+++GK+ G + V + V P+++ES
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 251
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
L V A G T L+ G + F WG LG + + PH L G LE
Sbjct: 252 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 309
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ VV++A G + ++ S +++ G G G LGHG + P+ +E + L ++
Sbjct: 310 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 365
Query: 262 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
VA G WH A + + G++ TWG G LGH ++E + VP V+AL D
Sbjct: 366 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 424
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
V+ T ++ G V++ G E LG + + D +CS+
Sbjct: 425 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSV 469
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 24/295 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+AIA G H+ A+ G ++ +G ++S G +W P + L+G+ +++ A
Sbjct: 258 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 317
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +IS +GQ++ +G +FG +G T V P+ VESLK + V A G + TA
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 375
Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ + G+++T+ + +LGH + + + P + L + Q++
Sbjct: 376 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 434
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 271
+AL +G+ V+++G G+LG R D+ +E L + V +++G+ H
Sbjct: 435 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 488
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
AV+ +G+V TWG G G LG GN S P +V+AL D + +A G T V
Sbjct: 489 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 543
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ ++S G ++++G + G LGHG T RP+ + SL+G+R+ A G T I
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 377
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ +G+++ +G G+ + + +KLV P V++L + Q +
Sbjct: 378 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 435
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG H +D + G L+ V +I++G ++ L
Sbjct: 436 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 494
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 275
V++ G G G+LG G+ D P L+E + + + A H ++ G
Sbjct: 495 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 551
Query: 276 QDGRVC-------TWGWGRYGCLGHGNEECES 300
+D VC ++ ++ C G+ C S
Sbjct: 552 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 583
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
V+ P+L+ S + + V + G A+++++G V FSWG + RLGH + P
Sbjct: 191 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 247
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 251
++ +L V IA G + ALA SG ++ G G LG R+ +L
Sbjct: 248 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 304
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ +++ V +A G WH A++ G++ T+G G +G LGHG+ + PK V++L +
Sbjct: 305 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 362
Query: 312 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHN 346
+ VA G + T + E G ++++G + LGH+
Sbjct: 363 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHS 407
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H++ +T G V+S G+N SGQLGH + R + I L QAA GA
Sbjct: 65 QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTK--RLQMIPGLDAFIFKQAACGASH 122
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +++ GQ++ +G ++ G+ G T + +P++V++L VVQ A G T L+
Sbjct: 123 SVAVNNWGQLFCWGSNADGQLGLGTPLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTN 181
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALACQPSGMA 225
G +Y + +D +LG + +E P L T L IP+ IA G + ++ SG A
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVK-IETRPKLITGLATIPIAFIACGGYH--SIVVSKSG-A 237
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G G+LG +D+ P L++ L N + VA G + + DG V T G
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLK--TLRNAKVKYVACGEEFSVFLTMDGGVFTCGA 295
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 335
G YG LGHG E +P+ + L ++ G +T +V G VY++
Sbjct: 296 GMYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 104
QA G HS+AV + G ++ +GSN+ GQLG GT PR +++L ++Q A G
Sbjct: 114 KQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGK 173
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T+ +++ G++YA+G +S G+ G Q K+ T P+L+ L I + A G + + V+
Sbjct: 174 KHTLALTNNGELYAWGSNSDGQLGLG-QDVKIETRPKLITGLATIPIAFIACGGYHSIVV 232
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
S+ G V F WG + +LG + + P LL TL N V +A G + + L
Sbjct: 233 SKSGAV--FGWGRNTFGQLGMNDISDKYVP-CLLKTLRNAKVKYVACGEEFSVFLTMDG- 288
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 281
V++ G G+ G+LGHG+ ++E PR I +L+ ++ G H A+V G+V
Sbjct: 289 --GVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKVY 344
Query: 282 TW 283
W
Sbjct: 345 AW 346
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+ + +Y +GS G+LG G E+E PR + + + Q A G T+LI+ G+
Sbjct: 22 IPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGE 81
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V++ G + G+ + +L Q++ L QAA G + ++ G+++ +
Sbjct: 82 VFSCGNNDSGQLGHEKPTKRL----QMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
D +LG T ++ L VVQIA G + LAL + +Y+ G G
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT---NNGELYAWGSNSDG 194
Query: 236 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
+LG G E P+LI L + +A G +H+ VV + G V WG +G LG
Sbjct: 195 QLGLGQDVKIETRPKLITG--LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMN 252
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIAD 350
+ + VP +++ L + K +VA G+ + ++ DG V++ G G LGH N I
Sbjct: 253 DISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILP 312
Query: 351 GQVCSLL 357
Q+ L+
Sbjct: 313 RQIIELM 319
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
LI + +Y +G +GE G + + P+ ++ K V Q A G T +++++G
Sbjct: 21 LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V++ + +LGH ++ P L+ Q A G + +A+ + ++
Sbjct: 81 EVFSCGNNDSGQLGHEKPTKRLQMIP---GLDAFIFKQAACGASHSVAVN---NWGQLFC 134
Query: 229 VGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
G G+LG G+ H PR+++ L VV +A G H + +G + WG
Sbjct: 135 WGSNADGQLGLGTPLTIAHTPRMVKA---LGTSIVVQIACGKKHTLALTNNGELYAWGSN 191
Query: 287 RYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G + + E+ PK++ L + +A G Y + VVS+ G V+ +G LG
Sbjct: 192 SDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGM 251
Query: 346 NAIADGQVCSLL 357
N I+D V LL
Sbjct: 252 NDISDKYVPCLL 263
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HSI V+ G V+ +G N+ GQLG +++ P +++L+ ++ A G ++ ++
Sbjct: 228 HSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD 287
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ + L V Q + G T A++ G+VY
Sbjct: 288 GGVFTCGAGMYGQLGHGANSNEIL--PRQIIELMGSVVTQISCGKRHTLALVPSRGKVYA 345
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG T + P +LG
Sbjct: 346 WGLGGSGQLGSQTARSVATPQMVLG 370
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-G 114
+ VT V++ G+N SG LG G T+ PR + +L G +I + G+G ++++ A G
Sbjct: 35 LYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+VY +G +++ + G L+ Q+ +L N V + A G+ + +L+ +G VYT+
Sbjct: 95 EVYTWGHNAYSQLGNGTTNNSLLPC-QISTNLVNKKVTEVACGSHHSMILTSDGEVYTWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + L+N V IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACG--QMCSMAVVENG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 336
N +S P + D V I +T+ ++ VY +G
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T++G VY++G N+ QLG+GTT P I + L ++ + A G+ +M
Sbjct: 83 SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSM 141
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VY +G ++ G+ G + + P+ V S L+N V A G + +
Sbjct: 142 ILTSDGEVYTWGYNNSGQVGSGSTANQAI--PRRVTSCLQNKIAVNIACGQMCSMAVVEN 199
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---M 254
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G+LG G+R+++ +P I + ++ + A +A Q +V WG
Sbjct: 255 YAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIE-IAACHSAHTSAAKTQGSQVYMWGQC 313
Query: 287 R 287
R
Sbjct: 314 R 314
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 83 EWRPRPIRSLQGIRIIQAA----AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
+W RS + +++I+ A + + +++ +V+A G + G GV T+
Sbjct: 6 KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGC--LGVGDTQNSV 63
Query: 139 SPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
P+ +++L K I + G V + EG VYT WG++A +LG+ T N + P
Sbjct: 64 EPRRLDTLCGKKITCLSYGSGPH-VVVATAEGEVYT--WGHNAYSQLGNGTTNNSLLPCQ 120
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ L N V ++A G + + L S VY+ G G++G GS ++ PR +
Sbjct: 121 ISTNLVNKKVTEVACGSHHSMILT---SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSC 177
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L N V +A G + V ++G V WG+ G LG GN + P + AL ++
Sbjct: 178 -LQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQ 236
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VA G T V++++G +Y++G LG
Sbjct: 237 RVACGYAHTLVLTDEGQMYAWGANSYGQLG 266
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
++ ++ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ +
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNI 186
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 187 ACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQ--PTPCRIAALQGIRVQRVACGYAH 244
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG N P P+ T++ V++IAA
Sbjct: 245 TLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPI--TVDKDRVIEIAA 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+++G G LG G + PR ++ + + +G H V +G V TWG
Sbjct: 43 VFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGP-HVVVATAEGEVYTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G +P ++ L + K VA G + + +++ DG+VY++G S +G
Sbjct: 102 NAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 150/306 (49%), Gaps = 19/306 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H++ +T+ G VY+ GSN QLGH + + RP I L I Q A G+
Sbjct: 39 NQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK--RPLQIPELVDCVITQIACGSR 96
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +++ GQV ++G + G+ + +V P+ V +L + VVQ A GN + L+
Sbjct: 97 HSMALTEWGQVLSWGDNECGQLGHA-SDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT 155
Query: 166 REGRVYTFSWGND--ARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALAC 219
G +Y +WG++ +LG T E LL TL IPV IA G + +L++
Sbjct: 156 CCGELY--AWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLIS--- 210
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 --KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 266
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 338
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG G
Sbjct: 267 VFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLG 326
Query: 339 ESASLG 344
S LG
Sbjct: 327 SSGQLG 332
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 13/265 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
+Q G HS+A+T G V S+G N GQLGH + ++ + P+ +R+L ++Q A G
Sbjct: 89 TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGN 148
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 161
++ ++ G++YA+G + +G + GV+ + +P L+ +L I V A G +
Sbjct: 149 NHSLALTCCGELYAWGSNIYG--QLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHS 206
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPARGRI 320
Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG N + ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQMV 345
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 22/291 (7%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G+ S GQLG G E+E P + + Q A G T+ ++ +G+VYA G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGS 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ + + + + + + P+LV+ + + Q A G+ + L+ G+V SWG++
Sbjct: 63 NDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQV--LSWGDNECG 116
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH ++ + V+ + L + VVQIA G + LAL C +Y+ G + G+LG
Sbjct: 117 QLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTC---CGELYAWGSNIYGQLGV 173
Query: 240 GSRTDE---KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHG 294
+ ++ P L+ LL + +A G H+ ++ + V +GWGR C LG
Sbjct: 174 KTPSELGQCNAPMLLTT--LLGIPVRAIACGGNHSFLISKSSAV--FGWGRNNCGQLGLN 229
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 230 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 280
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+AIA G HS ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 197 RAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDE 256
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
++ +++ G V+ G ++G+ +G G +++ P++V L + Q A GN T A++
Sbjct: 257 FSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML--PRMVMELMGSTISQVACGNRHTLAMV 314
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y F G+ +LG + P ++G
Sbjct: 315 PARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIG 347
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 279
M +Y G G+LG G DE+ I + QP +A G H + G+
Sbjct: 1 MELYCWGNASHGQLGLGGIEDEQ----ILTPSKMPWQPDSAVNQIACGHRHTLFLTASGK 56
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V G Y LGH E P + L D +A G + ++E G V S+G E
Sbjct: 57 VYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNE 114
Query: 340 SASLGHNAIAD 350
LGH + D
Sbjct: 115 CGQLGHASDQD 125
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR + S Q + + + G +++ G+V+++GK+ G + V + V P+++ES
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 316
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
L V A G T L+ G + F WG LG + + PH L G LE
Sbjct: 317 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 374
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ VV++A G + ++ S +++ G G G LGHG + P+ +E + L ++
Sbjct: 375 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 430
Query: 262 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
VA G WH A + + G++ TWG G LGH ++E + VP V+AL D
Sbjct: 431 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 489
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
V+ T ++ G V++ G E LG + + D +CS+
Sbjct: 490 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSV 534
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 24/295 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+AIA G H+ A+ G ++ +G ++S G +W P + L+G+ +++ A
Sbjct: 323 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 382
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +IS +GQ++ +G +FG +G T V P+ VESLK + V A G + TA
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 440
Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ + G+++T+ + +LGH + + + P + L + Q++
Sbjct: 441 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 499
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 271
+AL +G+ V+++G G+LG R D+ +E L + V +++G+ H
Sbjct: 500 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 553
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
AV+ +G+V TWG G G LG GN S P +V+AL D + +A G T V
Sbjct: 554 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 608
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ ++S G ++++G + G LGHG T RP+ + SL+G+R+ A G T I
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 442
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ +G+++ +G G+ + + +KLV P V++L + Q +
Sbjct: 443 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 500
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG H +D + G L+ V +I++G ++ L
Sbjct: 501 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 559
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 275
V++ G G G+LG G+ D P L+E + + + A H ++ G
Sbjct: 560 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 616
Query: 276 QDGRVC-------TWGWGRYGCLGHGNEECES 300
+D VC ++ ++ C G+ C S
Sbjct: 617 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 648
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
V+ P+L+ S + + V + G A+++++G V FSWG + RLGH + P
Sbjct: 256 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 312
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 251
++ +L V IA G + ALA SG ++ G G LG R+ +L
Sbjct: 313 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 369
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ +++ V +A G WH A++ G++ T+G G +G LGHG+ + PK V++L +
Sbjct: 370 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 427
Query: 312 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHN 346
+ VA G + T + E G ++++G + LGH+
Sbjct: 428 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHS 472
>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 150/335 (44%), Gaps = 38/335 (11%)
Query: 47 QAIAGPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
A +GP HSI V G V SFG N GQLGHGTTE P+ I L+ I+QA+ G
Sbjct: 115 HAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGR 174
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G T++++DAG V+ FG + G+ G Q + P + + V + G F+ +L
Sbjct: 175 GHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLL 234
Query: 165 SREGRVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLEN 201
G +++F +LGH+T+ +V P L + +E
Sbjct: 235 DENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEG 294
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ + + G + +AL Q V++ G G G+LGH DE PRL+ F P
Sbjct: 295 VKIKDVVCGNNHTMALDEQ---GRVFTWGFGGYGRLGHQQPKDEHVPRLLTFFNTKG-NP 350
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
V+ AG+ ++ V G++ WG + + E PK VQ L+ + V
Sbjct: 351 SVIFAGSTYSMAVCM-GQLYFWGQTKQ------SGEAAMYPKPVQDLSGWQVRSVGCSK- 402
Query: 322 TTFVVSEDGDVYSFGCGES-ASLGHNAIADGQVCS 355
++ V++ D V S+G + LG+ GQ S
Sbjct: 403 SSIVIAADDSVVSWGPSPTYGELGYGLKKGGQKSS 437
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 58/320 (18%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGA 104
QA G GH++ +T G+V+ FG N GQ+G G + P P++ + ++ + GA
Sbjct: 169 QASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGA 228
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL--------------VESLKNIF 150
+ML+ + G +++FG +G+ + G +V+S ++ VE K+ F
Sbjct: 229 EFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGF 288
Query: 151 V--------VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
V GN T L +GRV+T+ +G RLGH +P D E P L T N
Sbjct: 289 VNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ-QPKD-EHVPRLLTFFNT 346
Query: 203 ---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-----HPRLIEQF 254
P V I AG Y +A+ G+L +T + +P+ ++
Sbjct: 347 KGNPSV-IFAGSTYSMAVCM---------------GQLYFWGQTKQSGEAAMYPKPVQDL 390
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGH----GNEECESVPKVVQALN 309
++ V + + V+ D V +WG YG LG+ G ++ + PK+V+ L
Sbjct: 391 SGWQVRSVGCSKS---SIVIAADDSVVSWGPSPTYGELGYGLKKGGQKSSTNPKIVEPLE 447
Query: 310 DVKAIHVATGDYTTFVVSED 329
D+ V G T +++D
Sbjct: 448 DIYVHSVTCGMGHTLFIAKD 467
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 130/328 (39%), Gaps = 33/328 (10%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A T +V + S S+ + T++ R + R + + T+LI
Sbjct: 20 AKTENEIVDAERSESATEPSDNGTDDHVRSEKANAASAERSEVSPSTPCGTLLICGGTNW 79
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF--FTAVLSREGRVYTFS 174
G+ ++ G L P L+ +L I V AA G + ++ +GRV +F
Sbjct: 80 DLIGRKELPKSAKNYGGPNLW-EPHLISTLSGIRVRHAASGPSACHSIIVCEDGRVMSFG 138
Query: 175 WGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LGH TE DV ++ L+ +VQ + G + L L V+ G
Sbjct: 139 RNDKGQLGHGTTERCDVPK--VIDRLKMHNIVQASCGRGHTLILT---DAGLVFGFGDNK 193
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G++G G + P ++ + + V GA + ++ ++G + ++G YG LGH
Sbjct: 194 LGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGH 253
Query: 294 GNE------------ECESVPK------------VVQALNDVKAIHVATGDYTTFVVSED 329
+ +CE +P+ V + VK V G+ T + E
Sbjct: 254 NTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQ 313
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLL 357
G V+++G G LGH D V LL
Sbjct: 314 GRVFTWGFGGYGRLGHQQPKDEHVPRLL 341
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 21/279 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP--RPIRSLQGIRIIQAAAGAGRTMLIS 111
H+ VT +G V+++G S G+LGHG ++ +P R L+G+++ G T L++
Sbjct: 289 HAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVT 348
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
GQ++ FG +FG +G + V P+ VESL + + A G + TA +
Sbjct: 349 SMGQLFTFGDGTFGVLGHGNREN--VAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQ 406
Query: 165 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ G+++T+ G+ RLGH + +EP + L + +IA G+ + L
Sbjct: 407 SSSSASSGKLFTWGDGDKNRLGHGDKEPRLEP-TCVPALIDYNFHKIACGHSLTVGLT-- 463
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ V+++G + G+LG+ D K P L+E +L +A GA+H A + V
Sbjct: 464 -TAGHVFTMGSTVYGQLGNPC-ADGKVPCLVED-KLYGESVEEIACGAYHVAALTSRNEV 520
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 521 YTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACG 559
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGT 198
P+ +ES + V A G A+++R+G V+T+ + RLGH + ++P + G
Sbjct: 269 PRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGP 328
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
LE + Q+A+ C A S +++ G G G LGHG+R + +PR +E L
Sbjct: 329 LEGL---QVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVE--SLAG 383
Query: 259 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
L+ + VA G WH A V + G++ TWG G LGHG++E P V A
Sbjct: 384 LRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPA 443
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
L D +A G T ++ G V++ G LG N ADG+V L+ ++
Sbjct: 444 LIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQLG-NPCADGKVPCLVEDKLY 497
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS G +++FG + G LGHG E PR + SL G+R I A G T +
Sbjct: 340 GPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAV 399
Query: 111 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 400 VEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRL--EPTCVPALIDYNFHKIACGHS 457
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T L+ G V+T +LG+ V P + L V +IA G ++ AL
Sbjct: 458 LTVGLTTAGHVFTMGSTVYGQLGNPCADGKV-PCLVEDKLYGESVEEIACGAYHVAALT- 515
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
S VY+ G G G+LGHG D K P ++E + +++ +A GA ++A +
Sbjct: 516 --SRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVK--YIACGANYSAAI 566
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 25/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV +G V+++G+ S GQLG G + + P+ I++L GI+IIQ + G ++
Sbjct: 54 GQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLA 113
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 114 LSEGGQVFSWGKNSQGQLGLGKEFPS-QDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGT 172
Query: 170 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+F WGN+ A G++ +P +G L N+ V+ I+ GY + L
Sbjct: 173 --SFGWGNNSAGQLALSGNNVPVQSYKPRS-IGALRNLGVIYISCGYEHTAVLT---QNG 226
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
V++ G G+LGH ++ P+L+E+ L Q + G++H A V G+V ++
Sbjct: 227 KVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQ---IDCGSYHTLAYVYTTGQVVSF 283
Query: 284 GWGRYGCLG---HGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVS 327
G G C H + E S + L DV+ H+ G Y FV +
Sbjct: 284 GRGP-SCRSSSTHPEAQIENFDISCLLSAEDLVDVQVKHIFAGTYANFVTT 333
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 13/265 (4%)
Query: 81 EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTS 139
EE P PIR+L+ +R+ + G ++ + G+V+A+G S G+ G V+G +
Sbjct: 32 EETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINF--T 89
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTE-PNDVEPHPLL 196
P+ +++L I ++Q + G++ + LS G+V FSWG +++ LG E P+ P +
Sbjct: 90 PKKIKTLTGIKIIQVSCGDYHSLALSEGGQV--FSWGKNSQGQLGLGKEFPSQDSPQ-RV 146
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
+LE IP+ Q+AAG + AL+ + + G G+ PR I L
Sbjct: 147 RSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG--AL 204
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
NL + ++ G H AV+ Q+G+V T+G G LGH + P++V+ ++ + + +
Sbjct: 205 RNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVS-QI 263
Query: 317 ATGDYTTFV-VSEDGDVYSFGCGES 340
G Y T V G V SFG G S
Sbjct: 264 DCGSYHTLAYVYTTGQVVSFGRGPS 288
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 103 QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGA 162
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S +G + +G +S G+ + + P+ + +L+N+ V+ + G TAVL
Sbjct: 163 HSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVL 222
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++ G+V+TF + +LGH D P L+ ++ + V QI G + LA
Sbjct: 223 TQNGKVFTFGDNSCGQLGHSPSAQDRGPQ-LVERIDGL-VSQIDCGSYHTLAY------- 273
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQL 256
VY+ G + G R+ HP IE F +
Sbjct: 274 -VYTTGQVVSFGRGPSCRSSSTHPEAQIENFDI 305
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+NS+GQL G+ + ++PR I +L+ + +I +
Sbjct: 155 AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISC 214
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG +S G + G + PQLVE + + V Q G++ T
Sbjct: 215 GYEHTAVLTQNGKVFTFGDNSCG--QLGHSPSAQDRGPQLVERIDGL-VSQIDCGSYHTL 271
Query: 162 AVLSREGRVYTFSWGNDAR 180
A + G+V +F G R
Sbjct: 272 AYVYTTGQVVSFGRGPSCR 290
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
F D + ++ TK +P+ + +L+ + V + G + + GRV+ + G++
Sbjct: 19 FSVDFMPPSNSPLEETK---NPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSE 75
Query: 179 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+LG + + P + TL I ++Q++ G + LAL+ G V+S G G+L
Sbjct: 76 GQLGTGEVKGINFTPKKI-KTLTGIKIIQVSCGDYHSLALS---EGGQVFSWGKNSQGQL 131
Query: 238 GHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--CLGHG 294
G G + P+ + + + L VAAG H+ + G WG G L
Sbjct: 132 GLGKEFPSQDSPQRVRSLEGIPL--AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGN 189
Query: 295 NEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
N +S P+ + AL ++ I+++ G T V++++G V++FG LGH+ A +
Sbjct: 190 NVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDR 248
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 158/346 (45%), Gaps = 57/346 (16%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---------------------- 83
+Q G HS+A+TS G V+++G N + QLG +E
Sbjct: 176 TQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDE 235
Query: 84 ------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
RPR +R+L G +I+Q GA ++++S+ G V+A+G ++ G + +
Sbjct: 236 LDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG--QLCL 293
Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND 189
+ K V P LV+ L I + Q A G T L+ G+VY SWGN+ +LG D
Sbjct: 294 RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVY--SWGNNQFGQLG----VGD 347
Query: 190 VEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
PH + L TLE+ IA G + + L VYS G G G+LGHG+ +E
Sbjct: 348 TAPHTIPSRLKTLEHQFCAHIACGEDHSVVLT---ETGGVYSFGAGGQGQLGHGTLQNEI 404
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHG----NEECESV 301
+PR+I F+L+ V G H V + ++ +G G G LG G ++
Sbjct: 405 NPRMI--FELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLT 462
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P +V+ L+ + +ATG + + G+ G ESA L +A
Sbjct: 463 PMLVRVLDATPILRIATGASASHCFAVVGNRNHVGAAESAQLPWDA 508
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 30/314 (9%)
Query: 46 SQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
+ AIA G H++ + G VYS GSN GQLGH + +P + +L+ I Q A G
Sbjct: 126 ASAIACGRAHTLFLVD-GQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGE 182
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ ++ GQV+A+G + ++ G+ ++ P S A+I +
Sbjct: 183 THSLALTSNGQVFAWGDNK--ASQLGLTPSESSRQPSTRSSAPK--TAAASIDD------ 232
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
V A + T P L+ L +VQI G + L L+ +
Sbjct: 233 -----VDELDAATLAYMDFMTRPR------LVRALTGHKIVQIVCGANFSLVLSERGD-- 279
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+L P L+++ + ++ + AAG H + +G+V +WG
Sbjct: 280 -VFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQL--AAGGRHTLALTFNGQVYSWG 336
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++G LG G+ ++P ++ L H+A G+ + V++E G VYSFG G LG
Sbjct: 337 NNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLG 396
Query: 345 HNAIADGQVCSLLF 358
H + + ++F
Sbjct: 397 HGTLQNEINPRMIF 410
>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 148/312 (47%), Gaps = 30/312 (9%)
Query: 46 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L ++ AA G
Sbjct: 56 SCVVSGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 115
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ ++D G VY+FG++ G+ G Q T V SP L+ S +V+ A G F+ V
Sbjct: 116 RNHTLALTDDGSVYSFGENKLGQLGQGSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 173
Query: 164 LSREGRVYTFSWGNDARLGHHTEPN------------DVEPHPLLGTLENIPVVQIAAGY 211
+ +G +Y+F +LGH+++ ++ P + +E Q+
Sbjct: 174 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 233
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+L L Q V+S G G G+LGH + DE PRLI+ F + G +
Sbjct: 234 NVVLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCS 290
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
V ++G + WG + + + E PKVV L K +A G ++ +++ D
Sbjct: 291 FAVSENGGLFFWG------VTNTSRESTMYPKVVPDLCGWKIRSLACGK-SSIIIAADES 343
Query: 332 VYSFG----CGE 339
++G CGE
Sbjct: 344 TITWGPSPTCGE 355
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 44 PH-RYGCLNDVQVSCVVSGPCAAHSLLITAEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 101
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E L + V A G H + DG V ++G + G LG G++ + + + +
Sbjct: 102 EG--LADHLVVAAACGRNHTLALTDDGSVYSFGENKLGQLGQGSQTYAVLSPALISYDGQ 159
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ VA G + VV G++YSFGC E LGHN+
Sbjct: 160 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNS 195
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
GR + G++ +G YG VQ + +V+ P SL
Sbjct: 23 GRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL-------------- 68
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+++ EG+++++ + +LGH + +E L+ L + VV A G + LAL
Sbjct: 69 --LITAEGKLWSWGRNDKGQLGH-GDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDD 125
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
S VYS G G+LG GS+T P LI + QP+V VA GA + VV G
Sbjct: 126 GS---VYSFGENKLGQLGQGSQTYAVLSPALIS----YDGQPLVKVACGAEFSMVVDCKG 178
Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQA-LNDVKAIHVATGDYTTFV 325
+ ++G YG LGH ++ +CE +P+ + + K V V
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVLV 238
Query: 326 VSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
+ V+S+G G LGH D V L+ L F
Sbjct: 239 LDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLIKLFDF 275
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
+ ++ Q + P + + S+ V+S+G G+LGH ++E P R+I+
Sbjct: 223 KSKDGQVMPVPNVVLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP---------RLIKLF 273
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAE------YGVQGTKLVTS--PQLVESLKNIFVVQ 153
GR A Q+Y + SF +E +GV T ++ P++V L +
Sbjct: 274 DFPGR-----GASQIYTGYQCSFAVSENGGLFFWGVTNTSRESTMYPKVVPDLCGWKIRS 328
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAA 209
A G + + E T +WG G +P + TL+ + V ++
Sbjct: 329 LACGKSSIIIAADES---TITWGPSPTCGELGYGDNKPKSSTTAQEVKTLDGVYVEKVMM 385
Query: 210 GYCYLLALACQPS 222
GY + L +A Q +
Sbjct: 386 GYSHSLVIARQDT 398
>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 24/291 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ I L+G+ + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 165 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAI 624
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 23/287 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
L V A G F T ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGL 389
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V + G + + S +++ G G G LGHG R ++PR +E L L+ +
Sbjct: 390 HVASVTCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDRETVQYPREVES--LSGLRTI 444
Query: 263 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N DG++ L+
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLV 550
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 30/330 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGAG 105
Q G H+ VT +G ++++G S G+LGHG ++ + PR + SL + A G
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAV 163
T ++ AG++Y +G + G G+ + ++ L+ + V G + TA+
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGCLEGLHVASVTCGPWHTAL 403
Query: 164 LSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
++ GR++TF G LGH P +VE +L + + ++ G + A+
Sbjct: 404 ITSYGRLFTFGDGTFGVLGHGDRETVQYPREVE------SLSGLRTIAVSCGVWHTAAVV 457
Query: 219 ---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
S +++ G G +LGHG + P + N +
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACG---- 513
Query: 270 HAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
H+ VG G+V T G YG LG+ + + V L ++ G Y ++
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573
Query: 328 EDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+VY++G G + LGH + D +V +L+
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTLV 603
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 254
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGC 385
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L L V G WH A++ GR+ T+G G +G LGHG+ E P+ V++L+ ++ I
Sbjct: 386 -LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRTI 444
Query: 315 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGH 345
V+ G + T V E G ++++G G+ LGH
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH 487
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A+ S G V+++G SG+LG GT P PI L GI I +AG T+
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
+ G ++ S+G+ +YG GT T+ + ++ I + + G + V+ +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+++ N +LG+ T N+ PH + G L I + ++AG + AL S V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALK---SDGTVWN 258
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 287
GC G+L +G++ D P Q L ++ W ++ + DG WG
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG+G++ + P V +L+ + AI TG T + DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 18/241 (7%)
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
I +AG T+ + + G V+++G + G G T SP V+ L I + A
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGT--TSNSNSPVQVKGLNGITAISAGWA 95
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+F L +G V+T+ G LG T P P+ G + I+AG+ + LAL
Sbjct: 96 HFV--ALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG---ITAISAGWNHTLAL 150
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQ 276
+ ++S G G+LG G+ T+ P + Q + + +++G H+ V+
Sbjct: 151 KADGT---LWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITS-----ISSGGGHSLVIKN 202
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V +WG +G LG+G P + LN + I+V+ G + + DG V+++G
Sbjct: 203 DGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGI--INVSAGVIHSTALKSDGTVWNWG 260
Query: 337 C 337
C
Sbjct: 261 C 261
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 18/258 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ + G ++S+G N GQLG G T P + GI I ++G G +++
Sbjct: 142 AGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSI--SSGGGHSLV 199
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I + G V+++G ++FG+ G +P + L I V A + + L +G
Sbjct: 200 IKNDGTVWSWGCNNFGQLGNGTNSNN--PTPHQISGLNGIINVSAGV--IHSTALKSDGT 255
Query: 170 VYTFSWGNDARLGHHTEPNDVEPH-PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WG + R G N ++ + P+ N ++ I AG+ + A+ S +
Sbjct: 256 VW--NWGCNFR-GELANGNKIDSYIPVQANGLN-GIIAITAGWEFSSAIK---SDGTFWV 308
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG+GS++D P + + + GA + + DG + +G Y
Sbjct: 309 WGVNDYGQLGNGSKSDVTSPMQVSSLSGI----TAIDTGATYTVALKTDGNIFAFGENTY 364
Query: 289 GCLGHGNEECESVPKVVQ 306
G LG+G + P++V
Sbjct: 365 GQLGNGTTTGSTTPELVS 382
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
+ V+AG + DG V +WG+ + G LG G + P V+ LN + AI +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 322 TTFVVSEDGDVYSFGCGESASLGH 345
+ DG V+++G G S LG
Sbjct: 98 --VALKSDGTVWTWGVGYSGELGD 119
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFS 174
V ++G+ G+ +G +L+ P + + +V G +T S+ G+ VY++
Sbjct: 70 VCSWGRGEDGQLGHGDTDDRLL--PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 127
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
WG+ RLGH + PHP+ L+ + + QI+ G C+ LA+ + V S G
Sbjct: 128 WGDFGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVTMENK---VLSWGRNQN 183
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ D P+ I F+ + ++ +VAAGA H+ + +DG + WGWGRYG LG G
Sbjct: 184 GELGLGTTKDSHVPQKILAFEGIRIK--MVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 241
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ +P+ V D K + V+ G T +S G +Y+ G + LGH D
Sbjct: 242 DTNDRLIPEKVNIDGD-KIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED 296
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 28 KLVLRFLLAGE------ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 81
+++ RFL++ C + N+ A+ PG+ VV S+G GQLGHG T+
Sbjct: 36 EMLARFLISTPLLPESWRLCSKVNASAVNFPGN--------VVCSWGRGEDGQLGHGDTD 87
Query: 82 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSP 140
+ P + + G I+ GA T+ S +G+ VY++G FG +G + P
Sbjct: 88 DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP 147
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +L+ + + Q + G+ ++ E +V ++ + LG T + P +L E
Sbjct: 148 --IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKIL-AFE 204
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
I + +AAG + +A+ +Y G G G LG G D P E+ + +
Sbjct: 205 GIRIKMVAAGAEHSVAITEDGD---LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGDK 258
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V+V+ G H + G + T GW +YG LGHG+ E VP+ VQAL+D
Sbjct: 259 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSD 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
L+++P L ES + V A+ NF V+ GR G D +LGH + + P L
Sbjct: 42 LISTPLLPESWRLCSKVNASAVNFPGNVVCSWGR------GEDGQLGHGDTDDRLLPTKL 95
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ +V + G Y +A + SG VYS G G G+LGHG +D P I Q
Sbjct: 96 -SAFDGQDIVSVTCGADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQ 152
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 315
L ++ + + G H V + +V +WG + G LG G + VP+ + A ++
Sbjct: 153 GLRIKQI--SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKM 210
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLG 344
VA G + ++EDGD+Y +G G +LG
Sbjct: 211 VAAGAEHSVAITEDGDLYGWGWGRYGNLG 239
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A A G V S G G G+LGHG D P + F ++ V V GA +
Sbjct: 60 ASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARS 117
Query: 276 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G+ V +WGWG +G LGHG+ +P ++AL ++ ++ GD V+ + V S
Sbjct: 118 KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLS 177
Query: 335 FGCGESASLGHNAIADGQV 353
+G ++ LG D V
Sbjct: 178 WGRNQNGELGLGTTKDSHV 196
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 34/280 (12%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+I G +L+S+ G VY V T+ + P+++E+ I V Q A
Sbjct: 76 KIEAVGCGDDEVILLSEKGSVYR------------VDVTQALYLPRMLEAFCRIPVSQVA 123
Query: 156 IGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
G+ T L++EG+VYT WG ++R LG + + + +L +P+VQ++AG +
Sbjct: 124 CGSRHTVALTKEGQVYT--WGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
AL+ S V+ G G+LG G D P ++ LNL+ ++ G H A
Sbjct: 182 SFALSVSGS---VFGWGRNDCGQLGLGDSQDRCTPTSVDS---LNLKKTTSISCGKDHTA 235
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
++ + G V T+G G++G LGH + E P++V L K +A G Y T V+ E+ +
Sbjct: 236 ILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKI 295
Query: 333 YSFGCGESASLGHNAIADGQV-----------CSLLFLSI 361
YSFGC + LG + + V CSLL+ I
Sbjct: 296 YSFGCNDQNQLGRSNDSHPSVPLPVLLPQVYKCSLLYREI 335
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 10/212 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIR 96
EA CR SQ G H++A+T +G VY++G NS GQLG G P+ +RSL G+
Sbjct: 112 EAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMP 171
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++Q +AG + +S +G V+ +G++ G + G+ ++ +P V+SL +
Sbjct: 172 LVQVSAGGDHSFALSVSGSVFGWGRNDCG--QLGLGDSQDRCTPTSVDSLNLKKTTSISC 229
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G TA+L++ G V+TF G +LGH++ N++ P L+ L V +IA G + L
Sbjct: 230 GKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR-LVAELWGAKVTRIACGRYHTLV 288
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
L +YS GC +LG R+++ HP
Sbjct: 289 LQ---ENNKIYSFGCNDQNQLG---RSNDSHP 314
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS A++ G V+ +G N GQLG G +++ P + SL + + G
Sbjct: 174 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDH 233
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G V+ FG FG+ + +L P+LV L V + A G + T VL
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNEL--RPRLVAELWGAKVTRIACGRYHTLVLQE 291
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
++Y+F + +LG + + P P+L
Sbjct: 292 NNKIYSFGCNDQNQLGRSNDSHPSVPLPVL 321
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ + VV S+G GQLGHG T++ P + + G I+ GA T+
Sbjct: 19 AGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA 78
Query: 110 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G+ VY++G FG +G + P + +L+ + + Q + G+ ++ E
Sbjct: 79 RSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMEN 136
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+V ++ + LG T + P +L E I + +AAG + +A+ +Y
Sbjct: 137 KVLSWGRNQNGELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGAEHSVAITEDGD---LYG 192
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G LG G D P E+ + + V+V+ G H + G + T GW +Y
Sbjct: 193 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249
Query: 289 GCLGHGNEECESVPKVVQALND 310
G LGHG+ E VP+ VQAL+D
Sbjct: 250 GQLGHGDFEDCLVPRKVQALSD 271
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
V+ + G T L V ++ G D +LGH + + P L + +V + G
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKL-SAFDGQDIVSVTCG 72
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
Y +A + SG VYS G G G+LGHG +D P I Q L ++ + + G H
Sbjct: 73 ADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI--SCGDCH 128
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
V + +V +WG + G LG G + VP+ + A ++ VA G + ++EDG
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 188
Query: 331 DVYSFGCGESASLG 344
D+Y +G G +LG
Sbjct: 189 DLYGWGWGRYGNLG 202
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT + V S+G N +G+LG GTT++ P+ I + +GIRI AAGA
Sbjct: 121 QISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEH 180
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G +Y +G +G G +L+ ++ K +V + G T +S
Sbjct: 181 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK---IVMVSCGWRHTISISS 237
Query: 167 EGRVYTFSWGNDARLGH 183
G +YT W +LGH
Sbjct: 238 SGGLYTHGWSKYGQLGH 254
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ I+AG + +AL +G V S G G G+LGHG D P + F ++ V
Sbjct: 14 VLLISAGASHTVALL---TGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VS 68
Query: 264 VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
V GA + + G+ V +WGWG +G LGHG+ +P ++AL ++ ++ GD
Sbjct: 69 VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH 128
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
V+ + V S+G ++ LG D V
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSHV 159
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N SG LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V+ IA G + ++A +G VY G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H A +T+ S+ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKSQGGHVYMWGQCRGQSVILPH 346
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
Q+YA+G +S+G+ G + + +P +VE I + A +A S+ G VY
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKSQGGHVYM-- 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + DG V TWG
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
Length = 409
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 147/326 (45%), Gaps = 25/326 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFG-----SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
Q AG H VT + +Y++ ++ +GQLGHG T P+ + +L I + Q +
Sbjct: 25 QVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVS 84
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNF 159
G T+ ++D G VY+FG D +G G QG SP LV N V+Q + G+
Sbjct: 85 CGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDA 144
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALA 218
L++EG VYT+ G RLG TE + P + I V ++L
Sbjct: 145 HVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVHAGPDGSFILR-- 202
Query: 219 CQPSGMAVYSVGCGLGGKLG-----HGSRTDEKHPRLIEQFQLLNLQP------VVVAAG 267
+ + S G KLG G R+ + + + ++P V V+ G
Sbjct: 203 ---TNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNIVAVSPG 259
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H+AV+ G + T+G +YG LG G+ +E ++V V +L VA GD +T +
Sbjct: 260 QTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACGDRSTVIA 319
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQ 352
+ D +YS G E+ LG A G+
Sbjct: 320 TSDNLIYSCGFSENGRLGFAAGETGK 345
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGR-----YGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V+AG H AVV + + TW + G LGHG+ PK V+AL+ + V+
Sbjct: 26 VSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVSC 85
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ--VCSLLFLSIF 362
G+ T V++DG VYSFG LG+ DG+ CS +S F
Sbjct: 86 GEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFF 131
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 14/316 (4%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 83
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 84 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 141
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+ +L N A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 320
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 321 YTTFVVSEDGDVYSFG 336
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
G HS+ +T G VY++G N+SGQ+G G+T + PR + S LQ +I A G +M
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ D G+VYA+G + G+ G G + +P + +L+ I V Q G T L+ EG
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + + +LG + N + +P+ ++ +V+IAA + + A SG VY
Sbjct: 253 MYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQ-VYMW 309
Query: 230 GCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 261
G G L H S TD+ P ++ ++LL+++P
Sbjct: 310 GQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR I+ + + +G H +V DG V +WG
Sbjct: 42 VFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGH 100
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G+ P +V L + KA VA G + + V++ DG+VY++G S +G
Sbjct: 101 NAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVG 160
Query: 345 HNAIAD 350
+ A+
Sbjct: 161 SGSTAN 166
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFS 174
V ++G+ G+ +G +L+ P + + +V G +T S+ G+ VY++
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLL--PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 182
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
WG+ RLGH + PHP+ L+ + + QI+ G C+ LA+ + V S G
Sbjct: 183 WGDFGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVTMENK---VLSWGRNQN 238
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ D P+ I F+ + ++ +VAAGA H+ + +DG + WGWGRYG LG G
Sbjct: 239 GELGLGTTKDSHVPQKILAFEGIRIK--MVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ +P+ V D K + V+ G T +S G +Y+ G + LGH D
Sbjct: 297 DTNDRLIPEKVNIDGD-KIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED 351
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ-VYA 118
S VV S+G GQLGHG T++ P + + G I+ GA T+ S +G+ VY+
Sbjct: 121 SGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYS 180
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G FG +G + P + +L+ + + Q + G+ ++ E +V ++ +
Sbjct: 181 WGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQN 238
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
LG T + P +L E I + +AAG + +A+ +Y G G G LG
Sbjct: 239 GELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGAEHSVAITEDGD---LYGWGWGRYGNLG 294
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
G D P E+ + + V+V+ G H + G + T GW +YG LGHG+ E
Sbjct: 295 LGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED 351
Query: 299 ESVPKVVQALND 310
VP+ VQAL+D
Sbjct: 352 CLVPRKVQALSD 363
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G +++A + G VYS+G G+LGHG + + P PIR+LQG+RI Q + G +
Sbjct: 164 GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLA 223
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ +V ++G++ G E G+ TK PQ + + + I + A G + ++ +G
Sbjct: 224 VTMENKVLSWGRNQNG--ELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGD 281
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + WG LG + + P + ++ +V ++ G+ + ++++ S +Y+
Sbjct: 282 LYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISIS---SSGGLYTH 336
Query: 230 GCGLGGKLGHGSRTDEKHPRLIE 252
G G+LGHG D PR ++
Sbjct: 337 GWSKYGQLGHGDFEDCLVPRKVQ 359
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 19/235 (8%)
Query: 136 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN--DVEPH 193
L+++P L ES + V A+ NF + V+ R G V ++ G ++P+ +EP
Sbjct: 19 LISTPLLPESWRLCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSDPSWRTLEPL 78
Query: 194 ------PLLGTLENIP---VVQIAAGYCYLLA-----LACQPSGMAVYSVGCGLGGKLGH 239
PL T N V++ +G L + + Q SG V S G G G+LGH
Sbjct: 79 ESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGH 138
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 298
G D P + F ++ V V GA + + G+ V +WGWG +G LGHG+
Sbjct: 139 GDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSD 196
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+P ++AL ++ ++ GD V+ + V S+G ++ LG D V
Sbjct: 197 LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHV 251
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 158 NFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
+ F ++ ++ SWG D +LGH + + P L + +V + G Y +
Sbjct: 111 SLFNSIQNQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKL-SAFDGQDIVSVTCGADYTV 169
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A + SG VYS G G G+LGHG +D P I Q L ++ + + G H V
Sbjct: 170 ARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI--SCGDCHCLAVT 225
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ +V +WG + G LG G + VP+ + A ++ VA G + ++EDGD+Y +
Sbjct: 226 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGW 285
Query: 336 GCGESASLGHNAIAD 350
G G +LG D
Sbjct: 286 GWGRYGNLGLGDTND 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H +AVT + V S+G N +G+LG GTT++ P+ I + +GIRI AAGA
Sbjct: 213 QISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEH 272
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I++ G +Y +G +G G +L+ ++ K +V + G T +S
Sbjct: 273 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK---IVMVSCGWRHTISISS 329
Query: 167 EGRVYTFSWGNDARLGH 183
G +YT W +LGH
Sbjct: 330 SGGLYTHGWSKYGQLGH 346
>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
Length = 474
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 41/327 (12%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ + ++FG N QLGHG T +P + L +IQAA G T+ ++D
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLTDT 176
Query: 114 GQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G VYA G + G+ GV G KL +TSP + S +++ G F+ +L +G ++
Sbjct: 177 GTVYACGDNKSGQC--GV-GNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLH 232
Query: 172 TFSWGNDARLGHHTEPN------------DVEPHPLLG-----------TLENIPVVQIA 208
TF +LGH+T+ + +P +L +EN+ ++ A
Sbjct: 233 TFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIIDFA 292
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G + +A+ S YS G G G+LGH + DE PRLI+ F N + + V G+
Sbjct: 293 CGNNHTVAID---SKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGS 349
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
++ + G + +G + E PK VQ L + TG YT+ V+S
Sbjct: 350 SYSLAISDIGSLYLFGQNK------KTGEANMYPKPVQDLAGWNITSIGTG-YTSIVISA 402
Query: 329 DGDVYSFGCGESASLGHNAIADGQVCS 355
D + ++G S + G + D Q S
Sbjct: 403 DDSLIAWGA--SPTYGELGLGDLQKSS 427
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 41/300 (13%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA G H++ +T G VY+ G N SGQ G G S G II+ GA
Sbjct: 162 QAACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISYNGPPIIKVGCGAEF 221
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------VE 144
++++ G ++ FG +G+ + G V S ++ V
Sbjct: 222 SVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVL 281
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
++N+ ++ A GN T + + R Y++ +G RLGH + +++ P + +N
Sbjct: 282 PIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRK 341
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 261
V+++ G Y LA++ G G +T E +P+ ++ N+
Sbjct: 342 VMRVFCGSSYSLAIS-----------DIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITS 390
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVATG 319
+ + + V+ D + WG YG LG G+ ++ S PK V + +K VA G
Sbjct: 391 I---GTGYTSIVISADDSLIAWGASPTYGELGLGDLQKSSSTPKEVTRMEGMKIPMVALG 447
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 34/223 (15%)
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ ++ + +TF ++LGH +P + L + V+Q A G + L L
Sbjct: 118 SVLIDENWKAFTFGRNQLSQLGHGDTVTCEKP-TQVADLADFNVIQAACGRNHTLFLT-- 174
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVV-VAAGAWHAAVVGQDG 278
VY+ G G+ G G+ K P + ++ N P++ V GA + ++ G
Sbjct: 175 -DTGTVYACGDNKSGQCGVGN----KLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKG 229
Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAI 314
+ T+G YG LGH + E+ P+ V + +V I
Sbjct: 230 NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNII 289
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
A G+ T + YS+G G LGH D V L+
Sbjct: 290 DFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLI 332
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
A H+ ++ ++ + T+G + LGHG+ P V L D I A G T ++
Sbjct: 115 AAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLT 174
Query: 328 EDGDVYSFGCGESAS 342
+ G VY+ CG++ S
Sbjct: 175 DTGTVYA--CGDNKS 187
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N SG LG G + PR + SL G +I + G+G +L + G
Sbjct: 68 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 127
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 128 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 186
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V+ IA G + ++A +G VY G
Sbjct: 187 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGN 243
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG YG LG G
Sbjct: 244 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTG 301
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNA 347
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H+
Sbjct: 302 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHT 357
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 160 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 219
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 220 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 277
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 278 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 324
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 226 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 285
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 286 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 344
Query: 175 W--GNDARLGHHT 185
G L HHT
Sbjct: 345 QCRGQSVILPHHT 357
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + DG V TWG
Sbjct: 76 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 134
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 135 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 194
Query: 345 HNAIAD 350
+ A+
Sbjct: 195 SGSTAN 200
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 30/326 (9%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTMLI 110
S+AV S G Y++G N+ GQLG TT P +R G+ +Q +AG ++ +
Sbjct: 572 SLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLAL 631
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLV-----TSPQLVESLKNIFVVQAAIGNFFTAVLS 165
G VYA+G + G+ + V + K + +Q + G+ + L
Sbjct: 632 GSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALD 691
Query: 166 REGRVYTFSWGNDARLGHHTEPNDV------EPHPLLGTLENIPVVQIAAGYCYLLALAC 219
G VY + W ++ RLG+++ + +P + + VQ++AG+ + LA+
Sbjct: 692 SNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVG- 750
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-----LQPVVVAAGAWHAAVV 274
S Y+ G G+LG+ S+ P + F N L+ V V+AG H+ V
Sbjct: 751 --SDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAV 808
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-------ALNDVKAIHVATGDYTTFVVS 327
G DG WG YG LG+ N +VP V+ A +KA + G + V
Sbjct: 809 GSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVG 868
Query: 328 EDGDVYSFGCGESASLGHNAIADGQV 353
+G Y++G LG ++ V
Sbjct: 869 NNGYAYAWGWNLYRQLGDGTTSNSSV 894
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 153/355 (43%), Gaps = 58/355 (16%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-------RPIRSLQGIRIIQ 99
Q AG HS+A+ S G VY++GSN GQLG+ T P P +G++ IQ
Sbjct: 620 QVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQ 679
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLKNIFVV 152
+AG ++ + G VYA+G + G G T + P V + K + V
Sbjct: 680 VSAGDEHSLALDSNGYVYAWGWNDNG--RLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737
Query: 153 QAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTE--------------PNDVEPHPLL 196
Q + G + + +G YT++WG N +LG+ ++ PND
Sbjct: 738 QVSAGWHHSLAVGSDG--YTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDAN----- 790
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQ 255
+ + VQ++AGY + LA+ S Y+ G G+LG+ + D P R+ +
Sbjct: 791 ---KGLKAVQVSAGYSHSLAVG---SDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTS 844
Query: 256 LLN----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----- 306
+ L+ + AG H+ VG +G WGW Y LG G SVP V+
Sbjct: 845 PKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP 904
Query: 307 --ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV-CSLLF 358
A ++A + GD+ + V +G Y++G LG D V S+LF
Sbjct: 905 ADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLF 959
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ--LLNLQPVVVAAGA 268
Y Y+ +LA G A Y+ G G+LG + P ++ + + V V+AG
Sbjct: 567 YTYVFSLAVGSDGKA-YAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGK 625
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALND------VKAIHVATGDY 321
WH+ +G DG V WG ++G LG+ + SVP +V N +KAI V+ GD
Sbjct: 626 WHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDE 685
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ + +G VY++G ++ LG+N+ D V
Sbjct: 686 HSLALDSNGYVYAWGWNDNGRLGNNSTTDSSV 717
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQ 99
Q AG HS+AV S G Y++G N+ GQLG+ + P +R +G++ +Q
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLV-----TSPQLVESLKNIFVV 152
+AG ++ + G YA+G +++G+ V T V TSP+ ++ K +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPK--DASKGLKAT 855
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL------ENIPVVQ 206
G + + G Y + W +LG T N P P+ + + +
Sbjct: 856 AINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATR 915
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
+ G + LA+ +G A Y+ G G+LG G+ D P + L NLQPV+ AA
Sbjct: 916 FSVGDHHSLAVGS--NGYA-YAWGENSYGQLGDGTTDDSNVPVSV----LFNLQPVITAA 968
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 14/298 (4%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 31 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 90
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+ +G+ G+ G P+L+E+LK + A G+
Sbjct: 91 HSGGRHATALTVD-GKVFWWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 147
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 148 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLAL 206
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 207 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 262
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 263 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 320
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G N QLG + P +L + ++Q A G+ ++ G+VYA G+ + G
Sbjct: 2 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + V P+ + +L + V + A+ G L+ +G+V+ + G+D +LGH
Sbjct: 62 LGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHF 120
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T
Sbjct: 121 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTT 176
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVP 302
+ P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P
Sbjct: 177 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 234
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 235 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 279
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA + G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+
Sbjct: 132 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV 191
Query: 98 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
IQ A G+ +T+ ++D G V+++G FG+ G G++ PQ +E L V Q
Sbjct: 192 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIE 249
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G F+ L++ G V+T+ G+ RLGH ++ + +P + G L +V +A G + L
Sbjct: 250 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCL 308
Query: 216 AL 217
A+
Sbjct: 309 AV 310
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 240 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 294
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+I+ A GA + ++D+GQVYA+G + G+
Sbjct: 295 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 326
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 25/312 (8%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 177 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 236
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 237 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 292
Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 293 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQIFTYGDG 349
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 282
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 350 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 407
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467
Query: 343 LGHNAIADGQVC 354
LG+ D +C
Sbjct: 468 LGNPLSEDTSIC 479
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 146/300 (48%), Gaps = 34/300 (11%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 270 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 329
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +IS AGQ++ +G +FG +G T V P+ VESLK + A G + TA
Sbjct: 330 GHWHTAIISSAGQIFTYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 387
Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 388 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 441
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 442 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 495
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 496 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 439 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 498
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 499 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 142/312 (45%), Gaps = 20/312 (6%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA S+ AG HS+A+ G V++ GSN+SGQLG GTT E P + L +
Sbjct: 27 EAGADEGKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVL 86
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AAG+ ++ I G +A+G + GE G T T P V L V A G
Sbjct: 87 V--AAGSSHSLAIRSDGTAWAWGHNGSGELGDGT--TFRRTRPVQVTGLSEAEAV--AAG 140
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ + V+ +G V+ + W +D +LG T P + G V++AAG + LA+
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGG---VKVAAGDGHSLAV 197
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
+ V++ G G+LG G+ P Q+ L VV VAAG+ H+ V
Sbjct: 198 CLDGT---VWAWGRNDSGQLGDGTTVQRSAP-----VQVAGLSGVVAVAAGSSHSLAVRS 249
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V WG G LG G P V L+ + VA G + + V DG V+++G
Sbjct: 250 DGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLS--GGVAVAAGMFHSLAVRSDGTVWAWG 307
Query: 337 CGESASLGHNAI 348
LG ++
Sbjct: 308 QNTRGQLGDGSM 319
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 139/302 (46%), Gaps = 22/302 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+AV G V+++G N SGQLG GTT + P + L G ++ AAG+ ++
Sbjct: 189 AGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSG--VVAVAAGSSHSLA 246
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G++S G+ G +L +P V L V A G F + + +G
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARL--TPVQVTGLSGGVAV--AAGMFHSLAVRSDGT 302
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG + R LG + + P +G E V AAG + +L + G V+
Sbjct: 303 VW--AWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETH--SLVARSDGT-VW 354
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G + G+ G GS P + VAAG HA V DG V WG
Sbjct: 355 AWGNNIEGQRGDGSAKTSTAPVQVTALS----GGFTVAAGKAHALAVRSDGTVWAWGQNL 410
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G + P V L+ + VA GD + + DG V+++G S LG
Sbjct: 411 FGQLGDGTRMQRTAPVQVTGLS--GGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGT 468
Query: 348 IA 349
A
Sbjct: 469 TA 470
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E AG GHS+ V S G V+++G NS GQLG GTT E P + L G ++ AAG
Sbjct: 133 EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSG--GVKVAAG 190
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++ + G V+A+G++ G+ G T ++P V L + V A G+ +
Sbjct: 191 DGHSLAVCLDGTVWAWGRNDSGQLGDGT--TVQRSAPVQVAGLSGVVAV--AAGSSHSLA 246
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ +G V+ + +D +LG T + P + G + V AAG + LA+ +
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLSGGVAV---AAGMFHSLAVRSDGT- 302
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCT 282
V++ G G+LG GS T P Q + L + VAAG H+ V DG V
Sbjct: 303 --VWAWGQNTRGQLGDGSMTASLTP-----VQAIGLSEGEAVAAGETHSLVARSDGTVWA 355
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG G G G+ + + P V AL+ VA G V DG V+++G
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALS--GGFTVAAGKAHALAVRSDGTVWAWG 407
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 32/303 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ + G V+++G N+SGQLG GTT + RP P++ + ++ AAG ++
Sbjct: 439 AGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ--RPAPVQVTELSGVVAVAAGTSHSLA 496
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S G V+A+G ++ G+ G +L +P V L + V A G F + + +G
Sbjct: 497 VSSDGTVWAWGSNASGQLGDGTTRARL--TPVQVAGLSGVVAV--AAGYFHSLAVRSDGT 552
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 223
V+ +WGN++ +LG T N P P+ +P V AAGY + L L +
Sbjct: 553 VW--AWGNNSFFQLGDGT--NTQRPTPV-----RVPGLSGGVAAAAGYFHSLVLRSDGT- 602
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCT 282
V+ G G+LG+G+ P Q+ L V VAAG + + V DG V
Sbjct: 603 --VWGWGNNAYGQLGNGTANASFSP-----VQVTGLSGGVAVAAGDFQSLAVRSDGTVRA 655
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG YG LG G P V L+ + VA G+ + V G ++++G
Sbjct: 656 WGDNIYGQLGDGTVTTRLAPVGVNGLS--GGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQ 713
Query: 343 LGH 345
LGH
Sbjct: 714 LGH 716
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 31/312 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV S G V+++G N GQLG GT + P + L G + AAG ++
Sbjct: 389 AGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLG 446
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G+++ G+ G + P V+ + VV A G + +S +G
Sbjct: 447 LCLDGTVWAWGQNTSGQLGDGTTAQR----PAPVQVTELSGVVAVAAGTSHSLAVSSDGT 502
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++A +LG T + P + G VV +AAGY + LA+ + V+
Sbjct: 503 VW--AWGSNASGQLGDGTTRARLTPVQVAGL---SGVVAVAAGYFHSLAVRSDGT---VW 554
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G +LG G+ T P + V AAG +H+ V+ DG V WGWG
Sbjct: 555 AWGNNSFFQLGDGTNTQRPTPVRVPGLS----GGVAAAAGYFHSLVLRSDGTV--WGWGN 608
Query: 288 --YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG+G P V L+ + VA GD+ + V DG V ++G LG
Sbjct: 609 NAYGQLGNGTANASFSPVQVTGLS--GGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLG- 665
Query: 346 NAIADGQVCSLL 357
DG V + L
Sbjct: 666 ----DGTVTTRL 673
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 20/247 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV+S G V+++GSN+SGQLG GTT P + L G ++ AAG ++
Sbjct: 489 AGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLA 546
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +SF + G + +P V L V AA G F + VL +G
Sbjct: 547 VRSDGTVWAWGNNSFFQLGDGTNTQR--PTPVRVPGLSG--GVAAAAGYFHSLVLRSDGT 602
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ WGN+A +LG+ T P + G + V AAG LA+ + V
Sbjct: 603 VW--GWGNNAYGQLGNGTANASFSPVQVTGLSGGVAV---AAGDFQSLAVRSDGT---VR 654
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G + G+LG G+ T P + + VAAG + V G + WG+
Sbjct: 655 AWGDNIYGQLGDGTVTTRLAPVGVNGLS----GGMAVAAGNGFSLAVHSGGMLHAWGYNT 710
Query: 288 YGCLGHG 294
G LGHG
Sbjct: 711 DGQLGHG 717
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A AG HS+ + S G V+ +G+N+ GQLG+GT + P + L G + AAG ++
Sbjct: 587 AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLSG--GVAVAAGDFQS 644
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ + G V A+G + +G+ G T+L +P V L V A GN F+ +
Sbjct: 645 LAVRSDGTVRAWGDNIYGQLGDGTVTTRL--APVGVNGLSGGMAV--AAGNGFSLAVHSG 700
Query: 168 GRVYTFSWGNDARLGH 183
G ++ + + D +LGH
Sbjct: 701 GMLHAWGYNTDGQLGH 716
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
++A+ S G V+++GSN +GQLG GT + P + L GI+ + G +M +S+ G
Sbjct: 95 TMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGY-HSMALSEDG 153
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK+ GE G T +P V L ++ + A G +F+ L +G V+ +
Sbjct: 154 SVWTWGKNDNGELGNGT--TLQQNTPVQVAGLNDVTAIAA--GGYFSLALKSDGTVWAWG 209
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
D LG T + P + G + V+ IAAG + LA+ + V++ G
Sbjct: 210 VNGDGELGDGTTTDRYVPVQVAGLTD---VMAIAAGGSHSLAVTQDGT---VWAWGKNTY 263
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G LG G+RT+ P Q+ NLQ +V VA G +H+ + + G V +WG LG
Sbjct: 264 GTLGDGTRTNRTRP-----VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGV 318
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+ +P V + V+ I A G + + + +DG V+ +G LG
Sbjct: 319 GSNASSLIPVPVSGIEHVREI--AAGGFHSVAMKKDGTVWGWGFNGGGQLG 367
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 136/297 (45%), Gaps = 19/297 (6%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG H+ ++ S G VYS+G GQLG+GT P + L +I G TM
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLN--HVIDVHTGVRSTM 96
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + G+ G+ + P V L I V +G + + LS +G
Sbjct: 97 ALRSDGTVWTWGSNENGQ--LGIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDG 153
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ ++ LG+ T P + G + V IAAG + LAL + V++
Sbjct: 154 SVWTWGKNDNGELGNGTTLQQNTPVQVAGLND---VTAIAAGGYFSLALKSDGT---VWA 207
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ TD P Q+ L V+ +AAG H+ V QDG V WG
Sbjct: 208 WGVNGDGELGDGTTTDRYVP-----VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNT 262
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG G + P ++ L + A VA G Y + + G+V+S+G LG
Sbjct: 263 YGTLGDGTRTNRTRPVQIKNLQHIVA--VAGGGYHSLALDRTGNVWSWGDNSQRQLG 317
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + TA L G VY++ +G+ +LG+ T P G V+ + G +A
Sbjct: 41 GYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNH---VIDVHTGVRSTMA 97
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVV 274
L + V++ G G+LG G+ TD P Q+ L + +G +H+ +
Sbjct: 98 LRSDGT---VWTWGSNENGQLGIGTVTDMNVPG-----QVSGLSGIKAVSGGLGYHSMAL 149
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+DG V TWG G LG+G ++ P V LNDV AI A G Y + + DG V++
Sbjct: 150 SEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAI--AAGGYFSLALKSDGTVWA 207
Query: 335 FGCGESASLGHNAIAD 350
+G LG D
Sbjct: 208 WGVNGDGELGDGTTTD 223
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AVT G V+++G N+ G LG GT RP I++LQ I+ A G ++
Sbjct: 241 AGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLA 298
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+++G +S + G + L+ P +E ++ I A G F + + ++G
Sbjct: 299 LDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIEHVREI-----AAGGFHSVAMKKDG 353
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
V+ + + +LG T P L+ P
Sbjct: 354 TVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTTP 388
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG +H A + G V +WG+G G LG+G + P + + LN V +H TG +T
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVH--TGVRST 95
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD----GQVCSL 356
+ DG V+++G E+ LG + D GQV L
Sbjct: 96 MALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGL 132
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A+ S G +Y++G NSSGQLG+ + P + + G+ Q +AGA
Sbjct: 52 TQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGAD 111
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTA 162
++ + G YA+G+++ G G V P LV + + + Q G F +
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSV--PLLVSAGAVPSGVTISQVMAGGFHSL 169
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLALA 218
+ G +Y++ + +LG T PL + +P Q++AG + LA+
Sbjct: 170 AVGSNGDIYSWGYNRSGQLGDGTTL--ASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIG 227
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
Y+ G GG+LG GS + P L+ ++ V+AG H+ VG DG
Sbjct: 228 SNGK---TYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ--VSAGDLHSLAVGSDG 282
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ WG G LG+ P +V + + V+ G + + DG+ Y++G
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLN 342
Query: 339 ESASLGHNAIADGQV 353
+ LG+N I V
Sbjct: 343 VNGQLGNNTITTSTV 357
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 15/266 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 102
SQ +AG HS+AV S G +YS+G N SGQLG GTT P + + G+ Q +A
Sbjct: 159 SQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ I G+ YA+G+ G+ G+ +P LV + + Q + G+ +
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQ--LGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSL 276
Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ +G+ Y +WGN+ +LG+ T + + P L+ + + V Q++AG + LA+
Sbjct: 277 AVGSDGKAY--AWGNNDSGQLGNATTTSSLAPV-LVSPMGGLAVTQVSAGADHSLAIGAD 333
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ Y+ G + G+LG+ + T P ++ + + AG H+ D
Sbjct: 334 GN---AYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRI--EAGGLHSLTAASDENT 388
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQ 306
TWG +G LG+G + VP +
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVPVAIS 414
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 102
+Q AG HS+AV S G Y++G N+ G+LG+GT+ P + + G+ I Q A
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMA 163
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIGN 158
G ++ + G +Y++G + G+ GT L +S L S + Q + G+
Sbjct: 164 GGFHSLAVGSNGDIYSWGYNRSGQLG---DGTTLASSVPLKVSAGAVPAGVTFSQVSAGD 220
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ + G+ Y + +LG + P L+ + Q++AG + LA+
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPA-LVSAPAGVSFTQVSAGDLHSLAVG 279
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G A Y+ G G+LG+ + T P L+ L + V +AGA H+ +G DG
Sbjct: 280 SD--GKA-YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQV--SAGADHSLAIGADG 334
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
WG G LG+ +VP +V A + V + G + + D + Y++G
Sbjct: 335 NAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGAN 394
Query: 339 ESASLGHNAIADGQVC 354
LG N +DG +
Sbjct: 395 SFGQLG-NGTSDGSLV 409
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L G+ Q +AG ++ + G +YA+G +S G + G + P LV + +
Sbjct: 46 LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSG--QLGNNSILNSSVPVLVSTPDGVTF 103
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQI 207
Q + G + + +G Y + D RLG+ T PLL + +P + Q+
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTG--SSVPLLVSAGAVPSGVTISQV 161
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAA 266
AG + LA+ +YS G G+LG G+ P + + + V+A
Sbjct: 162 MAGGFHSLAVGSNGD---IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G H+ +G +G+ WG R G LG G+ P +V A V V+ GD + V
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV 278
Query: 327 SEDGDVYSFGCGESASLGH 345
DG Y++G +S LG+
Sbjct: 279 GSDGKAYAWGNNDSGQLGN 297
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 14/301 (4%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
++ G ++ +G G+LG G + P +L IR A G ++ +S GQV
Sbjct: 104 SLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIR--STALGGVHSVALSSLGQV 161
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+ +G FG + V +L+ P++VE N + A TA ++ G +YT WG
Sbjct: 162 FTWGYGGFGALGHSVYHRELL--PRMVEGSWNAKIRHIATAGTHTAAITESGELYT--WG 217
Query: 177 NDAR-----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
D LG + PN+ + ++ +PV A + G +++ G
Sbjct: 218 RDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQ-LWNWGA 276
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
+LG G + P+ I Q +++ + +A+G +H+ + DG+V +WG+G++G L
Sbjct: 277 NSNYELGRGDKVGGWKPQPIPSLQ--DVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQL 334
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
GH + E + +P V++AL D I++A G ++ ++++G +Y +G + + LG + +
Sbjct: 335 GHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPET 394
Query: 352 Q 352
Q
Sbjct: 395 Q 395
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 43/356 (12%)
Query: 35 LAGEACCR--RENSQAIAGP----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP 88
L G C R S +++ P + AVT+ ++ S+G +SGQLG G E P P
Sbjct: 3 LLGHRCASFMRRMSTSVSAPLLWKAENDAVTTVQLL-SWGRGASGQLGGGIEEMRLYPSP 61
Query: 89 IRSLQ-----------------------GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
+ +L G+ + + G + L+ D G+++ +GK G
Sbjct: 62 VATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVD-GKLWIWGKGDGG 120
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+G + + P L +L +I A+G + LS G+V+T+ +G LGH
Sbjct: 121 RLGFGQEYPAFL--PTLNPNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSV 176
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG-GKLGHGSRTD 244
++ P + G+ N + IA + A+ SG +Y+ G G G+LG G
Sbjct: 177 YHRELLPRMVEGSW-NAKIRHIATAGTHTAAIT--ESG-ELYTWGRDQGDGRLGLGPNCG 232
Query: 245 EKHPRLIEQFQLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ + PV VAA G + V+ Q+G++ WG LG G++
Sbjct: 233 PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK 292
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
P+ + +L DV+ I +A+G Y + +++DG V S+G G+ LGH++I + ++ +++
Sbjct: 293 PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVI 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q +G HS+A+T G V S+G GQLGH + E + P I +L +I A G
Sbjct: 306 QIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSS 365
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+ I+D G++Y +G +++ GV G T P VE
Sbjct: 366 SAAITDNGKLYMWGNAK--DSQLGVPGLP-ETQPLPVE 400
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N SG LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V+ IA G + ++A +G VY G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNA 347
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H+
Sbjct: 293 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHT 348
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Query: 175 W--GNDARLGHHT 185
G L HHT
Sbjct: 336 QCRGQSVILPHHT 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + DG V TWG
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N SG LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V+ IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG YG LG G
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNA 347
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H+
Sbjct: 269 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHT 324
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 16/243 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T+ G V+++G N+ QLG+GTT P I + L ++I+ A G+ ++
Sbjct: 83 SGP-HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 141
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 167
+++ G+V+A+G ++ G+ G + + P+ V L+N V+ A G + +
Sbjct: 142 VLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKVVMNIACGQMCSMAVVDT 199
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ---I 254
Query: 227 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+LG G+++++ +P ++E+ +++ + A +A Q G V WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWG 311
Query: 285 WGR 287
R
Sbjct: 312 QCR 314
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 186
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 187 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 244
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 245 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 193 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 253 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 175 W--GNDARLGHHT 185
G L HHT
Sbjct: 312 QCRGQSVILPHHT 324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + DG V TWG
Sbjct: 43 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 13/313 (4%)
Query: 42 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 100
++E+ Q ++ G HS+ + G + S G N GQLG R I SL+ I+
Sbjct: 32 KKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNS--RIEQISSLEAQTIVDV 89
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G ++ + D G +Y++G S G+ G +K T P+ + L N ++Q + GNF
Sbjct: 90 SCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFT-PKRITGLLNRKIIQISCGNFH 148
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ L+ +GRV FSWG + +LG ++ + L+ +L+ IP+VQ+ AG AL+
Sbjct: 149 SVALAEDGRV--FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS 206
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG V++ G G+LG + + + L +L ++ G H AV+ +DG
Sbjct: 207 M--SG-TVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDG 263
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGC 337
V T+G YG LG + SVP+ ++ + + VA G Y T + V + SFG
Sbjct: 264 IVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTLLYVFTCNRIVSFGK 322
Query: 338 GESASLGHNAIAD 350
G G++ +D
Sbjct: 323 GSQRQQGNDESSD 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAA 101
R+ Q G HS+A+ G V+S+G N GQLG G+ + P+ ++SL+GI ++Q
Sbjct: 137 RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVT 196
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG +T +S +G V+A+G+++ G+ + K P V+SL+++ V + G T
Sbjct: 197 AGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHT 256
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
AVL+++G VYTF +LG + P + + V + L C
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCN- 315
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQP 261
+ S G G + G+ +D+ + +L F + +L P
Sbjct: 316 ---RIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVP 353
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A+ S G V+++G SG+LG GT P PI L GI I +AG T+
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
+ G ++ S+G+ +YG GT T+ + ++ I + + G + V+ +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+++ N +LG+ T N+ PH + G L I + ++AG + AL S V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALK---SDGTVWN 258
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 287
GC G+L +G++ D P Q L ++ W ++ + DG WG
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG+G++ + P V +L+ + AI TG T + DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 18/241 (7%)
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
I +AG T+ + + G V+++G + G G T SP V+ L I + A
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGT--TSNSNSPVQVKGLNGITAISAGWA 95
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+F L +G V+T+ G LG T P P+ G + I+AG+ + LAL
Sbjct: 96 HFV--ALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG---ITAISAGWNHTLAL 150
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQ 276
+ ++S G G+LG G+ T+ P + Q + + +++G H+ V+
Sbjct: 151 KADGT---LWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITS-----ISSGGGHSLVIKN 202
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V +WG +G LG+G P + LN + I+V+ G + + DG V+++G
Sbjct: 203 DGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGI--INVSAGVIHSTALKSDGTVWNWG 260
Query: 337 C 337
C
Sbjct: 261 C 261
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 25/285 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ + G ++S+G N GQLG G T P + GI I ++G G +++
Sbjct: 142 AGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSI--SSGGGHSLV 199
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I + G V+++G ++FG+ G +P + L I V A + + L +G
Sbjct: 200 IKNDGTVWSWGCNNFGQLGNGTNSNN--PTPHQISGLNGIINVSAGV--IHSTALKSDGT 255
Query: 170 VYTFSWGNDARLGHHTEPNDVEPH-PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WG + R G N ++ + P+ N ++ I AG+ + A+ S +
Sbjct: 256 VW--NWGCNFR-GELANGNKIDSYIPVQANGLN-GIIAITAGWEFSSAIK---SDGTFWV 308
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG+GS++D P + + + GA + + DG + +G Y
Sbjct: 309 WGVNDYGQLGNGSKSDVTSPMQVSSLSGI----TAIDTGATYTVALKTDGNIFAFGENTY 364
Query: 289 GCLGHGNEECESVPKVVQ-----ALNDVKAIHV--ATGDYTTFVV 326
G LG+G + P++V D A+ + A+GD T V
Sbjct: 365 GQLGNGTTTGSTTPELVSIGDTYVATDKSALSIGYASGDSDTNVT 409
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
+ V+AG + DG V +WG+ + G LG G + P V+ LN + AI +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 322 TTFVVSEDGDVYSFGCGESASLGH 345
+ DG V+++G G S LG
Sbjct: 98 --VALKSDGTVWTWGVGYSGELGD 119
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 145/293 (49%), Gaps = 16/293 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ ++ VT V++ G+N SG LG G + PR I L G +I+ + G G ++
Sbjct: 38 SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVV 97
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
I+ A G+VYA+G + + + G L +P LV + L + V + A G+ T L+ +
Sbjct: 98 IATADGEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLLSKRVTEVACGSHHTIALTTD 155
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VY + + N ++G + N P + L+N VV IA G L ++A +G +Y
Sbjct: 156 GEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-EIY 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ +++ P I Q +N+ V VA G H + +G V WG
Sbjct: 213 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNI--VQVACGYAHTLALTDEGFVYAWGANS 270
Query: 288 YGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG GN+ +++P + + + +V A H + +T+ ++ G V +G
Sbjct: 271 YGQLGTGNKSNQALPTPINTDKERIVEVAACHTS---HTSAAKTQSGQVLMWG 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 25/289 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
GP H + T+ G VY++G N QLG+GTT P + + L R+ + A G+ T+
Sbjct: 93 GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
++ G+VYA+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 152 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 209
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + + + +LG N P + L+ + +VQ+A GY + LAL G VY+
Sbjct: 210 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNIVQVACGYAHTLALT--DEGF-VYA 265
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 284
G G+LG G+++++ P I + +V A H +A Q G+V WG
Sbjct: 266 WGANSYGQLGTGNKSNQALPTPIN-----TDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
R G + +DV A AT T ++S DGD Y
Sbjct: 321 QCR------GQAVASPHLTHFSSTDDVFAC-FATPAVTWHLLSVDGDDY 362
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 104
++ G H+IA+T+ G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 140 TEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 199
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+M + D G++Y +G + G+ G G + +P + +L+ + +VQ A G T L
Sbjct: 200 LCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNIVQVACGYAHTLAL 257
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ EG VY + + +LG + N P P+ E I V++AA + + A SG
Sbjct: 258 TDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERI--VEVAACHTSHTSAAKTQSGQ 315
Query: 225 AVYSVGCG----LGGKLGHGSRTDE 245
+ C L H S TD+
Sbjct: 316 VLMWGQCRGQAVASPHLTHFSSTDD 340
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+++G G LG G PR I+ + + G H + DG V WG
Sbjct: 52 VFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGP-HVVIATADGEVYAWGH 110
Query: 286 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G P +V L + VA G + T ++ DG+VY++G S +G
Sbjct: 111 NGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVG 170
Query: 345 HNAIAD 350
+ A+
Sbjct: 171 SGSTAN 176
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 17/284 (5%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A G H IA+T+ G V+SFG N GQLGHG P+ + +L R A G
Sbjct: 71 ASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALS--RKFVTAVGCSYY 128
Query: 108 MLI---SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
I +D ++Y+ G++ +G+ G K SP L+E+L +V G + + V
Sbjct: 129 HTIFSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQYHSVVS 186
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
S +G +++F + +LG ++ L ++N+ QIA GY + +A+ +
Sbjct: 187 SIDGEIFSFGRNDSGQLGITGSDGNI---SLPKEVKNLKSTQIACGYYHTVAI----NNG 239
Query: 225 AVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+YS G G+LG G + E P L+ + + + V VA G +H +G G++ ++
Sbjct: 240 QLYSWGKNDSGQLGIGIYSAKEILPTLVRDLE--DQEIVSVACGCYHTLALGYAGQLFSF 297
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G +G LG G P ++Q L D K +A G Y + V++
Sbjct: 298 GRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLA 341
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 27/265 (10%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-----------QLV 143
+ +IQ AAG T++++D G VY+ G + G + QG ++ +LV
Sbjct: 1 MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSL--SQGPNAMSQNNNNNNTRTGQLKLV 58
Query: 144 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
E L KNI + A+ G L+ G+V++F + +LGH + + P + L
Sbjct: 59 EKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQ-VEALSR 117
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
V + Y Y +C M +YS G G+LG G+ D+ P LIE LN +
Sbjct: 118 KFVTAVGCSY-YHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEA---LNGKR 172
Query: 262 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATG 319
+V + G +H+ V DG + ++G G LG G++ S+PK V+ L K+ +A G
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL---KSTQIACG 229
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
Y T ++ +G +YS+G +S LG
Sbjct: 230 YYHTVAIN-NGQLYSWGKNDSGQLG 253
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 32/316 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSG-----------QLGHGTTEEEWRPRPIRSLQGI 95
Q AG H++ +T G VYS G N G Q + + + + L+G
Sbjct: 5 QVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGK 64
Query: 96 RIIQ--AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
I++ A+ G + +++ G+V++FG + G+ +G Q + + SP+ VE+L FV
Sbjct: 65 NIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFV-- 120
Query: 154 AAIG-NFFTAVLS--REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
A+G +++ + S E +Y+ + +LG + P L+ L +V I G
Sbjct: 121 TAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSP-TLIEALNGKRIVSIGCG 179
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
+ + + ++S G G+LG GS + P+ ++ NL+ +A G +
Sbjct: 180 QYHSVVSSIDGE---IFSFGRNDSGQLGITGSDGNISLPKEVK-----NLKSTQIACGYY 231
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +G++ +WG G LG G E +P +V+ L D + + VA G Y T +
Sbjct: 232 HTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGY 290
Query: 329 DGDVYSFGCGESASLG 344
G ++SFG LG
Sbjct: 291 AGQLFSFGRNSHGQLG 306
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSW---GNDARLGHHTEPNDVEPH-----------PLL 196
V+Q A GN T +L+ G VY+ + GN G PN + + L+
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQG----PNAMSQNNNNNNTRTGQLKLV 58
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L +V+I A +A +G V+S G + G+LGHG +T P+ +E
Sbjct: 59 EKLRGKNIVKIFASNGCEHVIALTNNG-KVFSFGFNVKGQLGHGDQTSINSPKQVEALS- 116
Query: 257 LNLQPVVVAAGAWHAAVV---GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ V A G + + + + + G YG LG GN + ++ P +++ALN +
Sbjct: 117 ---RKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRI 173
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ + G Y + V S DG+++SFG +S LG +DG +
Sbjct: 174 VSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITG-SDGNI 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAA 102
+++Q G H++A+ + G +YS+G N SGQLG G + +E P +R L+ I+ A
Sbjct: 222 KSTQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVAC 280
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T+ + AGQ+++FG++S G+ G T P L++ L + V Q A G + +
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGT--TNNSCKPLLIQGLIDKKVCQIAAGFYHSI 338
Query: 163 VLSR 166
VL+
Sbjct: 339 VLAN 342
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 106 bits (264), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 14/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G ++ FGSN+ GQLG GT +P +++L+ R+ A G T++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
+ G +YA G ++ E + G+ TS LVE K + A G+ +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y ++ ++G E N + P + +G V ++ GY + + A+Y+
Sbjct: 162 LYMRGDNSEGQIGLGKESNALTPQEVSVGK----RVFWVSCGYYHSAFVTVDG---ALYT 214
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLG + H ++ +Q + + V VA G H + ++ V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272
Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG ES +P+VV+ + H A G+ T +++++G +Y+FG G LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 32/258 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW---------RPRPIRSLQGIRIIQAA 101
G H++ TS+G +Y+ G N+ GQLG G + + PI+ L A
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML--------A 147
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG+ + ++ G++Y G +S G+ G + L +PQ V K +F V + G + +
Sbjct: 148 AGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHS 203
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALAC 219
A ++ +G +YTF + +LG TE + H + + +IP VVQ+A G + +AL
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVAL-- 259
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ VYS G G G+LGHG+ E PR++E F+ ++ A G H A++ +G
Sbjct: 260 --TENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDNG 315
Query: 279 RVCTWGWGRYGCLGHGNE 296
+ T+G GR+G LG G E
Sbjct: 316 LLYTFGDGRHGKLGLGEE 333
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 23/290 (7%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ G V++FG + + + W L+ ++ + G T L+++ G+++
Sbjct: 9 IPESGAVFTFGKS---KFADNAPSKFW-------LKNDVPLRISCGDEHTALVTENGKLF 58
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
FG +++G+ G + T V P V++L++ V A G T V + G +Y N
Sbjct: 59 MFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+ +LG + H + + P+ +AAG AL +Y G G++
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT---QDGRLYMRGDNSEGQI 173
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G ++ P+ + + + V+ G +H+A V DG + T+G G LG E+
Sbjct: 174 GLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEK 229
Query: 298 CESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ KV Q + D+ + + VA G T ++E+ +VYSFG G+ LGH
Sbjct: 230 LAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGH 277
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S A+T G +Y G NS GQ+G G P+ + G R+ + G +
Sbjct: 148 AGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ G +Y FG+ G + G+ KL PQ V + + VVQ A G T L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT-E 261
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY+F G +LGH T + L +E+ ++ C A +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318
Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+ G G GKLG G T++ P L +F L+ V G H V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G GH++A+T + VYSFG GQLGHGT E R PR + + R+ AA G
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G + P L + V G VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Query: 166 R 166
+
Sbjct: 367 K 367
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+++ G ++++G S +G LG+ T W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHS 375
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ G++Y FG FG +G + + P+ VE+L V+ A G + +A +
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRES--AAYPKEVEALNGFRTVKVACGVWHSAAIVEA 433
Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++YT+ G+ RLG + + P L LE+ Q+ G +AL
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH-NFHQLGCGQNMTVAL 492
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A SG VY++G G+LG+ ++D KHP L++ +L N ++ GA H AV+
Sbjct: 493 AT--SGH-VYTMGSSDNGQLGN-PKSDGKHPCLVKD-KLANELVEEISCGAAHVAVLTSR 547
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 548 SEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCI 596
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 24/281 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q G+ L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVES 304
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L V + G F T +S G + F+WG+ + LG+ T + P + G LE
Sbjct: 305 LSVTIVDFISCGEFHTCAISASGDL--FNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEG 362
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + + S +Y+ G G G LGHG+R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHSALIT---STGRLYTFGDGKFGALGHGNRESAAYPKEVE--ALNGFRT 417
Query: 262 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
V VA G WH+A + + ++ TWG G LG G++E +P +QAL +
Sbjct: 418 VKVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH 477
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ G T ++ G VY+ G ++ LG N +DG+
Sbjct: 478 NFHQLGCGQNMTVALATSGHVYTMGSSDNGQLG-NPKSDGK 517
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS +TS G +Y+FG G LGHG E P+ + +L G R ++ A G + I
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAI 430
Query: 111 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+A ++Y +G G + +L+ P +++L Q G
Sbjct: 431 VEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLI--PTCLQALLEHNFHQLGCGQNM 488
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALA 218
T L+ G VYT ++ +LG+ P HP L L N V +I+ G ++ L
Sbjct: 489 TVALATSGHVYTMGSSDNGQLGN---PKSDGKHPCLVKDKLANELVEEISCGAAHVAVLT 545
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAV 273
S VY+ G G G+LGHG D+K P ++E + +++ + + H V
Sbjct: 546 ---SRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICIHRWV 602
Query: 274 VGQDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
G D VCT + R+ C G C S KV++A
Sbjct: 603 SGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 645
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T G VY++G++ + L G T +W P+ + L GI I A G T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
++S G+++ +G +FG +G + +SP+ VESL + V AA G++ TA +
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEV 481
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
S G+++T+ G++ RLGH N + P + L + VQ++ G +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVP-TRVTQLVDYDFVQVSCGRMLTVA 540
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G G+LG+ D+ +I + QL V++ G++H AV+
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVKVISTGSYHVAVLTS 594
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G V TWG G G LG G+ E P V+AL D + + G T +
Sbjct: 595 AGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAI 644
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L++ G+V+ +G+ +G G + ++SP++V+S
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGR--LGQKIDMDISSPKIVDS 352
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L + V A G + T L+ G VYT WGND L + P L G L+
Sbjct: 353 LNGLHVKTVACGEYHTCALTDSGEVYT--WGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I + +A G + ++ S +++ G G G LGHG P+ +E L ++
Sbjct: 411 ISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRS 467
Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
A G+WH A + + G++ TWG G G LGH + + VP V L D
Sbjct: 468 A--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVD 525
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ V+ G T ++ G V++ G + LG+ D V
Sbjct: 526 YDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV 568
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 23/253 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G H+ V+S G ++++G + G LGHG P+ + SL G+R+ AA G+
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSW 473
Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
T I S +G+++ +G G + G K+V P V L + VQ
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV--PTRVTQLVDYDFVQV 531
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G T L+ G+V+ +LG+ + V + G L+ V I+ G ++
Sbjct: 532 SCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV--IVEGQLKQEFVKVISTGSYHV 589
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGAW 269
L S +VY+ G G G+LG G D P +E Q + P AA
Sbjct: 590 AVLT---SAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICL 646
Query: 270 HAAVVGQDGRVCT 282
H + D C+
Sbjct: 647 HKPISISDQSTCS 659
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 155/334 (46%), Gaps = 44/334 (13%)
Query: 45 NSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
NS+ ++ G +AV + G +Y +G+NS GQLG G + PR +++L G + A
Sbjct: 14 NSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACS 73
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------------------------VT 138
T+ D G YA+G G G+ G + V
Sbjct: 74 QEHTVCCLDDGSAYAWGCALNG--RLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVC 131
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVL----SREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
+P+++ESL F+ A G + +A L ++T G + RLGH E + P
Sbjct: 132 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPT- 190
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQ 253
+ LEN+ + IA G + AC S +Y+ G GKLG GS R + P+ +
Sbjct: 191 AVHALENVNITAIACGAHH---TACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSG 247
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALNDV 311
L N V VA G+ H+A V DG + TWG GR LGH E E +P+ V+AL +
Sbjct: 248 -PLRNKAVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEILPRRVEALLGL 304
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
IHV GD T + E+G+V+++G S LGH
Sbjct: 305 FVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 336
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR + +L+ I + +AG + +++ +G++Y +G +S E + G + + P+LV++
Sbjct: 4 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPRLVKA 61
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-------------TEPNDVEP 192
L V A T +G Y + + RLG H + P
Sbjct: 62 LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARP 121
Query: 193 HPLLGTLE--NIPVVQIAAGYCYLLALACQP-----------SGMAVYSVGCGLGGKLGH 239
PL V++ GY ++ +AC P ++++ G GL G+LGH
Sbjct: 122 EPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGH 180
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-C 298
G D P + + +N+ +A GA H A V G + TWG +G LG G+
Sbjct: 181 GDEEDRHLPTAVHALENVNI--TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGS 238
Query: 299 ESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
+ +PK V L + + VA G + V+ DG++Y++G G LGH
Sbjct: 239 QLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHE 285
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 7 IFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS----IAVTSKG 62
+F P T A + L C VL E+ C + GP HS I +
Sbjct: 112 VFSPATGARPEPLASACAVCTPRVL------ESLCGYFIADVACGPYHSAFLGIYEQDRT 165
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+++ G +G+LGHG E+ P + +L+ + I A GA T ++ AG +Y +G
Sbjct: 166 SLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGA 225
Query: 123 SFGEAEYG-VQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+FG+ G +G++L+ P+ V L+N VV A+G+ +A ++ +G +YT WG R
Sbjct: 226 AFGKLGLGSTRGSQLL--PKHVSGPLRNKAVVSVALGSQHSACVTTDGELYT--WGQGRR 281
Query: 181 LGHHT--EPNDVEPH 193
LGH E +++ P
Sbjct: 282 LGHEVQGESDEILPR 296
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
+ SP+LV++LKNI + + G AV++ G +Y + ++ +LG + P L+
Sbjct: 1 MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPR-LV 59
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------ 238
L V +A C C + Y+ GC L G+LG
Sbjct: 60 KALHGKVVKAVA---CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 116
Query: 239 HGSRTDEK-------HPRLIEQFQLLNLQPVVVAAGAWHAAVVG---QD-GRVCTWGWGR 287
G+R + PR++E L VA G +H+A +G QD + T G G
Sbjct: 117 TGARPEPLASACAVCTPRVLES--LCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 174
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG+EE +P V AL +V +A G + T V+ G +Y++G LG
Sbjct: 175 NGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLG 231
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 25/252 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLI----SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
PR + SL G I A G + + D ++ G G +G + + + P
Sbjct: 133 PRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHL--PT 190
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG-HHTEPNDVEPHPLLGT 198
V +L+N+ + A G TA ++ G +YT WG A +LG T + + P + G
Sbjct: 191 AVHALENVNITAIACGAHHTACVTSAGTLYT--WGGAAFGKLGLGSTRGSQLLPKHVSGP 248
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQL 256
L N VV +A G + AC + +Y+ G G +LGH +DE PR +E L
Sbjct: 249 LRNKAVVSVALGSQHS---ACVTTDGELYTWGQGR--RLGHEVQGESDEILPRRVEA--L 301
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIH 315
L L + V G H A + ++G V W WG LGHG+ E + P ++ALN +
Sbjct: 302 LGLFVIHVVCGDAHTACIVENGNV--WAWGTSRILGHGDPEVPPNRPACLRALNGKGVVQ 359
Query: 316 VATGDYTTFVVS 327
++ +TF V+
Sbjct: 360 LSCA--STFTVA 369
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
PRL++ + +N + V+AG AVV G + WG G LG G+ SVP++V+A
Sbjct: 4 PRLVDALKNINSE--RVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKA 61
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
L+ VA T +DG Y++GC + LG + ++
Sbjct: 62 LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLS 103
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 15/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRK--KPEHVVALDAQIIVAVSGGESHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQ++++G S G+ G+ + V P+ ++ L ++ + Q A G + LS+ G+
Sbjct: 100 NDKGQIFSWGLGSDGQL--GLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQ 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V FSWG + +LG + + ++ +L+ IP Q++AG + A+ SG AV+
Sbjct: 158 V--FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL--SG-AVF 212
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG D P L++ L + + + V+ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDTNDRWFPALLKS--LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L ++ G +T G +YSFG G + LG
Sbjct: 271 YGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 10/206 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q G HS A++ G V+S+G N GQLG HG++ P+ I+SLQGI Q +A
Sbjct: 140 AQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFAQLSA 197
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G + I+ +G V+ +G++ FG+ G+ T P L++SL++ V+ + G TA
Sbjct: 198 GGAHSFAITLSGAVFGWGRNKFGQL--GLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTA 255
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L++EG V+TF G +LGH++ +++ P + + NI V QI+ G + LA PS
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNI-VTQISCGRQHTLAFT--PS 312
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG S + K P
Sbjct: 313 SGKMYSFGLGGNGQLGTRSTCNRKSP 338
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 138/286 (48%), Gaps = 16/286 (5%)
Query: 67 FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR G ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+++++ G+D +LG +
Sbjct: 64 GQLGH----EKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLN 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGS 241
V + L ++ + Q+A GY + AL+ G V+S G G+LG HGS
Sbjct: 120 NFEECVRVPRNIKCLSDVQIAQVACGYRHSHALS---KGGQVFSWGQNQFGQLGLGMHGS 176
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P++I+ Q + ++AG H+ + G V WG ++G LG +
Sbjct: 177 SIST--PQIIQSLQ--GIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWF 232
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
P ++++L + I+V+ G+ T ++++G V++FG G LGHN+
Sbjct: 233 PALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A+T G V+ +G N GQLG T + W P ++SL+ R+I + G
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q + G T A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFT 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G++Y+F G + +LG + N P P+ G
Sbjct: 311 PSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKG 343
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S+G+ G ++V P+ E V G T L +G VYT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH +P H + L+ +V ++ G + LAL + ++S G G G+LG
Sbjct: 64 GQLGHE-KPRKKPEHVV--ALDAQIIVAVSGGESHTLALNDKGQ---IFSWGLGSDGQLG 117
Query: 239 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 296
+ + + PR I+ L ++Q VA G H+ + + G+V +WG ++G LG G
Sbjct: 118 LNNFEECVRVPRNIKC--LSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHG 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
S P+++Q+L + ++ G +F ++ G V+ +G + LG N D +L
Sbjct: 176 SSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPAL 235
Query: 357 L 357
L
Sbjct: 236 L 236
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 15/292 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+Y++G ++G LGHG +E P + +L G I + A GA T+ +S G+V+++G
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGY 268
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---SREGRVYTFSWGNDAR 180
G G + +P + L+++ + Q A F +A + S++G +++F + +
Sbjct: 269 GGRLGQGHLRDRF--TPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQ 326
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
LG + + +L + ++A G + ALA S ++ GC G+LG+G
Sbjct: 327 LGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGS---LWLWGCNESGQLGNG 383
Query: 241 SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEEC 298
+ T P L+E L V+ VA G H+A + + GR+ G YG LG H N+
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443
Query: 299 E-----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +V V+ D + +HVA GD T VV++ G+++++G G+ LGH
Sbjct: 444 DDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGH 495
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA ++ + G H++A++ G V+S+GS G+LG G + + P I L+ + +
Sbjct: 235 EALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNL 294
Query: 98 IQAAAGAGRTMLI---SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 153
Q A + + S G +++FG++ +G + G+ KL+TS Q V SL + +
Sbjct: 295 TQVACNEFHSAAVCACSKQGALFSFGENDYG--QLGIPEDKLLTSYIQCVSSLSEHKISR 352
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG--TLENIPVVQIAAGY 211
A G+F +A L+ G ++ + +LG+ + P L L + V+++A G
Sbjct: 353 VACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGD 412
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL---LNLQPVVVAAG 267
+ A + M + G G+LG H + + H ++ + + V VA G
Sbjct: 413 QH-SAFITKKGRM--FCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 469
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
H AVV G + TWG G+ G LGHG+ +P ++
Sbjct: 470 DSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIE 508
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+YT+ G + LGH + + PH ++ L + ++A G + LAL+ V+S
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPH-VVEALLGKDIRKVACGATHTLALS---KDGEVFSW 264
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---GQDGRVCTWGWG 286
G G GG+LG G D P I + LNL V A +H+A V + G + ++G
Sbjct: 265 GSGYGGRLGQGHLRDRFTPIRICGLESLNLTQV--ACNEFHSAAVCACSKQGALFSFGEN 322
Query: 287 RYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG ++ S + V +L++ K VA G + + ++E G ++ +GC ES LG+
Sbjct: 323 DYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGN 382
Query: 346 NAIADGQVCSLL 357
+ SLL
Sbjct: 383 GNYTSTSLPSLL 394
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
KL+ ++ + + S+ G HS A+ G ++ +G N SGQLG+G P
Sbjct: 333 KLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPS 392
Query: 88 PIRSLQGIR---IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQL 142
+ + +R +++ A G + I+ G+++ G +++G+ A VT
Sbjct: 393 LLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVA 452
Query: 143 VESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
V + V A G+ TAV++ G ++T+ G RLGH N P + +E
Sbjct: 453 VRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGME 512
Query: 201 NIPVVQIAAG 210
V ++ G
Sbjct: 513 GKHVRGVSCG 522
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
TWG G G LGHG + E+ P VV+AL VA G T +S+DG+V+S+G G
Sbjct: 211 TWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGG 270
Query: 342 SLGHNAIADG----QVCSLLFLSIFQ 363
LG + D ++C L L++ Q
Sbjct: 271 RLGQGHLRDRFTPIRICGLESLNLTQ 296
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 143/294 (48%), Gaps = 16/294 (5%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-GQVY 117
T V+ G+N SG LG G + PR I SL G +I + G+G ++++ A G+VY
Sbjct: 232 TENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVY 291
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G L+ + +L N VV+ A G+ + VL+ +G VY + + N
Sbjct: 292 TWGHNAYSQLGNGTTNHGLIPC-HVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNN 350
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + L+N IA G + ++A SG VY G G+L
Sbjct: 351 SGQVGSGSTANQPIPRRVTSCLQNKIATNIACG--QMCSMAVVESG-EVYVWGYNGNGQL 407
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P I Q + +Q V G H V+ +G++ WG YG LG GN+
Sbjct: 408 GLGSSGNQPTPCRIAALQGIRVQR--VTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKS 465
Query: 298 CESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 466 NQSYPIPVPVEKDRIIEIAACHSA---HTSAAKTQSGHVYMWGQCRGQSVTLPH 516
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 16/243 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T++G VY++G N+ QLG+GTT P + + L ++++ A G+ ++
Sbjct: 277 SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSL 335
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+VYA+G ++ G+ G + + P+ V S L+N A G + +
Sbjct: 336 VLTSDGEVYAWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIATNIACGQMCSMAVVES 393
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++ GY + L L + +
Sbjct: 394 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQ---L 448
Query: 227 YSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
Y+ G G+LG G+++++ + P +E+ +++ + A +A Q G V WG
Sbjct: 449 YAWGANSYGQLGTGNKSNQSYPIPVPVEKDRIIE---IAACHSAHTSAAKTQSGHVYMWG 505
Query: 285 WGR 287
R
Sbjct: 506 QCR 508
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ A G
Sbjct: 326 EVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQM 385
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + ++G+VY +G + G+ G G + +P + +L+ I V + G T VL+
Sbjct: 386 CSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVTCGYAHTLVLT 443
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
EG++Y + + +LG + N P P+ +E +++IAA
Sbjct: 444 DEGQLYAWGANSYGQLGTGNKSNQSYPIPV--PVEKDRIIEIAA 485
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 39 ACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
+C + + + IA G S+AV G VY +G N +GQLG G++ + P I +LQGIR+
Sbjct: 370 SCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRV 429
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ G T++++D GQ+YA+G +S+G+ G + + P VE I + A
Sbjct: 430 QRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVEK-DRIIEIAACHS 488
Query: 158 NFFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 489 AHTSAAKTQSGHVYM--WG 505
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G + PR I+ + + +G H V +G V TWG
Sbjct: 237 VFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGP-HVVVATAEGEVYTWGH 295
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G +P V L + K + VA G + + V++ DG+VY++G S +G
Sbjct: 296 NAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVG 355
Query: 345 HNAIADGQV 353
+ A+ +
Sbjct: 356 SGSTANQPI 364
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 18/282 (6%)
Query: 30 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
+++ L +A RR G HS+A+TS G VYS+GS G+LGHG + PR I
Sbjct: 283 LVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKI 342
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LK 147
+L RI + G T ++SD V+ FG+ G G+ TK +PQ V + +
Sbjct: 343 MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNG--RLGLGDTKCHDTPQEVPTWGFR 400
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIP 203
+++ G FT LS EGRV FSWG + LG + +++ P + L+N
Sbjct: 401 KQRIIKVVCGWNFTIALSLEGRV--FSWGKQSEGQCGLG-FCDQDELSPCLIEKLLDN-R 456
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQP 261
+V +A GY + LAL Q V S G G G+LG G + P I+Q F P
Sbjct: 457 IVDVACGYTHSLALTSQ---HEVLSWGLGEYGQLGRGI-VYQPSPESIDQSLFACEGGHP 512
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ GA+H+ + + WG YG G G+ +P+
Sbjct: 513 QRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G T + +PQ V+ L + + A G LS G VY+ D + TEP +
Sbjct: 221 GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS---SEDHAIST-TEPTN 276
Query: 190 VEPHPLL-------GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ P L L P++ IA G + +AL S VYS G G G+LGHG
Sbjct: 277 MLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALT---SAGEVYSWGSGEDGRLGHGEM 333
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
D PR I LL + V+ G H AVV V T+G GR G LG G+ +C P
Sbjct: 334 RDRNVPRKI--MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP 391
Query: 303 KVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ V + I V G T +S +G V+S+G
Sbjct: 392 QEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWG 427
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 248 PRLIEQFQL---LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
P+L+++ L L+ +P++ +A GA H+ + G V +WG G G LGHG +VP+
Sbjct: 281 PQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPR 340
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ AL + +V+ G T VVS+ V++FG G + LG
Sbjct: 341 KIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLG 381
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 27/351 (7%)
Query: 16 RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
++L CG S K V L+ L G+ + C E Q I + +
Sbjct: 2 EEELPLFCGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYT 61
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+V+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF 121
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + G L+N VV IA G + +A SG VY G G+L
Sbjct: 181 SGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSG-EVYVWGYNGNGQL 237
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 296 NQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 154/301 (51%), Gaps = 24/301 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AG H++A+ G V+S+G NS GQLG GT + RP+ I ++ + I A G
Sbjct: 1040 AGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI--ACGGSH 1097
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ ++ G ++++G + +G+ G +K T+PQ V ++ N+ + A G +++ L+R
Sbjct: 1098 SLAVARDGSLWSWGYNYYGQLGLGDNYSK--TTPQKVNAISNVAAI--AAGEYYSLALTR 1153
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+++ +D +LG + P + L N V IAAG + LAL S V
Sbjct: 1154 DGSVWSWGDNSDGQLGLGDNEDRNTPQKVE-VLSN--VAAIAAGEDHSLALTRDGS---V 1207
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+S G G+LG D P+ + + +AAG H+ + ++G WG+
Sbjct: 1208 WSWGRNSRGQLGLDDNDDRNTPQPVTTISNIK----AIAAGNSHSFAISEEGLAWAWGYN 1263
Query: 287 RYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G LG G+ E+ P+ V+ +++V + ++ G+Y + ++EDG ++++G + +
Sbjct: 1264 YDGQLGIGTSGSLANENTPQKVKVISNV--VGLSGGNYHSLALTEDGALWAWGDNDDGQI 1321
Query: 344 G 344
G
Sbjct: 1322 G 1322
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 22/316 (6%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRII 98
C N AG G S+A+ + G V+S+G+N SGQLG G E + + P + +L I
Sbjct: 490 CGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASI 549
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIG 157
AAG G + ++ G V+++G++S G+ G GT PQ + ++ N+ + A G
Sbjct: 550 --AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAI--ACG 605
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ L+R+G +++ + +LG + P + L N VV +AAG + LAL
Sbjct: 606 GSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV-NALSN--VVAMAAGDRHSLAL 662
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
S ++S G G+LG G PR + + V +AAG H+ + +D
Sbjct: 663 TLDGS---LWSWGDNTYGQLGLGDNDHRNTPRKVNAISNV----VAIAAGYRHSLALTRD 715
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V +WG G LG G+ + + P+ V ++++KAI A G+ + +SE+G V+++G
Sbjct: 716 GSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISEEGLVWAWGY 773
Query: 338 GESASLG---HNAIAD 350
S LG H ++AD
Sbjct: 774 NCSGQLGIGTHGSLAD 789
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 19/307 (6%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQGIRII 98
C N AG S+A+ + G ++S+G N +GQLG G + + P + +L I
Sbjct: 979 CGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKI 1038
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIG 157
AAG + ++ G V+++G +S G+ G GT PQ + ++ N+ + A G
Sbjct: 1039 --AAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI--ACG 1094
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ ++R+G ++++ + +LG + P + + N V IAAG Y LAL
Sbjct: 1095 GSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV-NAISN--VAAIAAGEYYSLAL 1151
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
S V+S G G+LG G D P+ +E + +AAG H+ + +D
Sbjct: 1152 TRDGS---VWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNV----AAIAAGEDHSLALTRD 1204
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V +WG G LG + + + P+ V ++++KAI A G+ +F +SE+G +++G
Sbjct: 1205 GSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLAWAWGY 1262
Query: 338 GESASLG 344
LG
Sbjct: 1263 NYDGQLG 1269
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 22/292 (7%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+ S G ++++G N GQLG G + P L + I A G + + +G
Sbjct: 129 SLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAI--AGGDYHALAATQSG 186
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+A G++ G + G G +P V L N+ V A G FF+ L +G V+ +
Sbjct: 187 EVWAMGRNDHG--QLGFTGDH-ADAPVQVAGLSNVKSV--AAGEFFSLALKNDGTVW--A 239
Query: 175 WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
WGN+ A+LG V + L NI IAAG + +ALA S V++ G
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGS---VWAWGAN 294
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G K P + + +A+G +H+ + DG + WG G LG
Sbjct: 295 GSGQLGFGDFETPKAPGRVSSLADV----TAIASGWFHSLALTSDGVLWAWGNNGDGRLG 350
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+S+P V +++ A+ A G + ++ DG V+S+G LG
Sbjct: 351 TDATSDQSLPAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
N AIA G HS+A+ G +S+G N GQLG G + PR + +L ++ AAG
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAG 655
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ G ++++G +++G+ G+ +P+ V ++ N+ + A G +
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQ--LGLGDNDHRNTPRKVNAISNVVAI--AAGYRHSLA 711
Query: 164 LSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
L+R+G V+ SWGN+ R LG + + N P P+ T+ NI + + Y ++A
Sbjct: 712 LTRDGSVW--SWGNNTRGQLGLGDNDDRN--TPQPVT-TISNIKAIAVGNNY----SIAI 762
Query: 220 QPSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
G+ V++ G G+LG HGS DE P+ + ++ V ++AG+ H+ + +
Sbjct: 763 SEEGL-VWAWGYNCSGQLGIGTHGSLADENTPQKV----IVISNVVGLSAGSSHSIALTE 817
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
DG + WG G + E E + VQ + H+
Sbjct: 818 DGALWAWGNNEAGQIA-AEEAIEYIDNPVQVFQSGEVFHL 856
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 24/269 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
N AIA G HS+AV G ++S+G N GQLG G + P+ + ++ + I AAG
Sbjct: 1087 NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAI--AAG 1144
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ G V+++G +S G+ G+ + +PQ VE L N+ + A G +
Sbjct: 1145 EYYSLALTRDGSVWSWGDNSDGQ--LGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200
Query: 164 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+R+G V+ SWG ++R LG + P P+ T+ NI IAAG + A++ +
Sbjct: 1201 LTRDGSVW--SWGRNSRGQLGLDDNDDRNTPQPVT-TISNIKA--IAAGNSHSFAISEE- 1254
Query: 222 SGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
G+A ++ G G+LG GS +E P+ ++ + V ++ G +H+ + +DG
Sbjct: 1255 -GLA-WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV----VGLSGGNYHSLALTEDG 1308
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQA 307
+ WG G +G + ++ +V Q+
Sbjct: 1309 ALWAWGDNDDGQIGSTGGDRKNPVQVFQS 1337
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 24/300 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGRTMLIS 111
HS+A+ G V+ +G N QLG G P P+ S I+ AAG ++ ++
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRLFSLALA 133
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G ++A+G + +G+ G +L +P L ++ + A G++ ++ G V+
Sbjct: 134 SDGSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDVAAI--AGGDYHALAATQSGEVW 189
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ +LG + D P + G L N V +AAG + LAL + V++ G
Sbjct: 190 AMGRNDHGQLGFTGDHADA-PVQVAG-LSN--VKSVAAGEFFSLALKNDGT---VWAWGN 242
Query: 232 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
+LG G + P I + +AAG HA + +DG V WG G
Sbjct: 243 NESAQLGTGIAGEAVATPAPIAVLSNI----TAIAAGRRHAMALAEDGSVWAWGANGSGQ 298
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LG G+ E P V +L DV AI A+G + + ++ DG ++++G LG +A +D
Sbjct: 299 LGFGDFETPKAPGRVSSLADVTAI--ASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSD 356
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 17/223 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+T G V+S+G NS GQLG G E+ P+ + L + I AAG ++
Sbjct: 1143 AGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G V+++G++S G + G+ +PQ V ++ NI + A GN + +S EG
Sbjct: 1201 LTRDGSVWSWGRNSRG--QLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGL 1256
Query: 170 VYTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+ + + D +LG T N+ P + + N VV ++ G + LAL A+
Sbjct: 1257 AWAWGYNYDGQLGIGTSGSLANENTPQKVK-VISN--VVGLSGGNYHSLALT---EDGAL 1310
Query: 227 YSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGA 268
++ G G++G + D K+P ++ + ++ +L V A GA
Sbjct: 1311 WAWGDNDDGQIGS-TGGDRKNPVQVFQSSEVFHLYLDVDADGA 1352
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIAG H++A T G V++ G N GQLG T + P + L ++ + AAG
Sbjct: 171 AIAGGDYHALAATQSGEVWAMGRNDHGQLGF-TGDHADAPVQVAGLSNVKSV--AAGEFF 227
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + + G V+A+G + + G+ G + V +P + L NI + A G L+
Sbjct: 228 SLALKNDGTVWAWGNNESAQLGTGIAG-EAVATPAPIAVLSNITAI--AAGRRHAMALAE 284
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMA 225
+G V+ + +LG D E G + ++ V IA+G+ + LAL S
Sbjct: 285 DGSVWAWGANGSGQLGF----GDFETPKAPGRVSSLADVTAIASGWFHSLALT---SDGV 337
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+++ G G+LG + +D+ P + V A G H+ + DG V +WG
Sbjct: 338 LWAWGNNGDGRLGTDATSDQSLPAQVSSIS----NAVSFAGGQRHSLAIAADGSVWSWGG 393
Query: 286 GRYGCLG 292
YG LG
Sbjct: 394 NAYGQLG 400
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 32/311 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH ++ E P +++L+ ++I+QAA G
Sbjct: 46 VAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHC 105
Query: 108 MLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAIGNF 159
+ + D GQ YA+G + +G E E G+K+ + PQ + V Q A G
Sbjct: 106 LAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQ--RCAPQLRVRQVAAGGT 163
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLL 215
+ VL+ G V+T+ G P D++ P + G LEN+ + IA G + L
Sbjct: 164 HSVVLTHNGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVQL--IAVGAFHNL 212
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
AL + V++ G G+LG G P ++ L L +AAG WH+ +
Sbjct: 213 ALLEEGE---VWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLIL--ADIAAGGWHSTALT 267
Query: 276 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
D V WG G +G LG G+++ VP+ V L V+ G + + DG ++S
Sbjct: 268 TDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFS 327
Query: 335 FGCGESASLGH 345
+G + LG+
Sbjct: 328 YGRADHGRLGY 338
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 25/298 (8%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQ 115
+ S V ++GS GQLG G E++ I++L G R++ AG+ ++ I + GQ
Sbjct: 1 MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
++ +G + G + + +K ++P V++L+N+ +VQAAIG + + +G+ Y +W
Sbjct: 61 LFTWGWNQRGTLGHPPE-SKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAY--AW 117
Query: 176 GNDARLGHHTEPNDVEP-HPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAV 226
G + EP E +L IP V Q+AAG + + L V
Sbjct: 118 GGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLT---HNGHV 174
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
++ G G P ++ + + L +A GA+H + ++G V WG
Sbjct: 175 WT----WGQPWPPGDIKQISTPVRVQGLENVQL----IAVGAFHNLALLEEGEVWAWGNN 226
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG G+ + S P VQ L+ + +A G + + ++ D +VY++G GE LG
Sbjct: 227 EYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLG 284
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN Q IA G H++A+ +G V+++G+N GQLG G T+ +P P++ L G+ + AA
Sbjct: 199 ENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAA 258
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G + ++ +VYA+G+ G +G + +K+V PQ V L + Q + G +
Sbjct: 259 GGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMV--PQKVHLLAGETIAQVSCGGTHS 316
Query: 162 AVLSREGRVYTFSWGNDARLGH 183
+ +GR++++ + RLG+
Sbjct: 317 VARTADGRIFSYGRADHGRLGY 338
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
AG HS A+T+ VY++G G+LG G + + P+ + L G I Q + G ++
Sbjct: 258 AGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSV 317
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN---FFTAVLS 165
+ G+++++G+ G YG + VT+ +E I + A N +F +++
Sbjct: 318 ARTADGRIFSYGRADHGRLGYG----RKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVA 373
Query: 166 REGR--VYTFSW 175
GR + T SW
Sbjct: 374 CGGRHTLATASW 385
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYS 334
D V WG G G LG GN E + +QAL + + + V G + + EDG +++
Sbjct: 4 DHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFT 63
Query: 335 FGCGESASLGH 345
+G + +LGH
Sbjct: 64 WGWNQRGTLGH 74
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHS--IAVTSKGVVYSFGSNSSGQLGHGTTEE 82
G W + F L EA + + G + + T ++ G+N G LG G +
Sbjct: 5 GKWPI---FSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQS 61
Query: 83 EWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
PR + SL G +I + G+G +L + G+V+ +G +++ + G LV
Sbjct: 62 TIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPY-H 120
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+ +L N V++ A G++ + VL+ +G V+ + + N ++G + N P + G L+N
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN 180
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
VV IA G + ++A +G V+ G G+LG GS ++ P + Q + +Q
Sbjct: 181 KVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR 237
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVA 317
V A G H V+ +G+V WG YG LG GN+ +S P V D + A H A
Sbjct: 238 V--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA 295
Query: 318 TGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+T+ ++ G VY +G C G+S +L H
Sbjct: 296 ---HTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGP-HIVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 146/300 (48%), Gaps = 19/300 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ + G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQV+++G S G+ G+ + + P+ ++SL ++ V Q A G + + LS+ G
Sbjct: 100 NDKGQVFSWGLGSDGQ--LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGH 157
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ FSWG + LG + V H L +L+ IP QIAAG + AL SG A
Sbjct: 158 I--FSWGQNRYGQLGLGMTGQSISVPQH--LQSLQGIPFAQIAAGGAHSFALTL--SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G G+LG D P L++ L + + + ++ G H A + ++G V T+G
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRCFPALLKA--LRSQRVIYISCGEDHTAALTKEGGVFTFGA 268
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
G YG LGH + E P+ V L +A G +T G + SFG G + LG
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 104
+Q G HS+A++ G ++S+G N GQLG G T + P+ ++SLQGI Q AAG
Sbjct: 140 AQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGG 199
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++ +G V+ +G++ FG+ G+ T P L+++L++ V+ + G TA L
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQ--LGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++EG V+TF G +LGH++ ++V P + + N+ V QIA G + LA PS
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV-VTQIACGRQHTLAFT--PSSG 314
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHP 248
+ S G G G+LG S + K P
Sbjct: 315 KMDSFGLGGNGQLGTRSTCNRKSP 338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 12/284 (4%)
Query: 67 FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR G R+ G T + + G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+V+++ G+D +LG +
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ + +L ++ V Q+A GY + LAL+ G ++S G G+LG G
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALS---KGGHIFSWGQNRYGQLGLG--MT 174
Query: 245 EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ + + Q L P +AAG H+ + G V WG ++G LG + P
Sbjct: 175 GQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPA 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+++AL + I+++ G+ T ++++G V++FG G LGHN+
Sbjct: 235 LLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A+T G V+ +G N GQLG T + P +++L+ R+I + G
Sbjct: 193 AQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGED 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T ++ G V+ FG +G + G T +P+ V L V Q A G T A
Sbjct: 253 HTAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFT 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G++ +F G + +LG + N P P+ G
Sbjct: 311 PSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKG 343
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 25/312 (8%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 167 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 226
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 227 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 282
Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 283 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 339
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 282
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 340 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 397
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457
Query: 343 LGHNAIADGQVC 354
LG+ D +C
Sbjct: 458 LGNPLSEDTSIC 469
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 260 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 319
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +IS AGQ++A+G +FG +G T V P+ VESLK + A G + TA
Sbjct: 320 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 377
Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 378 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 431
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 432 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 485
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 486 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 429 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 488
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 489 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 25/312 (8%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 165 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 224
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 225 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 280
Query: 177 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 281 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 337
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 282
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 338 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 395
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455
Query: 343 LGHNAIADGQVC 354
LG+ D +C
Sbjct: 456 LGNPLSEDTSIC 467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 258 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 317
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +IS AGQ++A+G +FG +G T V P+ VESLK + A G + TA
Sbjct: 318 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 375
Query: 163 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 207
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 376 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 429
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 266
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 430 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 483
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 484 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 427 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 486
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 487 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 105 bits (263), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 31/275 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H AV + G + ++G +GQLGHG T + P+ I+SL I Q G T+ ++
Sbjct: 815 HGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKN 874
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G+VY S+G +EYG G VT SP V +L+ V+Q A G+ AVL+ V
Sbjct: 875 GKVY-----SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPSGMAVYSV 229
F GN A +G ++ ++P + + Y ++ L C S A+
Sbjct: 930 LVF--GNGAAMG-------------AASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITEC 974
Query: 230 G----CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
G G G +LGHG + E P+LIE + +++ ++ G H A + GR+ T G
Sbjct: 975 GDVYTWGTGQELGHGGNSTETSPKLIEALRNQSIRQ--ISCGGRHTAFLTDSGRIFTCGK 1032
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+G LG + + ++ PK +++L I V+ G+
Sbjct: 1033 DSFGQLGQMSGD-QNKPKRIESLTKTTFISVSCGE 1066
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 22/311 (7%)
Query: 46 SQAIAGPGHSIAV---TSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIR--SLQGIRIIQ 99
S +++ H A+ TS+G++ ++GS S+ +LG T +++ +P P R + I
Sbjct: 695 SPSLSSTAHRSAIHLDTSRGLM-TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICS 753
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAI 156
++G+ + ++++ G VY +G+ + + G + P +ESL + VV +I
Sbjct: 754 ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSI 811
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G A + G + T+ G + +LGH N +EP ++ +L + + Q+ G + +
Sbjct: 812 GFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPK-IIQSLTSFWITQVQCGEKHTI- 869
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C VYS G G+LG G T P + + N+ + +A+G+ H AV+
Sbjct: 870 --CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNV--LQIASGSTHCAVLTT 925
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V +G G G S+P +V +L + + G Y+T ++E GDVY++G
Sbjct: 926 SKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG 981
Query: 337 CGESASLGHNA 347
G+ G N+
Sbjct: 982 TGQELGHGGNS 992
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H+I +T G VYS+G++ GQLG G + P + +L+ ++Q A+G+
Sbjct: 859 TQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGST 918
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+++ + +V FG + + +V+ P LV SLK + + + G++ TA ++
Sbjct: 919 HCAVLTTSKEVLVFGNGA------AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAIT 972
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G VYT WG LGH + P L+ L N + QI+ G + L SG
Sbjct: 973 ECGDVYT--WGTGQELGHGGNSTETSPK-LIEALRNQSIRQISCGGRHTAFLT--DSGR- 1026
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+++ G G+LG S D+ P+ IE
Sbjct: 1027 IFTCGKDSFGQLGQMS-GDQNKPKRIESL 1054
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 16/293 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ ++ VT V++ G+N SG LG G + PR I L G +I+ + G G +
Sbjct: 29 SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVA 88
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
I+ A G+V+++G + + + G L +P LV + L V++ A G+ T L+ +
Sbjct: 89 IATADGEVFSWGHNGYSQLGNGTSTHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTD 146
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+ + + N ++G + N P + L+N VV IA G L ++A SG +Y
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ--LCSMAVLDSG-EIY 203
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ +++ P I Q +N+ + VA G H + +G V +WG
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNV--IQVACGYAHTIALTDEGFVYSWGANS 261
Query: 288 YGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG GN+ ++VP ++ + +++V A H + +T+ ++ G V +G
Sbjct: 262 YGQLGTGNKCNQAVPTLINTEKERMSEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
GP +IA T+ G V+S+G N QLG+GT+ P + + L G R+I+ A G+ T+
Sbjct: 84 GPHVAIA-TADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
++ G+V+A+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDSG 200
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + + + +LG N P + L+ + V+Q+A GY + +AL G VYS
Sbjct: 201 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNVIQVACGYAHTIALT--DEGF-VYS 256
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G++ ++ P LI + + V + +A Q G+V WG R
Sbjct: 257 WGANSYGQLGTGNKCNQAVPTLINT-EKERMSEVAACHTSHTSAAKTQSGQVLMWGQCR 314
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 13/262 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P ++ ++ + +AA + ++D +V+A G + G G+ + P+ ++
Sbjct: 15 PEELKLIRQACVFGSAANEALYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDV 70
Query: 146 LKNIFVVQAAIGN-FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
L +V + G A+ + +G V FSWG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTSTHGLTPALVSTNLLGK 128
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V+++A G + +AL + V++ G G++G GS ++ PR + L N V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G + V G + WG+ G LG GN + P + AL V I VA G
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAH 244
Query: 323 TFVVSEDGDVYSFGCGESASLG 344
T ++++G VYS+G LG
Sbjct: 245 TIALTDEGFVYSWGANSYGQLG 266
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G +Y +G N +GQLG G + P I +LQG+ +IQ A G T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEG 252
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTF 173
VY++G +S+G+ G + + V P L+ + K + V A + +A ++ G+V
Sbjct: 253 FVYSWGANSYGQLGTGNKCNQAV--PTLINTEKERMSEVAACHTSHTSAAKTQSGQV--L 308
Query: 174 SWGN-------DARLGHHTEPNDV 190
WG L H + +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
+ + KP+ +A LK G W + + C E Q I + +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A SG VY G G
Sbjct: 184 NNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 41/350 (11%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS-KG 62
K IF +EAE Q ++Q C G+ + T+
Sbjct: 6 KWPIFSLCSEAELQLIRQAC------------------------VFGSAGNEVLYTTVND 41
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 121
++ G+N G LG G + PR + L G +I + G+G +L + G+V+ +G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGH 101
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++
Sbjct: 102 NAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G + N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 161 GSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGS 217
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 218 SGNQPTPCRVSALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275
Query: 302 PKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
P V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 276 PTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGP-HVVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G L+ + +L N V + A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + ++A +G VY G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H+A +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPAPVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
++ ++ G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRISALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
T VL+ EG+VY + + +LG + N P P++ +E +++IAA C+L
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIIEIAA--CHL 318
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV + G VY +G N +GQLG G++ + P I +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE + I + + + +A ++ G VY
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAH-TSAAKTQGGHVYM-- 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G +P + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 150/302 (49%), Gaps = 10/302 (3%)
Query: 48 AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 104
+IAG ++ VT G VY G ++G+LG G TE P + +L ++ + G
Sbjct: 2906 SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGG 2965
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ I+ G+V+++G+ G+ +G ++L SP L+E+L++ +V+ A G+ +A +
Sbjct: 2966 RHSLCITREGKVFSWGEGIDGKLGHGDVTSRL--SPTLIEALESKLIVEIACGSSHSAAV 3023
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +YT+ G+ RLGH P + L++ V+ IA G LA +
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDSKTLHIPKQ-VKALQDYKVIDIACGSRDAQTLALTDNN- 3081
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G P+ I+ L +A GA + + G+V TWG
Sbjct: 3082 CVWSWGDGDFGKLGRGGSEGCNIPQKID--ALCGRDVCRIACGAQFSLALSTTGKVWTWG 3139
Query: 285 WGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G Y LGHGN+ P++++ L + +A G V++ G+VYS+G +
Sbjct: 3140 KGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199
Query: 344 GH 345
G+
Sbjct: 3200 GN 3201
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 141/286 (49%), Gaps = 12/286 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +G N GQLG + P ++++ +R + A G+ +++ G+VY G+ +
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGA 2930
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G G+ T+ ++ P +++L FV + + G + ++REG+V+++ G D +L
Sbjct: 2931 NGR--LGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH + + P L+ LE+ +V+IA G + A+ +Y+ G G G+LGHG
Sbjct: 2989 GHGDVTSRLSP-TLIEALESKLIVEIACGSSHSAAVTADGE---LYTWGLGDYGRLGHGD 3044
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECE 299
P+ ++ Q + + + +A G+ A + C W WG +G LG G E
Sbjct: 3045 SKTLHIPKQVKALQ--DYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGC 3102
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
++P+ + AL +A G + +S G V+++G G+ LGH
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGH 3148
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 129/268 (48%), Gaps = 33/268 (12%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
RS +R G T + S +V+ +G + G+ G +G+K V SP ++++ +
Sbjct: 2848 RSDDTLRNENKGTGIDNTDIDS---RVFVWGLNDKGQLG-GCKGSK-VKSPTEMKNIAAL 2902
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI--PVVQI 207
V A G+ +++ +G+VY G + RLG LG ENI PV
Sbjct: 2903 RPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLG-------------LGNTENISIPVQLD 2949
Query: 208 AAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
++ + P G V+S G G+ GKLGHG T P LIE + +
Sbjct: 2950 TLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALE--S 3007
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V +A G+ H+A V DG + TWG G YG LGHG+ + +PK V+AL D K I +A
Sbjct: 3008 KLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIAC 3067
Query: 319 G--DYTTFVVSEDGDVYSFGCGESASLG 344
G D T ++++ V+S+G G+ LG
Sbjct: 3068 GSRDAQTLALTDNNCVWSWGDGDFGKLG 3095
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 18/292 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 105
Q + + IA+T+ G VYS N+ + P + SL I+I + AA
Sbjct: 473 QIMCSSDNIIALTNNGRVYSLAYNARCE----------APVLLDSLIDIKIKKIAANVEG 522
Query: 106 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G VY++G G +G + P+LV+ L N + Q A G+ ++A +
Sbjct: 523 EHYLALSSDGCVYSWGSGDGGRLGHG----DIRREPELVKELVNKKITQIACGSTYSAAV 578
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ G +YT+ G+ RLGH + + P L+ L VV +A G LA G+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGNSEDRLLP-TLVAGLSGSHVVDVACGSGDAHTLAIDKDGI 637
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P+++E + N V V G+ + +G+DG V TWG
Sbjct: 638 -VWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWG 696
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGHG + PK+V+ L + + +A G ++++ ++++G
Sbjct: 697 KSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H++ +TS V+S+G G+LGHG PR I +L G +I+ + G+ +
Sbjct: 3864 SGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAA 3923
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ G++Y +GK +G +G L P+L+E+LK+ V+ A G+ L+
Sbjct: 3924 ITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYKVIDVACGSGDAQTLAITDD 3981
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+SWG+ +LG +D PL + +L + V ++ G + +AL +
Sbjct: 3982 DCVWSWGDGDYGKLGRGG--SDGCKKPLRIESLIGMAVCKVECGSQFSVALT---KNGDL 4036
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G G +LGHG+ + PR + Q Q V VAAG+ H G V TWG
Sbjct: 4037 YTWGKGDYYRLGHGTNDHVRRPRKVACLQ--GKQIVTVAAGSLHCVACTDAGEVFTWGDN 4094
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G LG+G P +V L +VK V G +F S + +
Sbjct: 4095 DEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPI 4140
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 26/258 (10%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I Q + + +++ G+VY+ ++ EA P L++SL +I + + A
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEA------------PVLLDSLIDIKIKKIAA 518
Query: 157 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYC 212
G + A LS +G VY++ G+ RLGH D+ P L+ L N + QIA G
Sbjct: 519 NVEGEHYLA-LSSDGCVYSWGSGDGGRLGH----GDIRREPELVKELVNKKITQIACGST 573
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
Y A+ S +Y+ G G G+LGHG+ D P L+ ++ V +G H
Sbjct: 574 YSAAVT---SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTL 630
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDG 330
+ +DG V +WG G YG LG G +C VPKVV+ L ++ ++V G + + +DG
Sbjct: 631 AIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDG 690
Query: 331 DVYSFGCGESASLGHNAI 348
V+++G + LGH +
Sbjct: 691 TVWTWGKSDGYRLGHGTL 708
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+ +T +G V+S+G G+LGHG P I +L+ I++ A G+ + +
Sbjct: 2964 GGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAV 3023
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G++Y +G +G +G +K + P+ V++L++ V+ A G+ L+
Sbjct: 3024 TADGELYTWGLGDYGRLGHG--DSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNN 3081
Query: 171 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+SWG+ +LG P + L V +IA G + LAL+ + V++
Sbjct: 3082 CVWSWGDGDFGKLGRGGSEGCNIPQK-IDALCGRDVCRIACGAQFSLALS---TTGKVWT 3137
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G +LGHG+ + + P+LIE L + +A GA H V G V +WG +
Sbjct: 3138 WGKGDYYRLGHGNDSHYRSPQLIEG-PLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDH 3196
Query: 289 GCLGHGNEECESVPKV-VQALNDVKAIHVATG 319
G G+GN P++ + L+ VK H+A G
Sbjct: 3197 GQQGNGNTTVNKRPQICLGELDGVKISHIACG 3228
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 48 AIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGA 104
A+AG ++ + TS+G VY+ G SG+LG G ++ P I LQ ++I + +G
Sbjct: 3807 AVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGG 3866
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
M+++ +V+++G G+ +G + + +P+ +E+L +V + G+ +A +
Sbjct: 3867 RHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAI 3924
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G +YT+ G RLGH + ++P LL L++ V+ +A G LA
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGDDCLKPK-LLEALKSYKVIDVACGSGDAQTLAITDDD- 3982
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLG G K P IE L+ + V G+ + + ++G + TWG
Sbjct: 3983 CVWSWGDGDYGKLGRGGSDGCKKPLRIES--LIGMAVCKVECGSQFSVALTKNGDLYTWG 4040
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG + P+ V L + + VA G ++ G+V+++G + LG
Sbjct: 4041 KGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLG 4100
Query: 345 H---NAIADGQVCSLL 357
+ N I + + ++L
Sbjct: 4101 NGTLNPIPEPTLVTVL 4116
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G +S AVTS G +Y++G S G+LGHG +E+ P + L G ++ A G+G
Sbjct: 566 TQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSG 625
Query: 106 --RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFT 161
T+ I G V+++G +G+ G G+ P++VE+LK N ++V G+ F+
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRG--GSDCCKVPKVVETLKHHNKYIVNVLCGSQFS 683
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--C 219
L ++G V+T+ + RLGH T + P + G L N +V IA G + LAL C
Sbjct: 684 VALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEG-LINYHIVDIAVGPSHCLALTDNC 742
Query: 220 Q 220
Q
Sbjct: 743 Q 743
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 65 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
Y +G N GQLG + P + +R A G +++ G+VYA G
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGS 3832
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLG 182
G G + +P ++E L+++ + + ++ G VL+ V+++ G D +LG
Sbjct: 3833 GRLGIGRSDN--IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
H + + P + L +V I+ G + A+ S +Y+ G G G+LGHG
Sbjct: 3891 HGDKLSSETPRKIEALLGK-QIVHISCGSSHSAAIT---SKGELYTWGKGRYGRLGHGDG 3946
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
D P+L+E + + V +G + D V +WG G YG LG G + P
Sbjct: 3947 DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKP 4006
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+++L + V G + ++++GD+Y++G G+ LGH
Sbjct: 4007 LRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGH 4049
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
L G A C+ E G S+A+T G +Y++G +LGHGT + RPR + LQG
Sbjct: 4012 LIGMAVCKVE-----CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQG 4066
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+I+ AAG+ + +DAG+V+ +G + G+ G + P LV L+N+ + +
Sbjct: 4067 KQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNP--IPEPTLVTVLENVKLNRV 4124
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
G+ ++F+W +A + PN +
Sbjct: 4125 GCGS-----------AHSFAWSTEAPIDIGYMPNQI 4149
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 57/221 (25%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 108
G HS AVT+ G +Y++G G+LGHG ++ P+ +++LQ ++I A G+ +T+
Sbjct: 3016 GSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTL 3075
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++D V+++G FG+ G G++ PQ +++L V + A G F+ LS G
Sbjct: 3076 ALTDNNCVWSWGDGDFGKLGRG--GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTG 3133
Query: 169 RVYTFSWGNDARLGH-----HTEPNDVE-------------------------------- 191
+V+T+ G+ RLGH + P +E
Sbjct: 3134 KVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGD 3193
Query: 192 ----------------PHPLLGTLENIPVVQIAAGYCYLLA 216
P LG L+ + + IA G + +A
Sbjct: 3194 NDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ G G+LG + K P E + L+PV +A G+ +V DG+V G
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSP--TEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGE 2928
Query: 286 GRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G LG GN E S+P + LN VK + V G + ++ +G V+S+G G L
Sbjct: 2929 GANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988
Query: 344 GHNAIADGQVCSLLFLSIFQYLQ 366
GH G V S L ++ + L+
Sbjct: 2989 GH-----GDVTSRLSPTLIEALE 3006
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 96
+A C R+ + G S+A+++ G V+++G +LGHG P+ I L+ R
Sbjct: 3109 DALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKR 3168
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
I + A GA + ++D G+VY++G + G+ G T + PQ+
Sbjct: 3169 ITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG--NTTVNKRPQI 3212
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ G S+A+ G V+++G + +LGHGT + P+ + L I+ A G
Sbjct: 675 NVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSH 734
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFF 160
+ ++D Q++ +G D +Y + P + ++ F+ A G NF
Sbjct: 735 CLALTDNCQIFTWGSDV---QKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFL 788
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQA 100
++ ++ G H +AVT G VYS+G N GQ G+G T RP+ + L G++I
Sbjct: 3166 KKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHI 3225
Query: 101 AAGAGRTM 108
A G+ ++
Sbjct: 3226 ACGSSHSI 3233
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ +T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 45 LYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 104
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G V + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 105 EVFTWGHNAYNQLGNGTTNHGSVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 163
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
N ++G + N P + G L+N VV IA G + ++A SG VY G
Sbjct: 164 CNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQ--MCSMAVVDSG-EVYVWGYNGN 220
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS + P I Q + +Q V A G H V+ DG+V WG YG LG G
Sbjct: 221 GQLGLGSSGNHSTPCRIAALQGIRVQRV--ACGYAHTLVLTDDGQVYAWGANSYGQLGTG 278
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 279 NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 332
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 137 NKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNI 196
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D+G+VY +G + G+ G G ++P + +L+ I V + A G
Sbjct: 197 ACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNH--STPCRIAALQGIRVQRVACGYAH 254
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ +G+VY + + +LG + N P P++ +E +++IAA
Sbjct: 255 TLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 301
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 92 LQGIRIIQAAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
LQ IR AG +L ++ +++ G + G G+ + P+ ++SL
Sbjct: 28 LQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGC--LGLGDIQSTIEPRRLDSLSGKK 85
Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+ + G+ VL + EG V F+WG++A +LG+ T + P + L N V+++
Sbjct: 86 IACLSYGSGPHIVLATTEGEV--FTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEV 143
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + L L S V++ GC G++G GS ++ PR + L N V +A G
Sbjct: 144 ACGSYHSLVLT---SDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGC-LQNRVVVNIACG 199
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ V G V WG+ G LG G+ S P + AL ++ VA G T V++
Sbjct: 200 QMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLT 259
Query: 328 EDGDVYSFGCGESASLG 344
+DG VY++G LG
Sbjct: 260 DDGQVYAWGANSYGQLG 276
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ P I +LQGIR+ + A G T++++D G
Sbjct: 203 SMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDG 262
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE I + A +A ++ G VY
Sbjct: 263 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSTHTSAAKTQGGHVYM-- 319
Query: 175 WG 176
WG
Sbjct: 320 WG 321
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 53 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 111
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G SVP + L++ + I VA G Y + V++ DG+V+++GC S +G
Sbjct: 112 NAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVG 171
Query: 345 HNAIAD 350
+ A+
Sbjct: 172 SGSTAN 177
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI-SDAGQVY 117
T V+ G+N SG LG G PR + L G +I + G+G ++I +D G+VY
Sbjct: 63 TENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVY 122
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G LV + + +L N V++ A G+ + VL+ +G V+ + + N
Sbjct: 123 TWGHNAYNQLGNGTTNHGLVPT-HISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNN 181
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + G L+N IA G + ++A SG VY G G+L
Sbjct: 182 SGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQ--MCSMAVVESG-EVYVWGYNGNGQL 238
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS ++ P I Q + + +V G H V+ +G + WG YG LG GN+
Sbjct: 239 GLGSSGNQPTPCRIAALQGIRVHKIV--CGYAHTLVLTDEGHLYAWGANSYGQLGTGNKS 296
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+S P V D V I +T+ ++ G +Y +G C G+S +L H
Sbjct: 297 NQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTLPH 347
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 108
+GP H + T +G VY++G N+ QLG+GTT P I + G R +I+ A G+ ++
Sbjct: 108 SGP-HVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSL 166
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ G+V+A+G ++ G+ G + + ++ L+N A G + + G
Sbjct: 167 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-KVTGCLQNKIATTIACGQMCSMAVVESG 225
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY + + + +LG + N +P P + L+ I V +I GY + L L + +Y
Sbjct: 226 EVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGH---LY 280
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+++++ +P + + + + A +A Q G + WG R
Sbjct: 281 AWGANSYGQLGTGNKSNQSYPTPV-SVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCR 339
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
R+ + G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ
Sbjct: 152 NRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTI 211
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + ++G+VY +G + G+ G G + +P + +L+ I V + G
Sbjct: 212 ACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVHKIVCGYAH 269
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG +Y + + +LG + N P P+ ++E V++IAA
Sbjct: 270 TLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPV--SVEKDRVIEIAA 316
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
C + + + IA G S+AV G VY +G N +GQLG G++ + P I +LQGIR+
Sbjct: 202 CLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVH 261
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ G T++++D G +YA+G +S+G+ G + + +P VE + + + A
Sbjct: 262 KIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSVEKDR-VIEIAACHSA 320
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G +Y WG
Sbjct: 321 HTSAAKTQSGHIYM--WG 336
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 20/302 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ +T +G +Y+ G+N GQLGH T RP+ + SL+ I + G ++
Sbjct: 44 GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLA 103
Query: 110 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+++ GQV+++G ++ G +AE G Q T P++++++ VVQ A G + L+
Sbjct: 104 LTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYHCLALT 158
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G +Y +WG+++ +LG T V L+ +L +P+ IA G + + A SG
Sbjct: 159 NNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFAVSKSG 214
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
A++ G G+LG +P + + L ++ ++ G + + +G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEGGVFTC 271
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 342
G G +G LGHG+ E VP+ V L K +A G +T V G +Y FG G
Sbjct: 272 GAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQ 331
Query: 343 LG 344
LG
Sbjct: 332 LG 333
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A+T+ G V+S+GSN+ GQLGH + PR I+++ ++Q A+G +
Sbjct: 97 GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 156
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G++YA+G +S+G+ G K V P L++SL + + A G + +S+ G
Sbjct: 157 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 215
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + P L TL ++ V I+ G + + L + V+
Sbjct: 216 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 269
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGHGS ++E PR + F+L+ + +A G H A V G++ +G G
Sbjct: 270 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 327
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G S P++V+
Sbjct: 328 GVGQLGIGMVGNHSTPQIVR 347
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 13/300 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G+ + G+LG G EEE PR + Q +++ G T+ ++ G++YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ G+ + + T PQ + SL+N + + G + L+ G+V FSWG++A
Sbjct: 63 NDHGQLGHDLD-TLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQV--FSWGSNAVG 119
Query: 180 RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH E N +P P ++ + VVQIA+G + LAL + +Y+ G G+LG
Sbjct: 120 QLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAWGSNSYGQLG 175
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
G+ T EK P L + +A G H+ V + G + WG +G LG +
Sbjct: 176 IGT-TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNS 234
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
P ++ L + +++ GD + ++ +G V++ G G LGH + ++ V +F
Sbjct: 235 RCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF 294
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q +G H +A+T+ G +Y++GSNS GQLG GTT E+ P I+SL G+ I A G
Sbjct: 146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 205
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G ++ +GK++FG + G+ P + +L+++ V + G+ F+ L+
Sbjct: 206 HSFAVSKSGAIFGWGKNTFG--QLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 263
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
EG V+T G +LGH + N++ P + L + QIA G + LA PS
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 320
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
+Y G G G+LG G + P+++
Sbjct: 321 IYGFGLGGVGQLGIGMVGNHSTPQIV 346
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + SL G +I + G+G +L + G+++ +G +
Sbjct: 137 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHN 196
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 197 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 255
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 256 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSVAVVDNG-EVYVWGYNGNGQLGLGSS 312
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P I Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 313 GNQSTPCRIAALQGICVQRV--ACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYP 370
Query: 303 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 371 TPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 416
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 45/319 (14%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 100 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGDIQSTIEP 159
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H I T++G ++++G N+ QLG+GTT P I +
Sbjct: 160 RRLDSLSGKKIACFSYGSGP-HVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + ++ L+N V
Sbjct: 219 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTGCLQNKVV 277
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V A G + + G VY + + + +LG + N P + L+ I V ++A GY
Sbjct: 278 VNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTP-CRIAALQGICVQRVACGY 336
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAW 269
+ L L + VY G G+LG G+++++ +P +E+ +++ + A +
Sbjct: 337 AHTLVLTDEGQ---VYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIE----IAACHST 389
Query: 270 H-AAVVGQDGRVCTWGWGR 287
H +A Q G V WG R
Sbjct: 390 HTSAAKTQGGHVYMWGQCR 408
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
LQ IR AG +L S +++ G + G G+ + P+ ++SL
Sbjct: 112 LQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGC--LGLGDIQSTIEPRRLDSLSGKK 169
Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+ + G+ +L + EG + F+WG++A +LG+ T + + P + L N V+++
Sbjct: 170 IACFSYGSGPHVILATTEGEI--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 227
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + L L S V++ G G++G GS ++ PR + L N V +A G
Sbjct: 228 ACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGC-LQNKVVVNIACG 283
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ V +G V WG+ G LG G+ +S P + AL + VA G T V++
Sbjct: 284 QMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLT 343
Query: 328 EDGDVYSFGCGESASLG 344
++G VY +G LG
Sbjct: 344 DEGQVYVWGANSYGQLG 360
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + +G H + +G + TWG
Sbjct: 137 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGP-HVILATTEGEIFTWGH 195
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 196 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 255
Query: 345 HNAIAD 350
+ A+
Sbjct: 256 SGSTAN 261
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 14 AERQDLKQKCGGSWKLVLRFLLAGEACCRRENS---QAIAGPGHSIAVTSKGVVYSFGSN 70
A +L +C G+ LV++ L+ +E+S Q AG H++ +++ G +Y+ GSN
Sbjct: 7 ATHHELCIECPGNLDLVIKPTLSK----WKESSHIQQISAGEFHTLYLSNNGHLYTCGSN 62
Query: 71 SSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
GQLG T + P + + +G + A G +M + + GQ +++G DS G+
Sbjct: 63 EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGS 122
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
+ G+ P+++++L V+Q A G++ T VL+ G +Y + + + G N
Sbjct: 123 NL-GSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK 181
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
L ++ IP+ IA G + AL+ SG AV+ G G+LG R +P
Sbjct: 182 ETTPQALSSILGIPIALIACGSNHTFALS--QSG-AVFGWGKNSHGQLGLQDRESRCYPT 238
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
++ L N++ ++ G A + DG V T G G YG GHGN + E VP+ V L
Sbjct: 239 HLKT--LRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELM 296
Query: 310 DVKAIHVATG 319
VA G
Sbjct: 297 GSTVTQVACG 306
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 15/246 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A+ G +S+GS+S GQLG + + +P+ I++L +IQ A G+ T++
Sbjct: 96 GLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVV 155
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G +YA+G +S+G+ G + K T+PQ + S+ I + A G+ T LS+ G
Sbjct: 156 LTNNGDLYAWGANSYGQCGLGNRSNK-ETTPQALSSILGIPIALIACGSNHTFALSQSGA 214
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V F WG ++ +LG + P L TL N+ V I+ G + L V+
Sbjct: 215 V--FGWGKNSHGQLGLQDRESRCYPTH-LKTLRNVKVCHISCGEDFTAFLTLDG---GVF 268
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWG 286
+ G G G+ GHG+ DE PR + +L+ VA G H VG+ R+ G+G
Sbjct: 269 TCGAGEYGQTGHGNTKDELVPRKV--MELMGSTVTQVACGRRHMLCRVGE--RILACGYG 324
Query: 287 RYGCLG 292
G LG
Sbjct: 325 ARGQLG 330
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 13/261 (4%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAA 155
I Q +AG T+ +S+ G +Y G + G+ G Q TSP LV++ K + A
Sbjct: 37 IQQISAGEFHTLYLSNNGHLYTCGSNEVGQL--GRQTNSADGTSPVLVDTFKGCTLSTIA 94
Query: 156 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
G + L G+ FSWG+D+ +LG + + + ++ TL V+Q+A G +
Sbjct: 95 CGLQHSMALDEWGQ--PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ L + +Y+ G G+ G G+R++ E P+ + +L + ++A G+ H
Sbjct: 153 TVVLT---NNGDLYAWGANSYGQCGLGNRSNKETTPQALSS--ILGIPIALIACGSNHTF 207
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ Q G V WG +G LG + E P ++ L +VK H++ G+ T ++ DG V
Sbjct: 208 ALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGV 267
Query: 333 YSFGCGESASLGHNAIADGQV 353
++ G GE GH D V
Sbjct: 268 FTCGAGEYGQTGHGNTKDELV 288
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI------AGPGHSIA 57
+ + KP+ +A LK G W + + C E Q I G+ +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQAWVFGSAGNEVL 64
Query: 58 VTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T+ ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A +G VY G G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G L+ + +L N V + A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGSSGNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H+A +T+ ++ G VY +G C G+S L H
Sbjct: 269 NKSNQSYPAPVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 47/320 (14%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++ + A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + + G VY + + + +LG + N +P P + L+ I V ++A
Sbjct: 183 VVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRISALQGIRVQRVAC 240
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P ++E+ +++ + +A
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHT 297
Query: 268 AWHAAVVGQDGRVCTWGWGR 287
+A Q G V WG R
Sbjct: 298 ---SAAKTQGGHVYMWGQCR 314
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G +P + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 37 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 96
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 97 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 154
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 155 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 211
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 212 IYSFGLGGNGQLGTGSTSNRKSP 234
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
R R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 23 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 81
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 82 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 138
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 139 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 193
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 194 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++SL +I +VQ A G + + LS+ V F WG + +LG T+ LL +L
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 84
Query: 201 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
IP +Q+AAG + ++L L SG A++ G G+LG D P L++ L +
Sbjct: 85 GIPFMQVAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRS 137
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
+ V + G H A + ++G V T+G G YG LGH + E P+ V L +A
Sbjct: 138 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 197
Query: 319 G-DYTTFVVSEDGDVYSFGCGESASLG 344
G +T+ V G +YSFG G + LG
Sbjct: 198 GRQHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G+ ++ P+L++
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 82
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 83 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 141
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 142 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 176
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 90 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 149
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 150 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 207
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 208 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 240
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G HS A+T+ G V ++G G+LGHG +E++ RP+ + +L G R I A G+G +T+
Sbjct: 9 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 68
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
I+D V+++G +G+ G G KL P +ESL + VV+ G+ F+ L++
Sbjct: 69 CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 125
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+ RLGH + + P + L+ ++ IA G + +AC SG VY
Sbjct: 126 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATGSLH--CVACSDSG-EVY 181
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ G G+LG G+ T + PRL+ Q
Sbjct: 182 TWGDNDEGQLGDGTVTAIQRPRLVAALQ 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
V A G+ +A ++ G V T+ G RLGH + + P L+ L + IA G
Sbjct: 3 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACG 61
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
L C V+S G G GKLG G K P IE L L V V G+
Sbjct: 62 SGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQF 118
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ + + G V TWG G + LGHG+ + PK V AL K I +ATG S+ G
Sbjct: 119 SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 178
Query: 331 DVYSFGCGESASLGHNAI 348
+VY++G + LG +
Sbjct: 179 EVYTWGDNDEGQLGDGTV 196
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G VY++G +LGHG+ + RP+ + +LQG +II A G+ +
Sbjct: 115 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 174
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
SD+G+VY +G + E + G + P+LV +L+ +V+ G+ T LS
Sbjct: 175 SDSGEVYTWGDND--EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ + A G+ + I+ +G V +GK +G +G +L P+LVE+L +
Sbjct: 1 MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDI 58
Query: 155 AIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A G + T ++ + V+++ G+ +LG P+ + +L + VV++ G
Sbjct: 59 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQ 117
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ +AL SG AVY+ G G +LGHGS + P+ + Q + + +A G+ H
Sbjct: 118 FSVALT--KSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ--GKKIISIATGSLHCV 172
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G V TWG G LG G P++V AL + V G T +S
Sbjct: 173 ACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 62 SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 121
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ +G VY +GK F +G V P+ V +L+ ++ A G+ S G
Sbjct: 122 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 179
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ ++ +LG T P L+ L+ +V++ G + LAL+
Sbjct: 180 VYTWGDNDEGQLGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALS 227
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N SG LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V+ I+ G + ++A +G VY G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQ--MCSMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNA 347
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H+
Sbjct: 293 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHHT 348
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 SCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 315
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Query: 175 W--GNDARLGHHT 185
G L HHT
Sbjct: 336 QCRGQSVILPHHT 348
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + DG V TWG
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
Length = 475
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 149/322 (46%), Gaps = 39/322 (12%)
Query: 46 SQAIAG--PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
S+ I G H++ +T++G VYS+G N GQLGHG P+PI SLQ +++ A G
Sbjct: 102 SRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATG 161
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ +++ G V+AFG ++ G+ G T V SP + + K +V + G F+ +
Sbjct: 162 KNHTLCLTENGDVFAFGDNAQGQLGLGNLSTN-VPSPTHI-AYKGNPIVDVSCGGEFSVI 219
Query: 164 LSREGRVYTFSWGNDARLGHHTE---------------------PNDVEPHPLLG----T 198
L EG VY+F +LG++T+ P VE L G
Sbjct: 220 LDCEGYVYSFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVE--KLKGGQVLP 277
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
L ++ + I+ G +++AL S V++ G G G+LGH + DE PRL+ F+
Sbjct: 278 LNDVKITSISCGNNHVVALD---SKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAG 334
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
V V AG + + + G T WG G + + E PK + L + +
Sbjct: 335 RGAVQVYAGYSFSIALNEMG--STMFWGLQGSI--SSRETTMYPKPLPDLQGWEIRSIGC 390
Query: 319 GDYTTFVVSEDGDVYSFGCGES 340
G Y VV+ D V +G G S
Sbjct: 391 G-YRHTVVAADESVIVWGTGTS 411
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 84 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
++P +SL GI++ + G + ++I++ G VY++G++ G+ +G + SP+
Sbjct: 88 FKPHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNR--VRYDSPK 145
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
++SL++ VV A G T L+ G V+ F +LG +V P P +
Sbjct: 146 PIDSLQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNV-PSPTHIAYKG 204
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
P+V ++ G + + L C+ VYS GC G+LG+ TD K+
Sbjct: 205 NPIVDVSCGGEFSVILDCE---GYVYSFGCPEYGQLGN--NTDGKYFASGNKMAFDNVKN 259
Query: 248 ----PRLIEQF---QLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
P +E+ Q+L L V + + G H + RV TWG+G YG LGH ++
Sbjct: 260 AFRIPLWVEKLKGGQVLPLNDVKITSISCGNNHVVALDSKKRVFTWGFGGYGRLGHSEQK 319
Query: 298 CESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFG 336
E P+++ A+ V G + ++E G +G
Sbjct: 320 DEHTPRLLTVFERAGRGAVQVYAGYSFSIALNEMGSTMFWG 360
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P + + + V+ + H ++ +G V +WG G LGHGN PK + +
Sbjct: 90 PHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDS 149
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
L K ++ ATG T ++E+GDV++FG LG
Sbjct: 150 LQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLG 186
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
N +PH +L I V ++ G C L G VYS G G+LGHG+R
Sbjct: 86 NLFKPH-RYKSLVGIKVSRVITGCCSNHNLIITNEG-NVYSWGRNECGQLGHGNRVRYDS 143
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+ I+ Q + V A G H + ++G V +G G LG GN A
Sbjct: 144 PKPIDSLQSYKV--VNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNVPSPTHIA 201
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ V+ G + ++ +G VYSFGC E LG+N DG+
Sbjct: 202 YKGNPIVDVSCGGEFSVILDCEGYVYSFGCPEYGQLGNN--TDGK 244
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 20 KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+QK + +L+ F AG Q AG SIA+ G +G S +
Sbjct: 317 EQKDEHTPRLLTVFERAGRGAV-----QVYAGYSFSIALNEMGSTMFWGLQGS----ISS 367
Query: 80 TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
E P+P+ LQG I G T++ +D + S GE G + K +
Sbjct: 368 RETTMYPKPLPDLQGWEIRSIGCGYRHTVVAADESVIVWGTGTSNGELGLG-ESRKSSAN 426
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSR 166
P L++S N+F+ + + G T +++R
Sbjct: 427 PDLMKSASNLFIQRVSCGQTHTLMIAR 453
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 31 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 90
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 91 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 148
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 149 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 205
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 206 IYSFGLGGNGQLGTGSTSNRKSP 228
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
R R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 17 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 75
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 202
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 76 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 132
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 133 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 187
Query: 263 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 188 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++SL +I +VQ A G + + LS+ V F WG + +LG T+ LL +L
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 78
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
IP +Q+AAG + L SG A++ G G+LG D P L++ L + +
Sbjct: 79 GIPFMQVAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQK 133
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 319
V + G H A + ++G V T+G G YG LGH + E P+ V L +A G
Sbjct: 134 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGR 193
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
+T+ V G +YSFG G + LG
Sbjct: 194 QHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G+ ++ P+L++
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 76
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 77 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 135
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 136 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 170
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 84 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 143
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 144 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 201
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 202 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 234
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 69 SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEA 127
+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +++ +
Sbjct: 1 TNCCGCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
G LV + +L N V + A G++ + VL+ +G V+ + + N ++G +
Sbjct: 61 GNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
N + P + G L+N VV IA G + ++A +G VY G G+LG GS ++
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPT 176
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P I Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P V
Sbjct: 177 PCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 234
Query: 308 LND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 235 EKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 275
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T++G V+++G N+ QLG+GTT P I + L ++ + A G+ ++
Sbjct: 36 SGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSL 94
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ G+V+A+G ++ G+ G +L+ ++ L+N VV A G + + G
Sbjct: 95 VLTSDGEVFAWGYNNSGQVGSGSTANQLIPR-RVTGCLQNKVVVNIACGQMCSMAVVNTG 153
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY + + + +LG + N +P P + L+ I V ++A GY + L L + VY
Sbjct: 154 EVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---VY 208
Query: 228 SVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+ G G+LG G+++++ +P ++E+ +++ + A +A Q G V WG
Sbjct: 209 AWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWGQ 265
Query: 286 GR 287
R
Sbjct: 266 CR 267
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
++ ++ G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 80 NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNI 139
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 140 ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 197
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 198 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIIEIAA 244
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G LG G PR +E + + +G H + +G V TWG Y LG+G
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNG 63
Query: 295 NEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
VP + L++ + VA G Y + V++ DG+V+++G S +G + A+
Sbjct: 64 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 120
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 23/290 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G ++++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
L++ Q++ FG +FG +G + V P+ VESL + + A G + TA +
Sbjct: 400 ALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVWHTAAVVEV 457
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G+++T+ G+ RLGH + ++P + +E ++A G+ +
Sbjct: 458 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKVACGHSLTVG 516
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L SG V ++G + G+LG+ ++D K P +E +LL +A GA+H AV+
Sbjct: 517 LTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E P +V+ L D ++A G +YT +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 621
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + A G L++ G+++ +G++S G +GV + V P+LVES
Sbjct: 271 PKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVES 328
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G ++T+ G N LGH T+ + P + G LE +
Sbjct: 329 LAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL- 387
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
Q+A+ C A + +++ G G G LGHG + + +PR +E L L+ +
Sbjct: 388 --QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVE--SLSGLRTIA 443
Query: 264 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V + G++ TWG G LGHG++E P V AL +
Sbjct: 444 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYN 503
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
VA G T ++ G V + G LG N +DG++
Sbjct: 504 FQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGKL 543
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 18/316 (5%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ VT +G ++++G S G+LGHG + +PR + SL + A G T ++ A
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMA 350
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+++ +G + G GT + ++ L+ + V G + TA+++ +++
Sbjct: 351 GELFTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLF 409
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQPSG 223
TF G LGH + N P + +L + + +A G + A+ + S
Sbjct: 410 TFGDGTFGVLGHGDKDNVAYPRE-VESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 468
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVC 281
+++ G G +LGHG + P + N Q V H+ VG G+VC
Sbjct: 469 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACG----HSLTVGLTTSGQVC 524
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
T G YG LG+ + + V L +A G Y V++ +VY++G G +
Sbjct: 525 TMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANG 584
Query: 342 SLGHNAIADGQVCSLL 357
LGH I D + +L+
Sbjct: 585 RLGHGDIEDRKTPTLV 600
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 22/323 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
Q +G H++A++ G VY++G N G LG TT EEE++P + + I+ +AG
Sbjct: 83 QVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAG 142
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T +SD G VYA+G + G+Q + P ++ + ++ +++ A GN TA
Sbjct: 143 DSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAA 202
Query: 164 LSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQIAAGYC 212
L+ G ++T +LG E +EP L+ + + + + G
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEP-ALVRSKKGLKFKDVFCGSF 261
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----QPVVVAAGA 268
+A +G VY+ G G+LG G P ++ LN + + +A G
Sbjct: 262 ATFVVA--KTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQ 319
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVS 327
H V +G+V G YG LG G+ E+ +P + +L++ VA G+ +F VS
Sbjct: 320 HHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVS 379
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
+ G++YS+G G LG+ D
Sbjct: 380 DKGELYSWGMGSCLQLGNGNDED 402
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 40/311 (12%)
Query: 62 GVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--- 117
G + G GQLG G T E +P L+G+ I+Q +G T+ +S G+VY
Sbjct: 45 GQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTWG 104
Query: 118 -----AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
A G+++ E E Q P +V ++ +V + G+ TA LS +G VY
Sbjct: 105 CNDDGALGRETTSEGEEEFQ-------PGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYA 157
Query: 173 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ DA +P+ V+ P ++ T E+ +++IA+G + AL + ++++GC
Sbjct: 158 WGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTSGN---LFTLGC 214
Query: 232 GLGGKLG--------HGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 279
G+LG G R + P L+ + L + V G++ VV + G
Sbjct: 215 AEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVF--CGSFATFVVAKTGSD 272
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDV------KAIHVATGDYTTFVVSEDGDVY 333
V WG YG LG G+ + P V++L+ + K I +A G + T V +G VY
Sbjct: 273 VYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVY 332
Query: 334 SFGCGESASLG 344
+ G + LG
Sbjct: 333 ALGRADYGRLG 343
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 31/304 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
AG H+ A++ +G VY++G+ ++SGQ+G + +P I + + RII+ A+G T
Sbjct: 141 AGDSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHT 200
Query: 108 MLISDAGQVYAFG----------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++ +G ++ G K+ F A G +G + P LV S K + G
Sbjct: 201 AALTTSGNLFTLGCAEQGQLGRVKECF-SARGGRRGLAYILEPALVRSKKGLKFKDVFCG 259
Query: 158 NFFTAVLSREGR-VYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGY 211
+F T V+++ G VY + N +LG P V+ L E + IA G
Sbjct: 260 SFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQ 319
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWH 270
+ + C P+G VY++G G+LG G K L L+ + + VA G
Sbjct: 320 HH--TIVCDPNGK-VYALGRADYGRLGLGDGA--KETALPAHITSLDNEVIEKVACGECV 374
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIH-----VATGDYTTF 324
+ V G + +WG G LG+GN+E + + P VQ N H A G +T
Sbjct: 375 SFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVI 434
Query: 325 VVSE 328
+ +E
Sbjct: 435 LAAE 438
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 24/250 (9%)
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
++GQ G+ G+ G T P + L+ + +VQ G T LS++G+VY
Sbjct: 43 ESGQALTLGQGDVGQLGLGPD-TLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101
Query: 172 TFSWGNDARLGHHTEPN-DVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
T+ +D LG T + E P ++ +++ +V ++AG + AL+ Q + VY+
Sbjct: 102 TWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGT---VYAW 158
Query: 230 GC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G++G +K P +I + + + +A+G H A + G + T G
Sbjct: 159 GTYRDASGQIGLQPDGVKKKPAVILTSESDRI--IKIASGNDHTAALTTSGNLFTLGCAE 216
Query: 288 YGCLGHGNEECESV------------PKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYS 334
G LG +EC S P +V++ +K V G + TFVV++ G DVY+
Sbjct: 217 QGQLGR-VKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYA 275
Query: 335 FGCGESASLG 344
+G LG
Sbjct: 276 WGLNNYGQLG 285
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G+ T G G G LG G + E P V L V + V +G T +S+DG VY+
Sbjct: 43 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 102
Query: 335 FGCGESASLGHNAIADGQ 352
+GC + +LG ++G+
Sbjct: 103 WGCNDDGALGRETTSEGE 120
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 22/298 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-G 105
Q AG + + +KG V + G NS G+LG G + + P+ I I+ + ++ G G
Sbjct: 377 QVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDG 436
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTA 162
++ +SD G+VY++G +G+ +G T P+L++ K I +V A G +A
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLGHGDVATH--KEPKLIQGPFIGKVIELVSA--GYRHSA 492
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPVVQIAAGYCYLLALAC 219
++ +G++YT+ G+ RLGH D P L+ +L ++PV +A G + LAC
Sbjct: 493 AVTSDGQLYTWGEGDHGRLGH----GDCNPRFIPTLVKSLSDMPVGYVACGSTH--TLAC 546
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
G V+S G G GKLGHG+ P+ IE + ++ VAAG + + G
Sbjct: 547 SRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKK--VAAGIHFSVALTCTGE 604
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V TWG G LG G+ E P VV+ L I ++ GD ++ + VY++G
Sbjct: 605 VFTWGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWG 660
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+++ L +V+ +G +S + G T++ P+LV SL ++ V+A
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEG--ATEVTDIPRLVRSLSDVQQVEA-- 380
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLL 215
G + T ++ +G V + RLG N +P P + N + Q+++ C
Sbjct: 381 GQYCTFIIDTKGCVSACGKNSYGRLGLGNSSN--QPVPKRINI-NCKIKQVSSSKGCDGH 437
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+LA +G VYS G G GKLGHG K P+LI Q + +V+AG H+A V
Sbjct: 438 SLALSDTG-EVYSWGDGDYGKLGHGDVATHKEPKLI-QGPFIGKVIELVSAGYRHSAAVT 495
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYS 334
DG++ TWG G +G LGHG+ +P +V++L+D+ +VA G T S DG+ V+S
Sbjct: 496 SDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWS 555
Query: 335 FGCGESASLGH 345
FG G++ LGH
Sbjct: 556 FGSGDNGKLGH 566
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+ +GSNSS Q G TE PR +RSL ++ Q AG T +I G V A GK+S
Sbjct: 344 VFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ--QVEAGQYCTFIIDTKGCVSACGKNS 401
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLG 182
+G G + V P+ + I V ++ G + + LS G VY++ G+ +LG
Sbjct: 402 YGRLGLGNSSNQPV--PKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLG 459
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
H EP + G + ++AGY + A+ S +Y+ G G G+LGHG
Sbjct: 460 HGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVT---SDGQLYTWGEGDHGRLGHGDC 516
Query: 243 TDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECES 300
P L++ L+ PV VA G+ H +DG V ++G G G LGHGN
Sbjct: 517 NPRFIPTLVKS---LSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLY 573
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
P+ ++ L K VA G + + ++ G+V+++G G + G + I
Sbjct: 574 KPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEIT 622
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 72/332 (21%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
+ + G + +TS+G V S G + G+LGHG ++ I +LQG I Q +
Sbjct: 3430 RIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGS 3489
Query: 105 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++ +++ G+V+++G FG+ +G + P+L+ESL ++ V+Q A G+ +AV
Sbjct: 3490 DGHSLALTETGEVFSWGDGDFGKLGHG--NNERQRKPKLIESLYDVVVIQVACGHKHSAV 3547
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
LS++G VY F +LG N P + + G+ + +AC +
Sbjct: 3548 LSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI-----------VHKGFLNIKYIACGQNH 3596
Query: 224 M------AVYSVGCGLGGKLGHGSRTDEKHPR----------------------LIEQFQ 255
V++ G G GGKLG GS+ D P+ L E +
Sbjct: 3597 TICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGE 3656
Query: 256 LL-----NLQPVV-----------------------VAAGAWHAAVVGQDGRVCTWGWGR 287
L NLQ VA G H V+ G V WG
Sbjct: 3657 LYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNC 3716
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G LG G++ P ++Q L+D +AT
Sbjct: 3717 EGILGFGHDLPVQKPMIIQILSDKNIKQIATS 3748
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRII 98
C ++ S + GHS+A++ G VYS+G G+LGHG P+ I+ G I
Sbjct: 423 CKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE 482
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+AG + ++ GQ+Y +G+ G +G + + P LV+SL ++ V A G+
Sbjct: 483 LVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFI--PTLVKSLSDMPVGYVACGS 540
Query: 159 FFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
T SR+G V++F G++ +LGH +P + G L + + ++AAG + +AL
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEG-LRHYKIKKVAAGIHFSVAL 599
Query: 218 ACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
C G G LG G S P ++E L+ + ++ G H + +
Sbjct: 600 TCTGEVFT-----WGQGSNLGCGSSEITLFSPAVVE--DLMQQMIIDISVGDSHCLALTR 652
Query: 277 DGRVCTWGWGRYGCLGHG 294
+ V WG G G G
Sbjct: 653 NCAVYAWGSNGKGQCGQG 670
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 283
V S G G G+LGHG + +I Q + V + G+ H+ + + G V +W
Sbjct: 3446 TVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G +G LGHGN E + PK++++L DV I VA G + V+S+DG+VY FG E L
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKL 3565
Query: 344 G 344
G
Sbjct: 3566 G 3566
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS AVTS G +Y++G G+LGHG + P ++SL + + A G+ T+
Sbjct: 486 AGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLA 545
Query: 110 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S D V++FG G+ +G T + PQ +E L++ + + A G F+ L+ G
Sbjct: 546 CSRDGNTVWSFGSGDNGKLGHG--NTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTG 603
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T WG + LG + + ++ L ++ I+ G + LAL AVY+
Sbjct: 604 EVFT--WGQGSNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALT---RNCAVYA 658
Query: 229 VGCGLGGKLGHGSRT 243
G G+ G G T
Sbjct: 659 WGSNGKGQCGQGHST 673
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A + G V+SFGS +G+LGHG T ++P+ I L+ +I + AAG ++
Sbjct: 539 GSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVA 598
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+V+ +G+ S G +++ + SP +VE L ++ ++G+ L+R
Sbjct: 599 LTCTGEVFTWGQGS----NLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNC 654
Query: 169 RVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
VY +WG++ + GH T P P ++ LE + QI+AG + +A P
Sbjct: 655 AVY--AWGSNGKGQCGQGHSTSPVS-RPSKVIN-LEGKQINQISAGTSHSVAWTTLP 707
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + Q A G L++ G+V+ +G++ G +G+ + + P LVE
Sbjct: 257 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 314
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G + T ++ +YT+ G N LGH T+ + P ++G+LE +
Sbjct: 315 LAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQ 374
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPV 262
V+ +A G + ALA S +Y+ G G G LGHG R +PR + QLL+ L+ +
Sbjct: 375 VLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLRTI 428
Query: 263 VVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V+ Q G ++ TWG G LGHGN+E +P V +L D
Sbjct: 429 KVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYN 488
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N +DG + L+
Sbjct: 489 FHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDGVIPCLV 532
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 148/279 (53%), Gaps = 23/279 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 107
G H+ A+TS +Y++G +SG LGHGT W P R + SL+G++++ A G +
Sbjct: 326 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 385
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
L + G++Y FG ++G +G + + V P+ V+ L + ++ A G + TA V
Sbjct: 386 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 443
Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 502
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ S +D P L+ Q +L+ ++ GA+H V+
Sbjct: 503 TT--SGH-VFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 557
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAI 314
V +WG G G LGHG+ E P +++AL D VK+I
Sbjct: 558 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSI 596
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
V +P+ +E+ + V Q A G A+++R+G V+T WG + RLGH + + PH
Sbjct: 254 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 310
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 252
L+ L V +A G + A+ S +Y+ G G+ G LGHG+ P+ +
Sbjct: 311 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 367
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
L LQ + VA G WH+A+ +G++ T+G G YG LGHG+ E P+ VQ L+ ++
Sbjct: 368 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 426
Query: 313 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGH 345
I VA G + T V+S+ G ++++G G+ LGH
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH 469
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 15/321 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H VT +G V+++G G+LGHG + RP + L + A G
Sbjct: 270 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 329
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 164
T I+ + +Y +G F G GT + ++V SL+ + V+ A G + +A+
Sbjct: 330 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 388
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
+ G++YTF G LGH + V P + L + +++A G + A+
Sbjct: 389 TSNGKLYTFGDGTYGVLGHGDRESVVYPRE-VQLLSGLRTIKVACGVWHTAAIVEVMSQT 447
Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
S +++ G G +LGHG++ P + N +A G +
Sbjct: 448 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQ--LACGHNMTVALTTS 505
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V T G YG LG+ + + +P +VQ L ++ G Y T V++ +V+S+G
Sbjct: 506 GHVFTMGGTAYGQLGNPSSDG-VIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 564
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LGH + D + +L+
Sbjct: 565 RGSNGRLGHGDVEDRKAPTLI 585
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +Y+FG + G LGHG E PR ++ L G+R I+ A G T I
Sbjct: 381 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 440
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + +++ +G +G + T L+ P V SL + Q A G+
Sbjct: 441 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 498
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG+ + + V P + L V +I+ G + + L
Sbjct: 499 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 555
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
S V+S G G G+LGHG D K P LIE + +++ + A+ H V G
Sbjct: 556 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 614
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECES 300
D VCT + R+ C G C S
Sbjct: 615 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 646
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 26/294 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT G +Y++G + G LGHG+ W P+ I ++GI + + G T
Sbjct: 358 GENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHT 417
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---L 164
++ GQ++ FG +FG +G + T P+ VE+L+ + ++ + G + TA +
Sbjct: 418 AAVTSVGQLFTFGDGTFGALGHGDHSS--ATVPREVETLRGLRTIRVSCGVWHTAAAVEI 475
Query: 165 SRE------------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ E G+++T+ G++ RLGH + + P ++ L + + Q+A G+
Sbjct: 476 TTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVA-LGDENICQVACGHN 534
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
LAL + VY++G G+LG+ R K P ++E ++ +A G++H A
Sbjct: 535 LTLALT---AAGRVYTMGSTSYGQLGN-PRATGKVPAIVEG-KIAGKIIEEIACGSYHVA 589
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V+ V TWG G G LGHG+ + + P VV L D + VA G T ++
Sbjct: 590 VLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAII 643
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G +L++ G+++++G++S G +G++ V +P+L+++
Sbjct: 289 PKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--VPNPKLIDT 346
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L + + A G T ++ G +YT WG+ A LGH +E + P + G +E
Sbjct: 347 LAGMNIELVACGENHTCAVTFSGDLYT--WGDGAYNCGLLGHGSEASHWIPKRIGGDMEG 404
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V ++ G + A+ S +++ G G G LGHG + PR +E L L+
Sbjct: 405 IHVSYVSCGPWHTAAVT---SVGQLFTFGDGTFGALGHGDHSSATVPREVE--TLRGLRT 459
Query: 262 VVVAAGAWHAAVVGQD---------------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+ V+ G WH A + G++ TWG G LGHG++E P+ V
Sbjct: 460 IRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVV 519
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
AL D VA G T ++ G VY+ G LG N A G+V +++
Sbjct: 520 ALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLG-NPRATGKVPAIV 569
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
+ D P+ +E +L++ +A G HA +V + G + +WG G LGHG +
Sbjct: 283 KVDAFLPKALESKVVLDVH--YIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPN 340
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK++ L + VA G+ T V+ GD+Y++G G
Sbjct: 341 PKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDG 377
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 139/304 (45%), Gaps = 23/304 (7%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGR 106
+AG H+ ++ S G VYS+G GQLG GT W R P+ + +I +G
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGDGT----WNTRTTPVMAKNLNHVIDIHSGVRS 94
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+M + G V+ +G + G+ G+ V +P V L I + + + LS
Sbjct: 95 SMALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSE 151
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G V+T+ ++ LG+ T P + G + V IAAG Y LAL + V
Sbjct: 152 NGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---V 205
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
++ G G+LG G+ TD P Q+ L V+ +AAG H+ + QDG V WG
Sbjct: 206 WAWGVNGSGELGDGTTTDRHVP-----VQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGN 260
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG G + P V+ L + A VA G Y + V G+V+S+G LG
Sbjct: 261 NTYGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDRAGNVWSWGDNSQQQLGL 318
Query: 346 NAIA 349
N+ A
Sbjct: 319 NSNA 322
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+ G V+++G+N +GQLG GT P + L GI+ I A M +S+ G
Sbjct: 95 SMALRQDGTVWTWGANENGQLGIGTITNVNAPAQVPGLSGIKAISGGL-AYHGMALSENG 153
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK+ GE G T SP LV L ++ + A G +++ L +G V+ +
Sbjct: 154 TVWTWGKNDNGELGNGT--TIQQNSPVLVAGLSDVTAIAA--GGYYSLALKSDGTVWAWG 209
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
LG T + P + G + V+ IAAG + LA+ + V++ G
Sbjct: 210 VNGSGELGDGTTTDRHVPVQVAGLTD---VMAIAAGGSHSLAIKQDGT---VWAWGNNTY 263
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G LG G+RT P Q+ NLQ +V VA G +H+ V + G V +WG LG
Sbjct: 264 GTLGDGTRTHRTRP-----VQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGL 318
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +P V + V+ I + G + + + +DG V+ +G +G
Sbjct: 319 NSNASSLIPVPVPGIEHVREI--SAGGFHSVAMKKDGTVWGWGYNSGGQIG 367
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ S G V+++G N SG+LG GTT + P + L + I AAG ++
Sbjct: 191 AGGYYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTDVMAI--AAGGSHSLA 248
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I G V+A+G +++G G + + T P V +L++I V A G + + + R G
Sbjct: 249 IKQDGTVWAWGNNTYGTLGDGTRTHR--TRPVQVRNLQHIVAV--AGGGYHSLAVDRAGN 304
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ SWG+++ +LG ++ + + P P+ G +E+ V +I+AG + +A+ + V+
Sbjct: 305 VW--SWGDNSQQQLGLNSNASSLIPVPVPG-IEH--VREISAGGFHSVAMKKDGT---VW 356
Query: 228 SVGCGLGGKLGHGSRTDEK 246
G GG++G G+ + +
Sbjct: 357 GWGYNSGGQIGDGTYNNTR 375
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG +H A + G V +WG+G G LG G + P + + LN V IH +G ++
Sbjct: 38 IVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
+ +DG V+++G E+ LG I +
Sbjct: 96 MALRQDGTVWTWGANENGQLGIGTITN 122
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 15 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 74
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 75 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 132
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 189
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 190 IYSFGLGGNGQLGTGSTSNRKSP 212
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 12/223 (5%)
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL
Sbjct: 3 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSL 61
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L + +
Sbjct: 62 LGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKI 118
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V I G + AL + V++ G G G+LGH S + E +PR + F+L+ +
Sbjct: 119 VYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQI 173
Query: 265 AAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 174 ACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 254
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G ++ P+LI+
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS- 60
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 61 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 119
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 154
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++SL +I +VQ A G + + LS+ V F WG + +LG + L+ +L
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
IP +Q+AAG + L SG A++ G G+LG D P L++ L + +
Sbjct: 63 GIPFMQVAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRSQK 117
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 319
V + G H A + ++G V T+G G YG LGH + E P+ V L +A G
Sbjct: 118 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 177
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
+T+ V G +YSFG G + LG
Sbjct: 178 QHTSAFVPSSGRIYSFGLGGNGQLG 202
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 68 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 127
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 128 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 185
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 186 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 218
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 11/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS G+LG G EEE PR + Q + QAA G T+L++ G++Y G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ G+ + PQ + +L+N V Q + G + L+ G++ FSWG++A
Sbjct: 63 NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + ++ ++ VVQI+ G+ + LAL + +++ G G+LG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT---NSGELFAWGANEYGQLGL 176
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G+ T +K P L + +A G H+ V + G + WG +G LG + +
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P ++ L + +++ GD + ++++G V++ G G LGH
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGH 281
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
QA G H++ +T G +Y+ G+N GQLGH T RP+ I +L+ + Q + G
Sbjct: 40 QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ +++ GQ++++G ++ G+ + + +P++++S+ VVQ + G+ L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G + F+WG + +LG T V L+ +L IP+ IA G + + A SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
A++ G G+LG +P ++ + L ++ ++ G + + Q+G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
G G +G LGHG E +P++V L K +A G +T V G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
+Q G HS+A+T+ G ++S+GSN++GQLGH + PR I+S+ ++Q + G
Sbjct: 92 TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++++G+++A+G + +G+ G G K+ T+ LV+SL I + A G + +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTA-TLVKSLAGIPIAFIACGGNHSFAV 210
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
S+ G + F WG + +LG + + P L TL ++ V I+ G + + L Q
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
G V++ G G G+LGHG+ +E PR++ F+L+ + +A G H A V G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
+Y +G GE G + V +P+ ++ + V QAA G T +L+++G++YT
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+ +LGH T + + LEN V Q++ G + LAL + ++S G G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119
Query: 236 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
+LGH PR+I+ + V ++ G H + G + WG YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177
Query: 295 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+ VP +V++L + +A G +F VS+ G ++ +G LG N +
Sbjct: 178 TTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ + + + Q A G L++ G+V+ +G++ G +G+ + + P LVE
Sbjct: 119 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 176
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G + T ++ +YT+ G N LGH T+ + P ++G+LE +
Sbjct: 177 LAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQ 236
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPV 262
V+ +A G + ALA S +Y+ G G G LGHG R +PR + QLL+ L+ +
Sbjct: 237 VLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLRTI 290
Query: 263 VVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V+ Q G ++ TWG G LGHGN+E +P V +L D
Sbjct: 291 KVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYN 350
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N +DG + L+
Sbjct: 351 FHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDGVIPCLV 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 148/279 (53%), Gaps = 23/279 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 107
G H+ A+TS +Y++G +SG LGHGT W P R + SL+G++++ A G +
Sbjct: 188 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 247
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
L + G++Y FG ++G +G + + V P+ V+ L + ++ A G + TA V
Sbjct: 248 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 305
Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 364
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ S +D P L+ Q +L+ ++ GA+H V+
Sbjct: 365 TT--SGH-VFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 419
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAI 314
V +WG G G LGHG+ E P +++AL D VK+I
Sbjct: 420 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSI 458
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 194
V +P+ +E+ + V Q A G A+++R+G V+T WG + RLGH + + PH
Sbjct: 116 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 172
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 252
L+ L V +A G + A+ S +Y+ G G+ G LGHG+ P+ +
Sbjct: 173 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 229
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
L LQ + VA G WH+A+ +G++ T+G G YG LGHG+ E P+ VQ L+ ++
Sbjct: 230 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 288
Query: 313 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGH 345
I VA G + T V+S+ G ++++G G+ LGH
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH 331
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 15/321 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H VT +G V+++G G+LGHG + RP + L + A G
Sbjct: 132 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 191
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 164
T I+ + +Y +G F G GT + ++V SL+ + V+ A G + +A+
Sbjct: 192 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 250
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
+ G++YTF G LGH + V P + L + +++A G + A+
Sbjct: 251 TSNGKLYTFGDGTYGVLGHGDRESVVYPRE-VQLLSGLRTIKVACGVWHTAAIVEVMSQT 309
Query: 219 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
S +++ G G +LGHG++ P + N +A G +
Sbjct: 310 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQ--LACGHNMTVALTTS 367
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V T G YG LG+ + + +P +VQ L ++ G Y T V++ +V+S+G
Sbjct: 368 GHVFTMGGTAYGQLGNPSSDG-VIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 426
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LGH + D + +L+
Sbjct: 427 RGSNGRLGHGDVEDRKAPTLI 447
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +Y+FG + G LGHG E PR ++ L G+R I+ A G T I
Sbjct: 243 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 302
Query: 111 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + +++ +G +G + T L+ P V SL + Q A G+
Sbjct: 303 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 360
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG+ + + V P + L V +I+ G + + L
Sbjct: 361 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 417
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
S V+S G G G+LGHG D K P LIE + +++ + A+ H V G
Sbjct: 418 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 476
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECES 300
D VCT + R+ C G C S
Sbjct: 477 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 508
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 10/301 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
A S VT G +Y G + G+LG G P IRSL ++I++ A G +
Sbjct: 1650 ANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLA 1709
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ +VYA+G +G A GV T V PQ + SL ++ G F +A LS+ G
Sbjct: 1710 LTEEKRVYAWGDGKWGNA--GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGD 1767
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV-VQIAAGYCYLLALACQPSGMAVYS 228
++ + ++ +LG T + + L+ + + V + A + +L P+ +++
Sbjct: 1768 LFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPN---LFT 1824
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G D ++ L + Q V + GA H A V Q G + TWG GR
Sbjct: 1825 CGLNANGQLGLGDFVDRSTLTAVD--ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRN 1882
Query: 289 GCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG + + VQ A+ + + V G T VVSE G++Y G + LG N
Sbjct: 1883 GQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGN 1942
Query: 347 A 347
+
Sbjct: 1943 S 1943
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 29/309 (9%)
Query: 62 GVVYSFGSNSSGQLGHGT----TEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
G +Y++G G+LGHG +EE + P+ I +L + ++ A G T ++D G+V
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
Y +GK + G+ G + PQLV+ L + V Q ++G A + + F WG
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF--FVWG 632
Query: 177 NDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
++ +LG H +P+ + +L + IA G + L + +V S G G
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEIT-SLREANIRSIACGGWHTL---ISTNTGSVMSCGKGW 688
Query: 234 GGKLGHG--------SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
G+LGHG S+T +++E F + V V+AG +A + GR+ TWG
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFI--VKVSAGKESSAAITNKGRLFTWGK 746
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGH + + E+ P+ V+ ++ + V+ GD + G YS+G G + LGH
Sbjct: 747 GDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGH 806
Query: 346 NAIADGQVC 354
G++C
Sbjct: 807 -----GEMC 810
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------ 168
V+ +G G+ G Q ++ P +V + +N+ V A+G T LS +G
Sbjct: 91 HVFMWGDGENGK--LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148
Query: 169 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPS 222
VY D L T ++ L L+ I +V IAAGY + LAL +
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLAL--NDT 206
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G ++S G G GKLG GS + + PR + Q N + V +A GA H A + G V T
Sbjct: 207 G-KIFSWGSGSWGKLGIGSDANAESPRFVASLQ--NSKVVHIACGAHHTAAITTVGDVWT 263
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G G LGH + + E P++ +L A + GD T V+ G +YS G
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323
Query: 343 LGHNAIADGQVCSLL 357
LG D + +L+
Sbjct: 324 LGLGDATDRIIPTLV 338
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 29/297 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGI-----RI 97
G H++ +++ GVV S GSN GQLG G E + + + LQ I I
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AAG ++ ++D G+++++G S+G + G+ SP+ V SL+N VV A G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWG--KLGIGSDANAESPRFVASLQNSKVVHIACG 248
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
TA ++ G V+T+ G +LGH + + P L +L +I G + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLVI 307
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG +YS+G G+LG G TD P L+ F N + + + A + +
Sbjct: 308 L--RSGQ-LYSMGANTHGQLGLGDATDRIIPTLVTGFA--NEKVIDIDAKGCRSIALTNT 362
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVY 333
G+V +G +P+ V L I VA + F +S+ G ++
Sbjct: 363 GKVFAFG-------NETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLF 412
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 29/308 (9%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEE------EWRPRPIRSLQGIRIIQAAAGAGRT 107
HS+A + G VY++G+ GQLG + + P+P+ +L+ I+ A G
Sbjct: 1224 HSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHN 1283
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
M ++ QV ++G FG+ G+ +PQ+V++L + G + +A +
Sbjct: 1284 MTLTSERQVLSWGAGEFGQ--LGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILES 1341
Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G++ WG + +LGH + P + L + + A + ++ +A +
Sbjct: 1342 GKI--LLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANK--- 1396
Query: 224 MAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
V+++G + G+LG SRT + P IE+ N+ VAAG H+ + G V
Sbjct: 1397 --VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNI--CQVAAGDQHSLALSVFGEVW 1452
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALN----DVKAIHVATGDYTTFVVSEDGDVYSFGC 337
+WG +G LGH + P + + DVK+I A G + +S G+V+++G
Sbjct: 1453 SWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSI--ACGYTFSAAMSAKGEVFTWGN 1510
Query: 338 GESASLGH 345
GES LGH
Sbjct: 1511 GESGELGH 1518
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 148/368 (40%), Gaps = 69/368 (18%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SL 92
L G A C+ + G HS A+ G + +G N GQLGHG T+ PR + L
Sbjct: 1320 LDGRAPCK-----ILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRL 1374
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
+G ++ A GA T+++ A +V+A G + G+ P +E L +
Sbjct: 1375 EG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNIC 1433
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAA 209
Q A G+ + LS G V+ SWG +LGH T + + P PLL + P V+ IA
Sbjct: 1434 QVAAGDQHSLALSVFGEVW--SWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIAC 1491
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL------------- 256
GY + A++ + V++ G G G+LGH + P LI+ F
Sbjct: 1492 GYTFSAAMSAKGE---VFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAG 1548
Query: 257 LNLQPVV---------------------VAAG-------------------AWHAAVVGQ 276
+ +P + +AAG A+ A+ +
Sbjct: 1549 IVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKR 1608
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG G LG + P ++Q+L +H++ + V++ G +Y G
Sbjct: 1609 HGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668
Query: 337 CGESASLG 344
E LG
Sbjct: 1669 GSEHGRLG 1676
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 20/293 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
G V+ +G ++ GQLG + P ++SL I+ +A + + ++D+G +Y G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGG 1669
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G G+ +P + SL + +++ A G + L+ E RVY +WG D +
Sbjct: 1670 SEHG--RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY--AWG-DGKW 1724
Query: 182 GHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
G+ + NDV L +L ++ + AG + AL+ ++ G G+LG
Sbjct: 1725 GNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGD---LFMWGKNSNGQLGL 1781
Query: 240 GSRT-DEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQ--DGRVCTWGWGRYGCLGHG 294
G+ + E P I NL VV V+ GA H+AV+ Q + T G G LG G
Sbjct: 1782 GTTSAAEDSPTKIS-----NLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLG 1836
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ S V AL+D + + + G T VS+ GD+ ++G G + LG A
Sbjct: 1837 DFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKA 1889
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 148/361 (40%), Gaps = 21/361 (5%)
Query: 6 AIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE--ACCRR-------ENSQAIAGPGHSI 56
+I + +A+ + K + GG +K L G C R E + A + +
Sbjct: 1114 SITGEIAKAKNDEKKARAGGPFKEYFNRLNIGRILQCLVRYSEKKHFEQIRDRANKRYEV 1173
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTMLISDAGQ 115
+ + +Y++G +G+LGHG P+ I S +I++ A G ++ S G
Sbjct: 1174 DLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGG 1233
Query: 116 VYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
VYA+G G+ + +PQ V +LK F++ A G + L+ E +V
Sbjct: 1234 VYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVL 1293
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
++ G +LG + P + P + G+ + A SG + G
Sbjct: 1294 SWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWH---SAAILESG-KILLWGK 1349
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
+ G+LGHG PR + Q+ L + GA H VV +V G G L
Sbjct: 1350 NVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQL 1408
Query: 292 GHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
G + ++VP ++ LN VA GD + +S G+V+S+G LGH I
Sbjct: 1409 GLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETIT 1468
Query: 350 D 350
D
Sbjct: 1469 D 1469
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ +TS+ V S+G+ GQLG + P+ +++L G + G + I ++
Sbjct: 1282 HNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILES 1341
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRVYT 172
G++ +GK+ +G+ +G TK ++P++ + L+ V A +G T V+ +V+
Sbjct: 1342 GKILLWGKNVYGQLGHG--DTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFA 1399
Query: 173 FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
D +LG + P+ + L + Q+AAG + LAL+ V+S G
Sbjct: 1400 MGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGE---VWSWGG 1456
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LGH + TD+ P + + + +A G +A + G V TWG G G L
Sbjct: 1457 SPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGEL 1516
Query: 292 GHGNEECESVPKVVQALNDVKAI 314
GH + P +++ ++V I
Sbjct: 1517 GHAPKVLTYAPSLIKDFSEVVQI 1539
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRP--IRSLQGIRIIQAAA 102
Q G H+ T + +GSN+ GQLG H ++ + P P I SL+ I A
Sbjct: 611 QISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISS---YMPDPYEITSLREANIRSIAC 667
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL------VESLKNIFVVQAAI 156
G T++ ++ G V + GK G+ +G + S L VE + F+V+ +
Sbjct: 668 GGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSA 727
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G +A ++ +GR++T+ G++ +LGH + N+ P + I VV ++ G ++LA
Sbjct: 728 GKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPRE-VEFFAKIRVVDVSIGDSHMLA 786
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLI 251
L SG+ YS G G G+LGHG + E PR I
Sbjct: 787 L--DYSGLP-YSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G ++S+GS S G+LG G+ PR + SLQ +++ A GA T
Sbjct: 195 AGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAA 254
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ G V+ +GK G + G + K SP+L SL+ + G+ T V+ R G+
Sbjct: 255 ITTVGDVWTWGKGLRG--QLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQ 312
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+Y+ +LG + + P + G N V+ I A C +AL
Sbjct: 313 LYSMGANTHGQLGLGDATDRIIPTLVTG-FANEKVIDIDAKGCRSIALT 360
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 56/331 (16%)
Query: 39 ACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
A R+ +Q I G H++ + G +YS G+N+ GQLG G + P + ++
Sbjct: 287 ASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKV 346
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAI 156
I A R++ +++ G+V+AFG ++ L P+ V L K+ ++ A
Sbjct: 347 IDIDAKGCRSIALTNTGKVFAFGNET---------EPHLNRIPRFVAGLPKSDLIIAVAR 397
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLL 215
F +S G++ F W ++ E +L + I VV++ G+ + +
Sbjct: 398 TAHFDFAISDTGQL--FRW--------RPFSSEEESSRMLESFHAIKGVVRMFCGHNH-M 446
Query: 216 ALACQPS-----GMAVYSVGCGLGGKLGHGSRTDEKHP------------RLIEQFQLLN 258
A+ C P M + + S EK P +++F +
Sbjct: 447 AVICSPEMGCTQAMISRNKSTSFSSDISRASL--EKFPSEKILPALGTNTEYLDEFATVQ 504
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-----NEECESVPKVVQALNDVKA 313
++ G DG + T+G G +G LGHG +EE PK ++ L +
Sbjct: 505 VRDSPSREG---------DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSV 555
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +++ G VY++G LG
Sbjct: 556 VFIACGKDSTAALTDTGKVYTWGKSAQGKLG 586
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTM 108
G + A+T G VY++G ++ G+LG G+ + P+ ++ L + Q + G
Sbjct: 561 GKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620
Query: 109 LISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+D + + +G ++FG + G+ + + P + SL+ + A G + T + +
Sbjct: 621 CSTDMHKFFVWGSNTFG--QLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT 678
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQIAAGYCYLLALACQ 220
G V + G +LGH + L + I +V+++AG A+ +
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+++ G G +LGH S +E +PR +E F ++ V V+ G H + G
Sbjct: 739 GR---LFTWGKGDEYQLGHESSKNEAYPREVEFFA--KIRVVDVSIGDSHMLALDYSGLP 793
Query: 281 CTWGWGRYGCLGHGNE-ECESVPKVV 305
+WG G G LGHG E E++P+ +
Sbjct: 794 YSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L E +YT+ G + RLGH P + N +V++A G + LA +
Sbjct: 1175 LEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG-- 1232
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVV 274
VY+ G G G+LG D ++ N QPV+ +A G WH +
Sbjct: 1233 -GVYAWGAGDRGQLGSLENFD-----CVKINYAFNPQPVLNLKRYFILSIACGRWHNMTL 1286
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ +V +WG G +G LG + + P++V+AL+ + G + + + E G +
Sbjct: 1287 TSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILL 1346
Query: 335 FGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
+G LGH D + CS + QYL++
Sbjct: 1347 WGKNVYGQLGH---GDTKSCSA--PRVNQYLRL 1374
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 10/230 (4%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTM 108
AG HS A++ G ++ +G NS+GQLG GTT E P I +L G+ ++ + GA +
Sbjct: 1754 AGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSA 1812
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ F + G+ ++ V++L + +V A+ G TA +S+ G
Sbjct: 1813 VLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYG 1872
Query: 169 RVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS-GMAV 226
+ T+ G + +LG D+E L + N P+V++ G + ++ + MA
Sbjct: 1873 DLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAG 1932
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVG 275
Y GLG G+ SR E E L +QP +A G+ H A+VG
Sbjct: 1933 YESTIGLG---GNSSRRREFDVSFREVEGL--IQPTQIAVGSVHVLALVG 1977
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 42 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--------EWRPRPIRSL 92
R N ++IA G H++ T+ G V S G GQLGHG E + + +
Sbjct: 658 REANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGF 717
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
I++ +AG + I++ G+++ +GK E + G + +K P+ VE I VV
Sbjct: 718 GDSFIVKVSAGKESSAAITNKGRLFTWGKGD--EYQLGHESSKNEAYPREVEFFAKIRVV 775
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL 196
+IG+ L G Y++ G+ +LGH + P P++
Sbjct: 776 DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIM 820
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G V+ G G GKLG+ S + P ++ F+ N+ V A G H + DG V +
Sbjct: 89 GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFR--NVLVKVCALGKQHTLFLSADGVVLS 146
Query: 283 WGWGRYGCLGHGN---------------EECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G YG LG G+ + + + ++Q+LN++ + +A G Y + ++
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI--VGIAAGYYHSLALN 204
Query: 328 EDGDVYSFGCGESASLGHNAIADGQ 352
+ G ++S+G G LG + A+ +
Sbjct: 205 DTGKIFSWGSGSWGKLGIGSDANAE 229
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 165 SREGRVYTFSWGNDA--RLGH---HTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 218
SREG Y +++G RLGH +T + HP + TL + VV IA G AL
Sbjct: 510 SREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALT 569
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVV---AAGAWHAAVV 274
VY+ G GKLG GS P I QL+ +L VV + G HAA
Sbjct: 570 ---DTGKVYTWGKSAQGKLGLGS----GKPLAIVVPQLVQDLSSHVVCQISLGRNHAACS 622
Query: 275 GQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+ WG +G LG H + P + +L + +A G + T + + G V
Sbjct: 623 TDMHKFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIRSIACGGWHTLISTNTGSV 681
Query: 333 YSFGCGESASLGH 345
S G G LGH
Sbjct: 682 MSCGKGWHGQLGH 694
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 32/69 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
Q V WG G G LG+ +EE + VP +V A +V A G T +S DG V S
Sbjct: 88 QGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147
Query: 336 GCGESASLG 344
G LG
Sbjct: 148 GSNVYGQLG 156
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 26/328 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+ +T+ G +SFGSN GQLGHG T+ PR +++L+ R I A G T++
Sbjct: 50 GDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVA 109
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D +VYAFG +S E + GV+ + PQLV +L + V G + LS +G
Sbjct: 110 TDDKKVYAFGINS--EHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGI 167
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
VY + +LG + P L + I + A Y+ + +Y+
Sbjct: 168 VYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYV------NTDGVLYTF 221
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGR 287
G GKLG T+ + + ++ ++Q +V VA G H + DGR ++G G
Sbjct: 222 GETEHGKLG----TNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGS 277
Query: 288 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG G + P ++Q VK V+ G T +SE +Y+ G G L
Sbjct: 278 QGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--- 334
Query: 347 AIADGQVCSLLF-------LSIFQYLQI 367
A+ DG++ S F LS+FQ Q+
Sbjct: 335 ALEDGEMGSNKFSPMLVDILSLFQVQQV 362
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 29/258 (11%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+I A G ++ I+ +G+ ++FG + +G+ +G TK + +P+ V++LK+ + A
Sbjct: 44 VISVACGDQHSVFITASGRTFSFGSNDYGQLGHG--HTKALVNPRCVKALKDKRAILVAC 101
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAG 210
G T V + + +VY F ++ +LG +H +P L+ TL + V + AG
Sbjct: 102 GRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQ------LVATLNGVQVKALTAG 155
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ LAL+ + VY G G+LG G + K P ++ + + ++AGA+H
Sbjct: 156 ADHSLALSAKG---IVYLWGSSEHGQLGLGRKKQRKLPVQLKT----EGKAIAISAGAYH 208
Query: 271 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKV--VQALNDVKAIHVATGDYTTFVV 326
+A V DG + T+G +G LG ++C KV +Q L VA G T +
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL----VTSVACGGSHTVAL 264
Query: 327 SEDGDVYSFGCGESASLG 344
+ DG YSFG G LG
Sbjct: 265 TCDGRAYSFGDGSQGQLG 282
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+++KG+VY +GS+ GQLG G ++ R P++ + I +AGA +
Sbjct: 154 AGADHSLALSAKGIVYLWGSSEHGQLGLG--RKKQRKLPVQLKTEGKAIAISAGAYHSAY 211
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ G +Y +FGE E+G GT L P V ++ + V A G T L+
Sbjct: 212 VNTDGVLY-----TFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALT 265
Query: 166 REGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+GR Y+F G+ +LG PH L+ + + +++AG + L+ G
Sbjct: 266 CDGRAYSFGDGSQGQLGLGQRVTHAGRPH-LIQMPTGVKMARVSAGQSHTAFLS---EGR 321
Query: 225 AVYSVGCGLGGKLG--HGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+Y+ G G GKL G K P L++ L +Q V+ G H V+
Sbjct: 322 QMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQ--VSCGGCHTLVL 372
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
F + N + VA G H+ + GR ++G YG LGHG+ + P+ V+AL D +A
Sbjct: 37 FWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRA 96
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
I VA G T V ++D VY+FG LG
Sbjct: 97 ILVACGRSHTLVATDDKKVYAFGINSEHQLG 127
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 160/353 (45%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
+ + KP+ +A LK G W + + C E Q I + +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A +G VY G G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 160/353 (45%), Gaps = 26/353 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSI 56
+ + KP+ +A LK G W + + C E Q I + +
Sbjct: 14 REKLTKPV-QATLSSLKMLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVL 64
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQ 115
T ++ G+N G LG G + PR + SL G +I + G+G +L + G+
Sbjct: 65 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 124
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + +
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
N ++G + N P + G L+N VV IA G + +A +G VY G G
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNG 240
Query: 236 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN
Sbjct: 241 QLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298
Query: 296 EECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 KSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLK 147
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 40 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLN 96
Query: 148 NIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V
Sbjct: 97 GKKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++A G + L L S V++ G G++G GS ++ PR + L N V +
Sbjct: 155 IEVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTI 210
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G V G V WG+ G LG GN + P V AL ++ VA G T
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 325 VVSEDGDVYSFGCGESASLG 344
V++++G VY++G LG
Sbjct: 271 VLTDEGQVYAWGANSYGQLG 290
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 269 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293
Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
+ H +A Q G V WG R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLK 147
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 16 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLN 72
Query: 148 NIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V
Sbjct: 73 GKKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 130
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++A G + L L S V++ G G++G GS ++ PR + L N V +
Sbjct: 131 IEVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTI 186
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G V G V WG+ G LG GN + P V AL ++ VA G T
Sbjct: 187 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 246
Query: 325 VVSEDGDVYSFGCGESASLG 344
V++++G VY++G LG
Sbjct: 247 VLTDEGQVYAWGANSYGQLG 266
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 144/303 (47%), Gaps = 22/303 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ G V+++G+N GQLG G T+ P + L G+ + AAG T+
Sbjct: 166 AGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGV--VALAAGFDFTLA 223
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ + G V A+G + G+ G +L SP V L I V+A G + L ++G
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDGTSTQRL--SPVKVSELSGITEVRA--GTYHALALGKDGG 279
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+T WG++A +LG T + P + G LE + V +LA +G AV+
Sbjct: 280 VWT--WGSNASGQLGDGTWNDRAVPMQVPG-LERVKAVA----SMDSDSLALLDTG-AVF 331
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G TD P + + V GA HA V+ +DG + WG G
Sbjct: 332 AWGANGSGQLGDGDTTDRATPGPVPGLNAV----ASVVGGAQHALVLRKDGTLWAWGGGL 387
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LGHG E VP V L V ++ ATG + + DG V+++G LG +
Sbjct: 388 SGQLGHGGSERHVVPAPVMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGS 445
Query: 348 IAD 350
A+
Sbjct: 446 TAE 448
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV G V+++G N++GQLG GTT + RP + L + + AAG + +
Sbjct: 470 HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAV--AAGGSHVLALRSD 527
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G ++ G+ G +L +P V L + V A G++F+ L +G V+T+
Sbjct: 528 GSVWAWGYNALGQLGDGTTVDRL--TPVRVSGLGAVVAVAA--GSYFSMALQSDGTVWTW 583
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
G + +LG + P + G L NI ++AAG + ALA + G V++ G
Sbjct: 584 GEGFEGQLGDGGGVQRLSPVRVEG-LANI--TRVAAGSAH--ALAVRGDGT-VWAWGDNG 637
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG GS D P + Q + V+ G H+ + DG V WG+ YG LG
Sbjct: 638 EGQLGDGSWADRFRPVQVPGLQGIT----AVSGGRSHSMALQGDGTVRAWGYNGYGQLGD 693
Query: 294 GNEECESVPKVVQALNDVKAIH 315
G P ++ L ++A+H
Sbjct: 694 GTLTSRVRPALIPGLTGIQALH 715
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 26/302 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
AG H +A+++ G V+++G N+ GQLG G++ W PR + L+G+ + AAG T
Sbjct: 1016 AGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMW-PRQVPELRGVEAV--AAGEQFT 1072
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA--AIGNFFTAVLS 165
+ + G A+G + +G+ G G +L +E K V+ A G +S
Sbjct: 1073 VAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMS 1132
Query: 166 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+G V T WG++ +LG T P + G VV +++G + LAL +
Sbjct: 1133 -DGTVQT--WGDNTFGQLGDGTTTRRAVPLTVYGLAS---VVAVSSGAWHSLALLSDGT- 1185
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
V++ G G+LG G+ T P Q+ L VV + +G +HA V DG V T
Sbjct: 1186 --VWAWGANGFGQLGDGTSTPRTRP-----VQVAGLGDVVAIGSGGYHALAVCSDGSVWT 1238
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG+ +G LG G E S+P V+ L V + VA GD+ + + DG + ++G S
Sbjct: 1239 WGYNAFGQLGDGTAESRSLPTRVEGLEGV--VAVAGGDHYSLALHSDGTLSAWGNNASGQ 1296
Query: 343 LG 344
LG
Sbjct: 1297 LG 1298
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 146/309 (47%), Gaps = 27/309 (8%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
N+ A+A G H++AV G ++++G+N SGQLG G T P ++ L+ R+ AA
Sbjct: 909 SNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE--RVASVAA 966
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ + D G +A+G + G+ G + V P V SLK I + A G
Sbjct: 967 GRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSV--PNQVTSLKGIRAMSA--GAHHVV 1022
Query: 163 VLSREGRVYTFSWGND--ARLGH-HTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLAL 217
LS +G V+T WG++ +LG + P + P P L +E +AAG + +A+
Sbjct: 1023 ALSADGTVWT--WGDNTLGQLGDGSSSPTGMWPRQVPELRGVE-----AVAAGEQFTVAV 1075
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAVVG 275
+ A G G+LG G + P + + + ++P V AW HA V
Sbjct: 1076 LLDGTARA---WGSNEYGQLGDGKTGPQLTPMAV-KIEGPKIRPPVRTVRAWGQHAVVQM 1131
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V TWG +G LG G +VP V L V + V++G + + + DG V+++
Sbjct: 1132 SDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASV--VAVSSGAWHSLALLSDGTVWAW 1189
Query: 336 GCGESASLG 344
G LG
Sbjct: 1190 GANGFGQLG 1198
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 138/302 (45%), Gaps = 26/302 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+AV G +++G+N SGQLG GT P + SL+GIR + +AGA +
Sbjct: 966 AGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAM--SAGAHHVVA 1023
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S G V+ +G ++ G+ G + P+ V L+ + V A G FT + +G
Sbjct: 1024 LSADGTVWTWGDNTLGQLGDGSS-SPTGMWPRQVPELRGVEAVAA--GEQFTVAVLLDGT 1080
Query: 170 VYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+WG+ D + G P V+ + G PV + A + + Q S
Sbjct: 1081 AR--AWGSNEYGQLGDGKTGPQLTPMAVK---IEGPKIRPPVRTVRAWGQHAV---VQMS 1132
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V + G G+LG G+ T P + + L ++ V V++GAWH+ + DG V
Sbjct: 1133 DGTVQTWGDNTFGQLGDGTTTRRAVPLTV--YGLASV--VAVSSGAWHSLALLSDGTVWA 1188
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG +G LG G + P V L DV AI +G Y V DG V+++G
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGDVVAI--GSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Query: 343 LG 344
LG
Sbjct: 1247 LG 1248
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 66/353 (18%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
++ AG H++AV G V+++G N GQLG G+ + +RP + LQGI + + G
Sbjct: 612 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQGITAV--SGGRS 669
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---------------- 149
+M + G V A+G + +G+ G +++ P L+ L I
Sbjct: 670 HSMALQGDGTVRAWGYNGYGQLGDGTLTSRV--RPALIPGLTGIQALHPSHLHVLALHAD 727
Query: 150 --------------------------------FVVQAAIGNFFTAVLSREGRVYTFSWGN 177
V + ++G T ++ +G V +
Sbjct: 728 GTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENG 787
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+LG T + P + G +P V+ +A+G + LALAC + V++ G G+
Sbjct: 788 SGQLGDGTSTHRTGPVSVPG----VPCVRSVASGIQHSLALACDGT---VWAWGANARGQ 840
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
LG G+ T P L+E + + V +AAG + + DG V +WG G LG G
Sbjct: 841 LGDGTTTPRVTPGLVEGLRGV----VALAAGGDASVALRADGSVWSWGGNASGQLGDGTL 896
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
++P V+ L++ A+ VA G+ V EDG ++++G S LG A
Sbjct: 897 TDRALPAHVEHLSN--AVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTA 947
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 22/304 (7%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+ G H++ + G ++++G SGQLGHG +E P P+ L G+ + A G+ ++
Sbjct: 365 VGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSM--ATGSFHSL 422
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
G V+A+G++++G + G T + VE L + V +A + + +G
Sbjct: 423 AALGDGSVWAWGRNTYG--QLGDGSTAERHAAVRVEGLGGVRSVASAA--HHSLAVGMDG 478
Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+ +WG +A +LG T + P + G V +AAG ++LAL S V
Sbjct: 479 TVW--AWGRNAAGQLGDGTTLDRARPVAVPGLTS---VTAVAAGGSHVLALRSDGS---V 530
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
++ G G+LG G+ D P + + V VAAG++ + + DG V TWG G
Sbjct: 531 WAWGYNALGQLGDGTTVDRLTPVRVSGLGAV----VAVAAGSYFSMALQSDGTVWTWGEG 586
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LG G P V+ L ++ VA G V DG V+++G LG
Sbjct: 587 FEGQLGDGGGVQRLSPVRVEGLANI--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG 644
Query: 347 AIAD 350
+ AD
Sbjct: 645 SWAD 648
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 18/295 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ S G V+++G+N GQLG GT+ RP + L ++ +G + +
Sbjct: 1176 HSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLG--DVVAIGSGGYHALAVCSD 1233
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G ++FG+ G ++ + P VE L+ + V A G+ ++ L +G +
Sbjct: 1234 GSVWTWGYNAFGQLGDGTAESRSL--PTRVEGLEGVVAV--AGGDHYSLALHSDGTLS-- 1287
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+WGN+A G + + + VV + AG + +AL + V++ G
Sbjct: 1288 AWGNNAS-GQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGT---VWTWGDNA 1343
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G+ RL+ + + NL V V AGA H V G V TWG +G LG
Sbjct: 1344 FGQLGDGASGTRM--RLVPR-PVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLG 1400
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G+ + P V+ L+DV V+ G + + DG V S+G SLG A
Sbjct: 1401 LGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGSSLYGSLGLGA 1453
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 31/308 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ ++ G V+++G N SGQLG T + P+R I+ +G ++
Sbjct: 65 AGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQ-GLAPVRLAALENIVSVVSGDAHSLA 123
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+ +G +S G+ G T +P V L ++ V A G+F + L +G
Sbjct: 124 LGADGSVWTWGGNSSGQLGDGT--TTDRATPMRVAGLDSVVAVAA--GDFHSLALREDGT 179
Query: 170 VYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPS 222
V+ +WG + +LG HT+P T E +P VV +AAG+ + LA+ +
Sbjct: 180 VW--AWGTNFHGQLGRGHTQPGL--------TPEQVPGLNGVVALAAGFDFTLAVLEDGT 229
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V + G G+LG G+ T P + + + V AG +HA +G+DG V T
Sbjct: 230 ---VRAWGSNGSGQLGDGTSTQRLSPVKVSELSGIT----EVRAGTYHALALGKDGGVWT 282
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LG G +VP V L VKA VA+ D + + + G V+++G S
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGSGQ 340
Query: 343 LGHNAIAD 350
LG D
Sbjct: 341 LGDGDTTD 348
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++AV S G V+++G N+ GQLG GT E P + L+G+ + A G ++ +
Sbjct: 1226 HALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGV--VAVAGGDHYSLALHSD 1283
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G + A+G ++ G+ G T+ V VV G T L +G V+T
Sbjct: 1284 GTLSAWGNNASGQLGDGTGTTRY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWT- 1338
Query: 174 SWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
WG++A +LG + P P+ L ++ V A + + +AL V++
Sbjct: 1339 -WGDNAFGQLGDGASGTRMRLVPRPVP-NLSSVSAVGAGARHTFAVALKGT-----VWTW 1391
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G T+ P + + + VV+ GA + + +DG V +WG YG
Sbjct: 1392 GRNSHGQLGLGDNTNRTEPLRVRELSDVT----VVSGGADFSLAMKRDGTVLSWGSSLYG 1447
Query: 290 CLGHGNEECESVPKVV 305
LG G S P V
Sbjct: 1448 SLGLGATGHRSSPGQV 1463
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 44 ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
E A+AG H S+A+ S G + ++G+N+SGQLG GT R + ++ A
Sbjct: 1265 EGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT--RYSRVAVKGVDGVVDVRA 1322
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
GA T+ + G V+ +G ++FG+ G GT++ P+ V +L ++ V A + F
Sbjct: 1323 GATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFAV 1382
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L +G V+T+ + +LG N EP L E V ++ G + LA+ +
Sbjct: 1383 AL--KGTVWTWGRNSHGQLGLGDNTNRTEP---LRVRELSDVTVVSGGADFSLAMKRDGT 1437
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHP 248
V S G L G LG G+ P
Sbjct: 1438 ---VLSWGSSLYGSLGLGATGHRSSP 1460
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 23/257 (8%)
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGE---AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
++ AAG ++ +S G V+A+G + G+ AE +QG +P + +L+NI V +
Sbjct: 61 MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGL----APVRLAALENIVSVVS 116
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G+ + L +G V+T+ + +LG T + P + G L++ VV +AAG +
Sbjct: 117 --GDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAG-LDS--VVAVAAGDFHS 171
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAV 273
LAL + V++ G G+LG G P L EQ LN V +AAG
Sbjct: 172 LALREDGT---VWAWGTNFHGQLGRG----HTQPGLTPEQVPGLN-GVVALAAGFDFTLA 223
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
V +DG V WG G LG G P V L+ + + T Y + +DG V+
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGT--YHALALGKDGGVW 281
Query: 334 SFGCGESASLGHNAIAD 350
++G S LG D
Sbjct: 282 TWGSNASGQLGDGTWND 298
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 11/307 (3%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+VY +GSNSS QL GT E+ +P+ + ++I+A G T +S G V A GK
Sbjct: 371 MVYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAVKACGKG 428
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARL 181
S+G G + + ++E + + V ++ G + T ++ EG V+++ G+ +L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
GH P + G L VV ++AGY + A+ + +Y+ G G G+LGH
Sbjct: 489 GHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT---NDGELYTWGEGDFGRLGHSD 545
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECES 300
P L++ + VA G+ H V QDGR+ ++G G G LGHG+
Sbjct: 546 SHSRNVPTLVKDISGVG----QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVY 601
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLS 360
PKV++AL+ V G ++ ++ G V+++GCG G + + + LS
Sbjct: 602 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRLIEELS 661
Query: 361 IFQYLQI 367
I + + I
Sbjct: 662 ITKIIDI 668
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 153/293 (52%), Gaps = 18/293 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAAAGA-GR 106
AG + +V++ G V + G S G+LG G + + P+ + + +R + ++ G+ G
Sbjct: 408 AGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH 467
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLS 165
T+ ++ G+V+++G +G+ +G T+ P++++ L VV + G +A ++
Sbjct: 468 TLAVTAEGEVFSWGDGDYGKLGHGNSATQ--KYPKIIQGPLLGKVVVCVSAGYRHSAAVT 525
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGM 224
+G +YT+ G+ RLGH +D + +++I V Q+A G + +A+A G
Sbjct: 526 NDGELYTWGEGDFGRLGH----SDSHSRNVPTLVKDISGVGQVACGSSHTIAVA--QDGR 579
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G GKLGHG P++IE ++ V AG+ + + G+V WG
Sbjct: 580 IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAGQVFAWG 637
Query: 285 WGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G CLG G+ E S+ P++++ L+ K I ++ GD +S + +V+++G
Sbjct: 638 CG--SCLGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWG 688
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D VY +G +S + G + + P+L + + +++A G + T +S +G V
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGT--LEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAV 422
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLL----GTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G+ RLG N P L+ T+ + + + G+ LA G V
Sbjct: 423 KACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH----TLAVTAEG-EV 477
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+S G G GKLGHG+ +K+P++I Q LL V V+AG H+A V DG + TWG G
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKII-QGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEG 536
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGH 345
+G LGH + +VP +V+ ++ V VA G T V++DG V+SFG G++ LGH
Sbjct: 537 DFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH 594
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
R+ S + GH++AVT++G V+S+G G+LGHG + + P+ I+ L G ++ +
Sbjct: 456 RKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVS 515
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +++ G++Y +G+ FG + ++ V P LV+ + V Q A G+ T
Sbjct: 516 AGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNV--PTLVKDISG--VGQVACGSSHT 571
Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
++++GR V++F G++ +LGH + N V ++ L + ++ AG LAL
Sbjct: 572 IAVAQDGRIVWSFGGGDNGKLGH-GDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALT-- 628
Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S V++ GCG LG GS T PRLIE+ + + + ++ G H + +
Sbjct: 629 -SAGQVFAWGCG--SCLGCGSSETTSLRPRLIEELSITKI--IDISCGDSHCLALSHENE 683
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
V WG G G G+ + PK V L V + G
Sbjct: 684 VFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAG 724
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 47 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H+IAV G +V+SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 563 QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 622
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ AGQV+A+G S G G+ TS P+L+E L ++ + G+
Sbjct: 623 SSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRLIEELSITKIIDISCGDSHCLA 677
Query: 164 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
LS E V F+WGN+A +G HT +P ++G LE + + QI AG + LA
Sbjct: 678 LSHENEV--FAWGNNA-MGQCGQGHTSTPVTKPKKVIG-LEGVSIQQITAGTSHSLAWTA 733
Query: 220 QPS 222
P+
Sbjct: 734 VPT 736
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG +E + RP+ I LQG ++Q A G + +++
Sbjct: 3955 GHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G+++ FG G K++ P+ V +L + Q IG
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMI--PERVTALDGHHIGQRLIGL-------------- 4058
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
DA L +H P ++ LE + + IA G ++LAL+ + VY+ GC
Sbjct: 4059 ----PDAMLKNHNRPQ------IIPALEGVFIEDIAVGCEHILALS---NTGDVYAWGCN 4105
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+LG G K P L+ Q N++ ++AG H++
Sbjct: 4106 CEAQLGLGHSNPVKEPILVTTLQGKNIR--QISAGRCHSS 4143
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV--------QIAAGY-CYLLALA 218
G+ + WGN G H + D GT ++P + Q+ G C L
Sbjct: 3858 GKSEVYLWGN----GRHGQLADA------GTSASVPTLAPSLSQTQQVVCGQNCTFLV-- 3905
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQD 277
Q +G V +VG G G+LG G+ D P +I Q + +V + G+ H+ + +
Sbjct: 3906 -QANG-TVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V +WG G YG LGHGN E + PK ++ L + + +A G + VV+ DG +++FG
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGS 4023
Query: 338 GESASLGHNAIADGQV 353
G+S LG + ++ +
Sbjct: 4024 GDSGRLGQRSTSNKMI 4039
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 41/261 (15%)
Query: 115 QVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
+VY +G G+ A+ G + +P L ++ Q G T ++ G V
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSLSQT------QQVVCGQNCTFLVQANGTVLAV 3914
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCG 232
G+ RLG +D+ ++ L+ V Q+ Y +LA +G V+S G G
Sbjct: 3915 GEGSYGRLGQGNS-DDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETG-EVFSWGDG 3972
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
GKLGHG+ ++ P+ IE Q + V +A G H+AVV DG++ T+G G G LG
Sbjct: 3973 DYGKLGHGNSERQRRPKQIEGLQ--GEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLG 4030
Query: 293 HGNEECESV-----------------------------PKVVQALNDVKAIHVATGDYTT 323
+ + + P+++ AL V +A G
Sbjct: 4031 QRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHI 4090
Query: 324 FVVSEDGDVYSFGCGESASLG 344
+S GDVY++GC A LG
Sbjct: 4091 LALSNTGDVYAWGCNCEAQLG 4111
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G HS VT+ G +++FGS SG+LG +T + P + +L G I Q G
Sbjct: 3998 EVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIG 4057
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
ML K PQ++ +L+ +F+ A+G
Sbjct: 4058 LPDAML-------------------------KNHNRPQIIPALEGVFIEDIAVGCEHILA 4092
Query: 164 LSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
LS G VY + +A+LG H+ P V+ L+ TL+ + QI+AG C+
Sbjct: 4093 LSNTGDVYAWGCNCEAQLGLGHSNP--VKEPILVTTLQGKNIRQISAGRCH 4141
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 123
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 182
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 239
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 298 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 351
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 156 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 216 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 273
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 320
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 12/259 (4%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
LQ IR AG +L + +++ G + G G+ + P+ ++SL
Sbjct: 45 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC--LGLGDVQSTIEPRRLDSLNG 102
Query: 149 IFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVV 205
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V+
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 160
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
++A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 161 EVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIA 216
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
G V G V WG+ G LG GN + P V AL ++ VA G T V
Sbjct: 217 CGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 276
Query: 326 VSEDGDVYSFGCGESASLG 344
++++G VY++G LG
Sbjct: 277 LTDEGQVYAWGANSYGQLG 295
>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
Length = 409
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 107
AG HS VT+ G +Y++G G+LGH +E++ +P+ + +LQG R++ A G+G +T
Sbjct: 2 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 61
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++D V+++G +G + G G+ P ++SL + VV+ G+ F+ L++
Sbjct: 62 LCLTDDDTVWSWGDGDYG--KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 119
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+ RLGH ++ + P + G L+ V+ IA G L + C G VY
Sbjct: 120 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG--SLHCVCCTEDG-EVY 175
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ G G+LG G+ + PRL+ Q
Sbjct: 176 TWGDNDEGQLGDGTTNAIQRPRLVAALQ 203
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDA 59
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 60 QTL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVAL 116
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY+
Sbjct: 117 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 176
Query: 335 FGCGESASLGH---NAI 348
+G + LG NAI
Sbjct: 177 WGDNDEGQLGDGTTNAI 193
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--N 158
AAG + ++ AG +Y +GK +G + +L P+LVE+L+ VV A G +
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGD 58
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T L+ + V+++ G+ +LG P + +L + VV++ G + +AL
Sbjct: 59 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALT 117
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG AVY+ G G +LGHGS + PR ++ Q + + +A G+ H +DG
Sbjct: 118 --KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDG 172
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V TWG G LG G P++V AL K VA G T S
Sbjct: 173 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+T G VY++G +LGHG+ + RPR ++ LQG ++I A G+ + ++ G
Sbjct: 113 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG 172
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+VY +G + E + G T + P+LV +L+ V + A G+ T S
Sbjct: 173 EVYTWGDND--EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221
>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
Length = 429
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 149/325 (45%), Gaps = 51/325 (15%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
S+A G+V G GQLG G E RP ++ L + IQ A G T+ ++ A
Sbjct: 30 SLASDEAGIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKA 89
Query: 114 GQVY--------AFGKDS--FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G++Y A G+D+ EAEY P LV+ L N+ ++Q + G+ TA
Sbjct: 90 GEIYTWGCNDECALGRDTSDTSEAEY---------LPGLVDGLDNVKIIQVSAGDNHTAA 140
Query: 164 LSREGRVYTFS--WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L+ +GRV+ + W N +G + P +LG N PV++I +G ++ AL
Sbjct: 141 LADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGD-PNDPVIKIGSGNNHVAALTA-- 197
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV---------------VA 265
+G+ +++ GCG G+LG R E+ R Q LQP V +
Sbjct: 198 NGL-IFTWGCGEQGQLG---RVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIF 253
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL------NDVKAIHVATG 319
G ++ V G V G YG +G+GN + +L ND + I +A+G
Sbjct: 254 VGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQILIASG 313
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
++ T +++ +G VYS G G+ LG
Sbjct: 314 EHHTLILARNGRVYSIGRGDYGRLG 338
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 35/331 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 103
Q G H++A+T G +Y++G N LG T+ E E+ P + L ++IIQ +AG
Sbjct: 75 QVACGGVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAG 134
Query: 104 AGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T ++D G+V+ +G D+ G + G + P ++ N V++ GN
Sbjct: 135 DNHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQ--PRPIVMLGDPNDPVIKIGSGNNHV 192
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE---PNDVEP------HPLLGTL-----ENIPVVQI 207
A L+ G ++T+ G +LG E D P + + ++I I
Sbjct: 193 AALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDI 252
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN----LQPVV 263
G L A+ + V++ G G++G+G+ T + I+ LN + ++
Sbjct: 253 FVGPYNLFAVN---AAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQAL--NDVKAIHVATG 319
+A+G H ++ ++GRV + G G YG LG G + EC S P ++ L +D+KA V G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKEC-SHPTEIETLANSDIKA--VTCG 366
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+F VS GDVYS+G G + LG + D
Sbjct: 367 LAVSFAVSNSGDVYSWGMGTNLQLGSSTDDD 397
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI------RIIQ 99
S GP + AV + G V++ G N+ GQ+G+G + I SL + R I
Sbjct: 250 SDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
A+G T++++ G+VY+ G+ +G G K + P +E+L N + G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPD-VKECSHPTEIETLANSDIKAVTCGLA 368
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+ +S G VY++ G + +LG T+ + + P L+ T E+ +AG
Sbjct: 369 VSFAVSNSGDVYSWGMGTNLQLGSSTDDDILTP-TLVKTKESYNFFAASAG 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 38/253 (15%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-----------------SL 92
+G H A+T+ G+++++G GQLG E + R R S
Sbjct: 187 SGNNHVAALTANGLIFTWGCGEQGQLGR--VAERFCSRDTRQGLKRFLQPAVARVTQRSK 244
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
+ IR G ++ AG+V+A G +++G+ G +TS + + ++ +
Sbjct: 245 KDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQI-----GNGNITSLYYLAKIDSLSAL 299
Query: 153 QA---------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
A G T +L+R GRVY+ G+ RLG + + + TL N
Sbjct: 300 NDGNDERQILIASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKECSHPTEIETLANSD 359
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+ + G ++ A SG VYS G G +LG + D P L++ + N
Sbjct: 360 IKAVTCGLA--VSFAVSNSG-DVYSWGMGTNLQLGSSTDDDILTPTLVKTKESYNF--FA 414
Query: 264 VAAGAWHAAVVGQ 276
+AG H A++G+
Sbjct: 415 ASAGGQHTAILGK 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAV 273
L+LA +G+ V +G G G+LG G E+ P +++ LL ++ + VA G H
Sbjct: 29 LSLASDEAGI-VLVLGQGELGQLGLGEEILERSRPTAVKK--LLEVEFIQVACGGVHTVA 85
Query: 274 VGQDGRVCTWGWGRYGCLGHGNE---ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ + G + TWG LG E E +P +V L++VK I V+ GD T +++DG
Sbjct: 86 LTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTAALADDG 145
Query: 331 DVYSFG 336
V+ +G
Sbjct: 146 RVFCWG 151
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V G G G LG G E E S P V+ L +V+ I VA G T +++ G++Y++G
Sbjct: 37 GIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWG 96
Query: 337 CGESASLGHN 346
C + +LG +
Sbjct: 97 CNDECALGRD 106
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 30/294 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSG-QLG-HGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G + A+T G +Y++G N G LG + +W PR I L G+ I+ A G T
Sbjct: 365 GEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHT 424
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
++S +GQ++ +G SFG +G V+ P+ VESLK + V A G++ TA
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHG--NLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDI 482
Query: 163 VLSR------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
++ R G+++T+ G+ RLGH + P + L + Q++ G +L
Sbjct: 483 IVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLP-TCVAQLVELDFDQVSCGR--MLT 539
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAA 272
+A +G VY++G + G+LG+ D+ +L E+F +++G++H A
Sbjct: 540 VALTNTG-KVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEF------VKEISSGSYHVA 592
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+ G + TWG G G LG GN E + P +V+AL D++ +A G T +
Sbjct: 593 ALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ +T +G V+ +G S G+LGH + P+ + SL G+ + A G +T +
Sbjct: 313 GRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCAL 372
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGR 169
+D+G++YA+G++ +G + ++ P+ + L + ++ A G++ TA++S G+
Sbjct: 373 TDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQ 432
Query: 170 VYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 218
++T+ G+ LGH ++P +VE +L+ + V +A G + A+
Sbjct: 433 LFTYGDGSFGVLGHGNLLSVSQPKEVE------SLKGLLVKSVACGSWHTAAIVDIIVDR 486
Query: 219 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
G +++ G G G+LGH + P + Q L+ V+ G +
Sbjct: 487 FKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQ--VSCGRMLTVALTN 544
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V T G +G LG+ + + +S+ V L + +++G Y ++ G +Y++G
Sbjct: 545 TGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWG 604
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LG + D +L+
Sbjct: 605 KGTNGQLGLGNVEDRNFPTLV 625
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + + G LI+ G+V+ +G+ S G+ + V V+SP++VES
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPKMVES 353
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---ARLG-HHTEPNDVEPHPLLGTLEN 201
L + V A G + T L+ G +Y +WG + A LG + P + G L
Sbjct: 354 LDGVHVKSVACGEYQTCALTDSGELY--AWGENKYGANLGCEERSRSQWLPRRISGPLTG 411
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ ++ +A G + ++ S +++ G G G LGHG+ P+ +E + L ++
Sbjct: 412 VCILNVACGDWHTAIVS---SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKS 468
Query: 262 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
V A G+WH A + G G++ TWG G G LGH + E + +P V L +
Sbjct: 469 V--ACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE 526
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ V+ G T ++ G VY+ G LG+ D +
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSI 569
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 223 GMAVYSVGCGLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
G+ V ++GC + + G+ + + D P+L+E +L++ ++ G HAA++ + G V
Sbjct: 270 GVEVGNIGC-VDNQFGYHNTKQVDALLPKLLESTVMLDV--TNISLGRKHAALITKRGEV 326
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG G G LGH + S PK+V++L+ V VA G+Y T +++ G++Y++G
Sbjct: 327 FCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWG 382
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G ++A+T+ G VY+ GS+ GQLG+ +++ L+ + + ++G+
Sbjct: 530 DQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSY 589
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ +G +Y +GK + G + G+ + P LVE+L+++ V A G+ TA +
Sbjct: 590 HVAALTSSGSLYTWGKGTNG--QLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 18/291 (6%)
Query: 63 VVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
V+ +FG+ G+LGH E PR +R+L G+ + A G T + D+G VY +G
Sbjct: 4 VLATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGL 63
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+ G+ + + ++ V P V + + + A G + T + G V++F +L
Sbjct: 64 NDKGQLGHDSEDSE-VGLPGEVAMPERVVALSA--GYYHTLCVGESGSVWSFGCNGKGQL 120
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G + V L+ +L++ VV +AAG + LAL +G VYS G G+LGHGS
Sbjct: 121 GLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT---AGGEVYSWGNAANGRLGHGS 177
Query: 242 RTDEK--------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
T + PRL+ F+ L ++ V+AG H+A V G WG+G++ LG
Sbjct: 178 ATPRRLFGSSIEFLPRLVRAFEALRVEQ--VSAGQMHSAAVSTAGDAFLWGYGKFHQLGF 235
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G++E + P V+ L A VA G + + G V ++G ++ LG
Sbjct: 236 GSDEDLAGPTVLPPLKGSTAA-VACGSLHSLALQYGGHVLAWGTNQNGVLG 285
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 21/304 (6%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+A+A G H+ AV G VY++G N GQLGH + + E P R++ +AG
Sbjct: 40 KAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE-VGLPGEVAMPERVVALSAGYY 98
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + ++G V++FG + G+ G + LV P+LV+SL++ VV A G + L+
Sbjct: 99 HTLCVGESGSVWSFGCNGKGQLGLG-KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT 157
Query: 166 REGRVYTFSWGNDA--RLGHHTEP------NDVEPHP-LLGTLENIPVVQIAAGYCYLLA 216
G VY SWGN A RLGH + + +E P L+ E + V Q++AG + A
Sbjct: 158 AGGEVY--SWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAA 215
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
++ + G G +LG GS D P ++ L VA G+ H+ +
Sbjct: 216 VSTAGD---AFLWGYGKFHQLGFGSDEDLAGPTVLPP---LKGSTAAVACGSLHSLALQY 269
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG + G LG G+E+ + PK + V A +A G + V+ G +Y++G
Sbjct: 270 GGHVLAWGTNQNGVLGQGHEK-QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWG 328
Query: 337 CGES 340
G S
Sbjct: 329 WGGS 332
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 36/323 (11%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQ 93
L GE AG H++ V G V+SFG N GQLG G R PR ++SLQ
Sbjct: 80 LPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQ 139
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------VQGTKLVTSPQLVESLK 147
+++ AAG ++ ++ G+VY++G + G +G + G+ + P+LV + +
Sbjct: 140 DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFE 199
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 204
+ V Q + G +A +S G + + +G +LG ++ + P PL G+
Sbjct: 200 ALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGS-----T 254
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+A G + LAL G V + G G LG G EK + ++ + +
Sbjct: 255 AAVACGSLHSLALQY---GGHVLAWGTNQNGVLGQG---HEKQQQPKRPSKVPGVSAEQI 308
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRY--------------GCLGHGNEECESVPKVVQALND 310
AAG H+A V G++ TWGWG G LGHGN+ P V L+
Sbjct: 309 AAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSL 368
Query: 311 VKAIHVATG-DYTTFVVSEDGDV 332
+ VA G ++T +V D V
Sbjct: 369 TETDLVACGMNHTAAIVELDSGV 391
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 20/241 (8%)
Query: 123 SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+FG + G G L + P++V +L + + A G TA + G VYT+ +
Sbjct: 7 TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDK 66
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
+LGH +E ++V + E VV ++AGY + L C +V+S GC G+LG
Sbjct: 67 GQLGHDSEDSEVGLPGEVAMPER--VVALSAGYYHTL---CVGESGSVWSFGCNGKGQLG 121
Query: 239 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-- 295
G + PRL++ Q + + V VAAG H+ + G V +WG G LGHG+
Sbjct: 122 LGKDVVLVREPRLVKSLQ--DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT 179
Query: 296 ------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
E +P++V+A ++ V+ G + VS GD + +G G+ LG +
Sbjct: 180 PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDE 239
Query: 350 D 350
D
Sbjct: 240 D 240
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 280 VCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ T+G G G LGH E E +P+VV+AL V VA G T V + G VY++G
Sbjct: 5 LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64
Query: 339 ESASLGHNA 347
+ LGH++
Sbjct: 65 DKGQLGHDS 73
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 23/285 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR + S + + A G +++ G+V+++G +S G Q V+ P+LVE+
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNES--SRTLGHQINDSVSCPKLVEA 310
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENI 202
L ++ V A G+ T ++ G + +S G RLG + E N PH L G +++I
Sbjct: 311 LASVHVKAVAFGSKHTCAVTVSGELLEWSEGAH-RLGLLSNWYERNQWSPHKLFGPMDSI 369
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V +IA G + + S +++ G G G LGHG + P+ +E + L ++ V
Sbjct: 370 SVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426
Query: 263 VVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
A G WH A V G++ TWG G LGH +++ + VP V L
Sbjct: 427 --ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ-VCSL 356
+ V+ G T V++ G V++ G + LG N ADG+ +C++
Sbjct: 485 FLQVSCGAALTVVLTSTGVVFTIGSSKHGQLG-NPHADGESICTV 528
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G H+ +TS G ++++G + G LGHG + RP+ + SL+G+R+ A G
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPW 431
Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
T + + +G+++ +G G+ + + KLV P V+ L + +Q +
Sbjct: 432 HTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV--PTCVDLLTSYDFLQVS 489
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G T VL+ G V+T +LG+ H + + + GTL+N V +I++G ++
Sbjct: 490 CGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESI--CTVEGTLKNEFVREISSGSSHV 547
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAW 269
L + V++ G G G+LG G + P L+E Q ++Q + AA
Sbjct: 548 AVLTLKGQ---VFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACGSNFSAAVCL 604
Query: 270 HAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
H + +D +C+ +G+ R + C G+ C S
Sbjct: 605 HKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMFCNS 642
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 24/288 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVV--YSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAA 102
+A+A G H+ AVT G + +S G++ G L + +W P + + I + + A
Sbjct: 317 KAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIAC 376
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G T +I+ +GQ++ +G +FG +G QG + P+ VESLK + V A G + T
Sbjct: 377 GEWHTAIITSSGQLFTYGDGTFGVLGHGDKQG---IARPKEVESLKGLRVKSVACGPWHT 433
Query: 162 AVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A + + G+++T+ + +LGH + + P + L + +Q++ G
Sbjct: 434 AAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVP-TCVDLLTSYDFLQVSCGA 492
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ L S V+++G G+LG+ E + + L N +++G+ H
Sbjct: 493 ALTVVLT---STGVVFTIGSSKHGQLGNPHADGESICTV--EGTLKNEFVREISSGSSHV 547
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
AV+ G+V TWG G G LG G+ + S P +V+AL +A G
Sbjct: 548 AVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACG 595
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 18/310 (5%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q+IA G H+ VT G V+S+G+ SS LGH + P+ + +L + + A G+
Sbjct: 265 QSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSK 324
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGT---KLVTSP-QLVESLKNIFVVQAAIGNFFT 161
T ++ +G++ + S G G+ + SP +L + +I V + A G + T
Sbjct: 325 HTCAVTVSGELLEW---SEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHT 381
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--- 218
A+++ G+++T+ G LGH + P + +L+ + V +A G + A+
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKE-VESLKGLRVKSVACGPWHTAAVVEVT 440
Query: 219 ----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
C +++ G GKLGH + + P ++ + + V+ GA V+
Sbjct: 441 SSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDF--LQVSCGAALTVVL 498
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V T G ++G LG+ + + ES+ V L + +++G V++ G V++
Sbjct: 499 TSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFT 558
Query: 335 FGCGESASLG 344
+G G LG
Sbjct: 559 WGKGADGQLG 568
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 62 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 121
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 180
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 181 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 237
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 238 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 295
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 296 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 349
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 154 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 213
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 214 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 271
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 272 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 318
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
LQ IR AG +L + +++ G + G G+ + P+ ++SL
Sbjct: 45 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC--LGLGDVQSTIEPRRLDSLNGKK 102
Query: 151 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V+++
Sbjct: 103 IACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 160
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + L L S V++ G G++G GS ++ PR + L N V +A G
Sbjct: 161 ACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIACG 216
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V G V WG+ G LG GN + P V AL ++ VA G T V++
Sbjct: 217 QMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 276
Query: 328 EDGDVYSFGCGESASLG 344
++G VY++G LG
Sbjct: 277 DEGQVYAWGANSYGQLG 293
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 108
G HS A+T+ G V ++G G+LGHG +E++ RP+ + +L G R I A G+G +T+
Sbjct: 27 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 86
Query: 109 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
I+D V+++G +G+ G G KL P +ESL + VV+ G+ F+ L++
Sbjct: 87 CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 143
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G VYT+ G+ RLGH + + P + L+ ++ IA G + +AC SG VY
Sbjct: 144 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATGSLH--CVACSDSG-EVY 199
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ G G+LG G+ T + PRL+ Q
Sbjct: 200 TWGDNDEGQLGDGTVTAIQWPRLVTALQ 227
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+LVE L + V A G+ +A ++ G V T+ G RLGH + + P L+ L
Sbjct: 10 PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEAL 68
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+ IA G L C V+S G G GKLG G K P IE L L
Sbjct: 69 LGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGL 125
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
V V G+ + + + G V TWG G + LGHG+ + PK V AL K I +ATG
Sbjct: 126 GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATG 185
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQ 366
S+ G+VY++G + LG DG V ++ + + LQ
Sbjct: 186 SLHCVACSDSGEVYTWGDNDEGQLG-----DGTVTAIQWPRLVTALQ 227
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 77 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
HG RP+ + L G+ + A G+ + I+ +G V +GK +G +G +L
Sbjct: 1 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 60
Query: 137 VTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
P+LVE+L + A G + T ++ + V+++ G+ +LG P+
Sbjct: 61 --RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 118
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ +L + VV++ G + +AL SG AVY+ G G +LGHGS + P+ +
Sbjct: 119 I-ESLAGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 174
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
Q + + +A G+ H G V TWG G LG G P++V AL +
Sbjct: 175 Q--GKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIV 232
Query: 315 HVATGDYTTFVVS 327
V G T +S
Sbjct: 233 KVTCGSAHTLALS 245
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G S+A+T G VY++G +LGHG+ + RP+ + +LQG +II A G+ +
Sbjct: 133 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 192
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
SD+G+VY +G + E + G + P+LV +L+ +V+ G+ T LS
Sbjct: 193 SDSGEVYTWGDND--EGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALS 245
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 80 SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 139
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ +G VY +GK F +G V P+ V +L+ ++ A G+ S G
Sbjct: 140 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 197
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VYT+ ++ +LG T P L+ L+ +V++ G + LAL+
Sbjct: 198 VYTWGDNDEGQLGDGTVTAIQWPR-LVTALQGKHIVKVTCGSAHTLALS 245
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 269 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293
Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
+ H +A Q G V WG R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLK 147
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 16 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLN 72
Query: 148 NIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V
Sbjct: 73 GKKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 130
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++A G + L L S V++ G G++G GS ++ PR + L N V +
Sbjct: 131 IEVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTI 186
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G V G V WG+ G LG GN + P V AL ++ VA G T
Sbjct: 187 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 246
Query: 325 VVSEDGDVYSFGCGESASLG 344
V++++G VY++G LG
Sbjct: 247 VLTDEGQVYAWGANSYGQLG 266
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 26/321 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAG 103
Q G H+I V+ G VYS+G N G LG GT EE+ PR + QGIR++ A+AG
Sbjct: 76 QVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAG 135
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-----SLKNIFVVQAAIGN 158
+ ++D G+V+A+G + G+ + ++++ + V+ GN
Sbjct: 136 DSHSAALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGN 195
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQI 207
T +L+ EG +YT G +LG E + P + +
Sbjct: 196 DHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIF 255
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVV 264
A +C A VY+ G G+LG G+ + +P +I+ + + +
Sbjct: 256 AGSFC---TFALSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQI 312
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTT 323
G H+ V +G+ + G YG LG G + E S+PK + +L + +A G+ +
Sbjct: 313 HGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVS 372
Query: 324 FVVSEDGDVYSFGCGESASLG 344
F V++ G +YS+G G S LG
Sbjct: 373 FAVTDKGHLYSWGLGTSLQLG 393
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 40/317 (12%)
Query: 58 VTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
V G + + G GQLG G E RP I+ ++G+ IQ G T+ +S+ G+V
Sbjct: 34 VQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEV 93
Query: 117 YAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
Y++G + G G G + + P+ V + I VV A+ G+ +A L+ +GRV F
Sbjct: 94 YSWGCNDDGALGRPTEGTDGEEFI--PRKVLLPQGIRVVYASAGDSHSAALTDDGRV--F 149
Query: 174 SWG-----------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+WG A +G E + P G + P V++ +G + + L +
Sbjct: 150 AWGAYRDASGQIGLTAASIGKKNEVIKIYPK---GDQIDDPAVKVVSGNDHTVILTSE-- 204
Query: 223 GMAVYSVGCGLGGKLGH-----GSRTDEKHPRLIEQFQLLNLQP----VVVAAGAWHAAV 273
G+ +Y+ G G G+LG G R + +I Q++ + + AG++
Sbjct: 205 GL-IYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFA 263
Query: 274 VGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA-----IHVATGDYTTFVVS 327
+ +D V WG YG LG G E P+V+Q+L++++ + + G + + V
Sbjct: 264 LSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVAD 323
Query: 328 EDGDVYSFGCGESASLG 344
+G YS G E LG
Sbjct: 324 GNGKTYSIGRSEYGRLG 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-----------EEEWRPRPIRSLQGI 95
+ ++G H++ +TS+G++Y+ G+ GQLG E P+ +R +
Sbjct: 190 KVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQ 249
Query: 96 RIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF---- 150
AG+ T +S D VYA+G +++G+ G T+ +P++++SL I
Sbjct: 250 FFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGT--TENFFNPEVIQSLSEIREHAN 307
Query: 151 -VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+Q G + V G+ Y+ RLG + + + +LE VV+IA
Sbjct: 308 GYLQIHGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIAC 367
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAG 267
G A+ + +YS G G +LG G D P L++ L Q V V+AG
Sbjct: 368 GEAVSFAVTDKGH---LYSWGLGTSLQLGVGDDEDIFDPSLVQSNNLTLAQDEVLAVSAG 424
Query: 268 AWHAAVV 274
H A++
Sbjct: 425 GQHTAIL 431
>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1086
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 28/285 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + + G LI+ G+V+ +G S G+ + V V P++VES
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMD--VGMPKVVES 358
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLEN 201
L ++ + G + T L+ G +YT WG++ + T+ P+ L G L+
Sbjct: 359 LDDVHIKSVVCGEYQTCALTHSGELYT--WGDNKNGANLTDEMRTRSQWLPYKLFGPLDG 416
Query: 202 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
I + ++A G + +++L+ Q +++ G G G LGHGS HP+ + + L++
Sbjct: 417 ITISKVACGEWHTAIVSLSGQ-----LFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSV 471
Query: 260 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ V A G+WH A + G++ TWG G G LGH + E + VP V L
Sbjct: 472 KSV--ACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL 529
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
D I V+ G T ++ G VY+ G LG+ D +
Sbjct: 530 VDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSI 574
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 30/296 (10%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQ--LGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAG 105
+ G + A+T G +Y++G N +G T +W P + L GI I + A G
Sbjct: 368 VCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEW 427
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL- 164
T ++S +GQ++ +G +FG +G + V+ P+ V SL+ + V A G++ TA +
Sbjct: 428 HTAIVSLSGQLFTYGDGTFGVLGHG--SLQSVSHPKEVASLRGLSVKSVACGSWHTAAIV 485
Query: 165 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G+++T+ G+ RLGH + P + L + ++++ G +
Sbjct: 486 DIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVP-TCVAKLVDYDFIRVSCGR--M 542
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWH 270
L +A +G VY++G + G+LG+ D+ +L E+F +++G++H
Sbjct: 543 LTVALTNTG-KVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEF------VKEISSGSYH 595
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
AV+ G V TWG G G LG GN E + P V+AL D + +A G T +
Sbjct: 596 VAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAI 651
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 232 GLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G+ +LG+ S + D P+L+E +L+++ + + G HAA++ + G V WG G G
Sbjct: 283 GMVQRLGNQSVMQVDALVPKLLESTAMLDVRSI--SLGRKHAALITKRGEVFCWGDGSRG 340
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LGH +PKVV++L+DV V G+Y T ++ G++Y++G
Sbjct: 341 KLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWG 387
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G H+ V+ G ++++G + G LGHG+ + P+ + SL+G+ + A G+
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479
Query: 106 RTMLISD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
T I D G+++ +G G + KLV P V L + ++
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV--PTCVAKLVDYDFIRV 537
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G T L+ G+VYT +LG + + D + G L+ V +I++G ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLG-NPQAKDKSITIVEGKLKEEFVKEISSGSYHV 596
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAW 269
L SG VY+ G G G+LG G+ D P +E + ++ + + AA
Sbjct: 597 AVLT---SGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICL 653
Query: 270 HAAVVGQDGRVCT 282
H ++ D C+
Sbjct: 654 HKSISVTDQSSCS 666
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 23/291 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T G VY++G++ + L G T +W P+ + SL GI I A G T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
++S G+++ +G +FG +G + +SP+ VESL + V AA G++ TA +
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEV 481
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
S G+++T+ G++ RLGH + + P + L + VQ++ G +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLVDYDFVQVSCGRMLTVA 540
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+++G G+LG+ D+ ++ + QL V++ G++H AV+
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKA---VMVEGQLKQEFVKVISTGSYHVAVLTS 594
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G V TWG G G LG G+ E P V+AL D + + G T +S
Sbjct: 595 GGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 24/283 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + A G L + G+V+ +G +G G + ++SP++V+S
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGR--LGQKIDMDISSPKIVDS 352
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 201
L + V A G + T L+ G VYT WGND L + P L G+L+
Sbjct: 353 LNGLHVKNVACGEYHTCALTDSGEVYT--WGNDVCCADLLIEGRTRSQWIPQKLGGSLDG 410
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I + +A G + ++ S +++ G G G LGHG P+ +E L ++
Sbjct: 411 ISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRS 467
Query: 262 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
A G+WH A + + G++ TWG G G LGH + + VP V L D
Sbjct: 468 A--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVD 525
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+ V+ G T ++ G V++ G + LG+ D V
Sbjct: 526 YDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAV 568
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 25/254 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G H+ V+S G ++++G + G LGHG P+ + SL G+R+ AA G+
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSW 473
Query: 106 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
T I S +G+++ +G G + G+KLV P V L + VQ
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV--PTRVTQLVDYDFVQV 531
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
+ G T L+ G+V+ +LG+ H V + G L+ V I+ G +
Sbjct: 532 SCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVM---VEGQLKQEFVKVISTGSYH 588
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 268
+ L SG +VY+ G G G+LG G D P +E Q + P AA +
Sbjct: 589 VAVLT---SGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645
Query: 269 WHAAVVGQDGRVCT 282
H + D CT
Sbjct: 646 LHKPISISDQSTCT 659
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 18/310 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 329 DGDVYSFGCG 338
G VY++GCG
Sbjct: 632 TGQVYAWGCG 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 17/309 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4076
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4077 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4134
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-------LGTLENIPVV-QIAAGYCYLL 215
++ +G+++TF G+ RLG N P + +G N ++ +A G + L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A++ G V++ G G GKLG G+ T + P+ ++ + ++ V A G + +
Sbjct: 4195 AVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALT 4250
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG+V T+G R L G + P+ V L V VA G T ++ GD+Y++
Sbjct: 4251 KDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAW 4310
Query: 336 GCGESASLG 344
G LG
Sbjct: 4311 GSNSEGQLG 4319
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 27/314 (8%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 157
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 130/249 (52%), Gaps = 23/249 (9%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 165 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 217
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 336
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 337 CGESASLGH 345
G++ LGH
Sbjct: 588 GGDNGKLGH 596
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 32/252 (12%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4115 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4174
Query: 98 IQA---------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
QA A G T+ +S D V+AFG +G+ G K +SPQ V+ L
Sbjct: 4175 GQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLC 4232
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLE 200
I + + A G F+ L+++G+VYTF G D +G +H P V P+L
Sbjct: 4233 GIGIKKVACGTQFSVALTKDGQVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA--- 4284
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+ + +A G + LAL S +Y+ G G+LG G + P L+ Q N++
Sbjct: 4285 GVVIEDVAVGAEHTLALT---STGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4341
Query: 261 PVVVAAGAWHAA 272
++AG H+A
Sbjct: 4342 Q--ISAGRCHSA 4351
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 110 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+ VY +WGN++ G+ T P +P + G L+ I + Q++AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQVSAGTSHSLAWTALPR 738
Query: 223 GMAV 226
V
Sbjct: 739 DRQV 742
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 4027 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4086
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 4087 GEVFSWGDGDYGKLGH 4102
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 16/289 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + +L G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V + A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 186 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P I Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRIAALQGIRIQ--RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 301 APVVVEKDRIVEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAA 101
++ ++ G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++ A
Sbjct: 152 KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIA 211
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G +M + + G+VY +G + G+ G G + +P + +L+ I + + A G T
Sbjct: 212 CGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRIQRVACGYAHT 269
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
VL+ EG+VY + + +LG + N P P++ +E +V+IAA
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIVEIAA 315
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV + G VY +G N +GQLG G++ + P I +LQGIRI + A G T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE K+ V AA + T+ +G + +
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVVVE--KDRIVEIAACHSAHTSAAKTQGG-HVYM 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 159/348 (45%), Gaps = 26/348 (7%)
Query: 9 KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI-------AGPGHSIAVTSK 61
KP+ +A LK+ G W + + C E Q I + + T
Sbjct: 14 KPV-QATLSSLKKLDVGKWPIF--------SLCSEEELQLIRQACVFGSAGNEVLYTTVN 64
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 120
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWG 124
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N +
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
+G + N P + G L+N VV IA G + +A +G VY G G+LG G
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLG 240
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 241 NSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298
Query: 301 VPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 299 YPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 145/309 (46%), Gaps = 20/309 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + G + S G N GQLG + I SL+ I+ + G ++ +
Sbjct: 42 GEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSIEQ--ISSLEAQTIVDISCGTNHSVAV 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
SD G +Y++G S G+ G ++ T P+ + L N ++Q + GNF + LS +GRV
Sbjct: 100 SDEGSIYSWGDGSEGQLGTGNLSSRNFT-PKKITGLFNTKIIQISCGNFHSLALSEDGRV 158
Query: 171 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
FSWG + +LG ++ + L+ +L+ IP+VQ+ AG AL+ SG V++
Sbjct: 159 --FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSM--SG-TVFA 213
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG S + + L NL ++ G H AV+ +DG V T+G +
Sbjct: 214 WGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTH 273
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG + SVP+ ++ + VA G Y T +Y F C S G ++
Sbjct: 274 GQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTL-------LYVFSCNRIVSFGKGSL 325
Query: 349 --ADGQVCS 355
D CS
Sbjct: 326 RPQDNTECS 334
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V+S+G N GQLG G+ + P+ ++SL+GI ++Q AG
Sbjct: 141 QISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGS 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ +S +G V+A+GK++ G+ + K P V SL+N+ V + G TAVLS
Sbjct: 201 QSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLS 260
Query: 166 REGRVYTFSWGNDARLGHHT 185
++G VYTF +LG ++
Sbjct: 261 KDGSVYTFGDDTHGQLGQNS 280
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P+ T+E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEIAA 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLK 147
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 40 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLN 96
Query: 148 NIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V
Sbjct: 97 GKKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++A G + L L S V++ G G++G GS ++ PR + L N V +
Sbjct: 155 IEVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTI 210
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G V G V WG+ G LG GN + P V AL ++ VA G T
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 325 VVSEDGDVYSFGCGESASLG 344
V++++G VY++G LG
Sbjct: 271 VLTDEGQVYAWGANSYGQLG 290
>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
Length = 464
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 49 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 96 VSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNH 155
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ +++ G VYAFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 156 TLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPI--TKMACGAEFSMIMDC 213
Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 214 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 273
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 274 VRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 330
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 331 IYAGYTCSFAVSETGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 383
Query: 324 FVVSEDGDVYSFG 336
+V+ D S+G
Sbjct: 384 IIVAADESTISWG 396
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G VY+FG N GQLG G + + P P + + G I + A GA
Sbjct: 149 AACGRNHTLALTETGSVYAFGENKMGQLGLG-NQTDAVPSPTQIMYNGQPITKMACGAEF 207
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 208 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 266
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 267 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 324
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY A++ + G+ + + SR +P+ ++ ++
Sbjct: 325 GRGAAQIYAGYTCSFAVS-ETGGLFFWGA--------TNTSRESTMYPKAVQDLCGWKIR 375
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 376 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 432
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 433 MGYAHSLVIARD 444
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 81 PH-RYGCLSGVQVRSVVSGPCAAHSLLITAEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 138
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E +L + +V+AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 139 E---VLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQ-TDAVPSPTQIMYN 194
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 195 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 118/288 (40%), Gaps = 54/288 (18%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
GR + G++ +G YG VQ +V+ P SL
Sbjct: 60 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL-------------- 105
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL
Sbjct: 106 --LITAEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET 162
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
S VY+ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 163 GS---VYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 215
Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 216 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 275
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 276 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 323
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 326 RGAAQIYAGYTCSFAVSETGGLFFWGATNTSR------ESTMYPKAVQDLCGWKIRSLAC 379
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 380 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSL 439
Query: 163 VLSRE 167
V++R+
Sbjct: 440 VIARD 444
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 147/302 (48%), Gaps = 20/302 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ S G V+++G N GQLG GTT + P +++L G+ I AAG G ++
Sbjct: 74 AGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLA 131
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G + T+P V++L + V A G+ L +G
Sbjct: 132 LKSDGTVWAWGYNGYGQLGDGTITNR--TTPVQVKNLTGVVAVAAGGGHSL--ALKSDGT 187
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
V+ + + +LG T N P ++N+ VV IAAG + LAL S V++
Sbjct: 188 VWAWGYNGYGQLGDGTTMNRYTPV----QVQNLTGVVAIAAGSSHSLALK---SDGTVWA 240
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ T+ P ++ + V +AAG H+ + DG V TWGW
Sbjct: 241 WGNNGYGQLGDGTTTNRTTPVRVQGLTDV----VAIAAGNEHSLALKSDGTVWTWGWNYS 296
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G P VQ L V AI A G + + DG V+++G + LG
Sbjct: 297 GQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLALKSDGTVWAWGNNDWGELGDGTR 354
Query: 349 AD 350
D
Sbjct: 355 TD 356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+A+ S G V+++G N GQLG GT P +++L ++ AAG G ++
Sbjct: 124 AGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNL--TGVVAVAAGGGHSLA 181
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G + +P V++L + + A G+ + L +G
Sbjct: 182 LKSDGTVWAWGYNGYGQLGDGTTMNRY--TPVQVQNLTGVVAIAA--GSSHSLALKSDGT 237
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WGN+ +LG T N P + G + VV IAAG + LAL S V+
Sbjct: 238 VW--AWGNNGYGQLGDGTTTNRTTPVRVQGLTD---VVAIAAGNEHSLALK---SDGTVW 289
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G+ T+ P Q+ NL VV +AAG H+ + DG V WG
Sbjct: 290 TWGWNYSGQLGDGTTTNRYTP-----VQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNN 344
Query: 287 RYGCLGHGNEECESVPKVVQALN 309
+G LG G P V LN
Sbjct: 345 DWGELGDGTRTDRHTPVQVSGLN 367
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 14/204 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ S G V+++G N GQLG GTT + P +++L G+ I AAG+ ++ +
Sbjct: 178 HSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNLTGVVAI--AAGSSHSLALKSD 235
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + +G+ G + T+P V+ L ++ + A GN + L +G V+T+
Sbjct: 236 GTVWAWGNNGYGQLGDGTTTNR--TTPVRVQGLTDVVAIAA--GNEHSLALKSDGTVWTW 291
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCG 232
W +LG T N P ++N+ VV IAAG + LAL S V++ G
Sbjct: 292 GWNYSGQLGDGTTTNRYTPV----QVQNLTGVVAIAAGGGHSLALK---SDGTVWAWGNN 344
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQL 256
G+LG G+RTD P + L
Sbjct: 345 DWGELGDGTRTDRHTPVQVSGLNL 368
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 35/311 (11%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 95
AG + AG S+A+ S G V+++G P P+++L G+
Sbjct: 25 AGADISTGSQVKIAAGGARSLAIKSDGTVWAWGGT---------------PVPVQNLTGV 69
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
++A G+ ++ + G V+A+G + +G+ G + +P V++L + + A
Sbjct: 70 VAVEA--GSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRY--TPVQVQNLTGVVAIAAG 125
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+ L +G V+ + + +LG T N P ++N+ +A
Sbjct: 126 GGHSL--ALKSDGTVWAWGYNGYGQLGDGTITNRTTPV----QVKNL-TGVVAVAAGGGH 178
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 274
+LA + G V++ G G+LG G+ + P Q+ NL VV +AAG+ H+ +
Sbjct: 179 SLALKSDGT-VWAWGYNGYGQLGDGTTMNRYTP-----VQVQNLTGVVAIAAGSSHSLAL 232
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG V WG YG LG G + P VQ L DV AI A G+ + + DG V++
Sbjct: 233 KSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAI--AAGNEHSLALKSDGTVWT 290
Query: 335 FGCGESASLGH 345
+G S LG
Sbjct: 291 WGWNYSGQLGD 301
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
V V AG++++ + DG V WG YG LG G P VQ L V AI A G
Sbjct: 70 VAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGG 127
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ + DG V+++G LG I +
Sbjct: 128 HSLALKSDGTVWAWGYNGYGQLGDGTITN 156
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 156/317 (49%), Gaps = 11/317 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G ++IAVT +G VYS G+N GQLG + R + I + + +AA G
Sbjct: 35 EIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRK--RLQLISGIDPLAFRKAACG 92
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ T+++++ GQ++++G + E + G+ + + + P++V++L +VQ A G +
Sbjct: 93 SSHTLVVNEWGQLFSWGSNV--EGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSI 150
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L+ G +Y + +D +LG ++ L+ +L +P+ +A G + + ++ S
Sbjct: 151 ALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVIS--KS 208
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G AV++ G G+LG + P + L N + A G + + DG V T
Sbjct: 209 G-AVFAWGRNTFGQLGLSDIQNRNVPCQLRT--LRNSRVCYAACGEEFSVFLTMDGGVFT 265
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 341
G G YG LGHGN+ E +P+ + L ++ G +T +V G VY++G G +
Sbjct: 266 CGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAG 325
Query: 342 SLGHNAIADGQVCSLLF 358
LG+ + ++F
Sbjct: 326 QLGNRIAQNSTTPQVVF 342
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 16/287 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
++ +GS G+LG G E+E + PR + + I Q A G T+ ++ GQVY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ G+ +L QL+ + + +AA G+ T V++ G++ FSWG++
Sbjct: 61 NDHGQLGQEKGRKRL----QLISGIDPLAFRKAACGSSHTLVVNEWGQL--FSWGSNVEG 114
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LG + ++ TL +VQIA G + +AL + +Y+ G G+LG
Sbjct: 115 QLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT---NNGELYAWGSNSDGQLGL 171
Query: 240 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
GS T E P+L+ + + VA G +H V+ + G V WG +G LG + +
Sbjct: 172 GSDTKMELKPKLVHSLAAVPI--AFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQN 229
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+VP ++ L + + + A G+ + ++ DG V++ G G LGH
Sbjct: 230 RNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH 276
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+I ++ G V+++G N+ GQLG + P +R+L+ R+ AA G ++ ++
Sbjct: 201 HTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMD 260
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G + ++++ P+ + L V Q + G T A++ GRVY
Sbjct: 261 GGVFTCGAGMYGQLGHGNKTSEIL--PRQIMELMGSTVTQISCGRRHTLALVPSRGRVYA 318
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG+ N P + G
Sbjct: 319 WGLGGAGQLGNRIAQNSTTPQVVFG 343
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L + G+V+A+G++ G +G ++ P+LVE+
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 303
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G F T ++ G +YT+ G N LG+ + P + G LE +
Sbjct: 304 LAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQ 363
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V+ ++ G + A S V++ G G G LGHG R +P+ +E L + +
Sbjct: 364 VLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEA--LSGFRTMK 418
Query: 264 VAAGAWHAAVVGQDG----------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
VA G WH+A + + ++ TWG G LGHG+++ VP VQ+L D
Sbjct: 419 VACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSF 478
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VA G T +S G V++ G + LG N +DG+
Sbjct: 479 HQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDGK 516
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 156/298 (52%), Gaps = 27/298 (9%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ AVT+ G +Y++G + G LG+G W P+ + L+G++++
Sbjct: 308 NVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSV 367
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G+ + L + +G+V+ FG +FG +G + T V P+ VE+L ++ A G +
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKRET--VGYPKEVEALSGFRTMKVACGLWH 425
Query: 161 TA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 208
+A V+SR ++YT+ G+ +LGH + + + P + +L + Q+A
Sbjct: 426 SAAIVESSNHVSINVISR--KLYTWGAGDKNQLGHGDKDSRLVP-TCVQSLIDYSFHQVA 482
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
G+ +AL+ SG V+++G G+LG+ ++D K P + Q +L ++ G+
Sbjct: 483 CGHSMTIALST--SGH-VFTMGSSSNGQLGN-PKSDGKQPIPV-QDRLSGELVEEISCGS 537
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
H AV+ V TWG G G LGHG E + P +V+AL D +A G ++TT +
Sbjct: 538 CHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 595
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G V++FG + G LGHG E P+ + +L G R ++ A G + I
Sbjct: 370 GSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAI 429
Query: 111 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
++ ++Y +G + +G + ++LV P V+SL + Q A G+
Sbjct: 430 VESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLV--PTCVQSLIDYSFHQVACGHSM 487
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T LS G V+T ++ +LG + + + +P P+ L V +I+ G C++ L
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLG-NPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLT-- 544
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S VY+ G G G+LGHG D+K P L+E + +++ + + H V G
Sbjct: 545 -SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSG 603
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
D VC+ + R+ C G C S KV++A
Sbjct: 604 ADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKA 644
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 33/277 (11%)
Query: 110 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
I G VY +G+ + G Y ++ P+ +ES + V Q A G A+
Sbjct: 211 IESLGDVYVWGEVWTDVIPAEGSTNYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 269
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+R+G V F+WG + RLGH T+ + P L+ L V IA G + A+
Sbjct: 270 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYIACGEFHTCAVTASG 326
Query: 222 S----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
G Y+VG LG+G+ P+ + L +Q + V+ G+WH+A+
Sbjct: 327 DLYTWGDGYYNVGL-----LGNGAGASHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSS 380
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD------ 331
G+V T+G G +G LGHG E PK V+AL+ + + VA G + + + E +
Sbjct: 381 GKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINV 440
Query: 332 ----VYSFGCGESASLGHNAIADGQVCSLLFLSIFQY 364
+Y++G G+ LGH D ++ S+ Y
Sbjct: 441 ISRKLYTWGAGDKNQLGHGD-KDSRLVPTCVQSLIDY 476
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 27/327 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT + RP+ + +L + A G
Sbjct: 259 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFH 318
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQAAIGNFFTA 162
T ++ +G +Y +G G G+ G S P+ V L+ + V+ + G++ +A
Sbjct: 319 TCAVTASGDLYTWGD---GYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSA 375
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ + G+V+TF G LGH P +VE L +++A G + A+
Sbjct: 376 LTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVE------ALSGFRTMKVACGLWHSAAI 429
Query: 218 ACQPSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ +++ Y+ G G +LGHG + P ++ L++ VA G
Sbjct: 430 VESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQ--SLIDYSFHQVACGHSM 487
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ G V T G G LG+ + + V L+ ++ G V++
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRS 547
Query: 331 DVYSFGCGESASLGHNAIADGQVCSLL 357
+VY++G G + LGH + D + +L+
Sbjct: 548 EVYTWGMGANGRLGHGGVEDKKKPTLV 574
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G N +GQLG GTTE+ P+ I++ +GI I AAGA T +++ G+++ +G +G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
G + +LV PQ V S+ +V A G T +S G +YT+ W +LGH
Sbjct: 61 LGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ + PH L L + QI+ G+ + +AL +Y G G++G G D
Sbjct: 119 EDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---LYGWGWNKFGQVGAGDNIDHC 174
Query: 247 HPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
P Q + Q V+ + W H V V +WG G G LGHG + P ++
Sbjct: 175 SPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 231
Query: 306 QALN 309
+AL+
Sbjct: 232 EALS 235
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 115/240 (47%), Gaps = 10/240 (4%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G++ G+ G LV PQ +++ + I + A G TA ++ +G ++ + WG
Sbjct: 1 WGRNQNGQLGLGTTEDSLV--PQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
LG + + P + +++ +V +A G+ + ++++ S +Y+ G G+LG
Sbjct: 59 GNLGLGDRNDRLVPQKV-SSVDGDKMVMVACGWRHTISVS---SLGGLYTYGWSKYGQLG 114
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
HG D P +E + N+ + +G W H + DG++ WGW ++G +G G+
Sbjct: 115 HGDFEDRLVPHRLEALRGDNISQI---SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
P ++ D K I ++ G T V++ +V+S+G G + LGH D +L
Sbjct: 172 DHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 231
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+I+V+S G +Y++G + GQLGHG E+ P + +L+G I Q + G TM ++
Sbjct: 92 HTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 151
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G++Y +G + FG+ G SP ++ ++ V+Q + G T ++ + V+++
Sbjct: 152 GKLYGWGWNKFGQV--GAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSW 209
Query: 174 SWGNDARLGH 183
G + +LGH
Sbjct: 210 GRGTNGQLGH 219
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
SQ G H++A+T+ G +Y +G N GQ+G G + P I+ Q ++IQ + G
Sbjct: 136 SQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWR 195
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
T+ ++D V+++G+ + G+ +G + +P ++E+L
Sbjct: 196 HTLAVTDKQNVFSWGRGTNGQLGHGESVDR--NTPMILEAL 234
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESAS 342
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S +
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPSDT 319
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
I+++ GD T V+ +DG V++FG S LG++ + +
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVISFGHGPSDTSKPTHPE 326
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%)
Query: 25 GSWKLVLRFLLAGEACCRRENSQAIAGPGHS--IAVTSKGVVYSFGSNSSGQLGHGTTEE 82
G W + F L EA + + G + + T ++ G+N G LG G +
Sbjct: 5 GKWPI---FSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQS 61
Query: 83 EWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
PR + SL G +I + G+G +L + G+V+ +G +++ + G LV
Sbjct: 62 TIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPY-H 120
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
+ +L N V++ A G++ + VL+ +G V+ + + N ++G + N P + G L++
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQS 180
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
VV IA G + ++A +G V+ G G+LG GS ++ P + Q + +Q
Sbjct: 181 KVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR 237
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVA 317
V A G H V+ +G+V WG YG LG GN+ +S P V D + A H A
Sbjct: 238 V--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA 295
Query: 318 TGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+T+ ++ G VY +G C G+S +L H
Sbjct: 296 ---HTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 103 bits (258), Expect = 1e-19, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++
Sbjct: 761 GGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLA 818
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+AFG + +G+ G ++ +P V+ L VV A G F+ L +G
Sbjct: 819 LKSDGTVWAFGYNGYGQLGDGTTSSQ--RTPVQVKDLTG--VVAIAAGKDFSLALKSDGT 874
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ LG+ T P + + V IAAG + +AL S V++
Sbjct: 875 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFAW 928
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ YG
Sbjct: 929 GYNGNGELGNSSTISQSTP---VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYG 983
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG+GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 984 QLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 1041
Query: 350 DGQV 353
D V
Sbjct: 1042 DTNV 1045
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 19/292 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 715 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 772
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 773 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 828
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG T + P + + VV IAAG + LAL S V+S G
Sbjct: 829 GYNGYGQLGDGTTSSQRTP---VQVKDLTGVVAIAAGKDFSLALK---SDGTVWSWGQNT 882
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG+G+ T P Q LL +AAG +H + +DG V WG+ G LG+
Sbjct: 883 YGELGNGTTTRSSVP---VQVALLT-DVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGN 938
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ +S P V + +K I A G Y T + DG V+S+G LG+
Sbjct: 939 SSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN 987
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G ++ AAG ++
Sbjct: 811 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLA 868
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 869 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 924
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + LG+ + + + P+ + I IAAG + LAL S V+S
Sbjct: 925 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALK---SDGTVWSW 977
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+G+ T P I + +AAG + G DG + +WG G
Sbjct: 978 GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 1033
Query: 290 CLGHGNEECESVPKVVQALN 309
LG+G +VP V N
Sbjct: 1034 QLGNGTTVDTNVPHKVIGPN 1053
Score = 42.4 bits (98), Expect = 0.36, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
P+ V+ H + DG V WG+ +G LG G SVP V L +K I A G+
Sbjct: 706 PLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGE 763
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNA 347
T + DG ++++G LG ++
Sbjct: 764 NHTVALRSDGTLHTWGYNGYGQLGDDS 790
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 8/283 (2%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N +V IA G + ++A +G V+ G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQ--MCSMAVVDTG-EVFVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 336
N+ +S P V D V I +T+ ++ G VY +G
Sbjct: 293 NKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ I+
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + D G+V+ +G + G+ G G + +P + +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E V++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRVIEIAA 315
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G V+ +G N +GQLG G++ + P I +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE + + A +A ++ G VY
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRVIEIAACHSAHTSAAKTQGGHVYM-- 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGP-HVVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G+ + +P +V L + + +A G + V + G+V+ +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLG 238
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 148/300 (49%), Gaps = 11/300 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESAS 342
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S +
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPSDT 319
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
I+++ GD T V+ +DG V++FG S LG++ + +
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVISFGHGPSDTSKPTHPE 326
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 15/302 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGTHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Query: 341 AS 342
+
Sbjct: 318 DT 319
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 21/302 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGTHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLT---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
G + E + + ++ A L DV+ H+ G Y FV + + G
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTHAPG 373
Query: 339 ES 340
++
Sbjct: 374 KT 375
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 134/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
++++ GD T V+++DG V++FG S LG++ + +
Sbjct: 238 VVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKR 277
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + ++ +
Sbjct: 184 AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 10/294 (3%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N VV IA G + +A +G VY G
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 269 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 49/321 (15%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNKV 182
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVAC 240
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAACH 293
Query: 268 AWH-AAVVGQDGRVCTWGWGR 287
+ H +A Q G V WG R
Sbjct: 294 STHTSAAKTQGGHVYMWGQCR 314
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 12/259 (4%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
LQ IR AG +L + +++ G + G G+ + P+ ++SL
Sbjct: 16 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC--LGLGDVRSTIEPRRLDSLNG 73
Query: 149 IFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVV 205
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V+
Sbjct: 74 KKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 131
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
++A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 132 EVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIA 187
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
G V G V WG+ G LG GN + P V AL ++ VA G T V
Sbjct: 188 CGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 247
Query: 326 VSEDGDVYSFGCGESASLG 344
++++G VY++G LG
Sbjct: 248 LTDEGQVYAWGANSYGQLG 266
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
I+++ GD T V+ +DG V++FG S LG++ + +
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVISFGHGPSDKSKPTHPE 326
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
+Y++G + GQ G G + P P+++LQG ++ AA G+ + ++ G++Y G +
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
+ GV+G ++ P V +L+ V A G + G + + +LG
Sbjct: 99 --ARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGT 156
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+L + ++AAG + LAL S VYS G G G LGHG
Sbjct: 157 GEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT---SSGQVYSFGEGSFGALGHGDVN 213
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P L++ + V +AAG + +A V GRV TWG +YG LG+G +P+
Sbjct: 214 NRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQ 271
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
V + +A+ VA GD+ ++ G+VY++G S LG
Sbjct: 272 PVPGIE--QAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQ 311
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 16/309 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
A G +S VT G +Y+ GSN + QLG E P + +L+ + A G G
Sbjct: 74 HAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGH 133
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ + D G + A+G + +G+ G G P++++ ++ + A G + L+
Sbjct: 134 MLAVVDNGHLAAWGSNEYGQLGTGEVGAS-AAQPRVLKRIRGAHFARVAAGATHSLALTS 192
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G+VY+F G+ LGH N +P L+ L +V IAAG + A++ SG V
Sbjct: 193 SGQVYSFGEGSFGALGHGDVNNRAKPT-LVQALWPEAIVSIAAGEYFSAAVSL--SGR-V 248
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
++ G G+LG+G + P+ + + Q V VA G H + + G V TWG
Sbjct: 249 FTWGRNKYGQLGNGEFGNAFLPQPVPGIE----QAVQVACGDHHCIALTRWGEVYTWGLH 304
Query: 287 RYGCLGHGN-------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G LG G+ C P V +L D V+ G +F VS ++ G +
Sbjct: 305 SSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGAND 364
Query: 340 SASLGHNAI 348
L ++
Sbjct: 365 EGQLALQSV 373
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
++ AG HS+A+TS G VYSFG S G LGHG +P +++L I+ AAG
Sbjct: 178 ARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEY 237
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G+V+ +G++ +G+ G G + PQ V ++ VQ A G+ L+
Sbjct: 238 FSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFL--PQPVPGIEQ--AVQVACGDHHCIALT 293
Query: 166 REGRVYTFSWGNDARLGH 183
R G VYT+ + +LG
Sbjct: 294 RWGEVYTWGLHSSGQLGQ 311
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWR-----PRPIRSLQGIRIIQ 99
Q G H IA+T G VY++G +SSGQLG G+ E P + SL I Q
Sbjct: 281 QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQ 340
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA-AIGN 158
+AGA + +S Q++ G + E + +Q V P V L + + A A G+
Sbjct: 341 VSAGARHSFFVSPGEQLWGAGAND--EGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGD 398
Query: 159 FFTAVL 164
AVL
Sbjct: 399 HSIAVL 404
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 196
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 197 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 254
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 255 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 314
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 315 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 371
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 372 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 424
Query: 331 DVYSFG 336
S+G
Sbjct: 425 STISWG 430
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 183 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 241
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 242 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 300
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 301 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 358
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 359 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 409
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 410 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 466
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 467 MGYSHSLVIARD 478
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 115 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 172
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 173 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 228
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 229 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHN--SDGK 269
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 140 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 198
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 199 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 251
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 311
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 312 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 357
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 360 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 413
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 414 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 473
Query: 163 VLSRE 167
V++R+
Sbjct: 474 VIARD 478
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 19/297 (6%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG H+ ++ S G VYS+G GQLG GT P ++L +I +G +M
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN--HVIDIHSGVRSSM 96
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + G+ G+ V +P V L I + + + LS G
Sbjct: 97 ALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSENG 153
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+T+ ++ LG+ T P + G + V IAAG Y LAL + V++
Sbjct: 154 TVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---VWA 207
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ T+ P Q+ L V+ +AAG H+ + QDG V WG
Sbjct: 208 WGVNGSGELGDGTTTERHVP-----VQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNT 262
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG G + P V+ L + A VA G Y + V + G+V+S+G LG
Sbjct: 263 YGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDQAGNVWSWGDNSQQQLG 317
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 135/291 (46%), Gaps = 19/291 (6%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+A+ G V+++G+N +GQLG GT P + L GI+ I A M +S+ G
Sbjct: 95 SMALRQDGTVWTWGANENGQLGIGTITNVNAPAQVPGLSGIKAISGGL-AYHGMALSENG 153
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK+ GE G T SP LV L ++ + A G +++ L +G V+ +
Sbjct: 154 TVWTWGKNDNGELGNGT--TTQQNSPVLVAGLSDVTAIAA--GGYYSLALKSDGTVWAWG 209
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
LG T P + G + V+ IAAG + LA+ + V++ G
Sbjct: 210 VNGSGELGDGTTTERHVPVQVAGLTD---VMAIAAGGSHSLAIRQDGT---VWAWGNNTY 263
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G LG G+RT P Q+ NLQ +V VA G +H+ V Q G V +WG LG
Sbjct: 264 GTLGDGTRTHRTRP-----VQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGL 318
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +P V + V+ I + G + + + +DG V+ +G LG
Sbjct: 319 SSNASSLIPVPVTGIEHVREI--SAGGFHSVAMKKDGTVWGWGYNSGGQLG 367
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 16/214 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ S G V+++G N SG+LG GTT E P + L + I AAG ++
Sbjct: 191 AGGYYSLALKSDGTVWAWGVNGSGELGDGTTTERHVPVQVAGLTDVMAI--AAGGSHSLA 248
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I G V+A+G +++G G + + T P V +L++I V A G + + + + G
Sbjct: 249 IRQDGTVWAWGNNTYGTLGDGTRTHR--TRPVQVRNLQHIVAV--AGGGYHSLAVDQAGN 304
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ SWG+++ +LG + + + P P+ G +E+ V +I+AG + +A+ + V+
Sbjct: 305 VW--SWGDNSQQQLGLSSNASSLIPVPVTG-IEH--VREISAGGFHSVAMKKDGT---VW 356
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
G GG+LG G+ + + + + L P
Sbjct: 357 GWGYNSGGQLGDGTYNNTRGIPTLTKAVLDTTSP 390
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG +H A + G V +WG+G G LG G + P + + LN V IH +G ++
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
+ +DG V+++G E+ LG I +
Sbjct: 96 MALRQDGTVWTWGANENGQLGIGTITN 122
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 22/306 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++AV G V++ G N G+LG+GT + P + +L G+ I AAG ++ +
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGV--ISVAAGYYHSLAL 61
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G V+A+G +++G G T T P V +L + + A F L +G V
Sbjct: 62 KSDGTVWAWGLNTYGN--LGDNTTTTRTKPVQVLNLTGVIAIAADYYQSF--ALKSDGTV 117
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPSGMA 225
+++ + ++ LG+ + P + + I VV IAAG + LAL +
Sbjct: 118 WSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGT--- 174
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G+LG+G+ + Q +NL V ++AGA H+ + +G V +WG
Sbjct: 175 VWSWGLNSSGQLGNGTLATQS-----AAVQAVNLTDAVAISAGAAHSLALRANGAVVSWG 229
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG+G + P V LN++K++ A G + + DG V ++G +G
Sbjct: 230 ANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLALKSDGTVTAWGYNAYGQVG 287
Query: 345 HNAIAD 350
+ A A+
Sbjct: 288 NGATAN 293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 143/302 (47%), Gaps = 19/302 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V S+G+N+ GQLG+GTT P + L I+ + AAG ++
Sbjct: 211 AGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLA 268
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V A+G +++G+ G T V SP V +L + V A + + A+ S G
Sbjct: 269 LKSDGTVTAWGYNAYGQVGNGA--TANVLSPIAVSTLSGVTAVSAGVSHSH-AIGSSNGV 325
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++ + LG++T+ N P +L T + +A G + + + + V++
Sbjct: 326 IWGWGLNTYGGLGNNTKVNRSTPGTILLTSG---LQGVAGGAQHTIYVKGDGT---VWAW 379
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G++G G+ R + QL L ++ VAAGA H+ + +G V WG +
Sbjct: 380 GSNTYGQIGDGTPL-----RRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNH 434
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G+ S+P V L + A+ A G + + DG VY++G LG
Sbjct: 435 GQLGDGSTTNRSLPTQVPNLTGIVAL--AAGATHSLALRFDGTVYAWGRNHLGQLGDETC 492
Query: 349 AD 350
D
Sbjct: 493 TD 494
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 35/315 (11%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V+++G N+ GQLG G+T P + +L G I+ AAGA ++
Sbjct: 412 AGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLA 469
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G VYA+G++ G + G + SP V L+ + + A G+ + + + G
Sbjct: 470 LRFDGTVYAWGRNHLG--QLGDETCTDRLSPVAVHYLEKVVAISA--GDNHSLAIHQNGT 525
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-----HPLLGTLENI-PVVQIAAGYCYLLALACQPSG 223
F+WG+D H + D PL+ + I + IAAG + L L + +G
Sbjct: 526 A--FAWGSD----EHGQLCDSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLL--EANG 577
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
A ++ G L G+LG G+ TD+ P I +AAG +A + +G V TW
Sbjct: 578 TA-WACGDNLYGQLGDGTTTDKSAPVPITTLT----NAARLAAGGNTSAALTTNGTVSTW 632
Query: 284 GWGRYGCLGHGNEEC--------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G G LG +V V+ + V ++ T T V DG V+S+
Sbjct: 633 GLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLT--AVKTDGYVHSW 690
Query: 336 GCGESASLGHNAIAD 350
G +S +G + +
Sbjct: 691 GLNDSGQIGDGTLVN 705
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+ S G V+S+G NSSGQLG+GT + ++++ + +AGA ++
Sbjct: 161 AGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQ--SAAVQAVNLTDAVAISAGAAHSLA 218
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V ++G +++G+ G T SP V L NI + AA GN A L +G
Sbjct: 219 LRANGAVVSWGANTYGQLGNGT--TTTSASPVGVSGLNNIKSL-AAGGNHSLA-LKSDGT 274
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V + + ++G+ N + P + TL + V + + A S ++
Sbjct: 275 VTAWGYNAYGQVGNGATANVLSP-IAVSTLSGVTAVSAGVSHSH----AIGSSNGVIWGW 329
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G LG+ ++ + P I LL VA GA H V DG V WG YG
Sbjct: 330 GLNTYGGLGNNTKVNRSTPGTI----LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYG 385
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G G P + L + I VA G + ++ +G V+++G LG
Sbjct: 386 QIGDGTPLRRLTPVQLSTLTGI--IAVAAGANHSLALAANGTVFAWGRNNHGQLG 438
>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
Length = 500
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 198
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 199 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 256
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 257 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 316
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 317 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 373
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 374 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 426
Query: 331 DVYSFG 336
S+G
Sbjct: 427 STISWG 432
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 185 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 243
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 244 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 302
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 303 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 360
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 361 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 411
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 412 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 468
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 469 MGYSHSLVIARD 480
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 117 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 174
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 175 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 230
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 231 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHN--SDGK 271
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 142 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 200
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 201 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 253
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 313
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 314 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 359
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 362 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 415
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 416 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 475
Query: 163 VLSRE 167
V++R+
Sbjct: 476 VIARD 480
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 285 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 327
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 255
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
I+++ GD T V+ +DG V++FG S LG++ + +
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKR 277
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVISFGHGPSDKSKPTHPE 326
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 69 SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 128
SN +G++GHG E+ PR + +L G + A GA T + AG +Y +G G+
Sbjct: 152 SNDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGA---GQGR 208
Query: 129 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
G + P V +L VVQAA G TA ++ GRVYT+ G LGH E
Sbjct: 209 LGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESA 268
Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGLGGKLGHGSRTDEK 246
P + +Q+ ++ +A +G + VY+ G G+LG G RT
Sbjct: 269 CSTPREVASL-----ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM 323
Query: 247 HPRLIEQFQLLN------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
P L+ ++ LQ + A + R+ TWG G G LGHG EE E
Sbjct: 324 SPALLADLSSISRIACTYLQSNLPVKRRHRARQLMM--RMWTWGDGASGQLGHGTEEEEL 381
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLS 360
VP+ V AL V I VA G T ++ G+V+++G G LGH A A + C L +
Sbjct: 382 VPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGA-AILRYCKPLLIE 440
Query: 361 IFQ---YLQIWLN 370
+ +L W N
Sbjct: 441 SLKDSGHLYAWGN 453
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 33/281 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAG 105
QA G H+ A+T G VY++G G LGHG PR + SL + ++
Sbjct: 233 QAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVVVIVVVVV 292
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ +G VYA+G + G+ +G + ++ SP L+ L +I + V
Sbjct: 293 AAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM--SPALLADLSSISRIACTYLQSNLPVKR 350
Query: 166 REG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
R R++T+ G +LGH TE ++ P ++ LE + ++ +AAG + AL
Sbjct: 351 RHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVM-ALEQVNIIAVAAGKAHTAALTS 409
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
Q V++ G G G+LGHG+ L +P+++ + + G
Sbjct: 410 QGE---VWTWGDGSDGQLGHGAAI------------LRYCKPLLIES-------LKDSGH 447
Query: 280 VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 319
+ WG R G LG G EE SVP+ V+A+ K VA G
Sbjct: 448 LYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACG 488
>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
Length = 910
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 32/296 (10%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL------------QGIRIIQAA 101
H+ VT +G ++++G S G+LGHG + +PR + SL +G+++
Sbjct: 271 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVT 330
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G T L++ Q++ FG +FG +G + V P+ VESL + + A G + T
Sbjct: 331 CGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVWHT 388
Query: 162 AVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
A + G+++T+ G+ RLGH + ++P + +E ++A G
Sbjct: 389 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKVACG 447
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ + L SG V ++G + G+LG+ ++D K P +E +LL +A GA+H
Sbjct: 448 HSLTVGLTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYH 502
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
AV+ V TWG G G LGHG+ E P +V+ L D ++A G +YT +
Sbjct: 503 VAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 558
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 29/293 (9%)
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
+P+ S + + A G L++ G+++ +G++S G +GV + V P+LVESL
Sbjct: 252 KPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVESL 309
Query: 147 ------------KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
+ + V G + TA+++ +++TF G LGH + N P
Sbjct: 310 AFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPRE 369
Query: 195 LLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ +L + + +A G + A+ + S +++ G G +LGHG +
Sbjct: 370 V-ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 428
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKV 304
P + N Q V H+ VG G+VCT G YG LG+ + + V
Sbjct: 429 KPTCVPALIEYNFQKVACG----HSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKLPCFV 484
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
L +A G Y V++ +VY++G G + LGH I D + +L+
Sbjct: 485 EDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLV 537
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 137 VTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
V LV+ L++ V+ A G A+++R+G ++T+ + RLGH + ++P
Sbjct: 245 VICDNLVKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 304
Query: 194 PLLGTLENIPV---------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
L+ +L V +Q+A+ C A + +++ G G G LGHG + +
Sbjct: 305 -LVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN 363
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGH 293
+PR +E L L+ + VA G WH A V + G++ TWG G LGH
Sbjct: 364 VAYPREVES--LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH 421
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
G++E P V AL + VA G T ++ G V + G LG N +DG++
Sbjct: 422 GDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGKL 480
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ + S + + Q A G L++ G+V+ +G++S G +G+ + P LVE
Sbjct: 258 PKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVEF 315
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 203
L V A G + T +S G ++T+ G N LGH TE + P + G LE +
Sbjct: 316 LAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQ 375
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPV 262
V+ +A G + ALA S +++ G G G LGHG R +PR + Q+L+ L+ +
Sbjct: 376 VLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGLKTI 429
Query: 263 VVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
VA G WH A V+ Q G ++ TWG G LGHG++E +P V AL D
Sbjct: 430 KVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYN 489
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+A G T ++ G V++ G LG N ++DG++ L+
Sbjct: 490 FHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGRLPCLV 533
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 17/221 (7%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
V +P+ +ES + V Q A G A+++R+G V+T WG ++ RLGH + + PH
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGIDNDFSRPH- 311
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L V +A G + A++ + + G G LGHG+ P+ +
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG- 369
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L LQ + VA G WH+A+ +G++ T+G G +G LGHG+ E P+ VQ L+ +K I
Sbjct: 370 PLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTI 429
Query: 315 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGH 345
VA G + T V+S+ G ++++G G+ LGH
Sbjct: 430 KVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH 470
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 69/340 (20%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H VT +G V+++G S G+LGHG + RP + L + A G
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYH 330
Query: 107 TMLISDAGQVYAFGKD-------------------------------------------- 122
T +S +G ++ +G
Sbjct: 331 TCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALAT 390
Query: 123 ------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG- 168
+FG+ +GV G + V P+ V+ L + ++ A G + TA V+S+ G
Sbjct: 391 SNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGT 450
Query: 169 -----RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+++T+ G+ RLGH ++ + P + L + Q+A G+ +AL SG
Sbjct: 451 NISSRKLFTWGDGDKHRLGHGSKETYLLPT-CVSALIDYNFHQLACGHTMTVALTT--SG 507
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V+++G G+LG+ +D + P L+ Q +L+ ++ GA+H AV+ V TW
Sbjct: 508 H-VFTMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFVEEISCGAYHVAVLTSRSEVFTW 564
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G G G LGHG+ E P V+AL D ++ G T
Sbjct: 565 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFT 604
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +++FG + G LGHG E PR ++ L G++ I+ A G T I
Sbjct: 382 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 441
Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
S +G +++ +G +G + T L+ P V +L + Q A G+
Sbjct: 442 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 499
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG+ + P + L V +I+ G ++ L
Sbjct: 500 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 556
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
S V++ G G G+LGHG D + P +E + N++ + A+ H V G
Sbjct: 557 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 615
Query: 276 QDGRVCT 282
D VC+
Sbjct: 616 ADQSVCS 622
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V + A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGSSGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 269 NKSNQSYPAPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 322
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 47/320 (14%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 150
L ++ + A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 209
V A G + + G VY + + + +LG + N +P P + L+ I V ++A
Sbjct: 183 AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVAC 240
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 267
GY + L L + VY+ G G+LG G+++++ +P ++E+ +++ +
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVIVEKDRIIE---IAACHS 294
Query: 268 AWHAAVVGQDGRVCTWGWGR 287
A +A Q G V WG R
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR 314
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 137/269 (50%), Gaps = 30/269 (11%)
Query: 36 AGEACCRREN--SQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRP 88
AGE +R+ SQA G H +T +GV Y++G G+LGHG + + P P
Sbjct: 853 AGEVPVKRKPPLSQAAVVSCGQQHVALLTEEGV-YTWGKPHQGRLGHGQLLGDSGYVP-P 910
Query: 89 IR----SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+R S+Q ++++ A G T+ + D G VYA+G ++G+ G+ T P LV
Sbjct: 911 MRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQ--LGLGDWDRQTHPTLVT 967
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
LK++F V A G + +A L EGRV+ + WG +LG N +PH L+ ++N
Sbjct: 968 QLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPH-LVAAVQN--A 1024
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
VQ++ GY + L SG V++ GCGL G+LGHG+ P+ ++ Q V
Sbjct: 1025 VQVSTGYAHTAVLT--RSG-EVFTFGCGLHGQLGHGATDKVSIPQRVQGIMGKVAQ---V 1078
Query: 265 AAGAWHAAVVGQDGRVCTWG-----WGRY 288
A G +H VV +V T+G W +Y
Sbjct: 1079 ACGLFHTVVVTSSQQVYTFGRHPQVWKQY 1107
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 24/206 (11%)
Query: 153 QAAI---GNFFTAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLEN 201
QAA+ G A+L+ EG VYT+ + RLGH + P VE +++
Sbjct: 866 QAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVE----TLSIQR 920
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ V+ +A G + LAL VY+ G G+LG G + HP L+ Q + ++
Sbjct: 921 VQVMAVACGQEHTLALC----DNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLK--DVFC 974
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
V VA G +H+A + +GRV WGWG +G LG GN E + P +V A+ + A+ V+TG
Sbjct: 975 VAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQN--AVQVSTGYA 1032
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNA 347
T V++ G+V++FGCG LGH A
Sbjct: 1033 HTAVLTRSGEVFTFGCGLHGQLGHGA 1058
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESL--KNIFVVQAAIGNF 159
G L+++ G VY +GK G +G + G P VE+L + + V+ A G
Sbjct: 873 GQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQE 931
Query: 160 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLA 216
T L G ++WG+ +LG D + HP L T L+++ V +A G + A
Sbjct: 932 HTLALCDNG---VYAWGSSTYGQLG--LGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAA 986
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L + V+ G G+ G+LG G+ + P L+ Q V V+ G H AV+ +
Sbjct: 987 LDGEGR---VWMWGWGVHGQLGQGNAENLNKPHLVAAVQ----NAVQVSTGYAHTAVLTR 1039
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V T+G G +G LGHG + S+P+ VQ + K VA G + T VV+ VY+FG
Sbjct: 1040 SGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYTFG 1098
>gi|118373349|ref|XP_001019868.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89301635|gb|EAR99623.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 403
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 28/303 (9%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
A++SK +Y++G + + GH + P+ I +LQ I + + G + +++ Q
Sbjct: 72 AISSKNELYTWGETKNSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQ 129
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
+Y G + +G G+ G + QL +++KNI + + G+ F+ L +VY+ +
Sbjct: 130 LYVTGHNKYGAC--GISGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGF 187
Query: 176 GNDARLGHHTEPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
H D + + + LE I + I AG+C+ A+ Q G VY+ G G
Sbjct: 188 RQ-----MHGNKEDQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGN 240
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAVVGQDGRVCTWGWGRYGCL 291
+LGHG+ +K P I L ++ V + G H DG+V +WG G G L
Sbjct: 241 FYQLGHGNTKSQKTPLKINN--LSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKL 298
Query: 292 GHGNE------ECESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESAS 342
GH N ES P+ +Q L + K I +A +G + V+S+DG +++FGCG
Sbjct: 299 GHQNSWSHEDPADESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCGSDGR 357
Query: 343 LGH 345
LGH
Sbjct: 358 LGH 360
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G +Y++G NSSG L + ++ E P +++ Q + + G IS ++Y +G
Sbjct: 26 GFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKSVSTGGFFGAA--ISSKNELYTWG 83
Query: 121 KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ + G Q K + PQ + +L+NI V + GN+ L+ + ++Y
Sbjct: 84 ETK--NSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQLYVTGHNKYG 139
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
G + +++ L T++NI + I+AG + L L VYS G + H
Sbjct: 140 ACGI-SGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDI---NQQVYSSGF----RQMH 191
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEEC 298
G++ D+ ++ + +L + + AG H+AVV Q+ G V TWG G + LGHGN +
Sbjct: 192 GNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGNFYQLGHGNTKS 251
Query: 299 ESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGESASLGH 345
+ P + L+ ++ + + G+ T S DG VYS+G G LGH
Sbjct: 252 QKTPLKINNLSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKLGH 300
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 23/313 (7%)
Query: 32 RFLLAGEACCRREN-SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
++L + +N S G H +A+ ++ +Y G N G G +E +
Sbjct: 97 NYILVPQKIMNLQNISHVSCGNWHCLALNNQNQLYVTGHNKYGACGISGIDEINGFQLND 156
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+++ I+I +AG G ++ + QVY+ G +G + + + ++ L+ I
Sbjct: 157 TIKNIQICSISAGDGFSLYLDINQQVYSSGFRQM----HGNKEDQHQYQIKKIKELEGIA 212
Query: 151 VVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ G +AV+++E G VYT+ GN +LGH + P + L I V +
Sbjct: 213 IKHINAGFCHSAVVTQERGEVYTWGSGNFYQLGHGNTKSQKTPLKI-NNLSGIEQVSCSR 271
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR------TDEKHPRLIEQFQLLNLQPVV 263
G Y A G VYS G G GKLGH + DE PR I+ Q +
Sbjct: 272 GEKYCHTTATSSDG-KVYSWGSGYKGKLGHQNSWSHEDPADESRPRPIQYLQEKGIVIAK 330
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC------ESVPKVVQA--LNDVKAIH 315
+G H+AV+ QDGR+ T+G G G LGH E E P+ +Q LN+ K I
Sbjct: 331 SISGGIHSAVLSQDGRLFTFGCGSDGRLGHIEAEKYVYLYREPFPREIQGPFLNN-KIID 389
Query: 316 VATGDYTTFVVSE 328
+ Y ++E
Sbjct: 390 ACSSYYFMAAIAE 402
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 34/305 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+T G V+ +G NS G++ G RP I L+ I+Q + G ++ + +
Sbjct: 95 HTLAITKHGTVWGWGYNSKGEITEGGKNIA-RPVQINGLK--DIVQVSTGLVHSLALDQS 151
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+++G++ +G+ G + P VE L NI ++A G + LS +G+V+ +
Sbjct: 152 GAVWSWGENIYGQLGNGTNQDSSI--PTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAW 207
Query: 174 SWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LG+ TE +++ P L+ LENI + IA G + LAL A+++ G
Sbjct: 208 GRNEFGQLGNGETEKSNI-PR-LVKNLENIEM--IAGGDNHSLALDHDG---AIWAWGYN 260
Query: 233 LGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV----------VAAGAWHAAVVGQDGRVC 281
G++G GS EK +L E+ +PV V+AG H+ + ++G V
Sbjct: 261 SNGQIGDGSSNVYEKDGQLREKRN--KTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVY 318
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGE 339
WGW YG LG+G+ + VP N+V I + TG Y +F V E G +Y++G
Sbjct: 319 AWGWNEYGQLGNGSMKDSKVP----LRNNVGRSIIDIETGSYHSFAVDESGVIYAWGDAT 374
Query: 340 SASLG 344
LG
Sbjct: 375 YGQLG 379
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 27/260 (10%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS+A+ G V+S+G N GQLG+GT ++ P + L I I+ AGA
Sbjct: 137 QVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIVAIE--AGAEH 194
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +S+ G+V+A+G++ FG+ G T+ P+LV++L+NI ++ A G+ + L
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGE--TEKSNIPRLVKNLENIEMI--AGGDNHSLALDH 250
Query: 167 EGRVYTFSWGNDARLGH------------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+G ++ + + ++ ++G + N EP L G V Q++AG +
Sbjct: 251 DGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG--KVKQVSAGIKHS 308
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
AL VY+ G G+LG+GS D K P + + + G++H+ V
Sbjct: 309 TALTENGE---VYAWGWNEYGQLGNGSMKDSKVPLR----NNVGRSIIDIETGSYHSFAV 361
Query: 275 GQDGRVCTWGWGRYGCLGHG 294
+ G + WG YG LG G
Sbjct: 362 DESGVIYAWGDATYGQLGDG 381
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 32/312 (10%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S + S G V++ G N+ GQLG+GT ++ + L ++ + T+ I+ G
Sbjct: 46 STILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDEL--YDVVSLDSDMDHTLAITKHG 103
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +G +S GE +G K + P + LK+I VQ + G + L + G V+ S
Sbjct: 104 TVWGWGYNSKGEI---TEGGKNIARPVQINGLKDI--VQVSTGLVHSLALDQSGAVW--S 156
Query: 175 WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
WG + +LG+ T + P + L NI V I AG + LAL+ V++ G
Sbjct: 157 WGENIYGQLGNGTNQDSSIPTKVE-FLSNI--VAIEAGAEHSLALSNDGK---VWAWGRN 210
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG+G PRL++ + + + +A G H+ + DG + WG+ G +G
Sbjct: 211 EFGQLGNGETEKSNIPRLVKNLENIEM----IAGGDNHSLALDHDGAIWAWGYNSNGQIG 266
Query: 293 HGNEEC-ESVPKVVQALNDVKAI----------HVATGDYTTFVVSEDGDVYSFGCGESA 341
G+ E ++ + N + + V+ G + ++E+G+VY++G E
Sbjct: 267 DGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEYG 326
Query: 342 SLGHNAIADGQV 353
LG+ ++ D +V
Sbjct: 327 QLGNGSMKDSKV 338
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 127/246 (51%), Gaps = 22/246 (8%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G T+L SD G V+ G+++ G+ G + K + V+ L ++ + + + +
Sbjct: 41 AGGYVSTILRSD-GTVWTTGRNNVGQLGNGTE--KDSSYFGKVDELYDVVSLDSDMDH-- 95
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T +++ G V+ WG +++ G TE N P + G + +VQ++ G + LAL
Sbjct: 96 TLAITKHGTVW--GWGYNSK-GEITEGGKNIARPVQINGLKD---IVQVSTGLVHSLAL- 148
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG AV+S G + G+LG+G+ D P +E + V + AGA H+ + DG
Sbjct: 149 -DQSG-AVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNI----VAIEAGAEHSLALSNDG 202
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+V WG +G LG+G E ++P++V+ L +++ I A GD + + DG ++++G
Sbjct: 203 KVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMI--AGGDNHSLALDHDGAIWAWGYN 260
Query: 339 ESASLG 344
+ +G
Sbjct: 261 SNGQIG 266
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS A+T G VY++G N GQLG+G+ ++ P+R+ G II G+
Sbjct: 300 QVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDS--KVPLRNNVGRSIIDIETGSYH 357
Query: 107 TMLISDAGQVYAFGKDSF---GEAEYGVQGTKLV 137
+ + ++G +YA+G ++ G+ +G G ++
Sbjct: 358 SFAVDESGVIYAWGDATYGQLGDGTFGKDGNRIT 391
>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
Length = 484
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ + +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACG 300
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410
Query: 331 DVYSFG 336
S+G
Sbjct: 411 STISWG 416
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ + A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 287 LPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 395
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 396 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 453 MGYSHSLVIARD 464
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
V+ + + LK+ F+++ I F +G++ F N +G P + L
Sbjct: 35 VSKGTIFQRLKSAFLLKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNL 94
Query: 197 GT----------LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
G L + V + +G C +L G ++S G G+LGHG +
Sbjct: 95 GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVE 153
Query: 247 HPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
PRLIE L+ + +V+AA G H + G V +G + G LG GN+ ++VP
Sbjct: 154 APRLIEA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPA 209
Query: 306 QALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
Q + + + I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 210 QIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHN--SDGK 255
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V +HV
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHV 297
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 343
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 346 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 399
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 400 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459
Query: 163 VLSRE 167
V++R+
Sbjct: 460 VIARD 464
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ +I VT V++ G+N SG LG G + PR I +L G +I+ + G G +
Sbjct: 29 SAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHVA 88
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
I+ A G+V+++G + + + G L +P LV + L V++ A G+ T L+ +
Sbjct: 89 IATADGEVFSWGHNGYSQLGNGTTNHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTD 146
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+ + + N ++G + N P + L+N VV IA G L ++A SG +Y
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACG--QLCSMAVLDSG-EIY 203
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ +++ P I Q +++ + VA G H + +G V WG
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVSV--IQVACGYAHTLALTDEGFVYAWGANS 261
Query: 288 YGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG GN+ +++P ++ + + +V A H + +T+ ++ G V +G
Sbjct: 262 YGQLGTGNKCNQALPTLINTDKERMAEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 38 EACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGI 95
+A C ++ G G +A+ T+ G V+S+G N QLG+GTT P + + L G
Sbjct: 69 DALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 154
R+I+ A G+ T+ ++ G+V+A+G ++ G+ G + +P+ V S L+N VV
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKAVVNI 186
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
A G + + G +Y + + + +LG N P + L+ + V+Q+A GY +
Sbjct: 187 ACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVSVIQVACGYAHT 245
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
LAL G VY+ G G+LG G++ ++ P LI + + V + +A
Sbjct: 246 LALT--DEGF-VYAWGANSYGQLGTGNKCNQALPTLINTDK-ERMAEVAACHTSHTSAAK 301
Query: 275 GQDGRVCTWGWGR 287
Q G+V WG R
Sbjct: 302 TQSGQVLMWGQCR 314
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 13/262 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P +R ++ + +AA + ++D +V+A G + G G+ + P+ +++
Sbjct: 15 PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDA 70
Query: 146 LKNIFVVQAAIGN-FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
L +V + G A+ + +G V FSWG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
V+++A G + +AL + V++ G G++G GS ++ PR + L N V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKAVV 184
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G + V G + WG+ G LG GN + P + AL V I VA G
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAH 244
Query: 323 TFVVSEDGDVYSFGCGESASLG 344
T ++++G VY++G LG
Sbjct: 245 TLALTDEGFVYAWGANSYGQLG 266
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV G +Y +G N +GQLG G + P I +LQG+ +IQ A G T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEG 252
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTF 173
VYA+G +S+G+ G + + + P L+ + K AA T A ++ G+V
Sbjct: 253 FVYAWGANSYGQLGTGNKCNQAL--PTLINTDKERMAEVAACHTSHTSAAKTQSGQV--L 308
Query: 174 SWGN-------DARLGHHTEPNDV 190
WG L H + +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332
>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 1149
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 159/346 (45%), Gaps = 59/346 (17%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AGP H +A+TS G VYS+G +G+LGHG + E R R I +L I+ A+ G T +
Sbjct: 558 AGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAV 617
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY FG++SFG + G++G + P++V K VV + G T +L +G
Sbjct: 618 LTKHGQVYVFGENSFG--QLGLKGQQPRLLPEVVPLPKRAIVV--SCGREHTCILLEDGD 673
Query: 170 VYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--QPS 222
+ + +G + P + + L+ ++ + + IA+G + L P
Sbjct: 674 LMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQTPQ 733
Query: 223 GMAV-----------------------------------YSVGCGLGGKLGHGSRTDEKH 247
G V +++GCG G+LG G T +
Sbjct: 734 GSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLGSGDDTPAQR 793
Query: 248 PRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESV--P 302
L + + + + V V G A +G G + +WGW +G LGHG E ESV P
Sbjct: 794 -NLFRRVVVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTP 852
Query: 303 K---VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
K VV+ L+ V I VA G +++ G+VY++ GE+A GH
Sbjct: 853 KEISVVKTLSQV--IQVACGGTFVVALTQCGEVYTW--GEAAFCGH 894
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%), Gaps = 42/315 (13%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPR----PIRSLQGIRIIQAAAG 103
+T+ V+S G++ QLG G ++E E + R P+RS G I + AG
Sbjct: 386 LTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRS--GDHICKLTAG 443
Query: 104 AGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 161
+ I + ++Y +G++SFG+ ++G+ V++P V+ VV A G+F+
Sbjct: 444 SAFAAAIGLQSRRMYLWGQNSFGQCL--MEGSLTVSTPVAVDIPGQYSEVVDVACGSFYA 501
Query: 162 AVLSREGRVYTFSWGNDARLGHHT---------EPNDVEPHPLLGTLE--NIPVVQIAAG 210
A+ G V T WG L PN+ + + + N VV + AG
Sbjct: 502 AIAFSCGSVGT--WGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVALRAG 559
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAW 269
+ LA+ S AVYS G G+LGHG +E+ R+I+ L+ +V A+ G +
Sbjct: 560 PFHCLAIT---SSGAVYSWGMERNGRLGHGDNKNEERMRVIDA---LSSHVIVDASCGCF 613
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H AV+ + G+V +G +G LG ++ +P+VV +AI V+ G T ++ ED
Sbjct: 614 HTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHTCILLED 671
Query: 330 GDVYSFGCGESASLG 344
GD+ + G S+ +G
Sbjct: 672 GDLMACGSVRSSGVG 686
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 134/320 (41%), Gaps = 43/320 (13%)
Query: 60 SKGVVYSFGSNSSGQLGH----GTTEEEWRPR-------PIRSLQGIRIIQAAAGAGRTM 108
SKGVV+++G+ +S + G + W P P R + ++ + GA
Sbjct: 325 SKGVVFTWGNVASVKTGKKLQLSSPSNSWDPPQGSYTLIPTRMAIPVPVLSFSCGAYSCY 384
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIF---------VVQAAI 156
++ +V++ G D + ++ G +K + S +V E +F + +
Sbjct: 385 FLTADNKVFSCGNDDW--SQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRSGDHICKLTA 442
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGY 211
G+ F A + + R + WG ++ E + P+ +IP VV +A G
Sbjct: 443 GSAFAAAIGLQSR-RMYLWGQNSFGQCLMEGSLTVSTPVA---VDIPGQYSEVVDVACGS 498
Query: 212 CYL-LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP------RLIEQFQLLNLQPVVV 264
Y +A +C G + V L K+ D P + I F+ N + V +
Sbjct: 499 FYAAIAFSCGSVG--TWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVAL 556
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
AG +H + G V +WG R G LGHG+ + E +V+ AL+ + + G + T
Sbjct: 557 RAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTA 616
Query: 325 VVSEDGDVYSFGCGESASLG 344
V+++ G VY FG LG
Sbjct: 617 VLTKHGQVYVFGENSFGQLG 636
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTT----EEEWRPRPIRSLQGI-RIIQAAAGAGRTML 109
+IA+ S G +YS+G N+ GQLGHG E + P+ I ++ + ++IQ A G +
Sbjct: 817 AIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTPKEISVVKTLSQVIQVACGGTFVVA 876
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+VY +G+ +F GV+ K P+ + SL++I V A G+ A LS +
Sbjct: 877 LTQCGEVYTWGEAAFCGHGNGVE--KFFLCPKRLASLQDISAVAA--GDRHAAALSYDHT 932
Query: 170 VYTFSWGN 177
+Y +WGN
Sbjct: 933 IY--AWGN 938
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 131/337 (38%), Gaps = 63/337 (18%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ +T G VY FG NS GQLG + P + + R I + G T ++ +
Sbjct: 614 HTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHTCILLED 671
Query: 114 GQVYAFGK---------------------DSF-------GEAEYGVQGT------KLVTS 139
G + A G +F G+ GT V +
Sbjct: 672 GDLMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQT 731
Query: 140 PQ----------LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
PQ L E +K + +G F +L+ G + G++ +LG +D
Sbjct: 732 PQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG---SGDD 788
Query: 190 VEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
L +P V + G+ + +A+ S A+YS G G+LGHG +
Sbjct: 789 TPAQRNLFRRVVVPDFEDVCAVDCGFSFAIAIG---SSGALYSWGWNTHGQLGHGLAVEL 845
Query: 246 KH----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P+ I + L+ Q + VA G + Q G V TWG + G+G E+
Sbjct: 846 GESVFTPKEISVVKTLS-QVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNGVEKFFLC 904
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
PK + +L D+ A VA GD +S D +Y++G G
Sbjct: 905 PKRLASLQDISA--VAAGDRHAAALSYDHTIYAWGNG 939
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 42/260 (16%)
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
G +++++ G+ +A G S G+ G + + +V +++ V G F
Sbjct: 759 GKDFAVILAETGEAFAIGCGSNGQLGSGDDTPAQRNLFRRVVVPDFEDVCAVDC--GFSF 816
Query: 161 TAVLSREGRVYTFSWGNDARLGHHT---------EPNDVEPHPLLGTLENIPVVQIAAGY 211
+ G +Y++ W +LGH P ++ ++ TL V+Q+A G
Sbjct: 817 AIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTPKEIS---VVKTLSQ--VIQVACGG 871
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-----QLLNLQPV-VVA 265
+++AL VY+ G GHG+ +E+F +L +LQ + VA
Sbjct: 872 TFVVALT---QCGEVYT--WGEAAFCGHGNG--------VEKFFLCPKRLASLQDISAVA 918
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTF 324
AG HAA + D + WG G +G+G VP V ALN V + + G TF
Sbjct: 919 AGDRHAAALSYDHTIYAWG---NGPVGNGGAAGVMVPTPV-ALNFVHPVRQLFCGQVNTF 974
Query: 325 VVSEDGDVYSFGCGESASLG 344
V+++ GD+Y +G S G
Sbjct: 975 VITDVGDLYVWGLNTSGQCG 994
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 22/319 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ V G V+ FG N GQLG G T+ +P ++SL+ + I A G T++
Sbjct: 44 GDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLIS 103
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAVLSR 166
++ +++AFG +S G+ G + V PQ++ E NI + A G +A L+
Sbjct: 104 TECNKIFAFGCNSDGQLGVGDLDDRWV--PQMISTDLEKTNNIIALSA--GCHHSAFLTE 159
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
EG VY + +D + G E + P + +N P+ I+ GY Y A S V
Sbjct: 160 EGSVYIWGDNSDGQCGIKNENYLLNPRKI--EFQN-PINSISCGY-YHTAFI---SLGKV 212
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
Y+ G GKLG + P +E L+ + V G H ++ + G+ +G
Sbjct: 213 YTFGEDDNGKLGRSDKLPNDVPEGVE----LDENCISVKCGGSHTIILTESGKAYAFGSN 268
Query: 287 RYGCLGHGNEECE-SVPKVVQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG GN E E S+P+ V + +V I+V G+ + ++++G +Y+ G G + L
Sbjct: 269 FSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLC 328
Query: 345 HNAIADGQVCSLLFLSIFQ 363
N +C+ + +F+
Sbjct: 329 -NEDESTNICTPTTIEMFK 346
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
R P++ + + G T L+ +G+V+ FGK+ FG+ +G TK+V P ++
Sbjct: 34 RNDPVKEI--------SCGDEHTALVCKSGRVFLFGKNDFGQLGFG--HTKIVNKPSCLK 83
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-P 203
SLK + A G T + + +++ F +D +LG + P + LE
Sbjct: 84 SLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNN 143
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV- 262
++ ++AG C+ A + +VY G G+ G + +PR IE FQ P+
Sbjct: 144 IIALSAG-CHHSAFLTEEG--SVYIWGDNSDGQCGIKNENYLLNPRKIE-FQ----NPIN 195
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
++ G +H A + G+V T+G G LG ++ VP+ V+ D I V G
Sbjct: 196 SISCGYYHTAFISL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVEL--DENCISVKCGGSH 252
Query: 323 TFVVSEDGDVYSFGCGESASLG 344
T +++E G Y+FG S LG
Sbjct: 253 TIILTESGKAYAFGSNFSGQLG 274
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 23/237 (9%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I D G V+ FGK F E ++S V +N V + + G+ TA++ + GR
Sbjct: 9 IPDTGAVFTFGKSRFAED---------LSSHFFV---RNDPVKEISCGDEHTALVCKSGR 56
Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY-LLALACQPSGMAVY 227
V+ F + +LG HT+ V L +L+ + +A G + L++ C ++
Sbjct: 57 VFLFGKNDFGQLGFGHTKI--VNKPSCLKSLKPFQSIHVACGKSHTLISTECNK----IF 110
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ GC G+LG G D P++I + ++AG H+A + ++G V WG
Sbjct: 111 AFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNS 170
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G G NE P+ ++ N + +I + G Y T +S G VY+FG ++ LG
Sbjct: 171 DGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFISL-GKVYTFGEDDNGKLG 224
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A S G VY+FG + +G+LG P + + I G T++++++G+
Sbjct: 205 AFISLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDENC--ISVKCGGSHTIILTESGKA 262
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
YAFG + G+ G T+ ++ + +N+ ++ G +A L+ EG++YT G
Sbjct: 263 YAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDG 322
Query: 177 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ +L + E ++ + ++ ++ G C+ + LA
Sbjct: 323 RNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLA 364
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS +T +G VY +G NS GQ G PR I I I + G T
Sbjct: 149 AGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAF 206
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G+VY FG+D G + G P+ VE +N V+ G T +L+ G+
Sbjct: 207 IS-LGKVYTFGEDDNG--KLGRSDKLPNDVPEGVELDENCISVKC--GGSHTIILTESGK 261
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
Y F +LG + E P + T EN+ ++ + G + L + +Y+
Sbjct: 262 AYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEG---KLYT 318
Query: 229 VGCGLGGKL-GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
G G GKL T+ P IE F+ + V+ G H V+ +
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFK--SFFCTYVSCGGCHTMVLAK 365
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
++ G H A+V + GRV +G +G LG G+ + + P +++L ++IHVA G T
Sbjct: 41 ISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHT 100
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIAD 350
+ +E +++FGC LG + D
Sbjct: 101 LISTECNKIFAFGCNSDGQLGVGDLDD 127
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 103 bits (257), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 22/305 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 108
G H+ + G VYS G+N+ GQLG E ++ P + L+G + +Q + GA T
Sbjct: 76 GEEHTSFIAQNGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTA 135
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ D GQ++ +G++ E + G+ + +T+PQ+V+ LKN V + G T V+++
Sbjct: 136 TVCDNGQLFTWGQNC--EGQLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVITQTQ 192
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+++ F G +LG E N+ +P L ++NI V I+ G + L L G A +S
Sbjct: 193 KIFGFGDGKCGQLGLGNECNEYKPRQLQIQMQNI--VAISCGDRHTLFL--NEEGEA-FS 247
Query: 229 VGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G +LG + + + P ++Q L V+AA +A + +G + WG G
Sbjct: 248 CGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVK-VIAANTPMSAALSSEGYLYLWGTGF 306
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G CE PK + + G+ ++ +G VYS+G LG
Sbjct: 307 FGQFDRPT-RCEFAPK--------DLLDICIGNQFICLLDGEGKVYSWGSNMFGELGQ-G 356
Query: 348 IADGQ 352
IA+GQ
Sbjct: 357 IANGQ 361
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 11/278 (3%)
Query: 64 VYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VY +GS++ GQLG + E + P P + + I A G T I+ G VY+ G +
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNN 95
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+ G+ V + ++P LVE LK VQ + G + TA + G+++T+ + +LG
Sbjct: 96 NQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLG 155
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
N P + L+N V ++ G + + ++ G G G+LG G+
Sbjct: 156 IGKSDNMTTPQ--IVDLKNNLAVFVSCGKRNTMVIT---QTQKIFGFGDGKCGQLGLGNE 210
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV 301
+E PR + Q Q+ N+ V ++ G H + ++G + G Y LG N + ++
Sbjct: 211 CNEYKPRQL-QIQMQNI--VAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQSSNI 267
Query: 302 PKVVQALNDVKAIHV-ATGDYTTFVVSEDGDVYSFGCG 338
P V+ + +K + V A + +S +G +Y +G G
Sbjct: 268 PVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTG 305
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 23/287 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H+ V G ++++G N GQLG G ++ P+ I L+ + + G
Sbjct: 126 QISCGAYHTATVCDNGQLFTWGQNCEGQLGIGKSDNMTTPQ-IVDLKNNLAVFVSCGKRN 184
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
TM+I+ +++ FG G+ G + + QL ++NI V + G+ T L+
Sbjct: 185 TMVITQTQKIFGFGDGKCGQLGLGNECNEY-KPRQLQIQMQNI--VAISCGDRHTLFLNE 241
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
EG FS GN+ +LG + + V++ A + A A G
Sbjct: 242 EGE--AFSCGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSA-ALSSEGY 298
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+Y G G G+ +R + L++ + G ++ +G+V +WG
Sbjct: 299 -LYLWGTGFFGQFDRPTRCEFAPKDLLD-----------ICIGNQFICLLDGEGKVYSWG 346
Query: 285 WGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
+G LG G N + P V + D + G F + E+
Sbjct: 347 SNMFGELGQGIANGQQALEPIQVDKIKDKNVKRLYCGANFVFAMGEN 393
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 103 bits (257), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++
Sbjct: 686 GGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLA 743
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+AFG + +G+ G ++ +P V+ L VV A G F+ L +G
Sbjct: 744 LKSDGTVWAFGYNGYGQLGDGTTSSQ--RTPVQVKDLTG--VVAIAAGKDFSLALKSDGT 799
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ LG+ T P + + V IAAG + +AL S V++
Sbjct: 800 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFAW 853
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ YG
Sbjct: 854 GYNGNGELGNSSTISQSTP---VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYG 908
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG+GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 909 QLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 966
Query: 350 DGQV 353
D V
Sbjct: 967 DTNV 970
Score = 101 bits (252), Expect = 5e-19, Method: Composition-based stats.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 21/293 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 640 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 697
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 698 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 753
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG T + P + + VV IAAG + LAL S V+S G
Sbjct: 754 GYNGYGQLGDGTTSSQRTP---VQVKDLTGVVAIAAGKDFSLALK---SDGTVWSWGQNT 807
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG+G+ T P Q+ L V +AAG +H + +DG V WG+ G LG
Sbjct: 808 YGELGNGTTTRSSVP-----VQVALLTDVKAIAAGDYHGVALKKDGSVFAWGYNGNGELG 862
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ + +S P V + +K I A G Y T + DG V+S+G LG+
Sbjct: 863 NSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN 912
Score = 92.8 bits (229), Expect = 3e-16, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G ++ AAG ++
Sbjct: 736 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLA 793
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 849
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + LG+ + + + P+ + I IAAG + LAL S V+S
Sbjct: 850 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALK---SDGTVWSW 902
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+G+ T P I + +AAG + G DG + +WG G
Sbjct: 903 GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 958
Query: 290 CLGHGNEECESVPKVVQALN 309
LG+G +VP V N
Sbjct: 959 QLGNGTTVDTNVPHKVIGPN 978
Score = 42.4 bits (98), Expect = 0.42, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
P+ V+ H + DG V WG+ +G LG G SVP V L +K I A G+
Sbjct: 631 PLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGE 688
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNA 347
T + DG ++++G LG ++
Sbjct: 689 NHTVALRSDGTLHTWGYNGYGQLGDDS 715
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 49 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 114 VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 173
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 174 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 231
Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 232 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 291
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 292 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 348
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 349 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 401
Query: 324 FVVSEDGDVYSFG 336
+V+ D S+G
Sbjct: 402 IIVAADESTISWG 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 167 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 225
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 226 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 284
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 285 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 342
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 343 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 393
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 394 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 450
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 451 MGYSHSLVIARD 462
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 99 PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 156
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E +L+ + +V AA G H + + G V +G + G LG GN+ +++P Q + +
Sbjct: 157 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPSPAQIMYN 212
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 213 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 253
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 54/288 (18%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
GR + G++ +G YG VQ +V+ P SL
Sbjct: 78 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 123
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+++ EG+++++ +LGH + VE L+ L +V A G + LAL
Sbjct: 124 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
S V++ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 181 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 233
Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 234 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 293
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 294 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 341
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 344 RGAAQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWKIRSLAC 397
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 398 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 457
Query: 163 VLSRE 167
V++R+
Sbjct: 458 VIARD 462
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 15/301 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + S VYS G NS GQLG + +P PI++L + I + G
Sbjct: 25 QAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEH 84
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ + LS
Sbjct: 85 SIAVCHKGRVFAWGAGSEGQLGIG-EFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSE 143
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G+V FSWG ++ +LG + + + +LE IP+ Q+AAG + AL+ +
Sbjct: 144 DGQV--FSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSY 201
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
S G G S P I+ + NL + ++ G H AV+ +DG+V T+G
Sbjct: 202 GWGSNSVGQLALSGENSTVQISKPHSIDALK--NLGVIYISCGYEHTAVLTKDGQVFTFG 259
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G L + P++V+ + + + G Y T Y + G+ SLG
Sbjct: 260 DNSSGQLQNNPRGKRRGPQLVEGIKG-QVSKIECGSYHTI-------AYVYTTGQVVSLG 311
Query: 345 H 345
H
Sbjct: 312 H 312
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 133/267 (49%), Gaps = 13/267 (4%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+PR + G+ ++QAA+G ++L+ +VY+ G +S G+ G + + P+ ++
Sbjct: 11 QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQ--LGQKREQNTEQPEPIQ 68
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+L + + + G + + +GRV+ + G++ +LG E ++ P+ + TL I
Sbjct: 69 ALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIK 127
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPV 262
++Q++ G+ + LAL+ V+S G G+LG G ++ + P+ + + + L
Sbjct: 128 IIQVSCGHYHSLALS---EDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPL--A 182
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATG 319
VAAG H+ + G WG G L E S P + AL ++ I+++ G
Sbjct: 183 QVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCG 242
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHN 346
T V+++DG V++FG S L +N
Sbjct: 243 YEHTAVLTKDGQVFTFGDNSSGQLQNN 269
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G Y +GSNS GQL G +T + +P I +L+ + +I +
Sbjct: 182 AQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISC 241
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +++ GQV+ FG +S G+ + +G + PQLVE +K V + G++ T
Sbjct: 242 GYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKR--RGPQLVEGIKGQ-VSKIECGSYHTI 298
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
Y ++ G LGH P H
Sbjct: 299 -------AYVYTTGQVVSLGHGPRPTSNPTH 322
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
D + PR + L L + A+G H+ ++ + RV + G G LG E+ P+
Sbjct: 8 DSRQPRRLNGRDGLEL--LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+QAL + V+ G + V G V+++G G LG
Sbjct: 66 PIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLG 106
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T G +YS+G +++ LGHG W P+ + LQG+ + A G T
Sbjct: 360 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 419
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
+++ +GQ++ FG +FG +G + + V P+ VESL + V + A G + TA
Sbjct: 420 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 477
Query: 163 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
V S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 478 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 536
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
++ + S VY++G G+LG+ + P +E ++ +A G++H AV+
Sbjct: 537 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 591
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+ TWG G G LGHGN E + P VV L + + + G T V+
Sbjct: 592 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 643
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 27/298 (9%)
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 277 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 336
Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEP 187
+ P+ + S++ + A G+F T +++ G +Y SWG N LGH E
Sbjct: 337 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 392
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 393 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 449
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
PR +E L+ L VA G WH A V G+V TWG G G LGHG
Sbjct: 450 PREVE--SLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 507
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ + + +P+ V +L + VA G T + G VY+ G LG N A G
Sbjct: 508 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN 564
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 301 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 360
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
T I+ +G +Y++G + G P+ V L+ ++V A G + TA
Sbjct: 361 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 420
Query: 163 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
V++ G++ F++G+ LGH + P +VE L+G + V ++A G +
Sbjct: 421 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 472
Query: 216 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
A+ S V++ G G G+LGHG + P + L N VA
Sbjct: 473 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 530
Query: 266 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G H+ V + R V T G YG LG+ + +V + + +A G Y
Sbjct: 531 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 588
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
V++ ++Y++G G + LGH + + +
Sbjct: 589 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 617
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G L + + D P+ +E +L+ Q +A G HA +V + G + +WG G+ G L
Sbjct: 276 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 332
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
GHG E PK + ++ + +A GD+ T +++ GD+YS+G G
Sbjct: 333 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG 379
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 49 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 70 VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 129
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 130 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 187
Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 188 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 247
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 248 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 304
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 305 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 357
Query: 324 FVVSEDGDVYSFG 336
+V+ D S+G
Sbjct: 358 IIVAADESTISWG 370
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 123 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 181
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 182 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 240
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 241 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 298
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 299 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 349
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 350 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 406
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 407 MGYSHSLVIARD 418
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 55 PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 112
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E +L+ + +V AA G H + + G V +G + G LG GN+ +++P Q + +
Sbjct: 113 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPSPAQIMYN 168
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 169 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 209
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 117/288 (40%), Gaps = 54/288 (18%)
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
GR + G++ +G YG VQ +V+ P SL
Sbjct: 34 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 79
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+++ EG+++++ +LGH + VE L+ L +V A G + LAL
Sbjct: 80 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
S V++ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 137 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 189
Query: 279 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 314
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 190 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 249
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 250 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 297
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 300 RGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWKIRSLAC 353
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 354 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 413
Query: 163 VLSRE 167
V++R+
Sbjct: 414 VIARD 418
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 2 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGA 61
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ +G ++ +G++ FG+ G+ P L++SL+ +V G TA L+
Sbjct: 62 HSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 119
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 176
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+YS G G G+LG GS ++ K P
Sbjct: 177 IYSFGLGGNGQLGTGSTSNRKSP 199
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
VQ A G + + LS+ V F WG + +LG + L+ +L IP +Q+AA
Sbjct: 1 VQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAA 58
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + L SG A++ G G+LG D P L++ + + V + G
Sbjct: 59 GGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGED 113
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 328
H A + ++G V T+G G YG LGH + E P+ V L +A G +T+ V
Sbjct: 114 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 173
Query: 329 DGDVYSFGCGESASLG 344
G +YSFG G + LG
Sbjct: 174 SGRIYSFGLGGNGQLG 189
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV 263
VQ+A GY + LAL+ V+ G G+LG G + P+LI+ LL + +
Sbjct: 1 VQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKS--LLGIPFMQ 55
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
VAAG H+ V+ G + WG ++G LG +E P ++++L K +++ G+ T
Sbjct: 56 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 115
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIA 349
++++G V++FG G LGHN+ +
Sbjct: 116 AALTKEGGVFTFGAGGYGQLGHNSTS 141
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 55 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 114
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 115 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 172
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
GR+Y+F G + +LG + N P + G
Sbjct: 173 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 205
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 16/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T ++ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 118
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V + A G++ + VL+ +G V+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 177
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + G L+N V IA G + ++A +G VY G
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVYVWGYNGN 234
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG LG G
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 293 NKSNQSYPAPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 346
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
++ ++ G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ +
Sbjct: 151 NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 211 ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVI--VEKDRIIEIAA 315
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S+AV + G VY +G N +GQLG G++ + P I +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QVYA+G +S+G+ G + + +P +VE I + A +A ++ G VY
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPAPVIVEK-DRIIEIAACHSAHTSAAKTQGGHVYM-- 333
Query: 175 WG 176
WG
Sbjct: 334 WG 335
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 144/311 (46%), Gaps = 27/311 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+IA+ +GV YS+GSN GQLG G T +RP I + +I+ GA T+ I
Sbjct: 505 GEFHTIALCEEGV-YSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAI 563
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ +VY++G G+ G++ + +P+ ++ L + V+QAA G +AVL+ + V
Sbjct: 564 TSDYKVYSWGWGVHGQL--GLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYV 621
Query: 171 YTFSWGNDARLG---HHTE--PNDVEPHPL-------LGTLENIPVVQIAAGYC----YL 214
YTF +LG H+ + P V+ L G E I + + +C Y
Sbjct: 622 YTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYH 681
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 273
C + + Y G K+ ++ D H E Q P+ + G WH +
Sbjct: 682 QFYICAKAESSKY------GRKMASNTK-DLNHRFYPETLQFQLQHPITQIFCGNWHYII 734
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ +V TWG+ G LGH N+ +S P++V+AL I VA G + D ++
Sbjct: 735 LTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIM 794
Query: 334 SFGCGESASLG 344
++G + +G
Sbjct: 795 AWGRNDEGKIG 805
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+ G H++A+TS VYS+G GQLG + E + P+ I L ++IQAAAG +
Sbjct: 553 VVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHS 612
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+++ VY FG D +G+ G +++ PQLV+SL + + G F T +S +
Sbjct: 613 AVLTSQRYVYTFGADLYGQLGIGSHYKQVI--PQLVDSLTLDSIYLISCGPFETIAISED 670
Query: 168 GRVYTFSWGND------------ARLGHHTEPNDVE------PHPLLGTLENIPVVQIAA 209
+ F WG + ++ G N + P L L++ P+ QI
Sbjct: 671 QTI--FCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQH-PITQIFC 727
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + + L S VY+ G G+LGH ++ D+ PRL++ L+ + VA GA
Sbjct: 728 GNWHYIILT---SVNQVYTWGYNDCGQLGHYNKIDQSAPRLVK--ALIRRAIIGVAVGAE 782
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNE 296
+ D + WG G +G NE
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENE 809
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 29/313 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 108
G H VT+ +Y++G G+ + P + +L QGI+++ A G T+
Sbjct: 453 GRNHIAFVTNNKELYTWGKECGGR--KDNVQNTCLPMRMENLHNQGIQVVSVACGEFHTI 510
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ + G VY++G + +G+ GV T+ P L+ + + +V G + T ++ +
Sbjct: 511 ALCEEG-VYSWGSNEYGQL--GVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDY 567
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+VY++ WG +LG + N + P + L++ V+Q AAGY + L Q VY+
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQI-DLLDSHKVIQAAAGYAHSAVLTSQR---YVYT 623
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG---- 284
G L G+LG GS + P+L++ L ++ +++ G + + +D + WG
Sbjct: 624 FGADLYGQLGIGSHYKQVIPQLVDSLTLDSI--YLISCGPFETIAISEDQTIFCWGRNYH 681
Query: 285 ------------WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+GR + P+ +Q + G++ +++ V
Sbjct: 682 QFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQV 741
Query: 333 YSFGCGESASLGH 345
Y++G + LGH
Sbjct: 742 YTWGYNDCGQLGH 754
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA AG HS +TS+ VY+FG++ GQLG G+ ++ P+ + SL I + G
Sbjct: 604 QAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFE 663
Query: 107 TMLISDAGQVYAFGKDSF-----GEAEYGVQGTKLVTS---------PQLVESLKNIFVV 152
T+ IS+ ++ +G++ +AE G K+ ++ P+ ++ +
Sbjct: 664 TIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPIT 723
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
Q GN+ +L+ +VYT+ + + +LGH+ + + P L+ L ++ +A G
Sbjct: 724 QIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPR-LVKALIRRAIIGVAVGAE 782
Query: 213 YLLALACQPSGMA 225
+ +A + MA
Sbjct: 783 FSVAFDADDNIMA 795
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
+ + + + LL T + P +IA G ++ A + +Y+ G GG+ + T
Sbjct: 431 KSDSISSNDLLFT--STPRARIACGRNHI---AFVTNNKELYTWGKECGGRKDNVQNT-- 483
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
P +E +Q V VA G +H + ++G V +WG YG LG G+ P ++
Sbjct: 484 CLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLI 542
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++ + + V G Y T ++ D VYS+G G LG ++ +
Sbjct: 543 THISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVEN 587
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H I +TS VY++G N GQLGH ++ PR +++L II A GA
Sbjct: 723 TQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAE 782
Query: 106 RTMLISDAGQVYAFGKD-----------SFGEAEYGVQGTKLVTSPQLVESLKNI 149
++ + A+G++ + G + Q V +P LV L +I
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAPTLVHGLPSI 837
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 26/291 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q A G L++ G+V+ +G++S G +G + + P+LVE
Sbjct: 256 PKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FSCPRLVEF 313
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L V A G + T ++ G +YT WG+ R LG T+ + P + G LE
Sbjct: 314 LAVTNVDFVACGEYHTCAVTTSGDLYT--WGDGTRNAGLLGQGTDVSHWIPKRVSGPLEG 371
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
+ V IA G + ALA S +++ G G G LGHG R P+ + QLL+ L+
Sbjct: 372 LQVFSIACG-TWHSALAT--SNGKLFTFGDGAFGVLGHGDRESLSFPK---EVQLLSGLK 425
Query: 261 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ VA G WH A V+ Q G ++ TWG G LGHG+++ +P V +L D
Sbjct: 426 TIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLID 485
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
+A G T ++ G V++ G LG N +DG++ +L+ S+
Sbjct: 486 YNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG-NPASDGKMPTLVQDSL 535
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 153/289 (52%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AVT+ G +Y++G + ++G LG GT W P+ + L+G+++ A G +
Sbjct: 325 GEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHS 384
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 163
L + G+++ FG +FG +G + + ++ P+ V+ L + ++ A G + TA V
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRES--LSFPKEVQLLSGLKTIKVACGVWHTAAIVEV 442
Query: 164 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+S+ G +++T+ G+ RLGH ++ + P + +L + QIA G +AL
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLP-TCVSSLIDYNFHQIACGQTLTVAL 501
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ + +D K P L+ Q L+ V+ GA H AV+
Sbjct: 502 TT--SGH-VFTMGGTAHGQLGNPA-SDGKMPTLV-QDSLVGEFVEEVSCGAHHVAVLTSR 556
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
+ TWG G G LGHG+ E P +V+AL D +++ G ++TT +
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSI 605
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 194
V +P+ +ES + V Q A G A+++R+G V+T WG ++ RLGH E + P
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGFETDFSCPR- 309
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L V +A G + A+ + + G G LG G+ P+ +
Sbjct: 310 LVEFLAVTNVDFVACGEYHTCAVTTS-GDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSG- 367
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L LQ +A G WH+A+ +G++ T+G G +G LGHG+ E S PK VQ L+ +K I
Sbjct: 368 PLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTI 427
Query: 315 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGH 345
VA G + T V+S+ G ++++G G+ LGH
Sbjct: 428 KVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGH 468
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +++FG + G LGHG E P+ ++ L G++ I+ A G T I
Sbjct: 380 GTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAI 439
Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
S +G +++ +G +G + T L+ P V SL + Q A G
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLL--PTCVSSLIDYNFHQIACGQTL 497
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG+ + P + +L V +++ G ++ L
Sbjct: 498 TVALTTSGHVFTMGGTAHGQLGNPASDGKM-PTLVQDSLVGEFVEEVSCGAHHVAVLT-- 554
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S +Y+ G G G+LGHG D + P L+E + +++ + + H V G
Sbjct: 555 -SRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSG 613
Query: 276 QDGRVCT 282
D VC+
Sbjct: 614 ADQSVCS 620
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 31/330 (9%)
Query: 33 FLLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR- 90
F+L+ C + A+A G H++ + G V+++G N GQLG GTT RP P++
Sbjct: 132 FVLSSSPTCI---APAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTN--RPVPVQV 186
Query: 91 -SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
L GIR + AA + ++ + D G V+A+G +S G+ G +L +P V L +I
Sbjct: 187 GGLSGIRAV--AASSDHSLAVRDDGTVWAWGINSSGQLGDGTTNDRL--TPVQVAGLSSI 242
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V A G+ ++ + +G V+ + + +LG T + + P + G E VV+++A
Sbjct: 243 KRVAA--GDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSE---VVEVSA 297
Query: 210 GYCYLLA----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNL 259
LL LA + G V++ G G+LG G+ TD P + + + N
Sbjct: 298 AKYSLLGSAHVLAVRGDGT-VWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNS 356
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
P+ + G++ AV G DG V WG G LG G S P V AL+ + A+ A+
Sbjct: 357 FPLSNSNGSYSLAVRG-DGTVWAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVS-ASS 414
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
D+ + +DG V+S+G + LG A
Sbjct: 415 DH-ALAMRDDGTVWSWGKNTNGKLGDETTA 443
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 18/296 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+AV + G ++++GSNS GQLG G+T P P+ L+ ++ AAA ++
Sbjct: 560 AGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLE--NVVGAAASFSVSLA 617
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +S G + G T ++P V L +I V + G+ L +G
Sbjct: 618 LRSDGTVWAWGLNSVG--QLGDGSTINRSTPGPVGGLVHIVGVATSGGHSL--ALRNDGT 673
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +D +LG T N +P + G + + A +++ A V++
Sbjct: 674 VWAWGGNHDGQLGDGTTTNQPKPVQVSG------LSGVKAVAAAIVSSAVVRDNGTVWAW 727
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ TD P L+ + +A+G H + DG V WG Y
Sbjct: 728 GDNYSGQLGDGTTTDRLTPVLVSGLSGVK----ALASGNHHFLALRNDGTVWAWGDNYYS 783
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
LG G S P V+ L+DVK I A G+ + V +DG V+++G S LG+
Sbjct: 784 QLGDGTRTQRSTPVQVRGLSDVKLI--AAGENHSMAVRKDGTVWTWGLNTSGQLGN 837
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 25/306 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV G V+++G NSSGQLG GTT + P + L I+ + AAG G ++ +
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLSSIK--RVAAGDGYSLAVHGD 258
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA--VLSREGRVY 171
G V+A+G +S G+ G +L +P V+ L + V AA + + VL+ G
Sbjct: 259 GTVWAWGINSSGQLGDGTTTDRL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGT 316
Query: 172 TFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL-------ALACQPS 222
++WGN+ +LG T + + P + E V IA G + L +LA +
Sbjct: 317 VWAWGNNGSGQLGDGTTTDRLTP---VQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGD 373
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
G V++ G G+LG G+ P + + V+A + HA + DG V +
Sbjct: 374 GT-VWAWGSNSTGQLGDGTTISRSRPAQVNALSGI----TAVSASSDHALAMRDDGTVWS 428
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LG +P V L+ V++ VA G+ + V EDG +++G
Sbjct: 429 WGKNTNGKLGDETTAHRLIPVQVHGLSGVRS--VAAGESHSVSVREDGKAWAWGYRGMGL 486
Query: 343 LGHNAI 348
LG A+
Sbjct: 487 LGDGAM 492
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 35/324 (10%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 94
+AG + +R AG G+S+AV G V+++G NSSGQLG GTT + P ++ L
Sbjct: 236 VAGLSSIKR----VAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSE 291
Query: 95 IRIIQAAA----GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+ + AA G+ + + G V+A+G + G+ G +L +P V L +
Sbjct: 292 VVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRL--TPVQVSELDGVK 349
Query: 151 VVQAAIGNFF-------TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 201
+ A+GN F + L+ G ++WG+++ +LG T + P + L
Sbjct: 350 AI--AVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQ-VNALSG 406
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V ++ + ALA + G V+S G GKLG DE + Q+ L
Sbjct: 407 ITAVSASSDH----ALAMRDDGT-VWSWGKNTNGKLG-----DETTAHRLIPVQVHGLSG 456
Query: 262 V-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
V VAAG H+ V +DG+ WG+ G LG G VP VQ + +A+
Sbjct: 457 VRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHG 514
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
+ V ED ++ +G LG
Sbjct: 515 NRSLAVKEDNTLWVWGSSSLGDLG 538
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 33/314 (10%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-------A 100
++ G H +AV G V+++G+N SGQLG GTT + P + L G++ I +
Sbjct: 301 SLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLS 360
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ ++ + G V+A+G +S G+ G ++ + P V +L I V A+ +
Sbjct: 361 NSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISR--SRPAQVNALSGITAVSASSDHAL 418
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLAL 217
+ +G V+++ + +LG T + + P H L G V +AAG + +++
Sbjct: 419 --AMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSG------VRSVAAGESHSVSV 470
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 276
A G GL LG G+ P Q + L +A+ + V +
Sbjct: 471 REDGKAWAWGYRGMGL---LGDGAMFLSFVP-----VQTMGLTATAQIASHGNRSLAVKE 522
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
D + WG G LG G+ VP + L+DVKA VA G+ + V +G ++++G
Sbjct: 523 DNTLWVWGSSSLGDLGDGSTGAHPVPSSI--LDDVKA--VAAGNDYSLAVRNNGSLWAWG 578
Query: 337 CGESASLGHNAIAD 350
LG + +
Sbjct: 579 SNSIGQLGDGSTTN 592
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 141/347 (40%), Gaps = 82/347 (23%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+S+AV G V+++GSNS+GQLG GTT RP + +L GI + A+ + + + D
Sbjct: 366 YSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVSAS--SDHALAMRDD 423
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+++GK++ G+ +L+ P V L + V A G + + +G+ + +
Sbjct: 424 GTVWSWGKNTNGKLGDETTAHRLI--PVQVHGLSGVRSVAA--GESHSVSVREDGKAWAW 479
Query: 174 S------------------------------------------------WGN-------D 178
WG+ D
Sbjct: 480 GYRGMGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGD 539
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 238
G H P+ + L+++ V AAG Y LA+ S +++ G G+LG
Sbjct: 540 GSTGAHPVPSSI--------LDDVKAV--AAGNDYSLAVRNNGS---LWAWGSNSIGQLG 586
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEE 297
GS T+ P + L+ VV AA ++ ++ + DG V WG G LG G+
Sbjct: 587 DGSTTNRLTPVPVN-----GLENVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTI 641
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P V L V + VAT + + DG V+++G LG
Sbjct: 642 NRSTPGPVGGL--VHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLG 686
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 16/190 (8%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+ + G V+++G N GQLG GTT + +P + L G++ + AA + + ++ D
Sbjct: 663 GHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIVS--SAVVRD 720
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+A+G + G+ G +L +P LV L + + A GN L +G V+
Sbjct: 721 NGTVWAWGDNYSGQLGDGTTTDRL--TPVLVSGLSGVKAL--ASGNHHFLALRNDGTVW- 775
Query: 173 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
+WG++ ++LG T P + G L ++ + IAAG + ++A + G V++ G
Sbjct: 776 -AWGDNYYSQLGDGTRTQRSTPVQVRG-LSDVKL--IAAGENH--SMAVRKDGT-VWTWG 828
Query: 231 CGLGGKLGHG 240
G+LG+G
Sbjct: 829 LNTSGQLGNG 838
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P V + + LL +P G V++ G G+LG G+ T+ P Q+ L +
Sbjct: 143 PAVAVGTQHTLLL----RPDGT-VWAWGPNDYGQLGDGTTTNRPVP-----VQVGGLSGI 192
Query: 263 -VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
VAA + H+ V DG V WG G LG G P V L+ +K VA GD
Sbjct: 193 RAVAASSDHSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLSSIK--RVAAGDG 250
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ V DG V+++G S LG D
Sbjct: 251 YSLAVHGDGTVWAWGINSSGQLGDGTTTD 279
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T G +YS+G +++ LGHG W P+ + LQG+ + A G T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 406
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 162
+++ +GQ++ FG +FG +G + + V P+ VESL + V + A G + TA
Sbjct: 407 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 464
Query: 163 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
V S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 465 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 523
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
++ + S VY++G G+LG+ + P +E ++ +A G++H AV+
Sbjct: 524 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 578
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+ TWG G G LGHGN E + P VV L + + + G T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 630
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 27/298 (9%)
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 264 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323
Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 187
+ P+ + S++ + A G+F T +++ G +Y SWG+ LGH E
Sbjct: 324 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 380 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 436
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
PR +E L+ L VA G WH A V G+V TWG G G LGHG
Sbjct: 437 PREVE--SLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 494
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ + + +P+ V +L + VA G T + G VY+ G LG N A G
Sbjct: 495 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN 551
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 288 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 347
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
T I+ +G +Y++G + G P+ V L+ ++V A G + TA
Sbjct: 348 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 407
Query: 163 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
V++ G++ F++G+ LGH + P +VE L+G + V ++A G +
Sbjct: 408 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 459
Query: 216 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
A+ S V++ G G G+LGHG + P + L N VA
Sbjct: 460 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 517
Query: 266 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G H+ V + R V T G YG LG+ + +V + + +A G Y
Sbjct: 518 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 575
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
V++ ++Y++G G + LGH + + +
Sbjct: 576 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 604
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G L + + D P+ +E +L+ Q +A G HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
GHG E PK + ++ + +A GD+ T +++ GD+YS+G G
Sbjct: 320 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG 366
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HS+AV + G V+S+GSN GQLG + P+ I L G I+Q AAG
Sbjct: 144 QVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAH 203
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ I+++G + +GK+SFG+ G V SP V SL++ + AA G TAVL++
Sbjct: 204 SLAITNSGALLTWGKNSFGQLGLGTNDG--VLSPTCVSSLRSQHIAYAACGEDHTAVLTK 261
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
EG V+TF G+ +LGH++ + P ++ L I V QI G Y L
Sbjct: 262 EGGVFTFGAGSSGQLGHNSLSHHCSPQMVVD-LMGIVVTQITCGRFYAL 309
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA-GAGRTML 109
G H+I + G +YS GSN GQ G + R I + + +RI ++ GA +
Sbjct: 42 GLNHTILLLQDGQIYSCGSNDYGQTGRQRNNK--RFARIDAFESMRITNVSSNGANHNLA 99
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
I+D +YA+G +S G+ Q K +P+ ++SL VVQ A G + + +G
Sbjct: 100 INDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDG 159
Query: 169 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V FSWG++ +LG + + VEP +L L +VQIAAG + +LA SG A+
Sbjct: 160 TV--FSWGSNRYGQLGIDSNVSSVEPKQIL-KLSGFYIVQIAAGGAH--SLAITNSG-AL 213
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGW 285
+ G G+LG G+ P + L Q + AA G H AV+ ++G V T+G
Sbjct: 214 LTWGKNSFGQLGLGTNDGVLSPTCVSS---LRSQHIAYAACGEDHTAVLTKEGGVFTFGA 270
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
G G LGH + P++V L + + G +
Sbjct: 271 GSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRF 306
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++AV G ++++G N GQLGHG + PR + +L+ I+AAAG ++++
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119
Query: 111 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++A +VYAFG + FG + G++ K +P +V L+ V G + L + +
Sbjct: 120 TEANKVYAFGSNVFG--QLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQ 177
Query: 170 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG----- 223
+Y++ + +LG H + V H L + V QI+ GY + +A + +G
Sbjct: 178 LYSWGRNDCGQLGLGHYRSSPVPEH--LTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP 235
Query: 224 -MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
VY+ G G G+LGH P++++ LL VAAG + +A + + ++ T
Sbjct: 236 LEKVYTWGRGEEGQLGHDELYSRCVPKVVQ--TLLARGIRAVAAGGFSSAAIDEAKQLYT 293
Query: 283 WGWGRYGCLGHGNE 296
WG R G LGHG++
Sbjct: 294 WGCSREGQLGHGDD 307
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RP-IRSLQGIRIIQAAA 102
A G H++A+T +G VYS+G ++G LGHG ++ + P RP I S+ I I A
Sbjct: 3 AACGKLHTVALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--AC 59
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T+ + G ++ +G++ +G+ +G K P+ VE+L+ ++AA G +
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHG--DCKTHKLPRRVEALEKKICIKAAAGGQHSL 117
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
VL+ +VY F +LG ++ ++ L V I GY + +AL
Sbjct: 118 VLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALL---K 174
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG---- 278
+YS G G+LG G P + F+ +Q + A V G
Sbjct: 175 SEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVP 234
Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+V TWG G G LGH VPKVVQ L VA G +++ + E +Y++
Sbjct: 235 PLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTW 294
Query: 336 GCGESASLGH 345
GC LGH
Sbjct: 295 GCSREGQLGH 304
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQI 207
V AA G T L+ EGRVY++ N A LGH + + P PL+ ++ +I I
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSI--TTI 57
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + LA+ + +++ G G+LGHG K PR +E + + AAG
Sbjct: 58 ACGEFHTLAVGQDGT---LWTWGRNQYGQLGHGDCKTHKLPRRVEALE--KKICIKAAAG 112
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
H+ V+ + +V +G +G LG + + P +V L H+ G + +
Sbjct: 113 GQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMAL 172
Query: 327 SEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRHLPTF 380
+ +YS+G + LG V L++F+ Q+ Y H F
Sbjct: 173 LKSEQLYSWGRNDCGQLGLGHYRSSPVPE--HLTMFKKSQVQQISCGYDHNIAF 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 30/268 (11%)
Query: 98 IQAAAGAGRTMLISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ AA G T+ +++ G+VY++G + G Q L+ S+ +I + A
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--A 58
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAG 210
G F T + ++G ++T+ +LGH H P VE LE ++ AAG
Sbjct: 59 CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVE------ALEKKICIKAAAG 112
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAW 269
+ L L VY+ G + G+LG S+ P ++ + + + + G
Sbjct: 113 GQHSLVLT---EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGV--CHITCGYS 167
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 328
H+ + + ++ +WG G LG G+ VP+ + + ++ G D+ VSE
Sbjct: 168 HSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227
Query: 329 DG--------DVYSFGCGESASLGHNAI 348
VY++G GE LGH+ +
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDEL 255
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIR 96
EA ++ +A AG HS+ +T VY+FGSN GQLG + P + L+
Sbjct: 99 EALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSG 158
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ G +M + + Q+Y++G++ G+ G + V P+ + K V Q +
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPV--PEHLTMFKKSQVQQISC 216
Query: 157 GNFFTAVLSRE---------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G E +VYT+ G + +LGH + P ++ TL + +
Sbjct: 217 GYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVP-KVVQTLLARGIRAV 275
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
AAG + A +Y+ GC G+LGHG
Sbjct: 276 AAGG---FSSAAIDEAKQLYTWGCSREGQLGHG 305
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 125/268 (46%), Gaps = 24/268 (8%)
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
Q A G+ L + G+V+ +G++ G +G + P+LVESL V A G
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYIACGE 286
Query: 159 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
F T V++ G +Y WG N LGH T + P + G LE + V+ +A G +
Sbjct: 287 FHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 344
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
A S +++ G G G LGHG R +P+ +E L + + VA G WH+A +
Sbjct: 345 ---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWHSAAI 399
Query: 275 ----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
++ TWG G LGHG++E + VP VQAL D VA G T
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTV 459
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQ 352
++ G V++ G + LG N ADG+
Sbjct: 460 ALATSGHVFTMGSSNNGQLG-NPKADGK 486
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 100
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 278 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 337
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 338 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 395
Query: 161 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 396 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 454
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ +ALA + V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 455 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 509
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 510 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 565
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 143 VESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGT 198
+ESL +++V Q A G+ + +R+G V+T WG + RLGH T+ + P L+ +
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVES 273
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQL 256
L V IA G + + SG +Y G G G LGHG+ P+ + L
Sbjct: 274 LAVSNVEYIACGEFHTCVVTA--SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PL 329
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
LQ + VA G+WH+A+ G++ T+G G +G LGHG+ E + PK V+AL+ +A+ V
Sbjct: 330 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 389
Query: 317 ATGDYTTFVVSE----------DGDVYSFGCGESASLGH 345
A G + + + E ++++G G+ LGH
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGH 428
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 25/326 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G H T +G V+++G G+LGHGT + RP+ + SL + A G
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 288
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNF 159
T +++ +G +Y +G S+ G GT K V+ P L+ + V+ A G++
Sbjct: 289 TCVVTASGDLYDWGDGSYNAGLLG-HGTGVSHWLPKRVSGP-----LEGLQVLSVACGSW 342
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A+ G+++TF G LGH + P + L +++A G + A+
Sbjct: 343 HSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA-LSGFRAMKVACGVWHSAAIV- 400
Query: 220 QPSGMA--------VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ SG A +++ G G +LGHG + + P ++ N VA G
Sbjct: 401 EISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQ--VACGHSMT 458
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ G V T G G LG+ + + V L + ++ G ++ +
Sbjct: 459 VALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSE 518
Query: 332 VYSFGCGESASLGHNAIADGQVCSLL 357
VY++G G + LGH ++ D + +L+
Sbjct: 519 VYTWGMGANGRLGHGSVEDKKKPTLV 544
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+A+T+ G V+S+GSN+ GQLGH + PR I+++ ++Q A+G +
Sbjct: 102 GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 161
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G++YA+G +S+G+ G K V P L++SL + + A G + +S+ G
Sbjct: 162 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 220
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+ F WG + +LG + + P L TL ++ V I+ G + + L + V+
Sbjct: 221 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 274
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGHGS ++E PR + F+L+ + +A G H A V G++ +G G
Sbjct: 275 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 332
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG G S P++V+
Sbjct: 333 GVGQLGIGMVGNHSTPQIVR 352
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 25/307 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIR-----SLQGIRIIQAAAGA 104
G H++ +T +G +Y+ G+N GQLGH T RPR R SL+ I + G
Sbjct: 44 GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGT 103
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
++ +++ GQV+++G ++ G +AE G Q T P++++++ VVQ A G +
Sbjct: 104 AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYH 158
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
L+ G +Y +WG+++ +LG T V L+ +L +P+ IA G + + A
Sbjct: 159 CLALTNNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFA 214
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG A++ G G+LG +P + + L ++ ++ G + + +G
Sbjct: 215 VSKSG-AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEG 271
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGC 337
V T G G +G LGHG+ E VP+ V L K +A G +T V G +Y FG
Sbjct: 272 GVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGL 331
Query: 338 GESASLG 344
G LG
Sbjct: 332 GGVGQLG 338
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +G+ + G+LG G EEE PR + Q +++ G T+ ++ G++YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 122 DSFGEAEYGVQGTKLVTSP---------QLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
+ G+ G L T P + + SL+N + + G + L+ G+V
Sbjct: 63 NDHGQL-----GHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQV-- 115
Query: 173 FSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
FSWG++A +LGH E N +P P ++ + VVQIA+G + LAL + +Y+
Sbjct: 116 FSWGSNAVGQLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAW 171
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T EK P L + +A G H+ V + G + WG +G
Sbjct: 172 GSNSYGQLGIGT-TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 230
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG + P ++ L + +++ GD + ++ +G V++ G G LGH + +
Sbjct: 231 QLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCS 290
Query: 350 DGQVCSLLF 358
+ V +F
Sbjct: 291 NEIVPRKVF 299
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 105
Q +G H +A+T+ G +Y++GSNS GQLG GTT E+ P I+SL G+ I A G
Sbjct: 151 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 210
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G ++ +GK++FG + G+ P + +L+++ V + G+ F+ L+
Sbjct: 211 HSFAVSKSGAIFGWGKNTFG--QLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 268
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
EG V+T G +LGH + N++ P + L + QIA G + LA PS
Sbjct: 269 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 325
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
+Y G G G+LG G + P+++
Sbjct: 326 IYGFGLGGVGQLGIGMVGNHSTPQIV 351
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 149/308 (48%), Gaps = 19/308 (6%)
Query: 44 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
N AIAG HS+A+TS G V+++GSN +GQLG GTT+ +P + +L+ I I A+
Sbjct: 108 NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAI-ASK 166
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G L SD G V+ +G++ +G+ G + +P SL I + A G + +
Sbjct: 167 GLHNLALKSD-GTVWTWGRNIYGQLGDGTTTDR--NTPVQTRSLNTIISI--AGGGYHSL 221
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+G ++T+ +LG T N P L+ ++++ +++ + +L +
Sbjct: 222 AQKADGTIWTWGLNQYGQLGDGTITNRTIP-VLVNGIKDVSMIRCGGDHSIVLK-----N 275
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
++ G G+LG S + P + L N+ + + G H+ ++ DG V T
Sbjct: 276 NGTIWIWGFNQHGQLGDRSTDNRSTP--VPMGDLKNI--MTIDGGGDHSLILKSDGTVWT 331
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG G LG G + P L++V AI A+G+ + + DG ++++G +
Sbjct: 332 WGNNENGQLGDGTTMSRATPIQASTLSNVTAI--ASGEQHSIALKSDGTIWAWGSNRNGQ 389
Query: 343 LGHNAIAD 350
LG +I++
Sbjct: 390 LGDGSISN 397
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 143/300 (47%), Gaps = 22/300 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G HSIA+ S G V ++G N GQLG GT + P ++ L + I A GA
Sbjct: 62 QVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAI--AGGAWH 119
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ ++ G V+ +G + G+ G TK P V +LKNI + + L
Sbjct: 120 SVALTSDGTVWTWGSNWAGQLGDGT--TKSRNKPVQVNNLKNITAIASK--GLHNLALKS 175
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V+T WG + +LG T + P + T ++ IA G + LA Q +
Sbjct: 176 DGTVWT--WGRNIYGQLGDGTTTDRNTP---VQTRSLNTIISIAGGGYHSLA---QKADG 227
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+++ G G+LG G+ T+ P L+ + +++ + G H+ V+ +G + WG
Sbjct: 228 TIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSM----IRCGGDHSIVLKNNGTIWIWG 283
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ ++G LG + + S P + L ++ I GD+ + ++ DG V+++G E+ LG
Sbjct: 284 FNQHGQLGDRSTDNRSTPVPMGDLKNIMTID-GGGDH-SLILKSDGTVWTWGNNENGQLG 341
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 17/264 (6%)
Query: 44 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+N AIA G H++A+ S G V+++G N GQLG GTT + P RSL II A
Sbjct: 158 KNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAG 215
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ G ++ +G + +G+ G + + P LV +K++ +++ G +
Sbjct: 216 GGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTI--PVLVNGIKDVSMIRC--GGDHSI 271
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
VL G ++ + + +LG + N P P+ G L+NI + + +L S
Sbjct: 272 VLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPM-GDLKNIMTIDGGGDHSLILK-----S 325
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V++ G G+LG G+ P I+ L N+ +A+G H+ + DG +
Sbjct: 326 DGTVWTWGNNENGQLGDGTTMSRATP--IQASTLSNV--TAIASGEQHSIALKSDGTIWA 381
Query: 283 WGWGRYGCLGHGNEECESVPKVVQ 306
WG R G LG G+ S P +V+
Sbjct: 382 WGSNRNGQLGDGSISNRSTPVLVK 405
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
++Q + G+F + L +G V T+ +LG T + P + L N V IA G
Sbjct: 60 ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQ-VKDLNN--VTAIAGG 116
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAW 269
+ +AL + V++ G G+LG G+ P Q+ NL+ + +A+
Sbjct: 117 AWHSVALTSDGT---VWTWGSNWAGQLGDGTTKSRNKP-----VQVNNLKNITAIASKGL 168
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
H + DG V TWG YG LG G + P ++LN + I +A G Y + D
Sbjct: 169 HNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTI--ISIAGGGYHSLAQKAD 226
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLL 357
G ++++G + LG I + + L+
Sbjct: 227 GTIWTWGLNQYGQLGDGTITNRTIPVLV 254
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G P+ + L GI + Q +AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEA 201
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ FG + G+ T+ SP L+E+L N V A G TA+L+
Sbjct: 202 HSMALSMSGNIYSWGKNEFG--QLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLG--K 316
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIP 339
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + EY K + +++
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSGGKPF----------EYDNYSMKHLRFESILQE 137
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLSGI 191
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG +YS G G+LG + P LIE L N +
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G H A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H + ++S G + + + S L + LQ +IIQ G ++ +
Sbjct: 105 GADHMLILSSGGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S G+++A+G++ G+ G + T+PQ+VE L I + Q + G + LS G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNI 212
Query: 171 YTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
Y SWG + +LG HTE D L+ L+N V +A G + AL Q G+ ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSHT-ALLTQ-DGL-LF 265
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S +E P L+ + L + +A G WH A V G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVAE--LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 287 RYGCLGHG--NEECESVPKVVQALNDVK 312
+ G LG+G ++ +P V + D+K
Sbjct: 324 KEGQLGNGGTRDQLIPLPMKVSSNEDLK 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G +YS+G N GQLG TE + P I +L ++ A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T L++ G ++ FG G + G T+ P LV L V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G + +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 11/286 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y +GS G+LG G EEE PR + Q + QAA G T+L++ G++Y G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 179
+ G+ + PQ + +L+N V Q + G + L+ G++ FSWG++A
Sbjct: 63 NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+LGH + ++ ++ VVQI+ G+ + LAL + +++ G G+LG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT---NSGELFAWGANEYGQLGL 176
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
G+ T +K P L + +A G H+ V + G + WG +G LG + +
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
P ++ L + +++ GD + ++++G V++ G G LGH
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGH 281
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 105
QA G H++ +T G +Y+ G+N GQLGH T RP+ I +L+ + Q + G
Sbjct: 40 QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ +++ GQ++++G ++ G+ + + +P++++S+ VVQ + G+ L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
G + F+WG + +LG T V L+ +L IP+ IA G + + A SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
A++ G G+LG +P ++ + L ++ ++ G + + Q+G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
G G +G LGHG E +P++V L K +A G +T V G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 104
+Q G HS+A+T+ G ++S+GSN++GQLGH + PR I+S+ ++Q + G
Sbjct: 92 TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ ++++G+++A+G + +G+ G G K+ T+ LV+SL I + A G + +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT-LVKSLAGIPIAFIACGGNHSFAV 210
Query: 165 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
S+ G + F WG + +LG + + P L TL ++ V I+ G + + L Q
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 280
G V++ G G G+LGHG+ +E PR++ F+L+ + +A G H A V G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
+Y +G GE G + V +P+ ++ + V QAA G T +L+++G++YT
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
+ +LGH T + + LEN V Q++ G + LAL + ++S G G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119
Query: 236 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
+LGH PR+I+ + V ++ G H + G + WG YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177
Query: 295 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
+ VP +V++L + +A G +F VS+ G ++ +G LG N +
Sbjct: 178 T-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ A G H+I V++ G V + G N GQLGHG T E P+ IRSL+ + +
Sbjct: 651 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 710
Query: 106 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
T+L + G +Y FG++ +G+ + + + PQ VE+L + +V A G + T
Sbjct: 711 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 768
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
V++ G+ + F + +LG T N + P + G LE ++I GY + +AL S
Sbjct: 769 VVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 825
Query: 223 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 270
G +++ G G+LG G S T + RLI++ + ++ V +A G +H
Sbjct: 826 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 883
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V +G + +G +G LG G+ P + + VA G Y T V++
Sbjct: 884 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+S G NS G+LGHG T I++LQ IIQ AG T++++ G+V+ G +
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 623
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G+ G GT V+ + + + A G T ++S +GRV T + +LG
Sbjct: 624 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 681
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 241
H ++ P ++ +LEN V ++ Y Y LAC+ + +Y+ G G+LGH
Sbjct: 682 HGNTTSESVPK-IIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 739
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
D K P+ +E L + Q V VA G +H VV G+ +G YG LG E +
Sbjct: 740 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797
Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
P V+ L + + + G Y T + +++FG + LG
Sbjct: 798 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 841
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 26/261 (9%)
Query: 107 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T+ D G+ V++ G++S+GE +G ++ S + +++L+ ++Q GN T VL
Sbjct: 553 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 610
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G+V+T + ++ + G + L IP + + + C+ + +
Sbjct: 611 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 662
Query: 225 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
V + G G+LGHG+ T E P++I + N +V+ +H + +DG
Sbjct: 663 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 720
Query: 280 V---CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ T+G YG LGH + +P+ V+AL+D + + VA G Y T VV+ G ++FG
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFG 780
Query: 337 CGESASLG----HNAIADGQV 353
+ LG N +A QV
Sbjct: 781 KNDYGQLGIDTMENQLAPVQV 801
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+IAV+ GV+Y FG N+ GQLG G T E P PI G R+ AAG T++++
Sbjct: 883 HTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGG 942
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +DS E E + +SP Q+ L + ++QA + + L++
Sbjct: 943 KEDDKNERDSGNEKE---ELAACFSSPRLQMYMILATLRILQANLSQMLRSGLAK 994
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 144/315 (45%), Gaps = 18/315 (5%)
Query: 31 LRFLLAGEA--CCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 86
L FL + A CC + HS A S G VY +GSN + QL G E+ P
Sbjct: 362 LYFLASDYASNCCSGPDENCNNSTSHSNANLSGSCGEVYVWGSNCTHQLAEGGQEKITTP 421
Query: 87 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES- 145
+ + Q AG T LI G V A GK S+G G V L +
Sbjct: 422 KYSAVFTDCQ--QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKK 479
Query: 146 -LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
+K I + + G+ + L+ G VY++ G+ +LGH T P + G L V
Sbjct: 480 YVKKISSSKGSDGH--SLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVV 537
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
++AGY + A+ +Y+ G G G+LGH + + P ++ + + L V
Sbjct: 538 KCVSAGYRHSAAVT---EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----V 590
Query: 265 AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
A G H V QDG+ + ++G G G LGHG+ + PKV++ALN + VA G ++
Sbjct: 591 ACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSS 650
Query: 324 FVVSEDGDVYSFGCG 338
V+ G +Y++GCG
Sbjct: 651 LAVTSSGQLYAWGCG 665
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 147/294 (50%), Gaps = 15/294 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSLQGIRIIQAAAGA- 104
Q AG + + S G V + G S G+LG G + P+ P+ + ++ I ++ G+
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSD 491
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAV 163
G ++ ++ G+VY++G +G+ +G T+ + P+LV+ L V + G +A
Sbjct: 492 GHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKI--PKLVKGPLVGKVVKCVSAGYRHSAA 549
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G +YT+ G RLGH + P + ++E++ +V + LA G
Sbjct: 550 VTEDGELYTWGDGEFGRLGHDYTSSKNFPTKV-QSIESVGLVACGGSH----TLAVSQDG 604
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
++S G G GKLGHG + P++IE L ++ V A G+ + V G++ W
Sbjct: 605 KTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKV--ACGSQSSLAVTSSGQLYAW 662
Query: 284 GWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G G LG G+ E ++ P++V+ L + + +A GD ++ + +VY++G
Sbjct: 663 GCG--AILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWG 714
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 16/281 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 101
++ S + GHS+A+T+ G VYS+G G+LGHGT + P+ ++ L G + +
Sbjct: 482 KKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVS 541
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +++ G++Y +G FG + +K P V+S++++ +V A G T
Sbjct: 542 AGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSK--NFPTKVQSIESVGLV--ACGGSHT 597
Query: 162 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+S++G+ +++F G + +LGH ++P ++ L + + ++A G LA+
Sbjct: 598 LAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPK-VIEALNGLYIRKVACGSQSSLAVT-- 654
Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S +Y+ GCG LG GS PRL+E Q + V +A G H + +
Sbjct: 655 -SSGQLYAWGCG--AILGCGSAEYTALRPRLVEDLQSKRM--VDIACGDSHVIALTHESE 709
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
V WG G G G+ + + PK V L+ V V+ G
Sbjct: 710 VYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAG 750
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+VY +G + + G G + +T+P+ + V+A G F T ++ +G V
Sbjct: 397 GEVYVWGSNCTHQLAEG--GQEKITTPKYSAVFTDCQQVEA--GQFCTFLIYSDGTVGAC 452
Query: 174 SWGNDARLGHHTEPN-DVEPHPLLGT--LENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
G+ RLG N V PL ++ I + + G+ +LA +G VYS G
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGH----SLALTTTG-EVYSWG 507
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G GKLGHG+ + +K P+L++ L+ V+AG H+A V +DG + TWG G +G
Sbjct: 508 DGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGR 566
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGH 345
LGH ++ P VQ++ V VA G T VS+DG ++SFG GE+ LGH
Sbjct: 567 LGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAVSQDGKTIWSFGGGENGKLGH 620
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 18/180 (10%)
Query: 51 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++AV+ G ++SFG +G+LGHG T + +P+ I +L G+ I + A G+ ++
Sbjct: 593 GGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLA 652
Query: 110 ISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +GQ+YA+G + G AEY P+LVE L++ +V A G+ L+
Sbjct: 653 VTSSGQLYAWGCGAILGCGSAEY------TALRPRLVEDLQSKRMVDIACGDSHVIALTH 706
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
E VY +WGN+A GH P P ++G L+ + V Q++AG + +A P+
Sbjct: 707 ESEVY--AWGNNAMGQCGQGHAQSP-ITRPKRVIG-LDGVSVHQVSAGTSHSVAWTALPT 762
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 226 VYSVG----CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDG 278
+YS G CG G G+LG G + P+ F ++ + + G+ H+ + G
Sbjct: 443 IYSDGTVGACGKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTG 501
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGC 337
V +WG G YG LGHG + +PK+V+ K + + Y + V+EDG++Y++G
Sbjct: 502 EVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGD 561
Query: 338 GESASLGHN 346
GE LGH+
Sbjct: 562 GEFGRLGHD 570
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATG- 319
V AG + ++ DG V G G YG LG G+ SVPK + L D VK I + G
Sbjct: 433 VEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPK--KPLFDKKYVKKISSSKGS 490
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
D + ++ G+VYS+G G+ LGH + ++ L+
Sbjct: 491 DGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLV 528
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 150/335 (44%), Gaps = 35/335 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGS-----NSSGQLGHGTTE--EEWRPRPIRSLQGIRII 98
S ++GP + S G V+ +G NSS LG + P+P+ S + +
Sbjct: 210 SSVVSGPDD---IESLGDVFIWGEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVN 266
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
G L++ G+++ +G+DS G +G K P+LV+SL V A G
Sbjct: 267 YIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFD--KDYGKPRLVDSLAITSVSFVACGE 324
Query: 159 FFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
+ T +S G +YT+ G N LGH T+ + P + G LE VV IA G +
Sbjct: 325 YHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTAL 384
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVG 275
+ S +++ G G G LGHG R +P+ + QLL+ + V VA G WH A +
Sbjct: 385 IT---SNGKLFTFGDGTLGVLGHGDRESVAYPK---ELQLLSGHKAVKVACGVWHTAAII 438
Query: 276 Q-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ ++ TWG G LGH N+E P V AL D + VA G
Sbjct: 439 EVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSL 498
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
T ++ G V++ G LG N +DG+V L+
Sbjct: 499 TVALTASGHVFTMGSKAYGQLG-NPTSDGKVPILV 532
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 25/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ AV+ G +Y++G ++++G LGHGT P+ + L+G +++ A GA T
Sbjct: 323 GEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHT 382
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
LI+ G+++ FG + G +G + + V P+ ++ L V+ A G + TA +
Sbjct: 383 ALITSNGKLFTFGDGTLGVLGHGDRES--VAYPKELQLLSGHKAVKVACGVWHTAAIIEV 440
Query: 165 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
S +++T+ G+ RLGH + ++P + L + +Q+A G+
Sbjct: 441 NDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQP-TCVAALADYNFLQVACGHSLT 499
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL SG V+++G G+LG+ + +D K P L+ +L ++ G H AV+
Sbjct: 500 VALTA--SGH-VFTMGSKAYGQLGNPT-SDGKVPILVRD-KLQGETVEEISCGTHHVAVL 554
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
+ TWG G G LGHG+ E + P +V+AL + ++A G ++TT +
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCI 606
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 24/271 (8%)
Query: 114 GQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G+V+A G S G ++ + L+ P + + ++ ++ + + A+++R+G ++T
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHI--ALVTRQGEIFT 286
Query: 173 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
WG D+ RLGH + + +P L+ +L V +A G + A++ + + G
Sbjct: 287 --WGEDSGGRLGHGFDKDYGKPR-LVDSLAITSVSFVACGEYHTCAVSIS-GDLYTWGDG 342
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G LGHG+ P+ + L Q V +A GAWH A++ +G++ T+G G G
Sbjct: 343 THNAGILGHGTDVSHSIPKRV-TGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGV 401
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------------VYSFGC 337
LGHG+ E + PK +Q L+ KA+ VA G + T + E D ++++G
Sbjct: 402 LGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGD 461
Query: 338 GESASLGH-NAIADGQVCSLLFLSIFQYLQI 367
G+ LGH N Q + L+ + +LQ+
Sbjct: 462 GDQYRLGHANKETYLQPTCVAALADYNFLQV 492
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 139/319 (43%), Gaps = 16/319 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H VT +G ++++G +S G+LGHG ++ +PR + SL + A G T +
Sbjct: 271 GVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAV 330
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVE-SLKNIFVVQAAIGNFFTAVLSREG 168
S +G +Y +G + G GT + S P+ V L+ VV A G + TA+++ G
Sbjct: 331 SISGDLYTWGDGTHNAGILG-HGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNG 389
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL----------A 218
+++TF G LGH + P L L V++A G + A+ +
Sbjct: 390 KLFTFGDGTLGVLGHGDRESVAYPKE-LQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSS 448
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
S +++ G G +LGH ++ P + N + VA G + G
Sbjct: 449 NTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNF--LQVACGHSLTVALTASG 506
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V T G YG LG+ + + V L ++ G + V++ ++Y++G G
Sbjct: 507 HVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRG 566
Query: 339 ESASLGHNAIADGQVCSLL 357
+ LGH I D + L+
Sbjct: 567 ANGRLGHGDIEDQKTPILV 585
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 19/304 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++
Sbjct: 746 GGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLA 803
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+AFG + +G+ G ++ +P V+ L VV A G F+ L +G
Sbjct: 804 LKSDGTVWAFGYNGYGQLGDGTTSSQ--RTPVQVKDLTG--VVAIAAGKDFSLALKSDGT 859
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+++ LG+ T P + + V IAAG + +AL S V++
Sbjct: 860 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFAW 913
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ YG
Sbjct: 914 GYNGNGELGNSSTISQSTP---VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYG 968
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 969 QLGSGNNTSRSVPAAIPGLASMASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 1026
Query: 350 DGQV 353
D V
Sbjct: 1027 DTNV 1030
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 700 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 757
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 758 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 813
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG T + P + + VV IAAG + LAL S V+S G
Sbjct: 814 GYNGYGQLGDGTTSSQRTP---VQVKDLTGVVAIAAGKDFSLALK---SDGTVWSWGQNT 867
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG+G+ T P Q LL +AAG +H + +DG V WG+ G LG+
Sbjct: 868 YGELGNGTTTRSSVP---VQVALLT-DVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGN 923
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ +S P V + +K I A G Y T + DG V+S+G LG
Sbjct: 924 SSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLG 971
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G ++ AAG ++
Sbjct: 796 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLA 853
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 854 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 909
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + LG+ + + + P+ + I IAAG + LAL S V+S
Sbjct: 910 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALK---SDGTVWSW 962
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T P I + +AAG + G DG + +WG G
Sbjct: 963 GYNGYGQLGSGNNTSRSVPAAIPGLASM----ASIAAGENQSIAYGNDGILYSWGRNANG 1018
Query: 290 CLGHGNEECESVPKVVQALN 309
LG+G +VP V N
Sbjct: 1019 QLGNGTTVDTNVPHKVIGPN 1038
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
P+ V+ H + DG V WG+ +G LG G SVP V L +K I A G+
Sbjct: 691 PLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGE 748
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNA 347
T + DG ++++G LG ++
Sbjct: 749 NHTVALRSDGTLHTWGYNGYGQLGDDS 775
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 19/308 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+TS G V ++G N+ GQLG+GTT P + GIRI+ A GA ++
Sbjct: 94 AGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLA 153
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G + A+G + G + G ++P V N V A G VL+ G
Sbjct: 154 LTSTGSLLAWGSNDTG--QLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGP 211
Query: 170 VYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 223
+WG + +LG T + P P+ N+P V IA G + LAL +
Sbjct: 212 AALLAWGANREGQLGDGTVVDRSRPVPV-----NLPTGLTVTAIAGGRDHSLALTSDDT- 265
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V + G G+LG G+ T P + + + +AAG H+ + DG W
Sbjct: 266 --VLAWGGNSHGQLGDGTTTGSLLP--VTVVLPVGAEATAIAAGRLHSLALTSDGTALAW 321
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 342
G +G LG+G+ S P V + I +A+ D ++ +G ++G
Sbjct: 322 GGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGH 381
Query: 343 LGHNAIAD 350
LG D
Sbjct: 382 LGDGTTTD 389
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 23/304 (7%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 114
S AV S ++ ++G N GQLG GTT + P +R G + AAG ++ ++ AG
Sbjct: 48 SAAVMSDAIL-AWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAG 106
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V A+G+++ G+ G T P V I +V A+G + L+ G + +
Sbjct: 107 TVLAWGRNTEGQLGNGT--TTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSL--LA 162
Query: 175 WGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-ACQPSGMAV 226
WG+ D + + P V P N V IAAG + L L A P+ +
Sbjct: 163 WGSNDTGQLGDGSVTSSSTPVAVRLPP------NTTVAAIAAGRDHNLVLTATGPAALLA 216
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G+ D P + L + +A G H+ + D V WG
Sbjct: 217 W--GANREGQLGDGTVVDRSRPVPVNLPTGLTV--TAIAGGRDHSLALTSDDTVLAWGGN 272
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
+G LG G +P V +A +A G + ++ DG ++G LG+
Sbjct: 273 SHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNG 332
Query: 347 AIAD 350
+ +D
Sbjct: 333 STSD 336
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA- 102
E + AG HS+A+TS G ++G N GQLG+G+T + P + G R+I A+
Sbjct: 298 EATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASR 357
Query: 103 GAGRTMLISDAGQVYAFGKDSFG 125
+ + I+ G A+G +S G
Sbjct: 358 DSDHNVAITTEGAALAWGLNSQG 380
>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
CCMP2712]
Length = 272
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 66 SFGSNSSGQLGHGTTEEEWRPRPIRSLQ---GIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
++G N GQLG E+ + +Q +R+ A G+ ++++SD G+V+ +G++
Sbjct: 4 AWGDNDFGQLG---VSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILSD-GKVFTWGQN 59
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G+ +G P K VQ A G F+ L+ G ++ F G L
Sbjct: 60 KHGQLGHGPSDYLGSLGPTAKTDGK---CVQVAAGYNFSMALTDRGEIFVFGEGRHGVLA 116
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
E + P ++ +L ++P + +C AC + GCG G+LGH SR
Sbjct: 117 QGDELSKSSPQ-VIDSL-SVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSR 174
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
DE PR +E L N+ ++ G+ H + D + T G G+ G LGHG+E P
Sbjct: 175 DDEHFPRKVEH--LANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYP 232
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
K V+ L VK V+ GDY T + +Y+FG G LG
Sbjct: 233 KKVETLQAVK--EVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 20/247 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+ + S G V+++G N GQLGHG ++ P G + +Q AAG +M +
Sbjct: 41 GSAHSV-ILSDGKVFTWGQNKHGQLGHGPSDYLGSLGPTAKTDG-KCVQVAAGYNFSMAL 98
Query: 111 SDAGQVYAFGKDSFGEAEYGV--QGTKLV-TSPQLVESLK--NIFVVQAAIGNFFTAVLS 165
+D G+++ FGE +GV QG +L +SPQ+++SL V + G A +
Sbjct: 99 TDRGEIFV-----FGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIV 153
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
R G+ T+ G+D +LGH + ++ P + L N+ V I+ G + L S +
Sbjct: 154 RYGQALTWGCGSDGQLGHSSRDDEHFPRKVE-HLANVSVRTISCGSKHTCFLT---SDNS 209
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
+Y+ G G GKLGHG +P+ +E Q + V+ G +H A + + T+G
Sbjct: 210 LYTCGNGKDGKLGHGDERSYLYPKKVETLQAVK----EVSCGDYHTACIDGKSIIYTFGS 265
Query: 286 GRYGCLG 292
G G LG
Sbjct: 266 GTRGQLG 272
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
++ A+G + FG+ GV + S V+ ++ V A G+ + +LS +G+V+T+
Sbjct: 1 KLVAWGDNDFGQ--LGVSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILS-DGKVFTWG 57
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTL-----ENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+LGH P LG+L + VQ+AAGY + +AL + ++
Sbjct: 58 QNKHGQLGH-------GPSDYLGSLGPTAKTDGKCVQVAAGYNFSMALTDRGE---IFVF 107
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G G L G + P++I+ + + G H A + + G+ TWG G G
Sbjct: 108 GEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDG 167
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
LGH + + E P+ V+ L +V ++ G T ++ D +Y+ G G+ LGH
Sbjct: 168 QLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGH 223
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A+ G H++ T KG VY+ G NS GQLG G TEE I +I Q AAG+
Sbjct: 96 AVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT 155
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ GQ++ +G +S E + G+ V+ P V+ K + + + G + +A ++
Sbjct: 156 SAAVTEDGQLFVWGDNS--EGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFITG 211
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +YTF + +LG E N P P+LG +E + V + +L +
Sbjct: 212 DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVL------TET 265
Query: 225 AVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LGHG+ + P+ ++ + + V G H AV+ ++G + T+
Sbjct: 266 GVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHN--VTCGESHTAVIAENGLMFTF 323
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 324 GDGRHGKLGLGEE 336
Score = 100 bits (250), Expect = 8e-19, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 32/306 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G +Y FGSN GQLG G+ +P +++L+ + A G T++
Sbjct: 47 GDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVY 106
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G VYA G +S E + G+ T+ T+ L+ N + Q A G++ +A ++ +G+
Sbjct: 107 TEKGNVYAAGGNS--EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQ 164
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++ + ++ ++G + P + +G PV I+ GY + + +Y+
Sbjct: 165 LFVWGDNSEGQIGLADKTCVSVPCQVDVGK----PVSSISCGYYHSAFITGDGE---LYT 217
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVV--------VAAGAWHAAVVGQDGR 279
G GKLG L EQ + + QPV+ VA G H V+ + G
Sbjct: 218 FGEPENGKLG----------LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG- 266
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V T+G G+YG LGHG + SVPK V+ L K +V G+ T V++E+G +++FG G
Sbjct: 267 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDG 326
Query: 339 ESASLG 344
LG
Sbjct: 327 RHGKLG 332
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAAGAGRTML 109
HS +T G +Y+FG +G+L G E+ + P+P+ + ++ + A G T++
Sbjct: 205 HSAFITGDGELYTFGEPENGKL--GLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVV 261
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G VY FG +G+ +G K + P+ V+ L++ + G TAV++ G
Sbjct: 262 LTETG-VYTFGLGQYGQLGHGTLLFK-TSVPKSVKHLRSHKIHNVTCGESHTAVIAENGL 319
Query: 170 VYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
++TF G +LG E N +P L + V+ +A G C++L A
Sbjct: 320 MFTFGDGRHGKLGLGEENFANQFDP-ALCSNFLSFTVLLVACGGCHMLVFA 369
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S AVT G ++ +G NS GQ+ G ++ P + G + + G
Sbjct: 148 QLAAGSYTSAAVTEDGQLFVWGDNSEGQI--GLADKTCVSVPCQVDVGKPVSSISCGYYH 205
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ I+ G++Y FG+ G+ + K PQ V + V + A G T VL+
Sbjct: 206 SAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVACGGEHTVVLTE 264
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VYTF G +LGH T + L + + + G + +A +G+ +
Sbjct: 265 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIA--ENGL-M 320
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
++ G G GKLG G ++ P L F L+ ++VA G H V
Sbjct: 321 FTFGDGRHGKLGLGEENFANQFDPALCSNF--LSFTVLLVACGGCHMLV 367
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F N +PV ++ G H AVV +G++ +G +G LG G++ P V+AL K
Sbjct: 33 KFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEK 92
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G T V +E G+VY+ G LG
Sbjct: 93 TKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLG 124
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ A G H+I V++ G V + G N GQLGHG T E P+ IRSL+ + +
Sbjct: 462 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 521
Query: 106 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
T+L + G +Y FG++ +G+ + + + PQ VE+L + +V A G + T
Sbjct: 522 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 579
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
V++ G+ + F + +LG T N + P + G LE ++I GY + +AL S
Sbjct: 580 VVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 636
Query: 223 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 270
G +++ G G+LG G S T + RLI++ + ++ V +A G +H
Sbjct: 637 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 694
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V +G + +G +G LG G+ P + + VA G Y T V++
Sbjct: 695 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V+S G NS G+LGHG T I++LQ IIQ AG T++++ G+V+ G +
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 434
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G+ G GT V+ + + + A G T ++S +GRV T + +LG
Sbjct: 435 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 492
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 241
H ++ P ++ +LEN V ++ Y Y LAC+ + +Y+ G G+LGH
Sbjct: 493 HGNTTSESVPK-IIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 550
Query: 242 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
D K P+ +E L + Q V VA G +H VV G+ +G YG LG E +
Sbjct: 551 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608
Query: 302 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
P V+ L + + + G Y T + +++FG + LG
Sbjct: 609 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 652
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 26/261 (9%)
Query: 107 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T+ D G+ V++ G++S+GE +G ++ S + +++L+ ++Q GN T VL
Sbjct: 364 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 421
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+ +G+V+T + ++ + G + L IP + + + C+ + +
Sbjct: 422 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 473
Query: 225 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
V + G G+LGHG+ T E P++I + N +V+ +H + +DG
Sbjct: 474 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 531
Query: 280 V---CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+ T+G YG LGH + +P+ V+AL+D + + VA G Y T VV+ G ++FG
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFG 591
Query: 337 CGESASLG----HNAIADGQV 353
+ LG N +A QV
Sbjct: 592 KNDYGQLGIDTMENQLAPVQV 612
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
A + N T EG +S G ++ LGH + + + L+ ++QI AG
Sbjct: 357 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGH-GDTASRKSFERIQALQQKEIIQIGAGN 415
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ + L V++ G G+ G G H I + + Q G H
Sbjct: 416 EHTVVLTADGK---VFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN-GCEHT 471
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG- 330
+V DGRV T G+ G LGHGN ESVPK++++L + V+ Y T + EDG
Sbjct: 472 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGN 531
Query: 331 --DVYSFGCGESASLGHNAIADGQV 353
++Y+FG + LGHN D ++
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRKI 556
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 96
EA ++ G H++ VT G ++FG N GQLG T E + P +R L+
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQE 620
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----------LVESL 146
++ G T+ + ++AFG++ +G+ G ++ Q L++ L
Sbjct: 621 CLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDEL 680
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ +V+ A G + T +S G +Y F N +LG V P P + +
Sbjct: 681 EGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP-IDDFVGKRIAL 739
Query: 207 IAAGYCYLLALA 218
+AAG+ + + L
Sbjct: 740 VAAGFYHTVVLT 751
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+IAV+ GV+Y FG N+ GQLG G T E P PI G RI AAG T++++
Sbjct: 694 HTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLTGG 753
Query: 114 GQVYAFGKDSFGEAE 128
+ +DS + E
Sbjct: 754 KEDDKNEQDSGNDKE 768
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 150/290 (51%), Gaps = 20/290 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+A+ G V+++G+N+ GQLG T + P + L G+ + AG ++
Sbjct: 105 AGHGHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGV--VSVVAGDTHSLA 162
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G+++ G+ G + + V P V L + V AA GN AV S +G
Sbjct: 163 VRSDGSVWAWGRNTSGQLGDGTRDDRAV--PVQVTGLSGVVSV-AAGGNHSLAVRS-DGS 218
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WGN+A P P P +E++ VV +AAG + LA+ + V++
Sbjct: 219 VW--AWGNNASGQLGGAPEAAYPVPW--RVEDVSGVVAVAAGQYHSLAVRYDGT---VWA 271
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G L G+LG G E + R + + Q+ L VV V+AG +H+ VV DG V WG
Sbjct: 272 WGDNLYGQLGDGKL--EGNSRWLPK-QVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNA 328
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
YG LG G+ + P VQ L A+ VA G + VV+ DG ++++G
Sbjct: 329 YGQLGGGSRAHAASP--VQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGS 376
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 20/293 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV G V++ G N GQLG GTT P ++ L G+ + AAG G ++ +
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAV--AAGHGHSLALRYD 116
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G +++G+ + + V P V L + V A G+ + + +G V+ +
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTV--PVQVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+LG T + P + G VV +AAG + LA+ S V++ G
Sbjct: 173 GRNTSGQLGDGTRDDRAVPVQVTGLSG---VVSVAAGGNHSLAVRSDGS---VWAWGNNA 226
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG P +E + V VAAG +H+ V DG V WG YG LG
Sbjct: 227 SGQLGGAPEAAYPVPWRVEDVSGV----VAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGD 282
Query: 294 GNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G E S +PK V L V A V+ G Y + VV DG V+++G LG
Sbjct: 283 GKLEGNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLG 333
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 25/300 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+AV G V+S+G N+ GQLGHG+T+ P +R L ++ AAG+ +
Sbjct: 457 AGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELS--EVVAVAAGSMHALA 514
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + +G+ G +G + SP V L + V A G+ + +G
Sbjct: 515 VRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMVSVAADFGHSLA--VRADG 572
Query: 169 RVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
V+ +WGN D+ LG T + P + N P V ++AGY Y +A+ S
Sbjct: 573 TVW--AWGNNTDSELGDGTTTRRLVPLRV-----NAPGTVALLSAGYNYSMAMRADGS-- 623
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+++ G G+LG GS T P ++ ++ +AAG H+ VG DG + WG
Sbjct: 624 -LWAWGTNFAGQLGDGSTTSRAVPVRVQG----PVRASTLAAGQSHSMAVGSDGFLWAWG 678
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ G LG G ++P V ++ V A+ V + V DG ++++G + LG
Sbjct: 679 FNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVTLN--LSLAVRSDGSLWAWGNNDVGQLG 736
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG HS+AV S G V+++G N+SGQLG GT ++ P + L G+ + AAG ++
Sbjct: 154 VAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVPVQVTGLSGV--VSVAAGGNHSL 211
Query: 109 LISDAGQVYAFGKDSFG------EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ G V+A+G ++ G EA Y V P VE + + V A G + +
Sbjct: 212 AVRSDGSVWAWGNNASGQLGGAPEAAYPV--------PWRVEDVSGVVAVAA--GQYHSL 261
Query: 163 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLA 216
+ +G V+ +WG++ +LG + P + +P VV ++AG+ + L
Sbjct: 262 AVRYDGTVW--AWGDNLYGQLGDGKLEGNSRWLP-----KQVPGLGGVVAVSAGFYHSLV 314
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVG 275
+ + V++ G G+LG GSR P Q+L + V VAAG H+ VV
Sbjct: 315 VRSDGT---VWAWGNNAYGQLGGGSRAHAASP-----VQVLGVSGAVAVAAGYRHSLVVN 366
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG + WG G G G P V L+ V + VA G + DG V+++
Sbjct: 367 SDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGV--VSVAAGGGHVLALLSDGTVWAW 424
Query: 336 GCGESASLG 344
G S LG
Sbjct: 425 GDNASGQLG 433
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 139/299 (46%), Gaps = 23/299 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ V S G ++++GSN GQ G GT P + L G ++ AAG G +
Sbjct: 357 AGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLA 414
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G ++ G+ G + ++ V P+ V L + V A G+ F+ + +G
Sbjct: 415 LLSDGTVWAWGDNASGQLGDGTRHSRWV--PRQVPELSGVVAVAA--GSSFSLAVRYDGS 470
Query: 170 VYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+ SWG++A +LGH T+ + V H E VV +AAG + LA+ + V
Sbjct: 471 VW--SWGDNAYGQLGHGSTDASSVPLH----VRELSEVVAVAAGSMHALAVRADGT---V 521
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
+ G G+LG G + R Q+ L +V VAA H+ V DG V WG
Sbjct: 522 WGWGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGN 579
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G VP V A V + + G + + DG ++++G + LG
Sbjct: 580 NTDSELGDGTTTRRLVPLRVNAPGTVALL--SAGYNYSMAMRADGSLWAWGTNFAGQLG 636
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+LA +P G V++ G G+LG G+ + P ++ + VAAG H+ +
Sbjct: 60 SLAVRPDGT-VWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGV----AAVAAGHGHSLALR 114
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG YG LG + +VP V L+ V + V GD + V DG V+++
Sbjct: 115 YDGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGV--VSVVAGDTHSLAVRSDGSVWAW 172
Query: 336 GCGESASLGHNAIAD 350
G S LG D
Sbjct: 173 GRNTSGQLGDGTRDD 187
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S AG HS+AV S G ++++G N GQLG GT P + + G+ +
Sbjct: 656 STLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVTLNL- 714
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 139
++ + G ++A+G + G + G Q + VT+
Sbjct: 715 -SLAVRSDGSLWAWGNNDVG--QLGTQPSTYVTT 745
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 30/305 (9%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ +T +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVY 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-----GNFFTAVLS 165
++ G+VYA G +S E + G+ T+ T+ QLV + F Q I G+ +A L+
Sbjct: 103 TEEGKVYAAGGNS--EGQLGLGDTEERTTFQLV----SFFTAQHKIKQLSAGSNTSAALT 156
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G ++ + ++ ++G E N P + +G P+ I+ GY + + +
Sbjct: 157 EDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGK----PISWISCGYYHSAFVTTEGE-- 210
Query: 225 AVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRV 280
+Y+ G GKLG + H P+L+ L + V VA G H + ++ V
Sbjct: 211 -LYTFGEPENGKLGLSPEQLKNHRIPQLV-----LGIPGKVNQVACGGGHTVALTEE-EV 263
Query: 281 CTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
T+G G++G LG G E S PKVV+ L + K ++A G+ T ++S+ G +Y+FG G
Sbjct: 264 YTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGR 323
Query: 340 SASLG 344
LG
Sbjct: 324 HGKLG 328
Score = 95.9 bits (237), Expect = 3e-17, Method: Composition-based stats.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A G H++ T +G VY+ G NS GQLG G TEE + + +I Q +AG+
Sbjct: 92 AACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G ++ +G +S E + G+ V P V K I + + G + +A ++
Sbjct: 152 SAALTEDGVLFMWGDNS--EGQIGLAEEANVCVPSEVTIGKPISWI--SCGYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
EG +YTF + +LG P ++ H + + IP V Q+A G + +AL +
Sbjct: 208 EGELYTFGEPENGKLG--LSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEE---- 261
Query: 225 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LG G+ E P++++ Q +Q +A G H A++ G + T+
Sbjct: 262 EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQ--YIACGENHTALISDTGHMYTF 319
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 320 GDGRHGKLGLGQE 332
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S A+T GV++ +G NS GQ+ G EE P G I + G
Sbjct: 144 QLSAGSNTSAALTEDGVLFMWGDNSEGQI--GLAEEANVCVPSEVTIGKPISWISCGYYH 201
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G++Y FG+ G+ + K PQLV + V Q A G T L+
Sbjct: 202 SAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGK-VNQVACGGGHTVALTE 260
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E VYTF G +LG T + ++ L+N + IA G + AL M
Sbjct: 261 E-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENH-TALISDTGHM-- 316
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G G GKLG G T++ P L F L +VA G H V
Sbjct: 317 YTFGDGRHGKLGLGQENFTNQFVPTLCSNF--LKFIVRLVACGGCHMLV 363
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 104
+Q G GH++A+T + V Y+FG GQLG GT E P+ ++ LQ +I A G
Sbjct: 246 NQVACGGGHTVALTEEEV-YTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGE 304
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T LISD G +Y FG G+ G + P L + V A G
Sbjct: 305 NHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACG 357
Score = 46.2 bits (108), Expect = 0.023, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F L N P ++ G H A++ + ++ +G +G LG G++ + P V+AL K
Sbjct: 29 KFWLKNDIPAYLSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEK 88
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
A G T V +E+G VY+ G LG
Sbjct: 89 VKIAACGRNHTLVYTEEGKVYAAGGNSEGQLG 120
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 300
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410
Query: 331 DVYSFG 336
S+G
Sbjct: 411 STISWG 416
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 287 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 395
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 396 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 453 MGYSHSLVIARD 464
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 101 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 158
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 159 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 214
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ I +A G + ++ G++YSFGC E LGHN+
Sbjct: 215 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNS 252
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 297
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 343
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 336 RLVKLFDFPG-----RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 384
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 385 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 444
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 445 GIFSEQVAMGYSHSLVIARD 464
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 31/316 (9%)
Query: 58 VTSKGVVYSFG---SNSSGQLGHGTTE----EEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G ++++ GH T+ + P+P+ S + + Q G+ L
Sbjct: 213 IESLGDVYVWGEVWTDAAPSDGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALT 272
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G++ G +G ++ P+LVES+ V + G F T +S G +
Sbjct: 273 TRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVESISVTIVDFISCGEFHTCAISASGDL 330
Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
F+WG+ + LG+ T + P + G LE + V+ +A G + + S +
Sbjct: 331 --FNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALIT---STGRL 385
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------- 276
Y+ G G G LGHG+R +P+ +E L + + VA G WH+A + +
Sbjct: 386 YTFGDGTFGALGHGNRESSAYPKEVEA--LNGFRTIKVACGVWHSAAIVEATVQTGMNMV 443
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
++ TWG G LG G++E +P VQAL + +A G T ++ G VY+ G
Sbjct: 444 SKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMG 503
Query: 337 CGESASLGHNAIADGQ 352
++ LG N +DG+
Sbjct: 504 SSDNGQLG-NPKSDGK 518
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 22/289 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+++ G ++++G S +G LG+ T W P+ + L+G++++ A G+ +
Sbjct: 317 GEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHS 376
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ G++Y FG +FG +G + + P+ VE+L ++ A G + +A +
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAY--PKEVEALNGFRTIKVACGVWHSAAIVEA 434
Query: 167 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
++YT+ G+ RLG + + P + LE+ Q+A G +AL
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEH-NFHQLACGQNMTVAL 493
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
A SG VY++G G+LG+ ++D K P L++ +L + ++ GA H AV+
Sbjct: 494 AT--SGH-VYTMGSSDNGQLGN-PKSDGKQPCLVKD-KLAHELVEEISCGAAHVAVLTSR 548
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 549 SEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCI 597
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 30/281 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS +TS G +Y+FG + G LGHG E P+ + +L G R I+ A G + I
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAI 431
Query: 111 SDA----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+A ++Y +G G + +L+ P V++L Q A G
Sbjct: 432 VEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLI--PTCVQALLEHNFHQLACGQNM 489
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G VYT ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 490 TVALATSGHVYTMGSSDNGQLG-NPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLT-- 546
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 275
S VY+ G G G+LGHG D+K P ++E + +++ + + H V G
Sbjct: 547 -SRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSG 605
Query: 276 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 307
D VCT + R+ C G C S KV++A
Sbjct: 606 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 646
>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
Length = 494
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 49 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I +L I+ A G
Sbjct: 126 VSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNH 185
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ +++ G VY+FG++ G+ G Q T V +P L+ S +V+ A G F+ V+
Sbjct: 186 TLALTEDGAVYSFGENKLGQLGQGNQ-TDAVLTPALI-SYNGQPLVKVACGAEFSMVVDC 243
Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 244 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVV 303
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V +A G + L L Q V++ G G G+LGH + DE PRL++ F
Sbjct: 304 VRDVACGANHTLVLDSQKR---VFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQ 360
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ AG + V + G + WG + + + E PK VQ L K +A G ++
Sbjct: 361 IYAGYQCSFAVSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 413
Query: 324 FVVSEDGDVYSFG 336
+++ D S+G
Sbjct: 414 IIIAADESTISWG 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLFITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 168
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E L V VA G H + +DG V ++G + G LG GN+ + + + N
Sbjct: 169 EA--LAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQ 226
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ VA G + VV G++YSFGC E LGHN+
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNS 262
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 321
VV A H+ + +G++ +WG G LGHG+ + PK+++AL + + VA G
Sbjct: 125 VVSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRN 184
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
T ++EDG VYSFG + LG D + L
Sbjct: 185 HTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALI 221
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G ++ + E P+
Sbjct: 346 RLVKLFDFPG-----RGASQIYAGYQCSFAVSEMGGLFFWGVTNTSR------ESTMYPK 394
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G +I A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 395 AVQDLCGWKIRSLACGKSSIIIAADESTISWGPSPTFGELGYGDTKPKSSTTAQEVKTLD 454
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
I++ Q +G + V++R+
Sbjct: 455 GIYIEQVVMGYSHSLVIARQ 474
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 29/184 (15%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ + S+ V+++G G+LGH ++E PR ++ G G
Sbjct: 310 GANHTLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVPRLVKLFD-------FPGRG----- 357
Query: 111 SDAGQVYAFGKDSFGEAE------YGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTA 162
A Q+YA + SF +E +GV T ++ P+ V+ L + A G
Sbjct: 358 --ASQIYAGYQCSFAVSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSII 415
Query: 163 VLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+ + E T SWG G T+P + TL+ I + Q+ GY + L +A
Sbjct: 416 IAADES---TISWGPSPTFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSLVIA 472
Query: 219 CQPS 222
Q +
Sbjct: 473 RQDT 476
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 25/302 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ +T KG V++ G NSSGQLG +E + P + + AAG +
Sbjct: 69 GGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPD-PCVHIAAGRYHSAA 127
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ +G+ Y +G++S G+ G + + +PQ +ESL + + A+G + L+ G+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQ 187
Query: 170 VYTFSWGND--ARLGH---------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
V SWG + LGH + N+ P ++ LE + V ++AG L+ A
Sbjct: 188 V--LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPR-IIHCLEKLQVRSVSAG---LVHSA 241
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
C +YS G G +LG G+ D P I ++ ++ G +H + QDG
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS----SISCGGYHTGAITQDG 297
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ TWG +GCLG G S P +++L + ++ G T +S DG ++S+G G
Sbjct: 298 DIYTWGSNEHGCLGSGF-RASSKPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355
Query: 339 ES 340
S
Sbjct: 356 GS 357
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
AG HS A+TS G Y +G NS GQLG G + P+ + SL G+R+ A G +
Sbjct: 120 AGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHS 179
Query: 108 MLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +++ GQV ++G + FG +G + T T P+++ L+ + V + G
Sbjct: 180 LGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT-PRIIHCLEKLQVRSVSAGLV 238
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A G +Y+F G+ +LG + +P P + ++P V + Y
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP----IPDLPRVSSISCGGYHTGAIT 294
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
Q +Y+ G G LG G R K RL + + ++ G H A + DG
Sbjct: 295 QDG--DIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSE---ISCGWKHTAAI-SDGY 348
Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ +WGW G YG LG G + P ++ + + A+HV+ G T +
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408
Query: 328 EDGDV 332
E+ ++
Sbjct: 409 EEIEI 413
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 19/288 (6%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG + ++ P R+L+ + G T++++D G+V+A G +S G+
Sbjct: 33 WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
++ ++ P V + V A G + +A ++ G Y + ++ +LG
Sbjct: 93 LGVPLK-SESSFDPVEVHGFPDP-CVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150
Query: 187 PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----- 240
V P + +L + + +A G + L LA +G V S G G LGHG
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ETGQ-VLSWGTNRFGCLGHGEMTGF 207
Query: 241 ----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
T+E PR+I + LQ V+AG H+A G + ++G G LG GN
Sbjct: 208 FDFFKDTNEYTPRIIHCLE--KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN 265
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P + L V +I + G Y T +++DGD+Y++G E LG
Sbjct: 266 NDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGSNEHGCLG 311
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 163 VLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
V + G+ + WGN RLG + EP L LE+ ++ G + L L +
Sbjct: 21 VSGKAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDK 79
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
V++ G G+LG +++ P + F P V +AAG +H+A + G
Sbjct: 80 GR---VFATGLNSSGQLGVPLKSESSFDPVEVHGFP----DPCVHIAAGRYHSAAITSSG 132
Query: 279 RVCTWGWGRYGCLGHGNEECESV---PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
WG G LG G + +SV P+ +++L ++ +A G + ++E G V S+
Sbjct: 133 ETYVWGRNSEGQLGLG-KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSW 191
Query: 336 GCGESASLGHNAI 348
G LGH +
Sbjct: 192 GTNRFGCLGHGEM 204
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 17/268 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS A+ S G + ++G GQLGHG + P+ ++++ + Q G T+ ++
Sbjct: 690 HSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKN 749
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+V+ +G +G + G+ T+ +P LV SL+ ++Q A G+ AVL+ V F
Sbjct: 750 GKVFTWGTSEYG--QLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVF 807
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCG 232
GN A +G N + ++ L+++ + +++ G+ AL C VY+ G
Sbjct: 808 --GNGAAMG---SANIISVPMMVPALKHLNIERLSCGHYSTAALTECGD----VYTWGS- 857
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G +LGHG+ E HP+L++ + +++ ++ G H A + G++ T G +G LG
Sbjct: 858 -GQELGHGTNQSELHPKLVDGLRSQSIRQ--ISCGGRHMAFLTDSGKIYTCGKDPFGQLG 914
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGD 320
H + ++ PK + +L I V+ G+
Sbjct: 915 HAQGD-QNKPKKIDSLLKTTFISVSCGE 941
Score = 98.6 bits (244), Expect = 4e-18, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q G H+I +T G V+++G++ GQLG G T++ P + SL+ IIQ A G+
Sbjct: 734 TQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGST 793
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++++A +V FG + + +++ P +V +LK++ + + + G++ TA L+
Sbjct: 794 HCAVLTNAREVLVFGNGA------AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALT 847
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G VYT WG+ LGH T N E HP L+ L + + QI+ G ++ L SG
Sbjct: 848 ECGDVYT--WGSGQELGHGT--NQSELHPKLVDGLRSQSIRQISCGGRHMAFLT--DSG- 900
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+Y+ G G+LGH ++ D+ P+ I+ LL + V+ G H A
Sbjct: 901 KIYTCGKDPFGQLGH-AQGDQNKPKKID--SLLKTTFISVSCGENHNA 945
Score = 90.9 bits (224), Expect = 8e-16, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 21/293 (7%)
Query: 59 TSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
T +G++ ++GS+S+ +LG G + + P + + I + G+ + +++ G
Sbjct: 586 TQRGIM-TWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGD 644
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
VY +G+ S G + P VESL + +V +IG + +A L G + T
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV--SIGYYHSAALKSNGELLT 702
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ G D +LGH N P ++ T+ + V Q+ G + + C V++ G
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPK-VVQTMTSHWVTQVQCGEKHTI---CLTKNGKVFTWGTS 758
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G P L+ + N+ + +A G+ H AV+ V +G G
Sbjct: 759 EYGQLGLGDTQKNCTPMLVTSLEKYNI--IQIACGSTHCAVLTNAREVLVFGNGA----A 812
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G+ SVP +V AL + ++ G Y+T ++E GDVY++G G+ LGH
Sbjct: 813 MGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGH 863
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 25/302 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
G +S A+T G VY +G S LG+G+ E++ P + SL ++ + G
Sbjct: 632 GSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLS--EVVLVSIGYY 689
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ + G++ +G G+ +G + T P++V+++ + +V Q G T L+
Sbjct: 690 HSAALKSNGELLTWGCGEDGQLGHGDVLNQ--TIPKVVQTMTSHWVTQVQCGEKHTICLT 747
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSG 223
+ G+V+T+ +LG + P L+ +LE ++QIA G +C +L A +
Sbjct: 748 KNGKVFTWGTSEYGQLGLGDTQKNCTPM-LVTSLEKYNIIQIACGSTHCAVLTNARE--- 803
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+ V+ G +G S P ++ + LN++ + + G + A + + G V TW
Sbjct: 804 VLVFGNGAAMG------SANIISVPMMVPALKHLNIERL--SCGHYSTAALTECGDVYTW 855
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G+ LGHG + E PK+V L ++ G +++ G +Y+ G L
Sbjct: 856 GSGQE--LGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQL 913
Query: 344 GH 345
GH
Sbjct: 914 GH 915
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S C LG K G + P + F + + ++ G++++A + ++G V WG G
Sbjct: 596 SSNCKLGFKT-EGREQSQATPERLPNFNIPEI--CSISCGSYYSAALTENGDVYMWGRGS 652
Query: 288 -----YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
LG+G+ E + +P V++L++V + V+ G Y + + +G++ ++GCGE
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLSEV--VLVSIGYYHSAALKSNGELLTWGCGEDGQ 710
Query: 343 LGHNAI 348
LGH +
Sbjct: 711 LGHGDV 716
>gi|388497640|gb|AFK36886.1| unknown [Lotus japonicus]
Length = 69
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF-TAVLSR 166
MLISD+GQVYAFGKDSFG+AEYGVQG+K V SPQLVESLKNIFVVQAAIGNFF + + R
Sbjct: 1 MLISDSGQVYAFGKDSFGDAEYGVQGSKTVISPQLVESLKNIFVVQAAIGNFFHSCTVKR 60
Query: 167 EGRVYTF 173
+Y F
Sbjct: 61 RQGLYIF 67
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G P+ + L GI + Q +AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEA 201
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ FG + G+ T+ SP L+E+L N V A G TA+L+
Sbjct: 202 HSMALSMSGNIYSWGKNEFG--QLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLG--K 316
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIP 339
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + EY K + +++
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSDGKPF----------EYDNYSMKHLRFESILQE 137
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTAPQ-IVEHLAGI 191
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG +YS G G+LG + P LIE L N +
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G H A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H + ++S G + + + S L + LQ +IIQ G ++ +
Sbjct: 105 GADHMLILSSDGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
S G+++A+G++ G+ G + T+PQ+VE L I + Q + G + LS G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNI 212
Query: 171 YTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
Y SWG + +LG HTE D L+ L+N V +A G + AL Q G+ ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSHT-ALLTQ-DGL-LF 265
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 286
+ G G G+LGH S +E P L+ + L + +A G WH A V G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVAE--LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 287 RYGCLGHG--NEECESVPKVVQALNDVK 312
+ G LG+G ++ +P V + D+K
Sbjct: 324 KEGQLGNGGTRDQLIPLPMKVSSNEDLK 351
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 89 IRSLQGIRIIQAAAGAGRTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+RS++ R Q +GR + G QV+ + G+ + +P+ ++
Sbjct: 47 LRSVEATR--QICCSSGRLAFLERGGAGVQVHQL-----------LPGSDGLRTPKCIKL 93
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
KN+ + +G +LS +G+ + + + L + L+ ++
Sbjct: 94 GKNMKIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRFES------------ILQEKKII 141
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 264
QI G + LAL+ G +++ G L G+LG G + P+++E L + +
Sbjct: 142 QITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEH--LAGIPLAQI 196
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+AG H+ + G + +WG +G LG + E + P +++AL++ K +A G T
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTA 256
Query: 325 VVSEDGDVYSFGCGESASLGHNAIAD 350
++++DG +++FG G+ LGHN+ +
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQN 282
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G +YS+G N GQLG TE + P I +L ++ A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T L++ G ++ FG G + G T+ P LV L V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G + +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H IA++ G VY +G++ GQ G G E + P + + I+ + G + +S
Sbjct: 151 HGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKD 210
Query: 114 GQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVY 171
G+V+ +G +G + + G GT+ P+ + ++ + + G FT +L+ EGR++
Sbjct: 211 GRVWTWG---YGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLF 267
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
TF G +LGH +EP + L+N V ++AAG ++LAL G A +S G
Sbjct: 268 TFGNGEAGQLGHGERGLCLEPSVV--PLDN--VKEVAAGGAHMLALT--KDGQA-WSWGW 320
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LGHG+ D P I L P V V+AG H+ + + G+V WG+
Sbjct: 321 GEDGRLGHGATEDFLKPEPIP-----TLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNA 375
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 326
G LG GNE P +++AL D + + G D++ F+
Sbjct: 376 SGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 14/301 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAG 105
A AG + +T++ +Y +GS+ L ++ + P Q + I++ G
Sbjct: 91 DAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQ 150
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G+VY +G FG+ G + + + P +E ++ +V + G +A +S
Sbjct: 151 HGIALSKNGEVYIWGNSEFGQTGLGNKEAQHL--PIRMEFFRDKSIVDVSCGLDHSAAVS 208
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGM 224
++GRV+T+ +G D +LGH+ ++++P L E I V + LL +
Sbjct: 209 KDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL----NETEG 264
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+++ G G G+LGHG R P ++ L N++ V AAG H + +DG+ +WG
Sbjct: 265 RLFTFGNGEAGQLGHGERGLCLEPSVVP---LDNVKEV--AAGGAHMLALTKDGQAWSWG 319
Query: 285 WGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
WG G LGHG E P+ + L V + V+ G + ++E G VY +G S L
Sbjct: 320 WGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRL 379
Query: 344 G 344
G
Sbjct: 380 G 380
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 14/290 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
VY+ G+ + QLG G E+ P P++ L G I AAAG + L++ ++Y +G
Sbjct: 55 VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
A ++ K + P L E +++ +V+ G LS+ G VY WGN + G
Sbjct: 115 GV-YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYI--WGN-SEFG 170
Query: 183 HHTEPNDVEPH-PL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
N H P+ + + +V ++ G + A++ V++ G G+ G+LGH
Sbjct: 171 QTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGR---VWTWGYGIDGQLGHN 227
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
DE P+ + + + V + + +GR+ T+G G G LGHG
Sbjct: 228 GTEDELKPKELTVIRGEGISRVTCGT-DFTGLLNETEGRLFTFGNGEAGQLGHGERGLCL 286
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
P VV L++VK VA G +++DG +S+G GE LGH A D
Sbjct: 287 EPSVV-PLDNVK--EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATED 333
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
+ AG H +A+T G +S+G G+LGHG TE+ +P PI +L + ++ +AG G
Sbjct: 298 EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGG 357
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++ ++++GQVY +G ++ G G + + V +P L+++L + V++A G
Sbjct: 358 HSLALTESGQVYGWGFNASGRLGLGNESS--VMTPTLIKALADKRVLRAICG 407
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+A+T G VY +G N+SG+LG G P I++L R+++A G ++
Sbjct: 354 AGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLF 413
Query: 110 ISDA 113
I+ A
Sbjct: 414 ITQA 417
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G++I AAG T+++SD GQV+ +G G+ G + ++V+SP ++ + + +VQ
Sbjct: 10 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 68
Query: 154 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
A G +AV++ G V F WG + G + +++ P
Sbjct: 69 GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSP-T 127
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ +L I + +AAG L C + VY+ G G+LG GS E PRL++
Sbjct: 128 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 184
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L N+ ++ GA H A+V +G+V +WGW +YG LG G+ ++P V A+ A
Sbjct: 185 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 243
Query: 315 HVATGDYTTFVVSE 328
+VA G + T +++E
Sbjct: 244 NVACGWWHTLLLAE 257
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 47 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+AIA G HS +T G V +FG GQ G G+T++E P + SL GI+I AAG
Sbjct: 86 KAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLW 145
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAV 163
T+ S G VYAFG + FG + G + T P+L++ SL+N+ V + G TA+
Sbjct: 146 HTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTAL 203
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++ G+V+++ W +LG + P + +E +A G+ + L LA P+
Sbjct: 204 VTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGCIAKNVACGWWHTLLLAESPT 260
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 22/235 (9%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P LV + + A G T VLS G+V+ + +G + +LG + V ++ +
Sbjct: 2 PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61
Query: 200 ENIPVVQIA----------AGYCYLLALACQ-------PSGMAVYSVGCGLGGKLGHGSR 242
++ +VQ + G C + A+AC AV + G GL G+ G GS
Sbjct: 62 DSSSLVQGSMSSEGHNFRIPGSC-IKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGST 120
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
DE P + LL +Q VAAG WH DG V +G ++G LG G+++ E++P
Sbjct: 121 DDELSPTCVS--SLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLP 178
Query: 303 KVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+++ +L +V ++ G T +V+++G V+S+G + LG + D + S
Sbjct: 179 RLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 233
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS------------LQG--- 94
AG H++ ++ G V+ +G GQLG G+ R R + S +QG
Sbjct: 18 AGGRHTLVLSDIGQVWGWGYGGEGQLGLGS-----RVRMVSSPHIIPCIDSSSLVQGSMS 72
Query: 95 -----IRI----IQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
RI I+A A GR + +I+DAG V AFG +G+ G +L SP V
Sbjct: 73 SEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDEL--SPTCVS 130
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
SL I + A G + T S +G VY F +LG ++ + P L +LEN+
Sbjct: 131 SLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVN 190
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + A V+S G G+LG G D P + +
Sbjct: 191 VKTISCGARH---TALVTDNGKVFSWGWNKYGQLGLGDVIDRNIP---SEVAIEGCIAKN 244
Query: 264 VAAGAWHAAVVGQ 276
VA G WH ++ +
Sbjct: 245 VACGWWHTLLLAE 257
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 25/319 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+A +G HS+ + S VYS G NS GQLG + + RP PI++L + I + G
Sbjct: 25 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEH 84
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+ +G S E + G+ +K ++ P + SL I ++Q + G++ + LS
Sbjct: 85 SVAVCHQGRVFTWGAGS--EGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 142
Query: 166 REGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+G+V FSWG++ + L P V+ +LE IP+ Q+AAG + AL
Sbjct: 143 EDGQV--FSWGSNRQGQLGLGNNLCSQASPQKVK------SLEGIPLAQVAAGGTHSFAL 194
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ + + G G+ ++ P I + LN+ V ++ G H +V+ +D
Sbjct: 195 SLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLTED 252
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 336
G+V T+G L H P++++ + + G Y T V G V S G
Sbjct: 253 GQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLG 311
Query: 337 CGESASLGHNAIADGQVCS 355
G S + NA CS
Sbjct: 312 RGPSCT--SNATHQEAACS 328
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 13/267 (4%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+PR + + G+++++AA+G ++L+ +VY+ G +S G + G + + P+ ++
Sbjct: 11 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRG--QLGQKSPQSTKRPEPIQ 68
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+L + + + G + + +GRV+T+ G++ +LG E ++ P + +L I
Sbjct: 69 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEISFMPTKINSLAGIK 127
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV 262
++Q++ G+ + LAL+ V+S G G+LG G+ + P+ ++ + + L
Sbjct: 128 IIQVSCGHYHSLALS---EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL--A 182
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATG 319
VAAG H+ + G WG R G L GN E + P + AL + ++++ G
Sbjct: 183 QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCG 242
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHN 346
T V++EDG V++FG S L H+
Sbjct: 243 YEHTSVLTEDGQVFTFGGSSSEQLQHS 269
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L+ + ++ +
Sbjct: 182 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISC 241
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T ++++ GQV+ FG S + ++ + + PQL+E + V Q G++ T
Sbjct: 242 GYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGIGG-HVSQIECGSYHTI 298
Query: 162 AVLSREGRVYTFSWG 176
A + G+V + G
Sbjct: 299 AYVYTTGQVVSLGRG 313
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
+ PR +E L L + A+G H+ ++ + RV + G G LG + + P+
Sbjct: 9 RRQPRRLEAGTGLKL--LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEP 66
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+QAL+ V V+ G + V G V+++G G LG
Sbjct: 67 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG 106
>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
Length = 520
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 219 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 276
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 337 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 393
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 394 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 446
Query: 331 DVYSFG 336
S+G
Sbjct: 447 STISWG 452
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 381 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 489 MGYSHSLVIARD 500
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 E---ALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHN--SDGK 291
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 379
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 372 RLVKLFDFPG-----RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 481 GIFSEQVAMGYSHSLVIARD 500
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 9/275 (3%)
Query: 66 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
S+G+ + LGHG+ E P+PI+SL+ +IQ A G + +GQ+Y++G G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60
Query: 126 EAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
+G + ++P+++ S KN VQ A G +A L+++G++Y++ G + LG+
Sbjct: 61 RLGHG--NIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+ P+ +L L ++ V +A G AC G+ ++S G G G LG G R D
Sbjct: 119 ERHDQWTPNLVL-RLRDLVVSYVACG--TNTTFACTGGGL-LFSWGSGKHGCLGLGDRED 174
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
P L+ + + + VA G H + +DG++ WG G GC G G+ P
Sbjct: 175 RLEPSLVRLREEDRI--IRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHK 232
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ D + ++ G + + ++ GD++ FG G
Sbjct: 233 LPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSGR 267
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
P+ ++SLK V+Q A+G + L G++Y++ G + RLGH + P L T
Sbjct: 21 PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80
Query: 200 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
+N VQIA G + L +YS G GL G+LG+G R D+ P L+ +L +L
Sbjct: 81 KNCTAVQIACGAAHSAYLT---QDGKLYSWGRGLNGELGNGERHDQWTPNLV--LRLRDL 135
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
VA G G + +WG G++GCLG G+ E P +V+ + + I VA G
Sbjct: 136 VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACG 195
Query: 320 DYTTFVVSEDGDVYSFGCGESA--SLGHNA 347
++ ++EDG ++ +G G LGH +
Sbjct: 196 EHHCLALTEDGKLWGWGRGTGGCHGLGHTS 225
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 174 SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG + LGH + N+ P P+ +L+ V+Q+A G + AL S +YS G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALC---SSGQIYSWGI 56
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
GL G+LGHG+ D P+++ + N V +A GA H+A + QDG++ +WG G G L
Sbjct: 57 GLNGRLGHGNIQDSSAPKMLASTKK-NCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGEL 115
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G+G + P +V L D+ +VA G TTF + G ++S+G G+ LG
Sbjct: 116 GNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLG 168
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
Q GP H A+ S G +YS+G +G+LGHG ++ P+ + S + +Q A GA
Sbjct: 34 QVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAA 93
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G++Y++G+ GE G + + +P LV L+++ V A G T +
Sbjct: 94 HSAYLTQDGKLYSWGRGLNGELGNGERHDQW--TPNLVLRLRDLVVSYVACGTNTTFACT 151
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G ++++ G LG + +EP L+ E ++++A G + LAL
Sbjct: 152 GGGLLFSWGSGKHGCLGLGDREDRLEP-SLVRLREEDRIIRVACGEHHCLALT---EDGK 207
Query: 226 VYSVGCGLGG--KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
++ G G GG LGH S H + + + + V ++ G WH+A + G + +
Sbjct: 208 LWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTI----VSMSCGRWHSAYLTIRGDIFCF 263
Query: 284 GWGR 287
G GR
Sbjct: 264 GSGR 267
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G + A T G+++S+GS G LG G E+ P +R + RII+ A G
Sbjct: 138 SYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEH 197
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++ G+++ +G+ + G +G+ T V SP + ++ +V + G + +A L+
Sbjct: 198 HCLALTEDGKLWGWGRGTGG--CHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLT 255
Query: 166 REGRVYTFSWGNDAR 180
G ++ F G R
Sbjct: 256 IRGDIFCFGSGRGFR 270
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
+WG G CLGHG+ E PK +++L + I VA G + G +YS+G G +
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60
Query: 342 SLGHNAIADGQVCSLL 357
LGH I D +L
Sbjct: 61 RLGHGNIQDSSAPKML 76
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 140/288 (48%), Gaps = 27/288 (9%)
Query: 86 PRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P I SL + + + A G L++ G+V+ +G++S G +G+ + P LVE
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVE 311
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 200
L V A G + T +S G ++T WG N LGH TE + P + G LE
Sbjct: 312 FLAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLE 369
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 259
+ V+ +A G + ALA S +++ G G G LGHG R +PR + Q+L+ L
Sbjct: 370 GLQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGL 423
Query: 260 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ + VA G WH A V+ Q G ++ TWG G LGHG++E +P V AL
Sbjct: 424 KTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALI 483
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
D +A G T ++ G V++ G LG N ++DG++ L+
Sbjct: 484 DYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGRLPCLV 530
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 69/336 (20%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H VT +G V+++G S G+LGHG + RP + L + A G T +
Sbjct: 272 GVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAV 331
Query: 111 SDAGQVYAFGKD------------------------------------------------ 122
S +G ++ +G
Sbjct: 332 STSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGK 391
Query: 123 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG----- 168
+FG+ +GV G + V P+ V+ L + ++ A G + TA V+S+ G
Sbjct: 392 LFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISS 451
Query: 169 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+++T+ G+ RLGH ++ + P + L + Q+A G+ +AL SG V+
Sbjct: 452 RKLFTWGDGDKHRLGHGSKETYLLP-TCVSALIDYNFHQLACGHTMTVALTT--SGH-VF 507
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
++G G+LG+ +D + P L+ Q +L+ ++ GA+H AV+ V TWG G
Sbjct: 508 TMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGA 565
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
G LGHG+ E P V+AL D ++ G T
Sbjct: 566 NGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFT 601
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS TS G +++FG + G LGHG E PR ++ L G++ I+ A G T I
Sbjct: 379 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 438
Query: 111 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
S +G +++ +G +G + T L+ P V +L + Q A G+
Sbjct: 439 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 496
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
T L+ G V+T +LG+ + P + L V +I+ G ++ L
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 553
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 275
S V++ G G G+LGHG D + P +E + N++ + A+ H V G
Sbjct: 554 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 612
Query: 276 QDGRVCT 282
D VC+
Sbjct: 613 ADQSVCS 619
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 29/362 (8%)
Query: 3 QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG 62
Q++ I KP+ ++ G W L L + + C R+ +I T
Sbjct: 53 QRQRICKPVIACTKRSTDMVDFGKWPL-FALLSSQDLSCIRQACVFGCSANEAIYTTQNN 111
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 121
V+ FG N S LG G + PR + L G +I+ + G+G +L ++ G+VY++G
Sbjct: 112 EVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGH 171
Query: 122 DSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ + + G +QGT T Q+ L + V+Q A G+ + L+ +G V+++ + N
Sbjct: 172 NGYSQLGNGNTIQGT---TPVQVCMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCG 228
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
++G T N P + +L++ VV I+AG +AL VY G G+LG
Sbjct: 229 QVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALT---DNGHVYGWGYNGTGQLGL 285
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G+ ++ P +L+ QP+ V G H + G + WG +G LG GN+
Sbjct: 286 GNTGNQLMP-----CRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNK 340
Query: 297 ECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGDVYSFG-----CGESASLGHNAI 348
++VP V + + +V A H + S+ G VY +G C S L H
Sbjct: 341 SNQTVPVKVGTNERMVEVTACHSTN---ISAAKSQSGQVYMWGLCRGQCLLSPHLTHFTC 397
Query: 349 AD 350
D
Sbjct: 398 TD 399
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAG 105
Q G HS+A+TS G V+S+G N+ GQ+G GTT + PR + SLQ ++ +AG
Sbjct: 202 QVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQT 261
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M ++D G VY +G + G+ G G +L+ P + + I ++Q +G T LS
Sbjct: 262 SSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFAQPICIIQVVLGYAHTLALS 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +Y + + +LG + N P +GT E + V++ A + ++ A SG
Sbjct: 320 DQGVLYAWGANSHGQLGIGNKSNQTVPVK-VGTNERM--VEVTACHSTNISAAKSQSGQ- 375
Query: 226 VYSVG-----CGLGGKLGHGSRTDE 245
VY G C L L H + TD+
Sbjct: 376 VYMWGLCRGQCLLSPHLTHFTCTDD 400
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L C G VYS G +LG+G+ P + +LL+ + + VA G+ H+ +
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTPVQV-CMELLSKKVIQVACGSHHSMALTS 215
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V +WG+ G +G G +SVP KV +L + ++ G ++ ++++G VY +
Sbjct: 216 DGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGW 275
Query: 336 GCGESASLGHNAIADGQV-CSLLFLSIFQYLQIWL 369
G + LG + + C L+F +Q+ L
Sbjct: 276 GYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVL 310
>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
Length = 427
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTET 125
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKTVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 331 DVYSFG 336
S+G
Sbjct: 354 STISWG 359
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIR 338
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ V VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHETIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 198
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGS 127
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 286
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKTVQDLCGWRIRSLAC 342
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L +F Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402
Query: 163 VLSRE 167
V++R+
Sbjct: 403 VIARD 407
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
Length = 1160
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 150/325 (46%), Gaps = 28/325 (8%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAAGAGRTM 108
G ++AV S G Y++G N+ GQLG GT + +P +P + +Q +AG +++
Sbjct: 677 GFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSL 736
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAAIGNFFTAVLS 165
+ G VYA+G + G+ G G +++ + + VQ + G + + L
Sbjct: 737 AVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQIAAGYCYLLALA 218
G ++ + + LG+ N P TL P +Q++ G+ + A+
Sbjct: 797 ARGNIWAWGFNQFGELGNGNNINSAIP-----TLAQYPRDAGTVTAIQVSGGFHHTAAID 851
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQD 277
+ +S G G+LG+G+ D P ++ + ++ + V+AGA H+ ++
Sbjct: 852 TK---GNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTK 908
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G WGW + G LG+G+ ++ P K + V AI V+ G Y + + ++G+
Sbjct: 909 GNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNA 968
Query: 333 YSFGCGESASLGHNAIADGQVCSLL 357
+++G +S LG + ++ +L+
Sbjct: 969 WAWGGNDSGELGIGTTSKSEIPALV 993
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 159/336 (47%), Gaps = 23/336 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ------GIRIIQA 100
Q AG S+AV S G VY++G+N SGQLG+G++ + P+R + G+ +Q
Sbjct: 727 QVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSS-GGYSTVPLRVIDPNDPRSGLTAVQV 785
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNF 159
+AG ++ + G ++A+G + FGE G + + T Q + +Q + G
Sbjct: 786 SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFH 845
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAGYCYLLAL 217
TA + +G +++ W +LG+ + P P+ + + +Q++AG + L +
Sbjct: 846 HTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLII 905
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPVVVAAGAWHAA 272
+ ++ G G+LG+GS + + +P + E + + V+AG +H+
Sbjct: 906 DTK---GNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTA--IQVSAGGYHSL 960
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVVSED 329
+ ++G WG G LG G +P +VQ + V + V+ G Y + + ++
Sbjct: 961 AIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKE 1020
Query: 330 GDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYL 365
G +++G + LG+ I++ + + + ++ Q +
Sbjct: 1021 GKTWAWGYNQFGQLGNGTISNSSIPTPVAFNLSQVI 1056
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 38/278 (13%)
Query: 93 QGIRIIQAAAGA-----GRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVES 145
QGI+ Q + G T+ + G YA+G++++G+ G Q K V + +
Sbjct: 660 QGIKFNQISGSRDFGDRGFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGA 719
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT------------EPNDVE 191
+ VQ + G+ + + +G Y ++WGN+ +LG+ + +PND
Sbjct: 720 SADFTYVQVSAGDEQSLAVGSDG--YVYAWGNNESGQLGNGSSGGYSTVPLRVIDPND-- 775
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
P G + VQ++AGY + LAL + +++ G G+LG+G+ + P L
Sbjct: 776 --PRSG----LTAVQVSAGYYHSLALDAR---GNIWAWGFNQFGELGNGNNINSAIPTLA 826
Query: 252 EQFQLL-NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ + + + V+ G H A + G +WGW +G LG+GN ++P VQ D
Sbjct: 827 QYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRD 886
Query: 311 ---VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
V+AI V+ G + ++ G+ +++G + LG+
Sbjct: 887 AGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGN 924
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 17/273 (6%)
Query: 43 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
RE + IA G H++ +T G VY+ G N+ GQLG + E+ + P+ + +
Sbjct: 112 REMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVRIPKEAMHIS 170
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +++ G++Y +G +S G+ G + K V P V+SL I + +AA+G+ +
Sbjct: 171 AGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHS 230
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-------PNDVEPHP-LLGTLENIPVVQIAAGYCY 213
++ G V+++ G RLGH E + E P L+ LE I V +AAG
Sbjct: 231 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAG--- 287
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+L AC AVY G ++ G P LI LL+ + VA G +H V
Sbjct: 288 MLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLIS--TLLDCEE--VACGGYHTCV 343
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+ + G + +WG GCLG+G+ +P+ V+
Sbjct: 344 LTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 376
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 22/294 (7%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG G + +W P P S + A G T+ ++++G+VYA G ++FG
Sbjct: 85 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG- 143
Query: 127 AEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ G+ K T P V K + A G + V++ +G +Y + ++ +LG
Sbjct: 144 -QLGISDEKRFSTEPVEVRIPKEAMHISA--GYNHSCVVTADGELYMWGVNSNGQLGLGK 200
Query: 186 EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
+ P + +L+ I + + A G + +A+A G V+S G G G+LGHG
Sbjct: 201 KSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVA---DGGEVFSWGDGRSGRLGHGHEST 257
Query: 241 -----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
T E PRLI++ + + ++ VAAG H+A V ++G V +G + G
Sbjct: 258 FLGFLKSTSEHTPRLIKELEGIKVKH--VAAGMLHSACVDENGAVYIFGERATNRVSFGE 315
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+ P ++ L D + VA G Y T V+++ GD+YS+G E+ LG+ + +
Sbjct: 316 ANKATTPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 367
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 17/297 (5%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 114
+ T V+ G+N G LG G + PR + SL G +I + G+G +L + G
Sbjct: 35 LYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 94
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+ +
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWG 153
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
+ N ++G + N P + +L+N VV IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQ--MCSMAVVDNG-EVYVWGYNGN 210
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LG GS ++ P + L ++ VA G H V+ +G+V WG YG LG G
Sbjct: 211 GQLGLGSSGNQSTPC---RLALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 267
Query: 295 NEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
N+ +S P V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 268 NKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 321
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 44/318 (13%)
Query: 4 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 41
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEP 65
Query: 42 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 91
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L +I+ A G+ +++++ G+V+A+G ++ G+ G + + ++ SL+N V
Sbjct: 125 LSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTSSLQNKVV 183
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V A G + + G VY + + + +LG + N P L L+ + V ++A GY
Sbjct: 184 VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRL--ALQGVRVQRVACGY 241
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAW 269
+ L L + VY+ G G+LG G+++++ +P ++E+ +++ + A
Sbjct: 242 AHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE---IAACHSAH 295
Query: 270 HAAVVGQDGRVCTWGWGR 287
+A Q G V WG R
Sbjct: 296 TSAAKTQGGHVYMWGQCR 313
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V+ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 43 VFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGH 101
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ I VA G Y + V++ DG+V+++G S +G
Sbjct: 102 NAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 345 HNAIAD 350
+ A+
Sbjct: 162 SGSTAN 167
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 152/322 (47%), Gaps = 33/322 (10%)
Query: 58 VTSKGVVYSFGS-----NSSGQLGH--GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ S G VY +G NSS LG + P+P+ S + + Q G L+
Sbjct: 259 IESLGDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALV 318
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G+V+ +G+DS G +G + K P LVESL V A G + + +S G +
Sbjct: 319 TRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVESLAITNVTFVACGEYHSCAVSSSGDL 376
Query: 171 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+T WG+ LGH T+ + P + G LE + VV +A G + ALA S +
Sbjct: 377 FT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACG-TWHSALAT--SNGKL 431
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 278
+++G G G LGHG R +P+ + QLL+ + + VA G WH+A V+G G
Sbjct: 432 FTIGDGRFGVLGHGDRDSVAYPK---EVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNT 488
Query: 279 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
R+ TWG G LGH N+E P V A+ + VA G T ++ G V++
Sbjct: 489 SAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTM 548
Query: 336 GCGESASLGHNAIADGQVCSLL 357
G LG N +DG+V L+
Sbjct: 549 GGTAYGQLG-NPNSDGKVPILV 569
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 21/286 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AV+S G ++++G ++ +G LGHGT W P+ + L+G++++ A G +
Sbjct: 363 GEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHS 422
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L + G+++ G FG +G + + V P+ V+ L ++ A G + +A +
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACGVWHSAAIIEV 480
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ R++T+ G+ RLGH + +EP + E Q+A GY +AL
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 539
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+++G G+LG+ + +D K P L+ + +L+ ++ GA H AV+
Sbjct: 540 TT--SGH-VFTMGGTAYGQLGNPN-SDGKVPILV-RGKLVGEFVEEISCGANHVAVLTSR 594
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ TWG G G LGHG+ + + P +V+AL D +++ G T
Sbjct: 595 SELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFT 640
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 27/324 (8%)
Query: 51 GPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
GPG H VT +G V+++G +S G+LGHG ++ RP + SL + A G +
Sbjct: 309 GPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSC 368
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNFFT 161
+S +G ++ +G + G G GT K V+ P L+ + VV A G + +
Sbjct: 369 AVSSSGDLFTWGDGTHGAGLLG-HGTDVSYWIPKRVSGP-----LEGLQVVSVACGTWHS 422
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--AC 219
A+ + G+++T G LGH + P + L +++A G + A+
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKE-VQLLSGHKAIKVACGVWHSAAIIEVM 481
Query: 220 QPSG-----MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
PSG +++ G G +LGH ++ P + N VA G +
Sbjct: 482 GPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQ--VACGYTMTVAL 539
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 333
G V T G YG LG+ N + + VP +V+ L ++ G V++ ++Y
Sbjct: 540 TTSGHVFTMGGTAYGQLGNPNSDGK-VPILVRGKLVGEFVEEISCGANHVAVLTSRSELY 598
Query: 334 SFGCGESASLGHNAIADGQVCSLL 357
++G G + LGH D + +++
Sbjct: 599 TWGRGANGRLGHGDTDDQKSPTMV 622
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 105
Q G ++A+T+ G V++ G + GQLG+ ++ + P +R L G + + + GA
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV-PILVRGKLVGEFVEEISCGAN 586
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ ++Y +G+ + G +G T SP +VE+LK+ + + G+ FT+ +
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHG--DTDDQKSPTMVEALKDRHIKNISCGSTFTSCI 643
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 20/292 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ A+ G V+S+G+N GQLG GT + P + L G+ I A G ++ +
Sbjct: 459 HTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLTGVTSI--ATGDYHSLALRSN 516
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G + +G+ G T T P V L NI + A G+ L +G V+ F
Sbjct: 517 GTVWGWGFNRYGQLGDGT--TVDRTQPVQVSGLTNIVSIAAGGGHSL--ALRSDGTVWAF 572
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ D +LG+ T + P +G L N VV +AAG Y LAL + V++ G
Sbjct: 573 GYNFDGQLGNGTRTWTILPVQAVG-LGN--VVSLAAGKMYSLALRADGT---VWAWGYNA 626
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G+ P Q+ L + + AG +H+ + DG V WG+ G LG
Sbjct: 627 SGQLGVGTTQGSAVP-----LQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNFEGQLG 681
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G + P +V ++++ AI GD + V DG ++++G LG
Sbjct: 682 NGTSDNRLTPGLVVSMSNATAIFA--GDLHSLAVRADGTLWAWGLNSHGQLG 731
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 161/322 (50%), Gaps = 20/322 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ A +G H++ + + G ++++G N+ GQLG+GT + P P+ +L GI + ++G
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV-NLTGITSV--SSGHR 458
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T + G V+++G + +G+ G + + ++P V L + + A G++ + L
Sbjct: 459 HTAALRLDGTVWSWGTNQYGQLGDGTRTDR--STPVQVPGLTGVTSI--ATGDYHSLALR 514
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V+ + + +LG T + +P + G L NI V IAAG + LAL +
Sbjct: 515 SNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSG-LTNI--VSIAAGGGHSLALRSDGT--- 568
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G G+LG+G+RT P ++ L N+ V +AAG ++ + DG V WG+
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTILP--VQAVGLGNV--VSLAAGKMYSLALRADGTVWAWGY 624
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G + +VP V L+ + +I T Y + + DG V+++G LG
Sbjct: 625 NASGQLGVGTTQGSAVPLQVSGLSAITSITAGT--YHSLALRSDGWVWAWGFNFEGQLG- 681
Query: 346 NAIADGQVCSLLFLSIFQYLQI 367
N +D ++ L +S+ I
Sbjct: 682 NGTSDNRLTPGLVVSMSNATAI 703
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 21/303 (6%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E +AG HS+AV + G V+++G N QLG G P G+ ++ AG
Sbjct: 300 ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLV---AG 356
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + G +++G + FG+ G + +P V L + A G T +
Sbjct: 357 FRHSVALGADGTAWSWGDNVFGQ--LGDTTFQPRMAPVQVTGLA-LGRADATSGQLHTVM 413
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L GR++ + N +LG+ T+ N P P+ + +++G+ + AL +
Sbjct: 414 LGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV----NLTGITSVSSGHRHTAALRLDGT- 468
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 282
V+S G G+LG G+RTD P Q+ L V +A G +H+ + +G V
Sbjct: 469 --VWSWGTNQYGQLGDGTRTDRSTP-----VQVPGLTGVTSIATGDYHSLALRSNGTVWG 521
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG+ RYG LG G + P V L ++ + +A G + + DG V++FG
Sbjct: 522 WGFNRYGQLGDGTTVDRTQPVQVSGLTNI--VSIAAGGGHSLALRSDGTVWAFGYNFDGQ 579
Query: 343 LGH 345
LG+
Sbjct: 580 LGN 582
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 25/294 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV S+G V+++G N GQLG GTT++ + P++ + AAG ++ + +
Sbjct: 61 HSLAVHSEGTVFAWGFNRLGQLGDGTTQD--KAAPVQVAGVASAVSVAAGDQYSLALDEN 118
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G ++ G+ G + P+ V L V A G L +G V+
Sbjct: 119 GDVWAWGDNASGQLGDGTLTPR--AQPRRVSGLTQ--GVSLASGFAHAVALRADGTVW-- 172
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WG++ +LG T P P+ G + +V + AG LAL + V++ G
Sbjct: 173 AWGDNRSNQLGSATLTRSPVPIPVPGLSD---IVAVVAGGSSSLALRADGT---VWAWGD 226
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G+ P ++ NL V ++AGA+HA + DG WG+ +G
Sbjct: 227 NRYGQLGDGTTVRRAAP-----VRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQ 281
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G ++P V+ L + + V G+Y + V DG V+++G LG
Sbjct: 282 LGDGTTVQRTLP-VLIGLTETRT--VVAGNYHSLAVRTDGAVWAWGDNRYRQLG 332
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A+ S G V+ +G N GQLG GTT + R +P++ I+ AAG G ++ +
Sbjct: 509 HSLALRSNGTVWGWGFNRYGQLGDGTTVD--RTQPVQVSGLTNIVSIAAGGGHSLALRSD 566
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG + G+ G + ++ P L N VV A G ++ L +G V+ +
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTIL--PVQAVGLGN--VVSLAAGKMYSLALRADGTVWAW 622
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG T P + G + I AG + LAL S V++ G
Sbjct: 623 GYNASGQLGVGTTQGSAVPLQVSGL---SAITSITAGTYHSLALR---SDGWVWAWGFNF 676
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG+G+ + P L+ + AG H+ V DG + WG +G LG
Sbjct: 677 EGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGT 732
Query: 294 GNEECESVPKVVQAL 308
G+ P VQ L
Sbjct: 733 GDTVEAWFPVQVQGL 747
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 22/303 (7%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG S+A+ + G V+++G N GQLG GTT R P+R + +AGA +
Sbjct: 206 VAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVR--RAAPVRVANLDAVTHISAGAYHAL 263
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G +A+G ++FG+ G T T P L+ + VV GN+ + + +G
Sbjct: 264 ALRADGTAWAWGYNAFGQLGDGT--TVQRTLPVLIGLTETRTVVA---GNYHSLAVRTDG 318
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WG++ T PL + V + AG+ + +AL + +S
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSAVPLHAGMTG--GVTLVAGFRHSVALGADGT---AWS 371
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G + G+LG PR+ Q L L +G H ++G +GR+ WG
Sbjct: 372 WGDNVFGQLGD----TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNN 427
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG+G ++ S+P V N V++G T + DG V+S+G + LG
Sbjct: 428 QGQLGNGTQQNSSLPLPV---NLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGT 484
Query: 348 IAD 350
D
Sbjct: 485 RTD 487
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 108
AG +S+A+ G V+++G N+SGQLG GT +PR + L QG+ + A+G +
Sbjct: 107 AGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSGLTQGVSL---ASGFAHAV 163
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G + + G P V L +I V A G + L +G
Sbjct: 164 ALRADGTVWAWGDNR--SNQLGSATLTRSPVPIPVPGLSDIVAVVA--GGSSSLALRADG 219
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WG D R G + V + V I+AG + ALA + G A ++
Sbjct: 220 TVW--AWG-DNRYGQLGDGTTVRRAAPVRVANLDAVTHISAGAYH--ALALRADGTA-WA 273
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ P LI L + VV AG +H+ V DG V WG RY
Sbjct: 274 WGYNAFGQLGDGTTVQRTLPVLIG---LTETRTVV--AGNYHSLAVRTDGAVWAWGDNRY 328
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
LG GN +VP V + G + + DG +S+G
Sbjct: 329 RQLGTGNLTSSAVPLHAGMTGGVTLV---AGFRHSVALGADGTAWSWG 373
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+A+ S G V++FG N GQLG+GT W P++++ ++ AAG ++
Sbjct: 555 AGGGHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTILPVQAVGLGNVVSLAAGKMYSLA 612
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G ++ G + GV T+ P V L I + A G + + L +G
Sbjct: 613 LRADGTVWAWGYNASG--QLGVGTTQGSAVPLQVSGLSAITSITA--GTYHSLALRSDGW 668
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + + +LG+ T N + P L+ ++ N I AG + LA+ + +++
Sbjct: 669 VWAWGFNFEGQLGNGTSDNRLTPG-LVVSMSN--ATAIFAGDLHSLAVRADGT---LWAW 722
Query: 230 GCGLGGKLGHGSRTDEKHPRLIE 252
G G+LG G + P ++
Sbjct: 723 GLNSHGQLGTGDTVEAWFPVQVQ 745
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V+ A+G + + + EG V+ + + +LG T + P + G V +AAG
Sbjct: 53 VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVAS---AVSVAAGD 109
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y LAL V++ G G+LG G+ T PR + Q V +A+G HA
Sbjct: 110 QYSLALDENGD---VWAWGDNASGQLGDGTLTPRAQPRRVSGLT----QGVSLASGFAHA 162
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ DG V WG R LG VP V L+D+ A V G ++ + DG
Sbjct: 163 VALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVA--VVAGGSSSLALRADGT 220
Query: 332 VYSFGCGESASLG 344
V+++G LG
Sbjct: 221 VWAWGDNRYGQLG 233
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ Q L PV +A G +H+ V +G V WG+ R G LG G + ++ P VQ
Sbjct: 42 VRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAP--VQVAGV 99
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
A+ VA GD + + E+GDV+++G S LG +
Sbjct: 100 ASAVSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTL 137
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 44 ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 92
N+ AI AG HS+AV + G ++++G NS GQLG G T E W P ++ L
Sbjct: 698 SNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747
>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 39/335 (11%)
Query: 46 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I +L ++ AA G
Sbjct: 125 SSVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACG 184
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ +++ G Y+FG++ G+ G Q T V SP L++ +V+ A G F+ V
Sbjct: 185 RNHTLALTEGGTAYSFGENKLGQLGQGNQ-TDAVLSPALIQ-YNGQPLVKVACGAEFSMV 242
Query: 164 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPLLGTL-------------E 200
+ +G +Y+F +LGH+++ D E T+
Sbjct: 243 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVTIFIEKSKDGQVTPVP 302
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 303 NVVVRDVACGGNHTLILDSQKR---VFSWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRG 359
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+ G + V + G + WG + + + E PK VQ L K +A G
Sbjct: 360 ASQIYTGYQCSFAVNEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKVRSLACGK 413
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ + ++D + G S + G D + S
Sbjct: 414 SSIVIAADDS---TISWGPSPTFGELGYGDNKAKS 445
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 32/279 (11%)
Query: 84 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
W P L +++ +G A ++LI+ G+++++G++ G+ +G TK + +P+
Sbjct: 111 WGPHRYGCLNDVQVSSVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRLEAPK 168
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
L+E+L + VV AA G T L+ G Y+F +LG + D P L
Sbjct: 169 LIEALADEVVVAAACGRNHTLALTEGGTAYSFGENKLGQLGQGNQ-TDAVLSPALIQYNG 227
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPR 249
P+V++A G + + + C+ + +YS GC G+LGH S E R
Sbjct: 228 QPLVKVACGAEFSMVVDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIAR 284
Query: 250 ----LIEQFQLLNLQPVV------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
IE+ + + PV VA G H ++ RV +WG+G YG LGH ++ E
Sbjct: 285 RVTIFIEKSKDGQVTPVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLGHTEQKDE 344
Query: 300 SVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
VP++V+ + A + TG +F V+E G ++ +G
Sbjct: 345 MVPRLVKLFDFPGRGASQIYTGYQCSFAVNEMGGLFFWG 383
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 44/309 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A G H++A+T G YSFG N GQLG G + + G +++ A GA +
Sbjct: 181 AACGRNHTLALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFS 240
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE----------------------- 144
M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 241 MVVDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEFDCETIARRVTIFIEKSKDGQVT 299
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP- 203
+ N+ V A G T +L + RV+++ +G RLG HTE D E P L L + P
Sbjct: 300 PVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLG-HTEQKD-EMVPRLVKLFDFPG 357
Query: 204 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
QI GY C AV +G + + SR +P+ ++ L +
Sbjct: 358 RGASQIYTGY------QCS---FAVNEMGGLFFWGVTNTSRESTMYPKAVQ--DLCGWKV 406
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVAT 318
+A G + V+ D +WG +G LG+G+ + +S + V++L+ V A V
Sbjct: 407 RSLACGK-SSIVIAADDSTISWGPSPTFGELGYGDNKAKSSTTAQEVKSLDGVYAEQVVM 465
Query: 319 GDYTTFVVS 327
G + V++
Sbjct: 466 GYAHSLVIA 474
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 113 PH-RYGCLNDVQVSSVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRLEAPKLI 170
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E L + V A G H + + G ++G + G LG GN+ + + N
Sbjct: 171 EA--LADEVVVAAACGRNHTLALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQYNGQ 228
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQVCSLLFLSIFQYLQI 367
+ VA G + VV G++YSFGC E LGHN+ IA Q +I + + I
Sbjct: 229 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVTI 288
Query: 368 WLNLSS 373
++ S
Sbjct: 289 FIEKSK 294
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ G S AV G ++ +G ++ + E P+
Sbjct: 348 RLVKLFDFPG-----RGASQIYTGYQCSFAVNEMGGLFFWGVTNT------SRESTMYPK 396
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G ++ A G ++ +D + +FGE YG K T+ Q V+SL
Sbjct: 397 AVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSPTFGELGYGDNKAKSSTTAQEVKSLD 456
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
++ Q +G + V++R+
Sbjct: 457 GVYAEQVVMGYAHSLVIARQ 476
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 24/321 (7%)
Query: 42 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQ 99
R + AIA G H++ +T G VY+ G N GQLG + + + P+ + +++Q
Sbjct: 63 RNKTLNAIACGGAHTLFLTEDGCVYATGLNDFGQLGV-SESKHYSVEPLCVFGEEKKVVQ 121
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+AG + I+ G++Y +GK++ G+ G + +V P VE LK I + AA+G+
Sbjct: 122 ISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSE 181
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDV-------EPHP-LLGTLENIPVVQIAAGY 211
+ +S G +++ G RLGH E + + E P L+ LE I V +AAG
Sbjct: 182 HSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAG- 240
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
LL AC V+ G KL +D P LI + VA G +H
Sbjct: 241 --LLNSACTDENGCVFVFGERGIEKLRLKEMSDATKPSLISELP----SSKEVACGGYHT 294
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDG 330
V+ G + TWG GCLG G+ + +P+ VQ V+ G T +SE G
Sbjct: 295 CVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISE-G 353
Query: 331 DVYSFGCGES----ASLGHNA 347
V+++G G S + +GH++
Sbjct: 354 RVFTWGWGGSNGTFSEVGHSS 374
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 131/303 (43%), Gaps = 29/303 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGA 104
Q AG HS A+T G +Y +G N+SGQLG G P P + L+GI I AA G+
Sbjct: 121 QISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGS 180
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLKNIFVVQAAIG 157
++ ISD G +++G G +G + + L +P+L++ L+ I V A G
Sbjct: 181 EHSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAG 240
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+A G V+ F +L E +D L+ L + V + +L
Sbjct: 241 LLNSACTDENGCVFVFGERGIEKL-RLKEMSDATKPSLISELPSSKEVACGGYHTCVLTN 299
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
+ + +Y+ G G LG GS +D H Q L V+ G H A + +
Sbjct: 300 SGE-----LYTWGSNENGCLGIGS-SDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI-SE 352
Query: 278 GRVCTWGWG------------RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
GRV TWGWG G LGHG++ P V DVKA+ V+ G T
Sbjct: 353 GRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGA 412
Query: 326 VSE 328
+ E
Sbjct: 413 ILE 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 19/288 (6%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG G + +W+P + + + A G T+ +++ G VYA G + FG
Sbjct: 37 WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFG- 95
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
+ GV +K + L + VVQ + G + ++ +G +Y + +LG
Sbjct: 96 -QLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGELYMWGKNTSGQLGLGKR 154
Query: 187 PNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-- 243
++ P P + L+ I + A G + +A++ G A +S G G+ G+LGHG +
Sbjct: 155 APNIVPLPTKVEYLKGINIKMAALGSEHSVAIS---DGGAAFSWGIGVSGRLGHGHESSV 211
Query: 244 -------DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
E PRLI+ + + ++ VAAG ++A ++G V +G L
Sbjct: 212 LGFFKSYSEYTPRLIKDLEGIKVK--YVAAGLLNSACTDENGCVFVFGERGIEKLRLKEM 269
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ P ++ L K VA G Y T V++ G++Y++G E+ LG
Sbjct: 270 SDATKPSLISELPSSK--EVACGGYHTCVLTNSGELYTWGSNENGCLG 315
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 82 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
+ + P+ ++S + + G +L++ GQ+Y++G++S G +GV V P+
Sbjct: 283 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 340
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 197
L++ V A G F T ++ G +Y +WG N LG + + +P +LG
Sbjct: 341 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 398
Query: 198 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
+E I Y+ A++C P S +++ G G G LGHG R PR
Sbjct: 399 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 448
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+E L + + A G WH+A V G++ TWG G G LGHG+ EC +P
Sbjct: 449 VEA--LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 506
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V L+ VA G T +S G VY+ G +
Sbjct: 507 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTAD 542
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 104
A G H+ AVT+ G +Y++G +++G LG G+ W+P R + ++GI + + G
Sbjct: 353 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 412
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++ G+++ FG +FG +G + + + P+ VE+L ++AA G + +A +
Sbjct: 413 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 470
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
+ G+++T+ G+D RLGH D+E + + L+ Q+A G
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 526
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL+ SG VY++G S + P IE L VA G H AV+
Sbjct: 527 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 576
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 577 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS+G +++FG + G LGHG PR + +L G R I+AA G + +
Sbjct: 411 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 470
Query: 111 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ +G+++ +G G +G +L+ P V L Q A G T
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 528
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS G+VY +G +D+ P + G L V ++A G+ ++ L
Sbjct: 529 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 577
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 276
S VY+ G G G+LGHG P L++ + ++ VV A H + G
Sbjct: 578 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 637
Query: 277 DGRVCT 282
D C+
Sbjct: 638 DSTKCS 643
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 19/228 (8%)
Query: 134 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 188
+ L+T L + LK+ + A + G + +++++G++Y SWG ++ RLGH
Sbjct: 278 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 333
Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
PHP L N V++A + + + G G LG GS P
Sbjct: 334 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 393
Query: 249 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
R++ Q + + ++ ++ G WH A V +G++ T+G G +G LGHG+ ++P+ V+A
Sbjct: 394 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 451
Query: 308 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAI 348
LN + I A G + + V + G ++++G G+ LGH I
Sbjct: 452 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI 499
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 47 QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q +A H IAV SK VY++G S+GQLGHG TE P +++L+G ++ + G+
Sbjct: 564 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 623
Query: 106 RTMLI 110
T I
Sbjct: 624 YTATI 628
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 40/310 (12%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G +Y FGSN GQLG G+ +P +++L+ + A G T++
Sbjct: 60 GDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVY 119
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G +YA G + GE + G+ T+ T+ L+ N + Q A G++ +A ++ +G+
Sbjct: 120 TENGNMYAAGGN--GEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQ 177
Query: 170 VYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++ + ++ ++G + + P V+ +G P+ I+ GY + +
Sbjct: 178 LFVWGDNSEGQIGLADKTYVSVPCQVD----VGK----PISSISCGYYHSAFITGDGE-- 227
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVV--------VAAGAWHAAVVG 275
+Y+ G GKLG L EQ + + QPV+ VA G H V+
Sbjct: 228 -LYTFGEPENGKLG----------LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLT 276
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ G V T+G G+YG LGHG + SVPK V+ L K ++ G+ T V++E+G +++
Sbjct: 277 ETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFT 335
Query: 335 FGCGESASLG 344
FG G LG
Sbjct: 336 FGDGRHGKLG 345
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A+ G H++ T G +Y+ G N GQLG G TEE I +I Q AAG+
Sbjct: 109 AVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT 168
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ GQ++ +G +S E + G+ V+ P V+ K I + + G + +A ++
Sbjct: 169 SAAVTEDGQLFVWGDNS--EGQIGLADKTYVSVPCQVDVGKPISSI--SCGYYHSAFITG 224
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +YTF + +LG E N P P+LG +E + V + +L +
Sbjct: 225 DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVL------TET 278
Query: 225 AVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LGHG+ + P+ ++ + ++ + G H AV+ ++G + T+
Sbjct: 279 GVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRN--ITCGESHTAVIAENGLMFTF 336
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 337 GDGRHGKLGLGEE 349
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAAGAGRTML 109
HS +T G +Y+FG +G+L G E+ + P+P+ + ++ + A G T++
Sbjct: 218 HSAFITGDGELYTFGEPENGKL--GLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVV 274
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G VY FG +G+ +G K + P+ V+ L+ + G TAV++ G
Sbjct: 275 LTETG-VYTFGLGQYGQLGHGTLLFK-TSVPKSVKHLRKCKIRNITCGESHTAVIAENGL 332
Query: 170 VYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
++TF G +LG E N +P L + V+ +A G C++L A
Sbjct: 333 MFTFGDGRHGKLGLGEENFANQFDP-ALCSNFLSFTVLLVACGGCHMLVFA 382
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S AVT G ++ +G NS GQ+ G ++ + P + G I + G
Sbjct: 161 QLAAGSYTSAAVTEDGQLFVWGDNSEGQI--GLADKTYVSVPCQVDVGKPISSISCGYYH 218
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ I+ G++Y FG+ G+ + K PQ V + V + A G T VL+
Sbjct: 219 SAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVACGGEHTVVLTE 277
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
G VYTF G +LGH T + L + I G + +A +G+ +
Sbjct: 278 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIA--ENGL-M 333
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
++ G G GKLG G ++ P L F L+ ++VA G H V
Sbjct: 334 FTFGDGRHGKLGLGEENFANQFDPALCSNF--LSFTVLLVACGGCHMLV 380
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F N +PV ++ G H AVV +G++ +G +G LG G++ P V+AL K
Sbjct: 46 KFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEK 105
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G T V +E+G++Y+ G LG
Sbjct: 106 TKLAVCGRNHTLVYTENGNMYAAGGNGEGQLG 137
>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
Length = 402
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 32/273 (11%)
Query: 84 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
W P L G+R+ +G A ++LI+ G+++++G++ G+ +G TK V +P+
Sbjct: 135 WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPR 192
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
LVE L + +V AA G T L+ G V+ F +LG + D P P
Sbjct: 193 LVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNG 251
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPR 249
P+ ++A G + + + C+ + +YS GC G+LGH S E PR
Sbjct: 252 QPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 308
Query: 250 LIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
+ F Q+L + VVV A GA H V+ RV +WG+G YG LGH ++ E
Sbjct: 309 RVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE 368
Query: 300 SVPKVVQALN--DVKAIHVATGDYTTFVVSEDG 330
VP++V+ + A + G +F VSE G
Sbjct: 369 MVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVG 401
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 83 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR + L I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 255 QL 256
Sbjct: 378 DF 379
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 204 ---VVQIAAGYCYLLALA 218
QI AGY A++
Sbjct: 381 GRGASQIYAGYTCSFAVS 398
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ I +A G + ++ G++YSFGC E LGHN+
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNS 288
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 379
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G++I AAG T+++SD GQV+ +G G+ G + ++V+SP ++ + + +VQ
Sbjct: 214 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 272
Query: 154 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 194
A G +AV++ G V F WG + G + +++ P
Sbjct: 273 GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPT- 331
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ +L I + +AAG L C + VY+ G G+LG GS E PRL++
Sbjct: 332 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 388
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
L N+ ++ GA H A+V +G+V +WGW +YG LG G+ ++P V A+ A
Sbjct: 389 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 447
Query: 315 HVATGDYTTFVVSE 328
+VA G + T +++E
Sbjct: 448 NVACGWWHTLLLAE 461
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+AIA G HS +T G V +FG GQ G G+T++E P + SL GI+I AAG
Sbjct: 290 KAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLW 349
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAV 163
T+ S G VYAFG + FG + G + T P+L++ SL+N+ V + G TA+
Sbjct: 350 HTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTAL 407
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
++ G+V+++ W +LG + P + +E +A G+ + L LA P+
Sbjct: 408 VTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGCIAKNVACGWWHTLLLAESPT 464
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 136/331 (41%), Gaps = 48/331 (14%)
Query: 51 GPGHSIAVTSKGVVYSFGSN--------SSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
G G ++A++ G + ++GS +SG+ HG T P P + I++AA+
Sbjct: 53 GCGFAMAISESGKLITWGSTDDLGQSYVTSGK--HGET-----PEPFSLPNEVSIVKAAS 105
Query: 103 GAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLV---TSPQLVESLKNIFVV 152
+ +D G+VY +G FGE GV K S L E + + V
Sbjct: 106 AWAHCVAATDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQV 165
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGY 211
+ G ++ R S A+ + + + P L TL + + +AAG
Sbjct: 166 SKSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGD-DILTAMPCLVTLNPGVKITSVAAGG 224
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI-----------------EQ 253
+ L L+ V+ G G G+LG GSR P +I
Sbjct: 225 RHTLVLS---DIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQGSMSSEGHN 281
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
F++ +A G H+AV+ G V +GWG YG G G+ + E P V +L ++
Sbjct: 282 FRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQI 341
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VA G + T S DGDVY+FG + LG
Sbjct: 342 EGVAAGLWHTVCTSADGDVYAFGGNQFGQLG 372
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS------------LQG--- 94
AG H++ ++ G V+ +G GQLG G+ R R + S +QG
Sbjct: 222 AGGRHTLVLSDIGQVWGWGYGGEGQLGLGS-----RVRMVSSPHIIPCIDSSSLVQGSMS 276
Query: 95 -----IRI----IQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
RI I+A A GR + +I+DAG V AFG +G+ G +L SP V
Sbjct: 277 SEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDEL--SPTCVS 334
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
SL I + A G + T S +G VY F +LG ++ + P L +LEN+
Sbjct: 335 SLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVN 394
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V I+ G + A V+S G G+LG G D P + +
Sbjct: 395 VKTISCGARH---TALVTDNGKVFSWGWNKYGQLGLGDVIDRNIP---SEVAIEGCIAKN 448
Query: 264 VAAGAWHAAVVGQ 276
VA G WH ++ +
Sbjct: 449 VACGWWHTLLLAE 461
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V
Sbjct: 362 TGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 417
Query: 164 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 216
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR---SIKKVSSSKGSDGH----T 470
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 335
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 336 GCGESASLGH 345
G G++ LGH
Sbjct: 587 GGGDNGKLGH 596
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 18/304 (5%)
Query: 38 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 270 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDV 332
G V
Sbjct: 632 TGQV 635
>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
Length = 458
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR + L I+ AA G T+L+ +
Sbjct: 97 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLPET 156
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 157 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 214
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 215 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 274
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 275 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 331
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 332 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 384
Query: 331 DVYSFG 336
S+G
Sbjct: 385 STISWG 390
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++ + G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 143 AACGRNHTLLLPETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 201
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 202 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 260
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 261 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 318
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 319 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 369
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 370 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 426
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 427 MGYSHSLVIARD 438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 75 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEXPRLL 132
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H ++ + G V +G + G LG GN+ ++VP Q + +
Sbjct: 133 EG---LSHEVIVSAACGRNHTLLLPETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 188
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 189 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 229
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE LL L + +V A G + L L P
Sbjct: 100 LITTEGKLWSWGRNEKGQLGH-GDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLL---PE 155
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 156 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 211
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 212 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 271
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 272 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 317
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 320 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 373
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 374 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 433
Query: 163 VLSRE 167
V++R+
Sbjct: 434 VIARD 438
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 17/273 (6%)
Query: 43 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
RE + IA G H++ +T G VY+ G N+ GQLG + E+ + P+ + +
Sbjct: 129 REMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVRIPKEAMHIS 187
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + +++ G++Y +G +S G+ G + K V P V+SL I + +AA+G+ +
Sbjct: 188 AGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHS 247
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-------PNDVEPHP-LLGTLENIPVVQIAAGYCY 213
++ G V+++ G RLGH E + E P L+ LE I V +AAG
Sbjct: 248 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAG--- 304
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
+L AC AVY G ++ G P LI LL+ + VA G +H V
Sbjct: 305 MLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLIS--TLLDCEE--VACGGYHTCV 360
Query: 274 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+ + G + +WG GCLG+G+ +P+ V+
Sbjct: 361 LTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 393
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 22/294 (7%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG G + +W P P S + A G T+ ++++G+VYA G ++FG
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG- 160
Query: 127 AEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ G+ K T P V K + A G + V++ +G +Y + ++ +LG
Sbjct: 161 -QLGISDEKRFSTEPVEVRIPKEAMHISA--GYNHSCVVTADGELYMWGVNSNGQLGLGK 217
Query: 186 EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
+ P + +L+ I + + A G + +A+A G V+S G G G+LGHG
Sbjct: 218 KSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVA---DGGEVFSWGDGRSGRLGHGHEST 274
Query: 241 -----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 295
T E PRLI++ + + ++ VAAG H+A V ++G V +G + G
Sbjct: 275 FLGFLKSTSEHTPRLIKELEGIKVKH--VAAGMLHSACVDENGAVYIFGERATNRVSFGE 332
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
+ P ++ L D + VA G Y T V+++ GD+YS+G E+ LG+ + +
Sbjct: 333 ANKATTPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 41/254 (16%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLQGIRI 97
+A G HSIAV G V+S+G SG+LGHG + E PR I+ L+GI++
Sbjct: 239 RAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKV 298
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKD-----SFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
AAG + + + G VY FG+ SFGEA T+P L+ +L +
Sbjct: 299 KHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANK-------ATTPSLISTL--LDCE 349
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ A G + T VL++ G +Y++ + LG+ + P + G PV +++ G+
Sbjct: 350 EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWK 409
Query: 213 YLLALACQPSGMAVYSVGCG------------LGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+ A+ SG A+++ G G GG+LGHGS D P I+ + N++
Sbjct: 410 HTAAI----SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGE--NVK 463
Query: 261 PVVVAAGAWHAAVV 274
V V+ G H +
Sbjct: 464 VVQVSCGFNHTGAI 477
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 23/321 (7%)
Query: 42 RRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQ 99
R+N ++I AG HS + G VY++G GQLGH TE E P + ++
Sbjct: 34 NRKNVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSA 93
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGN 158
A G T++++D G +Y +G++ G+ G K SP L++S N+ V+ A G
Sbjct: 94 VACGRNHTVVVTDNGLIYTWGENKAGQ--LGTGDLKSSNSPVLIDSALNLPSVLSIACGE 151
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
F T + EG ++++ +LGH P ++G + I ++ A G + L L
Sbjct: 152 FHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQHTLVLT 210
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+Y+ G G+LG +R+D+ P +++ + V+ G H+ + +
Sbjct: 211 ---DANKIYAWGSNAYGQLGL-NRSDKAVLQPDIVDHLRRSGACHVL--CGYSHSMALMK 264
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGD---- 331
+ ++ TWG G LG G+ VP++V AL V+ +A G D+ V+++ +
Sbjct: 265 NEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMP 324
Query: 332 ----VYSFGCGESASLGHNAI 348
VYS+G GE LGHN +
Sbjct: 325 PLEHVYSWGRGEEGQLGHNEL 345
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++A+ +G ++S+G N GQLGHG T+ + P + + I+AA G T+++
Sbjct: 150 GEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVL 209
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+DA ++YA+G +++G+ + K V P +V+ L+ G + L + ++
Sbjct: 210 TDANKIYAWGSNAYGQLGLN-RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQI 268
Query: 171 YTFSWG-NDA---RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQ----- 220
YT WG ND LGH+T P P L+ L ++ V QIA GY + +A
Sbjct: 269 YT--WGRNDCGQLGLGHYTH----SPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322
Query: 221 -PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
P VYS G G G+LGH PR++E
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 21/277 (7%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
R +S G H++ VT G++Y++G N +GQLG G + P I S L ++
Sbjct: 88 NRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSI 147
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G T+ I G ++++G++ G+ +G TK P V + ++AA G
Sbjct: 148 ACGEFHTVAICIEGTIWSWGRNQCGQLGHG--NTKTCYFPTQVVGMAKKICIRAACGGQH 205
Query: 161 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T VL+ ++Y +WG++A +LG + V ++ L + GY + +AL
Sbjct: 206 TLVLTDANKIY--AWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM 263
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD- 277
+Y+ G G+LG G T P L+ + + +Q +A G H D
Sbjct: 264 ---KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQ--IACGYDHCVAFVADE 318
Query: 278 --------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
V +WG G G LGH P++V+
Sbjct: 319 VEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 18/239 (7%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESL------KNIFVVQAAIGNFFTAVLSREGR 169
VY++GK+ +G+ G+ T V P + SL KN+ + A G +AV++ +G
Sbjct: 1 VYSWGKNKYGQ--LGLGHTNNVPLPTGILSLSDPLNRKNVRSIGA--GKSHSAVIAEDGD 56
Query: 170 VYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VYT+ G + +LGH ++EPH ++ +EN +A G + + + +G+ +Y+
Sbjct: 57 VYTWGRGWEGQLGHDVVTEIELEPH-IVPKMENRGSSAVACGRNHTVVVT--DNGL-IYT 112
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G P LI+ LNL V+ +A G +H + +G + +WG +
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDSA--LNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
G LGHGN + P V + I A G T V+++ +Y++G LG N
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLN 229
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 17/289 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSL------QGIRIIQAAAGAGRTMLISDAGQVY 117
VYS+G N GQLG G T P I SL + +R I AG + +I++ G VY
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSI--GAGKSHSAVIAEDGDVY 58
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G+ G+ + V T++ P +V ++N A G T V++ G +YT+
Sbjct: 59 TWGRGWEGQLGHDVV-TEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENK 117
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 236
+LG + P L+ + N+P V+ IA G + +A+ + + ++S G G+
Sbjct: 118 AGQLGTGDLKSSNSP-VLIDSALNLPSVLSIACGEFHTVAICIEGT---IWSWGRNQCGQ 173
Query: 237 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGN 295
LGHG+ P + + + A G H V+ ++ WG YG LG + +
Sbjct: 174 LGHGNTKTCYFPTQV--VGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRS 231
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ P +V L A HV G + + ++ +Y++G + LG
Sbjct: 232 DKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLG 280
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND------VKAIHVATGDYTTFVVSEDGDVY 333
V +WG +YG LG G+ +P + +L+D V++I G + V++EDGDVY
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSI--GAGKSHSAVIAEDGDVY 58
Query: 334 SFGCGESASLGHNAIAD 350
++G G LGH+ + +
Sbjct: 59 TWGRGWEGQLGHDVVTE 75
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 82 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
+ + P+ ++S + + G +L++ GQ+Y++G++S G +GV V P+
Sbjct: 286 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 343
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 197
L++ V A G F T ++ G +Y +WG N LG + + +P +LG
Sbjct: 344 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 401
Query: 198 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 250
+E I Y+ A++C P S +++ G G G LGHG R PR
Sbjct: 402 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 451
Query: 251 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+E L + + A G WH+A V G++ TWG G G LGHG+ EC +P
Sbjct: 452 VEA--LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V L+ VA G T +S G VY+ G +
Sbjct: 510 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTAD 545
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 104
A G H+ AVT+ G +Y++G +++G LG G+ W+P R + ++GI + + G
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++ G+++ FG +FG +G + + + P+ VE+L ++AA G + +A +
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 473
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 214
+ G+++T+ G+D RLGH D+E + + L+ Q+A G
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 529
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+AL+ SG VY++G S + P IE L VA G H AV+
Sbjct: 530 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 579
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 580 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ VTS+G +++FG + G LGHG PR + +L G R I+AA G + +
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 473
Query: 111 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+ +G+++ +G G +G +L+ P V L Q A G T
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 531
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS G+VY +G +D+ P + G L V ++A G+ ++ L
Sbjct: 532 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 580
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 276
S VY+ G G G+LGHG P L++ + ++ VV A H + G
Sbjct: 581 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 640
Query: 277 DGRVCT 282
D C+
Sbjct: 641 DSTKCS 646
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 19/228 (8%)
Query: 134 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 188
+ L+T L + LK+ + A + G + +++++G++Y SWG ++ RLGH
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 336
Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
PHP L N V++A + + + G G LG GS P
Sbjct: 337 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 396
Query: 249 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
R++ Q + + ++ ++ G WH A V +G++ T+G G +G LGHG+ ++P+ V+A
Sbjct: 397 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 454
Query: 308 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAI 348
LN + I A G + + V + G ++++G G+ LGH I
Sbjct: 455 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI 502
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 47 QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q +A H IAV SK VY++G S+GQLGHG TE P +++L+G ++ + G+
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 626
Query: 106 RTMLI 110
T I
Sbjct: 627 YTATI 631
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 31 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 90
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 91 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 148
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LAL PS
Sbjct: 149 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALV--PSSGL 205
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+Y+ GCG G+LG G + K P
Sbjct: 206 IYAFGCGAKGQLGTGHTCNVKCP 228
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 15 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 74
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 75 -RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 127
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 128 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVT 187
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T +V G +Y+FGCG LG
Sbjct: 188 QIACGRQHTLALVPSSGLIYAFGCGAKGQLG 218
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 12/238 (5%)
Query: 71 SSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
S GQLG TTE+ PR I+ L I+Q + G + ++ GQ + +GK+S G+
Sbjct: 2 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 61
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G + TSPQ V SL+ I + Q A G + LS G V+ + N +LG E D
Sbjct: 62 GKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KD 119
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
E + L VV I+ G + L SG V++ G G G+LGH S DE +PR
Sbjct: 120 RESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSVNDEVNPR 176
Query: 250 LIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
+ +L+ + +A G H A+V G + +G G G LG G N +C S K
Sbjct: 177 RV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 232
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G+D +LG T + V L+ L ++Q++ G + LALA ++ G G
Sbjct: 1 GSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHG 57
Query: 236 KLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
+LG G S+T + R +E L VAAG H+ + G V WG G L
Sbjct: 58 QLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQL 112
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G +E+ P V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 113 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVND 171
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 83 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 142
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 143 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 200
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 201 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 233
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 153/364 (42%), Gaps = 65/364 (17%)
Query: 34 LLAGEAC---CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
L+ G+ C CR E +A AG +++ G V+++G+NS GQLG GTT P+
Sbjct: 25 LVNGDGCSFVCRLETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVD 84
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
G+ + + AAG + + ++A+G++ G+ + GV T SP V +
Sbjct: 85 FSNGMVVKRVAAGGSHALAVLSDKTLWAWGRN--GDGQLGVGSTTSSFSPVKVPGRTGVE 142
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-----------------H 193
VV A F +A + +G+V T+ + +LG+ + + P H
Sbjct: 143 VVAMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYH 202
Query: 194 PL------------------------LGTLENIP--------VVQIAAGYCYLLALACQP 221
L T N P V ++AG + LAL
Sbjct: 203 MLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDG 262
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+ V++ G G+LG GS TD P Q+ L VV VAAG +HA + DG V
Sbjct: 263 T---VWAWGQNNQGQLGIGSFTDRPSP-----VQVPRLTGVVEVAAGQFHALALRLDGTV 314
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
WG+ G LG G S P V L V + VA GD + V DG VY++G +
Sbjct: 315 WAWGFNGSGQLGDGTTLSRSSPVQVPGLTGV--VSVAAGDGHSVAVLSDGRVYTWGRNSA 372
Query: 341 ASLG 344
LG
Sbjct: 373 GQLG 376
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
+S AV S G V ++G N+ GQLG+G+T ++ P + +L I+ + + G + +
Sbjct: 152 NSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV--SVGKYHMLALRSG 209
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + G+ G +PQ LK + V A G+ + L +G V+ +
Sbjct: 210 GTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSA--GDSHSLALRWDGTVWAW 267
Query: 174 SWGNDARLG---HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 230
N +LG P+ V+ L G VV++AAG + LAL + V++ G
Sbjct: 268 GQNNQGQLGIGSFTDRPSPVQVPRLTG------VVEVAAGQFHALALRLDGT---VWAWG 318
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 289
G+LG G+ P Q+ L VV VAAG H+ V DGRV TWG G
Sbjct: 319 FNGSGQLGDGTTLSRSSP-----VQVPGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAG 373
Query: 290 CLGHGNEECESVPKVVQAL 308
LG G+++ P QAL
Sbjct: 374 QLGDGSQDALPHPTPGQAL 392
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 146/335 (43%), Gaps = 32/335 (9%)
Query: 34 LLAGEAC---CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
L+ G+ C CR E + +AG ++ + G ++++G N SGQLG +T P +
Sbjct: 448 LVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVS 507
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+ + AAG ++ + G+++++G +S ++ GV L +
Sbjct: 508 TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSL--SQLGVSRDTLGSRASPALVSGVSG 565
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP-------NDVEPHPLLGTLENIP 203
VV A G + V+ G+V + + ++G P + EP L
Sbjct: 566 VVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLF------S 619
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
++ +AAG + LAL S V++ G G+LG GS D P + + + V
Sbjct: 620 ILGVAAGQNHSLALR---SDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRV----VS 672
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V AG +H+ + DG V WG G LG G + +P V L+ V + VA G +
Sbjct: 673 VVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLSGV--VAVAAGGRHS 730
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
+ DG V+++G + +G DG S+++
Sbjct: 731 LALRADGTVWAWGYNSNGQIG-----DGSDASIIY 760
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 17/301 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G ++S+GSNS QLG R P ++ AAG +++
Sbjct: 519 AGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLV 578
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G+V A+G + +G+ G E ++ A G + L +G
Sbjct: 579 VLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + N +LG + + P + VV + AG + LAL S V++
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRP---VQVARLNRVVSVVAGLYHSLALR---SDGTVWAW 692
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ + P Q+ L VV VAAG H+ + DG V WG+
Sbjct: 693 GDNGSGQLGDGTYFGQMLP-----VQVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSN 747
Query: 289 GCLGHGNEEC----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G G++ S KV+ + DV + VA GD + V G V ++G +S LG
Sbjct: 748 GQIGDGSDASIIYRPSPVKVLFSSQDV-VMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLG 806
Query: 345 H 345
+
Sbjct: 807 Y 807
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 113/257 (43%), Gaps = 16/257 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
HS+ V S G V ++G N GQ+G G + + P I+ AAG ++ +
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALR 634
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G V+A+G+++ G+ G LV + V+ + VV G + + L +G V+
Sbjct: 635 SDGTVWAWGRNNSGQLGDG----SLVDRTRPVQVARLNRVVSVVAGLYHSLALRSDGTVW 690
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ +LG T + P + G VV +AAG + LAL + V++ G
Sbjct: 691 AWGDNGSGQLGDGTYFGQMLPVQVPGLSG---VVAVAAGGRHSLALRADGT---VWAWGY 744
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYG 289
G++G GS + R L + Q VV VAAG H+ V GRV TWG G
Sbjct: 745 NSNGQIGDGSDASIIY-RPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSG 803
Query: 290 CLGHG-NEECESVPKVV 305
LG+ N S P V
Sbjct: 804 QLGYATNNTDRSTPGEV 820
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 130/319 (40%), Gaps = 29/319 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG GHS+AV S G VY++G NS+GQLG G+ + P P ++L + +
Sbjct: 350 AGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHPTPGQAL--LPFVCGNHRLEPEEQ 407
Query: 110 ISDAGQVYAFGKDSFGEAEYGV----QGTKLVTSP----QLVESLKNIFVVQAAI----- 156
D + G + AE G G K LV FV +
Sbjct: 408 CDDGNSINGDGCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVA 467
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G FT +G+++ + +LG + N + P + T V +AAG + LA
Sbjct: 468 GAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVS-VSTASLTDVKNVAAGGFHSLA 526
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L S ++S G +LG SR D R V VAAG H+ VV
Sbjct: 527 LG---SDGKLWSWGSNSLSQLGV-SR-DTLGSRASPALVSGVSGVVAVAAGETHSLVVLS 581
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKV-----VQALNDVKAIHVATGDYTTFVVSEDGD 331
+G+V WG+ YG +G G C VP + N + VA G + + DG
Sbjct: 582 NGKVSAWGYNGYGQIGDG---CSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638
Query: 332 VYSFGCGESASLGHNAIAD 350
V+++G S LG ++ D
Sbjct: 639 VWAWGRNNSGQLGDGSLVD 657
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 58/249 (23%)
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGY 211
+AA G +T + +G V+T+ + +LG T + P+ N VV+ +AAG
Sbjct: 41 RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPV--DFSNGMVVKRVAAGG 98
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ LA+ S +++ G G+LG GS T P ++ ++ V +AA +++
Sbjct: 99 SHALAVL---SDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNS 153
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV--------------- 316
A V DG+V TWG+ YG LG+G+ +S P V AL+D+K + V
Sbjct: 154 AAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLALRSGGTVW 213
Query: 317 -----------------------------------ATGDYTTFVVSEDGDVYSFGCGESA 341
+ GD + + DG V+++G
Sbjct: 214 AWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQG 273
Query: 342 SLGHNAIAD 350
LG + D
Sbjct: 274 QLGIGSFTD 282
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ AG H++A+ G V+++G N SGQLG GTT P + L G ++ AAG G
Sbjct: 297 EVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPGLTG--VVSVAAGDGH 354
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQ 132
++ + G+VY +G++S G+ G Q
Sbjct: 355 SVAVLSDGRVYTWGRNSAGQLGDGSQ 380
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 22/307 (7%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S AG H++A+ S G V+++GSNSSGQ+G GT + RP P++ R AA
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD--RPSPVQVTSIARAKAVAAQDA 309
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++++ D G V+A+G +S G+ G SP V V A G VL
Sbjct: 310 GSLVLLDDGGVFAWGLNSQGQLGIGTT----ADSPLPVRVRGLGAVTSLAAGTQHAVVLR 365
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G ++T+ G +LGH + + P ++ L N V +A+G + +A S
Sbjct: 366 ADGTLWTWGHGATGQLGHGSSERMLSPE-VVTRLSN--VASVASGSFHSVAALSDGS--- 419
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
V++ G G+LG G+ T+ P + + V V+A H+ + DG V WGW
Sbjct: 420 VWTWGRNTNGQLGDGTTTERHLPVRVPGLSGV----VSVSASGHHSFALRSDGTV--WGW 473
Query: 286 GR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GR G +G G + + P V+ L+ VKA+ A+G + DG V+++G + L
Sbjct: 474 GRNAQGQMGDGTTKDRASPARVEGLSSVKAL--ASGGSHMVALRTDGTVWTWGYNGAGQL 531
Query: 344 GHNAIAD 350
G D
Sbjct: 532 GDGTTTD 538
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 137/305 (44%), Gaps = 27/305 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G +S+AV G V+S+G+N SGQLG GT P+P++ L ++ + AGA + +
Sbjct: 957 GQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKAV--TAGAHHVVAV 1014
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G V+ +G ++FG+ G + P VE L N V+ + G + L + R
Sbjct: 1015 RHDGTVWGWGANAFGQVGDGTHFWRF--RPVRVEGLLN--AVETSAGEQHSLALLGDERA 1070
Query: 171 YTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
SWG+ DA G EP V+ L + +P V ++A + + AL +
Sbjct: 1071 --LSWGSHEYGQLGDAESGPSLEPVGVK---LPSSKVLVPAVSVSAWHQHAAALLADGT- 1124
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V + G G+LG G+ P + + V VA A H + DG V W
Sbjct: 1125 --VQTWGGNADGQLGDGTTESRATPITVAGLGAM----VAVAPAARHTLALRSDGTVWAW 1178
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G +G LG G+ ++P V L V AI A G Y + V EDG V+++G L
Sbjct: 1179 GDNTFGQLGDGSNTRRTLPVQVVGLEKVTAI--AAGSYHSLAVREDGTVWAWGYNVFGQL 1236
Query: 344 GHNAI 348
G +
Sbjct: 1237 GDGTM 1241
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V+++GSN GQLG G ++ P + L G+ + AAG ++
Sbjct: 156 AGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGV--VALAAGFDFSLA 213
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G +L +P V L+ + V A + + L +G
Sbjct: 214 VRSDGTVWAWGANGSGQLGDGTYIQRL--APTQVSQLQGVSAVTAGL--YHALALRSDGT 269
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + ++G T + P + V AG LL V++
Sbjct: 270 VWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLL------DDGGVFAW 323
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ D P + + +AAG HA V+ DG + TWG G G
Sbjct: 324 GLNSQGQLGIGTTADSPLPVRVRGLGAVT----SLAAGTQHAVVLRADGTLWTWGHGATG 379
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LGHG+ E P+VV L++V + VA+G + + DG V+++G + LG
Sbjct: 380 QLGHGSSERMLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRNTNGQLG 432
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 36/326 (11%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +AV G V+ +G+N+ GQ+G GT WR RP+R + ++ +AG ++
Sbjct: 1006 AGAHHVVAVRHDGTVWGWGANAFGQVGDGT--HFWRFRPVRVEGLLNAVETSAGEQHSLA 1063
Query: 110 ISDAGQVYAFGKDSFG---EAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ + ++G +G +AE G G KL +S LV + V + + A
Sbjct: 1064 LLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPA------VSVSAWHQHAA 1117
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
L +G V T+ D +LG T + P + G +V +A + LAL +
Sbjct: 1118 ALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGA---MVAVAPAARHTLALRSDGT 1174
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
V++ G G+LG GS T P Q++ L+ V +AAG++H+ V +DG V
Sbjct: 1175 ---VWAWGDNTFGQLGDGSNTRRTLP-----VQVVGLEKVTAIAAGSYHSLAVREDGTVW 1226
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
WG+ +G LG G + +VP + L+ A+ VA G+Y + ++ DG +++ G
Sbjct: 1227 AWGYNVFGQLGDGTMDARAVPTRMLGLD--GAVAVAGGEYHSLMLRFDGTLWATGNNSHG 1284
Query: 342 SLGHNAIADGQVCSLLFLSIFQYLQI 367
LG + LS FQ +++
Sbjct: 1285 QLGEGTFTN-------RLSPFQVVEL 1303
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 25/310 (8%)
Query: 45 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAG 103
S+ AG HS+ VT G V+++G N SGQLG G+ + + + L + I AAG
Sbjct: 50 TSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDVTSI--AAG 107
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + V+ +G ++ G+ G + +PQ V L ++ V A G F +
Sbjct: 108 DAHSLALRADRTVWTWGGNNAGQVGDGTNVDR--PTPQKVPGLSDVVAV--AAGEFHSLA 163
Query: 164 LSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
L +G V+ +WG++ +LG H++P P ++G VV +AAG+ + LA+
Sbjct: 164 LRADGTVW--AWGSNFYGQLGRGHSQPGP-SPAQVVGL---TGVVALAAGFDFSLAVRSD 217
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
+ V++ G G+LG G+ P + Q Q ++ V AG +HA + DG V
Sbjct: 218 GT---VWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVS----AVTAGLYHALALRSDGTV 270
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
WG G +G G P VQ + +A VA D + V+ +DG V+++G
Sbjct: 271 WAWGSNSSGQMGDGT--WTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQ 328
Query: 341 ASLGHNAIAD 350
LG AD
Sbjct: 329 GQLGIGTTAD 338
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 142/299 (47%), Gaps = 24/299 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-TMLISD 112
H+ A+ + G V ++G N+ GQLG GTTE R PI ++ G+ + A A A R T+ +
Sbjct: 1115 HAAALLADGTVQTWGGNADGQLGDGTTES--RATPI-TVAGLGAMVAVAPAARHTLALRS 1171
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+A+G ++FG+ G + T P V L+ + + A G++ + + +G V+
Sbjct: 1172 DGTVWAWGDNTFGQLGDGSNTRR--TLPVQVVGLEKVTAI--AAGSYHSLAVREDGTVWA 1227
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+ + +LG T P +LG L+ V +A G + L L + +++ G
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLG-LDG--AVAVAGGEYHSLMLRFDGT---LWATGNN 1281
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ T+ P FQ++ L V V AG +H+ + +DG V TWG G L
Sbjct: 1282 SHGQLGEGTFTNRLSP-----FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQL 1336
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G G VP V L + + V G TF V + +++G LG +D
Sbjct: 1337 GDGTVTTRRVPAPVPGLTAIAS--VGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDSSD 1391
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 25/313 (7%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 93
+LA C R S AG HS+ + G V+S+G NS GQLG G P + L
Sbjct: 793 VLARNLPCARAAS---AGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLW 849
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
G ++ AG +M++ G V+ +G + G+ G G + SP V+ L I
Sbjct: 850 G--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDR--ASPLEVKGLAGI--AT 903
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+G V+S++G V+ +WG + R LG T + P + G + ++ G
Sbjct: 904 GVMGEAHALVVSQDGTVW--AWGANGRGQLGDGTTTSSASPVRVAGLSA---AMNVSVGQ 958
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y +LA P G V+S G G+LG G+ P+ ++ + V AGA H
Sbjct: 959 AY--SLAVLPDGT-VWSWGANDSGQLGDGTNVARTTPKPVQDLADVK----AVTAGAHHV 1011
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
V DG V WG +G +G G P V+ L + A+ + G+ + + D
Sbjct: 1012 VAVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGL--LNAVETSAGEQHSLALLGDER 1069
Query: 332 VYSFGCGESASLG 344
S+G E LG
Sbjct: 1070 ALSWGSHEYGQLG 1082
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+ V + G V ++G N+SGQLG G+T P R+L R A+AG +++
Sbjct: 756 AGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCARA--ASAGRQHSLV 813
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G V+++G +S G + G G P VE L + V A G + VL +G
Sbjct: 814 LACDGTVWSWGGNSQG--QLGDGGVTSRAYPAKVEGLWGVVAVLA--GGDSSMVLRADGT 869
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYS 228
V+T+ +LG T + P LE + IA G AL G V++
Sbjct: 870 VWTWGANGSGQLGDGTLGDRASP------LEVKGLAGIATGVMGEAHALVVSQDGT-VWA 922
Query: 229 VGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ T P R+ +N V+ G ++ V DG V +WG
Sbjct: 923 WGANGRGQLGDGTTTSSASPVRVAGLSAAMN-----VSVGQAYSLAVLPDGTVWSWGAND 977
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G LG G + PK VQ L DVKA V G + V DG V+ +G
Sbjct: 978 SGQLGDGTNVARTTPKPVQDLADVKA--VTAGAHHVVAVRHDGTVWGWGA 1025
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 21/317 (6%)
Query: 34 LLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 92
+L+ E R N ++A G HS+A S G V+++G N++GQLG GTT E P + L
Sbjct: 389 MLSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGL 448
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
G+ + +A+G L SD G V+ +G+++ G+ G TK SP VE L ++ +
Sbjct: 449 SGV-VSVSASGHHSFALRSD-GTVWGWGRNAQGQMGDGT--TKDRASPARVEGLSSVKAL 504
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
A G L +G V+T+ + +LG T + P + G V +AAG
Sbjct: 505 --ASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSG---VTSVAAGAY 559
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 271
+ LAL + V++ G G G+LG G+ P Q+ L VV +AAGA H
Sbjct: 560 FSLALRTDGT---VWAWGDGFEGQLGDGAGVQRASP-----VQVTGLTRVVKLAAGAAHG 611
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
V DG V WG G +G G+ V L V + V G Y + +++DG
Sbjct: 612 LAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSS--VVGGLYHSMALAQDGT 669
Query: 332 VYSFGCGESASLGHNAI 348
+ ++G G +
Sbjct: 670 LRAWGGNAYGQFGDGGV 686
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV G V+++G N GQLG GT + R P R L + A G +++
Sbjct: 1211 AGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA--RAVPTRMLGLDGAVAVAGGEYHSLM 1268
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G ++A G +S G+ G +L SP V L + V+A G + + L +G
Sbjct: 1269 LRFDGTLWATGNNSHGQLGEGTFTNRL--SPFQVVELDQVRTVRA--GGYHSVALREDGT 1324
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+T+ +LG T P P+ G + + AG + A+ + ++
Sbjct: 1325 VWTWGHNGQGQLGDGTVTTRRVPAPVPGL---TAIASVGAGTSHTFAVGSE-----TWAW 1376
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G +D P L++ + V AG + G DG +WG +G
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLVKGLHGVK----SVLAGGDFSVAQGADGSAMSWGTNVHG 1432
Query: 290 CLGHGNEECESVPKVV 305
LG G +VP V
Sbjct: 1433 TLGIGLPGQRTVPGAV 1448
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 20/300 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S + G HS+A+ G + ++G N+ GQ G G + L GI+++ A+
Sbjct: 652 SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGAS--YL 709
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ + + G + +G + FG+ G G + P V L + A G + ++
Sbjct: 710 HVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--PVQVRGLGQGRRLSA--GRAHSLLVR 765
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGM 224
+G V + +LG + + P+L N+P + A AG + L LAC +
Sbjct: 766 ADGTVLAWGQNTSGQLGDGSTTH--RASPVL--ARNLPCARAASAGRQHSLVLACDGT-- 819
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
V+S G G+LG G T +P +E + V V AG + V+ DG V TWG
Sbjct: 820 -VWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV----VAVLAGGDSSMVLRADGTVWTWG 874
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG G + P V+ L + G+ VVS+DG V+++G LG
Sbjct: 875 ANGSGQLGDGTLGDRASPLEVKGLAGIAT--GVMGEAHALVVSQDGTVWAWGANGRGQLG 932
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 26/299 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+ + G V+++G N +GQLG GTT + P + L G+ + AAGA ++
Sbjct: 506 SGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV--AAGAYFSLA 563
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G D F E + G SP V L VV+ A G + +G
Sbjct: 564 LRTDGTVWAWG-DGF-EGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGT 619
Query: 170 VYTFSWGNDARLGHHTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
V+ + + ++G + + V+ + L G V + G + +ALA + +
Sbjct: 620 VWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG------VSSVVGGLYHSMALAQDGT---L 670
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGW 285
+ G G+ G G T PR++ + L + ++ A H V +DG + TWG+
Sbjct: 671 RAWGGNAYGQFGDGGVT----PRVVAG-AVPGLSGIKLLGASYLHVLAVREDGMLLTWGY 725
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
R+G LG G S+P V+ L + ++ G + +V DG V ++G S LG
Sbjct: 726 NRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSLLVRADGTVLAWGQNTSGQLG 782
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 23/316 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S+A+ + G V+++G GQLG G + R P++ R+++ AAGA +
Sbjct: 556 AGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQ--RASPVQVTGLTRVVKLAAGAAHGLA 613
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ D G V+A+G ++ G+ G + + V+ V G + + L+++G
Sbjct: 614 VRDDGTVWAWGDNTEGQMGDGSWSDRF----RAVQVYGLTGVSSVVGGLYHSMALAQDGT 669
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+ +WG +A G + V P + G + + +++ G YL LA + GM + +
Sbjct: 670 LR--AWGGNA-YGQFGD-GGVTPRVVAGAVPGLSGIKLL-GASYLHVLAVREDGM-LLTW 723
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ P + Q ++AG H+ +V DG V WG G
Sbjct: 724 GYNRFGQLGLGAAGWSSLPVQVRGLG----QGRRLSAGRAHSLLVRADGTVLAWGQNTSG 779
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G+ + P + + L +A + G + V++ DG V+S+G LG
Sbjct: 780 QLGDGSTTHRASPVLARNLPCARA--ASAGRQHSLVLACDGTVWSWGGNSQGQLG----- 832
Query: 350 DGQVCSLLFLSIFQYL 365
DG V S + + + L
Sbjct: 833 DGGVTSRAYPAKVEGL 848
>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
Length = 448
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 87 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 146
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 147 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 204
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 205 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 264
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 265 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 321
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 322 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 374
Query: 331 DVYSFG 336
S+G
Sbjct: 375 STISWG 380
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 133 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 191
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 192 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 250
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 251 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 308
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 309 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 359
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 360 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 416
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 417 MGYSHSLVIARD 428
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 65 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 122
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 123 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 178
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 179 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 219
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 90 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 148
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 149 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 201
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 202 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 261
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 262 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 307
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 310 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 363
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 364 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 423
Query: 163 VLSRE 167
V++R+
Sbjct: 424 VIARD 428
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 -RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 266 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
G H A V G + +G G G LG G N +C S K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
L+ L ++Q++ G + LALA S ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMND 163
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 19/262 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++AV G ++S+G N +GQLG + + E PR I+ L I+Q A G ++
Sbjct: 92 GNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+++ G++YA+G + G+ G T + P+ + +L + + A G + T V+S+ G
Sbjct: 152 LTNDGELYAWGSNREGQLGLGSYTTTEI-KPKRISTLAAVPIAFIACGGYHTIVISKSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGM 224
V FSWG + +LG NDV+ L L TL N V G + + L
Sbjct: 211 V--FSWGRNTFGQLG----LNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDG--- 261
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 283
V++ G G+ G+LGHG+ T+E PR + +L+ ++ G H A+V GRV W
Sbjct: 262 GVFTCGAGMYGQLGHGNTTNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRVYAW 319
Query: 284 GWGRYGCLGHGNEECESVPKVV 305
G G G LG+ + + P+VV
Sbjct: 320 GLGGAGQLGNRASQSATTPQVV 341
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HSIA+T+ G +Y++GSN GQLG G+ T E +P+ I +L + I A G
Sbjct: 141 QIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGY 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T++IS +G V+++G+++FG+ G+ + P + +L+N V A G F+ L+
Sbjct: 201 HTIVISKSGAVFSWGRNTFGQL--GLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH N++ P ++ L V QI+ G + LAL PS
Sbjct: 259 MDGGVFTCGAGMYGQLGHGNTTNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ + P+++
Sbjct: 316 VYAWGLGGAGQLGNRASQSATTPQVV 341
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 19/307 (6%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G +++A+T +G VYS G+N GQLGH + R + I L + A G
Sbjct: 38 QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFRKIACGNCH 95
Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ +++ GQ++++G + G+ V T+ V P++++ L +VQ A G + L+
Sbjct: 96 TLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV--PRMIKVLGTNVIVQIACGTEHSIALT 153
Query: 166 REGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+G +Y +WG++ LG +T +++P + TL +P+ IA G + + ++
Sbjct: 154 NDGELY--AWGSNREGQLGLGSYT-TTEIKPKR-ISTLAAVPIAFIACGGYHTIVIS--K 207
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
SG AV+S G G+LG P + L N + G + + DG V
Sbjct: 208 SG-AVFSWGRNTFGQLGLNDVQQRNLPCQLR--TLRNAKVCYATCGEEFSVFLTMDGGVF 264
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHGN E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 265 TCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Query: 341 ASLGHNA 347
LG+ A
Sbjct: 325 GQLGNRA 331
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 16/301 (5%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
++ +GS G+LG G E+E + PR + ++ + Q A G T+ I+ G+VY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+ +G+ + +L QL+ L + A GN T ++ G+++++ + +L
Sbjct: 61 NDYGQLGHEKARKRL----QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 241
G ++ ++ L +VQIA G + +AL + +Y+ G G+LG GS
Sbjct: 117 GLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT---NDGELYAWGSNREGQLGLGS 173
Query: 242 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
T E P+ I + + +A G +H V+ + G V +WG +G LG + + +
Sbjct: 174 YTTTEIKPKRISTLAAVPI--AFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVCSL 356
+P ++ L + K + G+ + ++ DG V++ G G LGH N I QV L
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMEL 291
Query: 357 L 357
+
Sbjct: 292 M 292
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+I ++ G V+S+G N+ GQLG ++ P +R+L+ ++ A G ++ ++
Sbjct: 201 HTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMD 260
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T A++ GRVY
Sbjct: 261 GGVFTCGAGMYGQLGHGNTTNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 318
Query: 173 FSWGNDARLGHHTEPNDVEPHPLL 196
+ G +LG+ + P +L
Sbjct: 319 WGLGGAGQLGNRASQSATTPQVVL 342
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 20 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGC 79
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 80 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 139
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 140 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 197
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 198 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 257
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 258 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 314
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 315 DFPGRGASRIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 368
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 369 SLACGK-SSIIVAADESTISWG 389
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 142 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 200
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 201 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 259
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 260 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 317
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+I AGY C AV VG + SR +P+ ++ ++
Sbjct: 318 GRGASRIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 368
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 369 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 425
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 426 MGYSHSLVIARD 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 74 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 131
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 132 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 187
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 188 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 228
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 99 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 157
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 158 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 210
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 211 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 270
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 271 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 316
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R S+ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 319 RGASRIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 372
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 373 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 432
Query: 163 VLSRE 167
V++R+
Sbjct: 433 VIARD 437
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 82
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G + G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAG--QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+Y+ GCG G+LG G + K P ++ +
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 226
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 R-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G G LGHG+ E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVT 179
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 79 TTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
TTE+ PR I+ L I+Q + G + ++ GQ + +GK+S G+ G +
Sbjct: 2 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-Q 60
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLL 196
TSPQ V SL+ I + Q A G + LS G V+ + N +LG E + P H L
Sbjct: 61 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 120
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 256
L VV I+ G + L SG V++ G G G+LGHGS DE +PR + +L
Sbjct: 121 --LRTQKVVYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHGSMNDEVNPRRV--LEL 173
Query: 257 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
+ + +A G H A V G + +G G G LG G N +C S K
Sbjct: 174 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 240
T + V L+ L ++Q++ G + LALA ++ G G+LG G
Sbjct: 2 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFP 58
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S+T + R +E L VAAG H+ + G V WG G LG +E+
Sbjct: 59 SQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 113
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
P V+ L K ++++ G+ T V+++ G V++FG G LGH ++ D
Sbjct: 114 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMND 163
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ +G ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 146/296 (49%), Gaps = 34/296 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----EWRPRPIR-SLQGIRIIQAAAGAG 105
G + A+T G ++ +G N G G+ EE +W PR I L G+ I A G
Sbjct: 365 GEYQTCALTDSGELFVWGENKYG--GNLVCEERTGSQWLPRQISGPLAGVSISNVACGDW 422
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T +S +GQ++ +G +FG +G + V+ P+ VESLK ++V A G++ TA +
Sbjct: 423 HTAAVSSSGQLFTYGDGTFGVLGHG--NLQSVSHPKEVESLKGLWVKSVACGSWHTAAIV 480
Query: 166 RE-----------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
G+++T+ G+ RLGH ++P + +E+ VQ++ G +
Sbjct: 481 DVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEH-DFVQVSCGR--M 537
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWH 270
L +A +G +Y++G + G+LG+ ++ +L E+F +++G++H
Sbjct: 538 LTVALTRTG-KIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEF------VKEISSGSYH 590
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
A + G V TWG G G LG GN E +VP +V+AL D + +A G T +
Sbjct: 591 VAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAI 646
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 30/256 (11%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S G H+ AV+S G ++++G + G LGHG + P+ + SL+G+ + A G+
Sbjct: 415 SNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSW 474
Query: 106 RTMLISDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
T I D G+++ +G G + KL P V L VQ
Sbjct: 475 HTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKL--QPTCVAQLVEHDFVQV 532
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND----VEPHPLLGTLENIPVVQIAAG 210
+ G T L+R G++YT +LG+ N VE G L+ V +I++G
Sbjct: 533 SCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVE-----GKLKEEFVKEISSG 587
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVA 265
++ AL SG +VY+ G G G+LG G+ D P L+E + +Q + + A
Sbjct: 588 SYHVAALT---SGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTA 644
Query: 266 AGAWHAAVVGQDGRVC 281
A H ++ D C
Sbjct: 645 AICLHKSISVSDQSAC 660
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 18/231 (7%)
Query: 129 YGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
+G T V S P+L+E + V ++G A++++ G V+ + G+ +LGH +
Sbjct: 283 FGYHSTLQVDSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVD 342
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
DV ++ +L+ V +A G AL SG GG L RT +
Sbjct: 343 -MDVSSPTIVESLDGFLVKFVACGEYQTCALT--DSGELFVWGENKYGGNLVCEERTGSQ 399
Query: 247 -HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
PR I L + VA G WH A V G++ T+G G +G LGHGN + S PK V
Sbjct: 400 WLPRQISG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458
Query: 306 QALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGH 345
++L + VA G + T + + G ++++G G+ LGH
Sbjct: 459 ESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGH 509
>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
Length = 479
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 43/311 (13%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHSI ++++G YSFG NS GQLG G T P PI +L+G II AA G ++ ++D
Sbjct: 121 GHSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTD 180
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSREG 168
G VYA G + + G T+PQ++ + + +V+ G F+ +L G
Sbjct: 181 TGTVYACGDNKSAQCGLG------HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNG 234
Query: 169 RVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLENIPVV 205
+++F +LGH+T+ ++ P + + ++++ +V
Sbjct: 235 ALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIV 294
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
+ G + +A+ S YS G G G+LGH + DE PRLI+ F V
Sbjct: 295 DFSCGNNHTVAID---SKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVH 351
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
GA ++ V + G + +G + E PK VQ L V T + T+ V
Sbjct: 352 CGATYSLAVNEHGALFMFGQTKR------TGEANMYPKPVQDLTGWNIRSVGTSN-TSIV 404
Query: 326 VSEDGDVYSFG 336
++ D + ++G
Sbjct: 405 IAADDSLIAWG 415
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
Q R+I + AG ++LIS G+ Y+FG++S G+ +G T+ + P+ + +LK ++
Sbjct: 109 QKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNII 166
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
AA+G + ++ G VY A+ G HT P + P + T P+V++ G
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVRYT--GAPIVKVGCGA 224
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQFQLL---------- 257
+ + L C A++S G G+LGH TD K+ +L F+++
Sbjct: 225 EFSMILDCN---GALHSFGLPEYGQLGH--NTDGKYFVTSTKLSYHFEMVPKHIAFFFEK 279
Query: 258 ----------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
++ V + G H + R +WG+G +G LGH + ESVP++++
Sbjct: 280 SKDGHVSPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKY 339
Query: 308 LND----VKAIHVATGDYTTFVVSEDGDVYSFG 336
+ V+++H G + V+E G ++ FG
Sbjct: 340 FDSQARGVRSVHC--GATYSLAVNEHGALFMFG 370
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 135/313 (43%), Gaps = 47/313 (15%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 105
A G HS+ VT G VY+ G N S Q G G TT + P +R G I++ GA
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAE 225
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------V 143
+M++ G +++FG +G+ + G VTS +L V
Sbjct: 226 FSMILDCNGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHV 285
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+K++ +V + GN T + + R Y++ +G RLGH + ++ P L+ ++
Sbjct: 286 SPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPR-LIKYFDS-- 342
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL---GHGSRTDEK--HPRLIEQFQLLN 258
A G + ++ C A YS+ G L G RT E +P+ ++ N
Sbjct: 343 ---QARG---VRSVHCG----ATYSLAVNEHGALFMFGQTKRTGEANMYPKPVQDLTGWN 392
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHV 316
++ V + + V+ D + WG YG LG G+ + + PK V + + V
Sbjct: 393 IRSVGTSNT---SIVIAADDSLIAWGVSPTYGELGTGDINKSTARPKEVTRMEGLNITQV 449
Query: 317 ATGDYTTFVVSED 329
A G T ++S+D
Sbjct: 450 AMGYSHTLLLSDD 462
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 243 TDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
+ + HP L +F + +V A H+ ++ +G ++G G LG G+ +
Sbjct: 93 SKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRN 152
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGH 345
+P+ + L IH A G + V++ G VY+ G +SA LGH
Sbjct: 153 IPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGH 199
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 36/222 (16%)
Query: 163 VLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
++S EG Y+F + +LG T N EP P TL+ ++ A G + L +
Sbjct: 125 LISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIP---TLKGFNIIHAAVGRNHSLFVT-- 179
Query: 221 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 279
VY+ G + G G T + L+ P+V V GA + ++ +G
Sbjct: 180 -DTGTVYACGDNKSAQCGLGHTTPQI---LVPTRVRYTGAPIVKVGCGAEFSMILDCNGA 235
Query: 280 VCTWGWGRYGCLGHGNE------------ECESVPKV------------VQALNDVKAIH 315
+ ++G YG LGH + E VPK V + DV +
Sbjct: 236 LHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIVD 295
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ G+ T + YS+G G LGH D V L+
Sbjct: 296 FSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLI 337
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H+ A+TS G V FG+ GQLG G T+ P+ + L G +++ AAG ++ ++++
Sbjct: 55 HTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTES 114
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G +YAFG + G+ G T +PQ V L + Q A G TAVL+ G ++ F
Sbjct: 115 GDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMF 174
Query: 174 SWGNDARL---GHHTE-PNDVEPHPLLGT-LENIPVVQIAAGYCYLLALACQPSGMAVYS 228
D L GH E P V P L T L+ VVQI G + +AL + VY
Sbjct: 175 GNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALT---AAGGVYC 231
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G + P L+ + L + + VA G H V V +G R+
Sbjct: 232 WGENGRGQLGTGDTQNRYTPSLVCK-PLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRH 290
Query: 289 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G LG G VP + L + + G + T + + G+ Y GC
Sbjct: 291 GQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMGC 340
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
V++VG G+LG+G+ T FQL Q + V G H + DG V +G
Sbjct: 10 VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS-- 342
G G LG GN + S P+ V L+ + +A G + ++E GD+Y+FG S
Sbjct: 70 NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLG 129
Query: 343 LGHNAIADGQV 353
LGHN A Q
Sbjct: 130 LGHNFTAKEQT 140
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 101 bits (252), Expect = 6e-19, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 27/306 (8%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEE-------------WRPRPIRSLQGIRIIQAAAGAGRTM 108
G+V+++G + G+LG E+E ++P ++ I II+ + G T+
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ----AAIGNFFTAVL 164
+S G VY++G + G G Q + +P +++ KN + Q A G+ L
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSM--TPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G VY++ G RLGH E + P ++G L ++ I AG A++ +
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNE-- 380
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++ G GL G+LG G + P ++E + ++ + A G+ H+ + ++G+ WG
Sbjct: 381 -LFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDI--ALGSNHSLCILRNGKAMCWG 437
Query: 285 WGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+ G LG + + PK + L+ K +A G + + ++E+G++YSFG +
Sbjct: 438 SSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGK 497
Query: 343 LGHNAI 348
LG++ I
Sbjct: 498 LGYDEI 503
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 29/313 (9%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+N + IA G H +++ +G+VYS+G+ G+LGHG E P+ I L+ +I+ A
Sbjct: 308 QNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEA 367
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G G + IS +++ +G G G T V P ++E LK+ V A+G+ +
Sbjct: 368 GEGSSAAISIKNELFIWGVGLHG--RLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSL 425
Query: 163 VLSREGRVYTFSWGNDARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+ R G+ + D +LG T + N +P L+ TL+ + QIAAG + +AL
Sbjct: 426 CILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELV-TLDKEKLYQIAAGPFHSIALT-- 482
Query: 221 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+YS G GKLG+ + + + PR I + A G + R
Sbjct: 483 -ENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIF-------------ARKTGLNDR 528
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+Y +++ +V Q L + I G +T + DG +Y G +
Sbjct: 529 R-----DKYQLFNQFDDQM-TVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNK 582
Query: 340 SASLGHNAIADGQ 352
LG + A G+
Sbjct: 583 YGQLGFSKRAGGK 595
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 51/321 (15%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
H +AVT +G + +G N +GQLG G + +P I+SLQ II A+G ++ +SD
Sbjct: 686 HVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSD 745
Query: 113 AGQVYAFGKDSFGEAEYGVQG-------------------------TKLVTSPQLVESLK 147
G+V G + FGE G+ TK+ +P++++ L+
Sbjct: 746 LGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLE 805
Query: 148 NIFVVQAAIGNFFTAVLS---REGRVYTFSWGN--DARLGHHTEPNDVEPHPL-LGTLEN 201
+I + AA N A+ + +E + F+WG + GH + ND P + + L++
Sbjct: 806 SIGFI-AAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKD 864
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNL 259
+Q + G + +AL +G + G +G DEK P +E +
Sbjct: 865 TKFIQASCGSKHTIAL--DTTGHIWF---FGYKPSVGIEDFNDEKQFMPARLETPSKIQE 919
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV----QALNDVKAIH 315
+++G H V Q G V +G+G+ + N + S K Q N+ KA+
Sbjct: 920 PFKFISSGEEHNLAVTQSGLV--YGFGK-----NTNTKINSSHKEYLYFDQVENEEKAVL 972
Query: 316 VATGDYTTFVVSEDGDVYSFG 336
A G + ++ G Y++G
Sbjct: 973 TACGANHSVLIDTKGVPYTWG 993
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 166 REGRVYTFSWG--NDARLG--------HHTEPNDVEPHPLLGTL----ENIPVVQIAAGY 211
R G F+WG N+ RLG + E + E P ++ +I +++++ G
Sbjct: 202 RCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGN 261
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------FQLLNLQPVVVA 265
+ LAL+ + VYS G G G LG G + P +I+ FQ N++ + A
Sbjct: 262 SFTLALSQEGH---VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQ--NIKDI--A 314
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 325
G+ H + G V +WG G+ G LGHG+E E++PK + L K + + G+ ++
Sbjct: 315 CGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAA 374
Query: 326 VSEDGDVYSFGCGESASLGHNAIAD 350
+S +++ +G G LG A+
Sbjct: 375 ISIKNELFIWGVGLHGRLGTGKTAN 399
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 98/427 (22%), Positives = 155/427 (36%), Gaps = 143/427 (33%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPI---------------- 89
Q AGP HSIA+T G +YSFG++ G+LG+ + + PR I
Sbjct: 470 QIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRR 529
Query: 90 -------------------RSLQGIRIIQAAAGAGRTMLISDAGQVY------------- 117
+ L G +IQA G T+ + + GQ+Y
Sbjct: 530 DKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGFS 589
Query: 118 --AFGKDSFGEA----------EYGVQGTKL---------------------VTSPQLVE 144
A GKD G + G+ G V PQL +
Sbjct: 590 KRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIGGGFLQQNSDDVLPPQLKK 649
Query: 145 SLKNIFVVQ---------------------AAIGNFFTAVLSREGRVYTFSWG--NDARL 181
L + +Q + G F ++ EG TF WG ++ +L
Sbjct: 650 KLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGA--TFGWGRNDNGQL 707
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------CQPSGMAVY-SVGCGLG 234
G + V + +L++ ++ A+G + L L+ C SG + +G GL
Sbjct: 708 GMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLC--SGFNEFGELGIGLN 765
Query: 235 GKLGHGSRT-------DEKHPR-LIEQFQLLNLQPVV---------VAAGAWHAAVVGQD 277
G + DE + R LIE + L P + +AAG H+ +
Sbjct: 766 STSGGADKKENPDEIYDENYQRQLIE--TKIELTPKIIKGLESIGFIAAGKNHSIAIRTY 823
Query: 278 GR------VCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSED 329
R + TWG G +G GHG+ + + +P++V+ L D K I + G T +
Sbjct: 824 KRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTT 883
Query: 330 GDVYSFG 336
G ++ FG
Sbjct: 884 GHIWFFG 890
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ----AAAGAGR 106
G ++A++ +G VYS+G +SG LG G P I+ + + Q A G+
Sbjct: 260 GNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNH 319
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ + G VY++G G +G + + + P+ + L+ ++ G +A +S
Sbjct: 320 VLSLDHQGIVYSWGNGQGGRLGHGDETGENI--PKEIIGLRQYKILMIEAGEGSSAAISI 377
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+ ++ + G RLG N ++P +L L++ V IA G + L + M
Sbjct: 378 KNELFIWGVGLHGRLGTGKTANVLKP-VMLEDLKDQKVEDIALGSNHSLCILRNGKAMC- 435
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
G GKLG + D + E L + +AAG +H+ + ++G + ++G
Sbjct: 436 --WGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNS 493
Query: 287 RYGCLGH 293
+ G LG+
Sbjct: 494 KDGKLGY 500
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRY--GCLGHGNEE-CESVPKVVQALNDVKAIHVATGD 320
V+ G +H V +G T+GWGR G LG G ++ S P +++L D I A+G+
Sbjct: 680 VSTGYFHVLAVTHEG--ATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGE 737
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
+ +S+ G+V G E LG
Sbjct: 738 SHSLFLSDLGEVLCSGFNEFGELG 761
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G G ++ VT +G VYS G GQLG G+ +E I S+ ++I AAG ++ +
Sbjct: 81 GQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIP-EKVITCAAGDRHSLFV 139
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 168
++ G +Y+ G GE G ++ T PQLVESL + +++ A G+ F+ LS G
Sbjct: 140 TEQGHLYSCGYGKRGELGLGTISRRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESG 198
Query: 169 RVYTFSWGNDARLGHHTEP------------NDVEPHP-LLGTLENIPVVQIAAGYCYLL 215
+VY+F ND LGH P ++E P L+ LE + I+ G +
Sbjct: 199 KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGH-- 256
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A A G+A + GCG + + + P+ + F L +V+ GA H +
Sbjct: 257 AFAINKEGVA-FGWGCGRYHCFATDNEVNWEQPQAL--FHLPGPWKQIVSGGA-HTLGLT 312
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQAL--NDVKAIH-VATGDYTTFVVSEDGD 331
+ G+V WG +GCLG G + P++V+ L + I +A G + + V +G
Sbjct: 313 KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGY 372
Query: 332 VYSFGCGESASLGHNAIAD 350
VYS+G G + +LG D
Sbjct: 373 VYSWGRGHAGALGTGEEED 391
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEE----------WRPRPIRSLQGIRIIQAAAGAGRTMLI 110
+ +VY++G++ G GH +EE +RP+ + SLQ I A G G T+ +
Sbjct: 29 RSIVYAWGNSDGGWTGHLPSEEYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFV 88
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ GQVY+ G +G + G+ K V L++S+ V+ A G+ + ++ +G +
Sbjct: 89 TQQGQVYSSGVGRYG--QLGLGSLKEVEGITLIDSIPEK-VITCAAGDRHSLFVTEQGHL 145
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSGMAVYS 228
Y+ +G LG T +E L+ +L E ++++AAG+ + +AL+ SG VYS
Sbjct: 146 YSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALS--ESG-KVYS 202
Query: 229 VGCGLGGKLGHGS--------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
G G LGHG R E PRLI + ++ ++ G+ HA +
Sbjct: 203 FGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQME--YISCGSGHAFAI 260
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G WG GRY C NE P+ + L + +G T +++ G V++
Sbjct: 261 NKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPGPWK-QIVSGGAHTLGLTKGGQVWA 319
Query: 335 FGCGESASLG 344
+G LG
Sbjct: 320 WGVNHFGCLG 329
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 106
AG HS+ VT +G +YS G G+LG GT P+ + SL + +II+ AAG G
Sbjct: 131 AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 190
Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 154
++ +S++G+VY+FG + G +G V G + TSP+L+ +L+ +
Sbjct: 191 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 250
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G+ +++EG + + G E N +P L P QI +G +
Sbjct: 251 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 308
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
L L G V++ G G LG G RT PR++E+ +P+ +AAG + +
Sbjct: 309 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 365
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
V +G V +WG G G LG G EE + P +Q
Sbjct: 366 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 399
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 34/247 (13%)
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGN-DARLGHHTEPNDVEPH----------PL 195
KNI ++ N ++ S+ R ++WGN D H + E H +
Sbjct: 8 KNILFIRFIYHNRYS-YKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATSVYRPKI 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+ +L+N + +A G + L + Q VYS G G G+LG GS + + LI+
Sbjct: 67 VASLQNKSIRDVACGQGFTLFVTQQGQ---VYSSGVGRYGQLGLGSLKEVEGITLIDS-- 121
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQAL--NDVK 312
+ + + AAG H+ V + G + + G+G+ G LG G P++V++L + K
Sbjct: 122 -IPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEK 180
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLS 372
I VA G + +SE G VYSFG LGH G+V +FL W
Sbjct: 181 IIKVAAGHGFSIALSESGKVYSFGSANDGHLGH-----GEVPGGIFL--------WEPFH 227
Query: 373 SYRHLPT 379
S+R++ T
Sbjct: 228 SHRNMET 234
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 25/259 (9%)
Query: 38 EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 81
E+ R E + AG G SIA++ G VYSFGS + G LGHG
Sbjct: 172 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 231
Query: 82 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
E PR IR+L+ ++ + G+G I+ G + +G + + PQ
Sbjct: 232 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 289
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 198
+ L + Q G T L++ G+V+ + + LG T P + L
Sbjct: 290 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQ 348
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
P+ IAAG+ + +A+ + VYS G G G LG G D+ P I+ Q
Sbjct: 349 QAKEPIQWIAAGWFFSMAVDSEG---YVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEP 405
Query: 259 LQPVVVAAGAWHAAVVGQD 277
LQ + AG +A V +
Sbjct: 406 LQVDRIYAGFNYAIAVKDE 424
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 141/268 (52%), Gaps = 13/268 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 222
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 223 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 281
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALN 309
T+G R G LG+ + P++V+ ++
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 78 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
P+ +++L+ + V + G + + +GRV+ + G++ +LG + P ++
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 255
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 256 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 312
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ GD T V+++DG V++FG S LG++ +
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE 275
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 293 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +E PK + LND+K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
G T +++ G+V+ FG + G+ Y K PQLVE + +
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL 288
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 11/287 (3%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 116
A T + V+ +G N QLG + P +L + ++Q A G+ ++ G+V
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 480
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 174
YA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++
Sbjct: 481 YACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G
Sbjct: 540 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 595
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 292
G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG
Sbjct: 596 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 653
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G E ++P+ ++ LN + G + +++ G V+++G G
Sbjct: 654 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGR 700
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+ +G KD G G++G+K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 427 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 481
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ RLG V + L + V ++A A A G V+S G
Sbjct: 482 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGE 540
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLGH SR + PRLIE + ++ + A G+ H+A + G + TWG G YG L
Sbjct: 541 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRL 598
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGH 345
GHG+ + PK+V+ L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 599 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 654
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 460 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 519
Query: 103 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+G T L D G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 520 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 576
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 577 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 635
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 278
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 636 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 691
Query: 279 RVCTWGWGR 287
V TWG GR
Sbjct: 692 VVWTWGKGR 700
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 5/179 (2%)
Query: 169 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 425 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 481
Query: 228 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 482 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 541
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 542 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH 600
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 147/294 (50%), Gaps = 11/294 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
QA +G H++ + + VV++ G NS GQLG +P PI++L + + + G
Sbjct: 33 QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEH 92
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ PQ +++L I ++Q + G + + LS+
Sbjct: 93 SLAVCHKGKVFAWGVGSDGQLGTG-KFEEICFIPQKIKALTGIKIIQISCGYYHSLALSK 151
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 152 DGQV--FSWGKNSHGQLGLGQEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLSGTS 208
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+ G G+ PR + L NL V ++ G H AV+ Q+ +V T+
Sbjct: 209 FGWGNNSAGQLAFSGNNVLVQSYKPRSVG--ALKNLGVVYISCGYEHTAVLTQNDQVFTF 266
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 336
G +G LGH + P++V+ + + + G Y T V G V SFG
Sbjct: 267 GDNSFGQLGHNGVSQTTGPQLVEGIGGPVS-QIDCGSYHTLAYVYTTGQVVSFG 319
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
++QAA+G +L+ V+A G +S G+ G +G P+ +++L N+ V +
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
G + + +G+V+ + G+D +LG + L I ++QI+ GY + LA
Sbjct: 89 GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLA 148
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
L+ V+S G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 149 LS---KDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 203
Query: 276 QDGRVCTWGWGRYGCLGH--GNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G WG G L N +S P+ V AL ++ ++++ G T V++++ V
Sbjct: 204 LSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQV 263
Query: 333 YSFGCGESASLGHNAIA 349
++FG LGHN ++
Sbjct: 264 FTFGDNSFGQLGHNGVS 280
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+NS+GQL G+ + ++PR + +L+ + ++ +
Sbjct: 190 AQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISC 249
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G T +++ QV+ FG +SFG + G G T PQLVE + V Q G++ T
Sbjct: 250 GYEHTAVLTQNDQVFTFGDNSFG--QLGHNGVSQTTGPQLVEGIGGP-VSQIDCGSYHTL 306
Query: 162 AVLSREGRVYTF 173
A + G+V +F
Sbjct: 307 AYVYTTGQVVSF 318
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 29/321 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+A +G HS+ + S VYS G NS GQLG + + RP PI++L + I + G
Sbjct: 32 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEH 91
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 92 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Query: 167 EGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+G+V FSWG++ + L P V+ +LE IP+ Q+AAG + AL+
Sbjct: 151 DGQV--FSWGSNRQGQLGLGNNLCSQASPQKVK------SLEGIPLAQVAAGGTHSFALS 202
Query: 219 CQPSGMAVYSVGCGLGGKL---GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ + G G+L G+ ++ P I + LN+ V ++ G H +V+
Sbjct: 203 LMGTS---FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLT 257
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
+DG+V T+G L H P++++ + + G Y T V G V S
Sbjct: 258 EDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVS 316
Query: 335 FGCGESASLGHNAIADGQVCS 355
G G S + NA CS
Sbjct: 317 LGRGPSCT--SNATHQEAACS 335
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 13/267 (4%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+PR + + G+++++AA+G ++L+ +VY+ G +S G + G + + P+ ++
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRG--QLGQKSPQSTKRPEPIQ 75
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+L + + + G + + +GRV+T+ G++ +LG E ++ P + +L I
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEISFMPTKINSLAGIK 134
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV 262
++Q++ G+ + LAL+ V+S G G+LG G+ + P+ ++ + + L
Sbjct: 135 IIQVSCGHYHSLALS---EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL--A 189
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATG 319
VAAG H+ + G WG R G L GN E + P + AL + ++++ G
Sbjct: 190 QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCG 249
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHN 346
T V++EDG V++FG S L H+
Sbjct: 250 YEHTSVLTEDGQVFTFGGSSSEQLQHS 276
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L+ + ++ +
Sbjct: 189 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISC 248
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
G T ++++ GQV+ FG S + ++ + + PQL+E +
Sbjct: 249 GYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGI 290
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR +E L L + A+G H+ ++ + RV + G G LG + + P+ +
Sbjct: 17 RQPRRLEAGTGLKL--LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 74
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
QAL+ V V+ G + V G V+++G G LG
Sbjct: 75 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG 113
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G G ++ VT +G VYS G GQLG G+ +E I S+ ++I AAG ++ +
Sbjct: 40 GQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIPE-KVITCAAGDRHSLFV 98
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 168
++ G +Y+ G GE G ++ T PQLVESL + +++ A G+ F+ LS G
Sbjct: 99 TEQGHLYSCGYGKRGELGLGTISRRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESG 157
Query: 169 RVYTFSWGNDARLGHHTEP------------NDVEPHP-LLGTLENIPVVQIAAGYCYLL 215
+VY+F ND LGH P ++E P L+ LE + I+ G +
Sbjct: 158 KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGH-- 215
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
A A G+A + GCG + + + P+ + F L +V+ GA H +
Sbjct: 216 AFAINKEGVA-FGWGCGRYHCFATDNEVNWEQPQAL--FHLPGPWKQIVSGGA-HTLGLT 271
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQAL--NDVKAIH-VATGDYTTFVVSEDGD 331
+ G+V WG +GCLG G + P++V+ L + I +A G + + V +G
Sbjct: 272 KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGY 331
Query: 332 VYSFGCGESASLGHNAIAD 350
VYS+G G + +LG D
Sbjct: 332 VYSWGRGHAGALGTGEEED 350
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 84 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 143
+RP+ + SLQ I A G G T+ ++ GQVY+ G +G + G+ K V L+
Sbjct: 21 YRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYG--QLGLGSLKEVEGITLI 78
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--EN 201
+S+ V+ A G+ + ++ +G +Y+ +G LG T +E L+ +L E
Sbjct: 79 DSIPEK-VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREE 137
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--------------RTDEKH 247
++++AAG+ + +AL+ SG VYS G G LGHG R E
Sbjct: 138 EKIIKVAAGHGFSIALS--ESG-KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETS 194
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
PRLI + ++ ++ G+ HA + ++G WG GRY C NE P+ +
Sbjct: 195 PRLIRALEKEQME--YISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
L + +G T +++ G V+++G LG
Sbjct: 253 LPGPWK-QIVSGGAHTLGLTKGGQVWAWGVNHFGCLG 288
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 106
AG HS+ VT +G +YS G G+LG GT P+ + SL + +II+ AAG G
Sbjct: 90 AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 149
Query: 107 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 154
++ +S++G+VY+FG + G +G V G + TSP+L+ +L+ +
Sbjct: 150 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 209
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
+ G+ +++EG + + G E N +P L P QI +G +
Sbjct: 210 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 267
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 272
L L G V++ G G LG G RT PR++E+ +P+ +AAG + +
Sbjct: 268 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 324
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
V +G V +WG G G LG G EE + P +Q
Sbjct: 325 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 358
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
E E V G V P++V SL+N + A G FT ++++G+VY+ G +LG +
Sbjct: 9 EYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGS 68
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRT 243
+VE L+ ++ V+ AAG + L + Q +YS G G G+LG G SR
Sbjct: 69 -LKEVEGITLIDSIPE-KVITCAAGDRHSLFVTEQGH---LYSCGYGKRGELGLGTISRR 123
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------- 294
E P+L+E + + VAAG + + + G+V ++G G LGHG
Sbjct: 124 MET-PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLW 182
Query: 295 -----NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ E+ P++++AL + +++ G F ++++G + +GCG
Sbjct: 183 EPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCG 231
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
++ +L+N + +A G + L + Q VYS G G G+LG GS + + LI+
Sbjct: 25 IVASLQNKSIRDVACGQGFTLFVTQQGQ---VYSSGVGRYGQLGLGSLKEVEGITLIDS- 80
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQAL--NDV 311
+ + + AAG H+ V + G + + G+G+ G LG G P++V++L +
Sbjct: 81 --IPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEE 138
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNL 371
K I VA G + +SE G VYSFG LGH + G +FL W
Sbjct: 139 KIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGG-----IFL--------WEPF 185
Query: 372 SSYRHLPT 379
S+R++ T
Sbjct: 186 HSHRNMET 193
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 106/256 (41%), Gaps = 25/256 (9%)
Query: 38 EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 81
E+ R E + AG G SIA++ G VYSFGS + G LGHG
Sbjct: 131 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 190
Query: 82 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
E PR IR+L+ ++ + G+G I+ G + +G + + PQ
Sbjct: 191 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 248
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 198
+ L + Q G T L++ G+V+ + + LG T P + L
Sbjct: 249 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQ 307
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
P+ IAAG+ + +A+ + VYS G G G LG G D+ P I+ Q
Sbjct: 308 QAKEPIQWIAAGWFFSMAVDSEGY---VYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEP 364
Query: 259 LQPVVVAAGAWHAAVV 274
LQ + AG +A V
Sbjct: 365 LQVDRIYAGFNYAIAV 380
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRT 107
AG S+AV S+G VYS+G +G LG G E++W P I++ QG +++ + AG
Sbjct: 318 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 377
Query: 108 MLISD 112
+ + D
Sbjct: 378 IAVKD 382
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 6/207 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ G ++++G N+ GQLG G + P+ ++SL+GI + Q AG
Sbjct: 141 QMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGS 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +GK+S G+ G+ ++ +P V+ L+ VV + G TA+L+
Sbjct: 201 HSFALSLSGAVFGWGKNSAGQ--LGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G ++TF G +LGH + N++ P +L L V QIA G + LA PS
Sbjct: 259 KAGGLFTFGAGGSGQLGHDSLHNEINPRRVL-ELMGSEVSQIACGRKHTLAFV--PSSGT 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIE 252
+Y+ GCG G+LG G + K P +++
Sbjct: 316 LYAFGCGDLGQLGTGHENNVKCPTVVK 342
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 24/278 (8%)
Query: 39 ACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIR 96
A E+ + IA G HS+A++ +G +YS+G+ + GQLGH T E R PR I+ L +
Sbjct: 79 ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQK 138
Query: 97 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
I Q + G + + D GQ++ +G+++ G+ G G +SPQ V+SL+ I + Q
Sbjct: 139 IQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG-NGFISQSSPQKVKSLEGIPLAQVTA 197
Query: 157 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-----PNDVEPHPLLGTLENIPVVQIAA 209
G + LS G V F WG ++ +LG + E P V+P L VV I+
Sbjct: 198 GGSHSFALSLSGAV--FGWGKNSAGQLGLNDEQVKETPCHVKP------LRTHKVVYISC 249
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 269
G + A+ + G+ ++ G G G+LGH S +E +PR + +L+ + +A G
Sbjct: 250 GEEH-TAILTKAGGL--FTFGAGGSGQLGHDSLHNEINPRRV--LELMGSEVSQIACGRK 304
Query: 270 HA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
H A V G + +G G G LG G+E P VV+
Sbjct: 305 HTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 26/314 (8%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 98
A C +E G H++ + G VYS G N GQLGH + E P P+ +L I
Sbjct: 33 ATCVKE---VACGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIK 87
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIG 157
A G ++ +S G +Y++G + G+ + V+ + P++++ L + Q + G
Sbjct: 88 HIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRI--PRIIKKLSQQKIQQMSCG 145
Query: 158 NFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
+ L +G+++T+ +LG + P V+ +LE IP+ Q+ AG
Sbjct: 146 DDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVK------SLEGIPLAQVTAGG 199
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ AL+ SG AV+ G G+LG ++ P ++ + + V ++ G H
Sbjct: 200 SHSFALSL--SG-AVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKV--VYISCGEEHT 254
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDG 330
A++ + G + T+G G G LGH + E P+ V L + +A G +T V G
Sbjct: 255 AILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSG 314
Query: 331 DVYSFGCGESASLG 344
+Y+FGCG+ LG
Sbjct: 315 TLYAFGCGDLGQLG 328
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+G ++ GQLG+G + + P + + + A G T+ + + GQVY+ G +
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + +GT P V +L + A G + LS +G +Y++ GND +LGH
Sbjct: 64 GQLGHSHEGTH----PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RT 243
T + ++ L + Q++ G + LAL +++ G G+LG G+
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALG---DDGQLFTWGQNTHGQLGLGNGFI 176
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ P+ ++ + + L V AG H+ + G V WG G LG +E+ + P
Sbjct: 177 SQSSPQKVKSLEGIPLAQV--TAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPC 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
V+ L K ++++ G+ T ++++ G +++FG G S LGH+++ +
Sbjct: 235 HVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHN 281
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 145/319 (45%), Gaps = 27/319 (8%)
Query: 50 AGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 104
AG H VT + +Y++ G+ GQL HG P+ + GI I QA G
Sbjct: 490 AGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGE 549
Query: 105 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
T++++++G VY+ G D +G E YG V +P +++L + VV A G+
Sbjct: 550 DFTIILTESGDVYSCGSDYYGCLGCEGIYGSN----VLTPIKIDALSKLKVVSIACGDCH 605
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALAC 219
L+ G VYT+ G RLG + ND L+ E +V+I G L
Sbjct: 606 VVALTNIGSVYTWGNGEHGRLGLGNQ-NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTS 664
Query: 220 QPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGA 268
+A + C L + TD+ + + L + + V +A+G
Sbjct: 665 NGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGK 724
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-GDYTTFVVS 327
H+AVV + GR+ T+G +G LG G+ + + P +V L + K + + GD T V +
Sbjct: 725 SHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVVAT 784
Query: 328 EDGDVYSFGCGESASLGHN 346
D ++S+GCGE+ LG N
Sbjct: 785 ADNQIFSWGCGENGRLGLN 803
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWR---------PRPIRSLQG 94
G ++ +TS G + +FG+N +L G T++ P P+R L+
Sbjct: 655 GRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRS 714
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQ 153
RI+ A+G + ++ + G++ FG ++FGE G ++ P LV L N V
Sbjct: 715 YRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSR--NFPSLVSGLLNGKEVTI 772
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPLLGTLENIPVVQIAA 209
G+ FT V + + +++++ G + RLG + + P P+ G+L VV +AA
Sbjct: 773 CNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIFGSLH--KVVSMAA 829
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 316
+ V+AG H AVV + + TW G G L HGN PK V +
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQA 545
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
G+ T +++E GDVYS G LG I V + + + L++
Sbjct: 546 VCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKV 596
>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
Length = 427
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKVACGAEFSMIMDCKGNLYSF 183
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 331 DVYSFG 336
S+G
Sbjct: 354 STISWG 359
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKVACGAEF 170
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ V VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I VA G + ++ G++YSFGC E LGHN +DG+
Sbjct: 158 GQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 198
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ VA GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKVACGAEFSMIMDCKGNL 180
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 286
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 342
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L +F Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402
Query: 163 VLSRE 167
V++R+
Sbjct: 403 VIARD 407
>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
Length = 333
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 17 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 76
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 77 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 134
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 135 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 194
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 195 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 251
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 252 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 304
Query: 331 DVYSFG 336
S+G
Sbjct: 305 STISWG 310
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 63 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 121
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 122 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 180
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 238
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 239 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 289
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES 300
+ + +V D +WG +G LG+G+ + +S
Sbjct: 290 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKS 327
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
V + +G C +L G ++S G G+LGHG + PRLIE L+ + +V
Sbjct: 6 VRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLIEG---LSHEVIV 61
Query: 264 VAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDY 321
AA G H + + G V +G + G LG GN+ ++VP Q + + + I +A G
Sbjct: 62 SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMACGAE 120
Query: 322 TTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ ++ G++YSFGC E LGHN +DG+
Sbjct: 121 FSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 149
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 20 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 78
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 79 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 131
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 132 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 191
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 192 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 237
>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
Length = 427
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 331 DVYSFG 336
S+G
Sbjct: 354 STISWG 359
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVA 395
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 198
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 286
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 342
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVAMGYSHSL 402
Query: 163 VLSRE 167
V++R+
Sbjct: 403 VIARD 407
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 25/302 (8%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ +T KG V++ G NSSGQLG E + P + + AAG +
Sbjct: 69 GGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPD-PCVHIAAGRYHSAA 127
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+ +G+ Y +G++S G+ G + + +PQ +ESL + + A+G + L+ G+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQ 187
Query: 170 VYTFSWGND--ARLGH---------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
V SWG + LGH + N+ P ++ LE + + ++AG L+ A
Sbjct: 188 V--LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPR-IIHCLEKLQIRSVSAG---LVHSA 241
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
C +YS G G +LG G+ D P I ++ ++ G +H + QDG
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS----SISCGGYHTGAITQDG 297
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+ TWG +GCLG G S P +++L + ++ G T +S DG ++S+G G
Sbjct: 298 DIYTWGSNEHGCLGSGF-RASSKPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355
Query: 339 ES 340
S
Sbjct: 356 GS 357
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 107
AG HS A+TS G Y +G NS GQLG G + P+ + SL G+R+ A G +
Sbjct: 120 AGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHS 179
Query: 108 MLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ +++ GQV ++G + FG +G + T T P+++ L+ + + + G
Sbjct: 180 LGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT-PRIIHCLEKLQIRSVSAGLV 238
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
+A G +Y+F G+ +LG + +P P + ++P V + Y
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP----IPDLPRVSSISCGGYHTGAIT 294
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
Q +Y+ G G LG G R K RL + + ++ G H A + DG
Sbjct: 295 QDG--DIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSE---ISCGWKHTAAI-SDGY 348
Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ +WGW G YG LG G + P ++ + + A+HV+ G T +
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408
Query: 328 EDGDV 332
E+ ++
Sbjct: 409 EEIEI 413
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 19/288 (6%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG + ++ P R+L+ + G T++++D G+V+A G +S G+
Sbjct: 33 WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
++ + P V + V A G + +A ++ G Y + ++ +LG
Sbjct: 93 LGVPLK-RESSFDPVEVHGFPDP-CVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150
Query: 187 PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----- 240
V P + +L + + +A G + L LA +G V S G G LGHG
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ETGQ-VLSWGTNRFGCLGHGEMTGF 207
Query: 241 ----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
T+E PR+I + L ++ V+AG H+A G + ++G G LG GN
Sbjct: 208 FDFFKDTNEYTPRIIHCLEKLQIRS--VSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN 265
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P + L V +I + G Y T +++DGD+Y++G E LG
Sbjct: 266 NDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGSNEHGCLG 311
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 166 REGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+ G+ + WGN RLG + EP L LE+ ++ G + L L +
Sbjct: 24 KAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDKGR- 81
Query: 224 MAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
V++ G G+LG R P + F P V +AAG +H+A + G
Sbjct: 82 --VFATGLNSSGQLGVPLKRESSFDPVEVHGFP----DPCVHIAAGRYHSAAITSSGETY 135
Query: 282 TWGWGRYGCLGHGNEECESV---PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
WG G LG G + +SV P+ +++L ++ +A G + ++E G V S+G
Sbjct: 136 VWGRNSEGQLGLG-KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTN 194
Query: 339 ESASLGHNAI 348
LGH +
Sbjct: 195 RFGCLGHGEM 204
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 146 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 205
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 206 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 263
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 264 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 323
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 324 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 380
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 381 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 433
Query: 331 DVYSFG 336
S+G
Sbjct: 434 STISWG 439
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 192 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 250
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 251 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 309
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 310 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 367
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 368 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 418
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 419 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 475
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 476 MGYSHSLVIARD 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 124 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 181
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 182 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 237
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 238 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 278
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 149 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 207
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 208 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 260
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 320
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 321 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 366
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 369 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 422
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 423 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 482
Query: 163 VLSRE 167
V++R+
Sbjct: 483 VIARD 487
>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
Length = 523
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 86 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 146 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 205
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 263
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 264 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 323
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 324 QILPVPNVVVRDVACGANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 381 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 434
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 435 SLACGK-SSIIVAADESTISWG 455
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 208 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 266
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 267 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 325
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 326 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 383
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 384 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 434
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 435 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 491
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 492 MGYSHSLVIARD 503
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 140 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 197
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 294
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 382
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 375 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 423
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 424 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 483
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 484 GIFSEQVAMGYSHSLVIARD 503
>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
Length = 488
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 127 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 186
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 187 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 244
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 245 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 304
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 305 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 361
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 362 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 414
Query: 331 DVYSFG 336
S+G
Sbjct: 415 STISWG 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 173 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 231
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 232 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 290
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 291 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 348
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 349 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 399
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 400 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 456
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 457 MGYSHSLVIARD 468
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 105 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 162
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 163 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 218
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 219 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 259
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 130 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 188
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 189 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 241
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 242 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 301
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 302 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 347
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 350 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 403
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 404 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 463
Query: 163 VLSRE 167
V++R+
Sbjct: 464 VIARD 468
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 9/305 (2%)
Query: 55 SIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLIS 111
++ +T+ G +V++ G ++GQLG G +E PR + S++ I I I +G + +S
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALS 1545
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+V+++G+ G+ +G + T + P+ +E + G +A + G +Y
Sbjct: 1546 SDGEVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELY 1603
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
T+ G RLGH + ++P + L+ V+ +A G L C + V+S G
Sbjct: 1604 TWGKGRYGRLGHGDSDDQLKPKQV-EALQFFFVLDVACGSGDAQTL-CITNDDNVWSWGD 1661
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G GKLG G K P +IE + V V G+ + + + G + TWG G Y L
Sbjct: 1662 GDYGKLGRGGSDGCKVPMIIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRL 1719
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
GHG EE P +V AL + ++ G V +++G+VY +G + LG I
Sbjct: 1720 GHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIAR 1779
Query: 352 QVCSL 356
Q +L
Sbjct: 1780 QTPTL 1784
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 9/297 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAA--AGAGRT 107
G + +T+KG +YS G +S G+LG G T PR + L + + + + +G
Sbjct: 599 GSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHV 658
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
M ++ G +++G G+ +G + P L+E+ V + G+ +A +
Sbjct: 659 MALTSDGLAFSWGDGENGQLGHG--NLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN 716
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+YT+ G+ RLGH E ++P + L VVQ++ G C V+
Sbjct: 717 KYLYTWGLGDFGRLGHGDEETILQPKFVTHFL-GYNVVQVSCG-SRDAQTVCITDDDKVW 774
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
S G G GKLG G P +EQ + LQ + GA + + G V TWG G
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGKGD 832
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ LGHG + PK+V+ L I +A G V++DG+V+S+G + LG
Sbjct: 833 FYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A+TS G+ +S+G +GQLGHG +P I + G + + G+ +
Sbjct: 653 SGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAA 712
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 167
I + +Y +G FG +G + T + P+ V VVQ + G + T ++ +
Sbjct: 713 IVENKYLYTWGLGDFGRLGHGDEET--ILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDD 770
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+V+++ G+ +LG + P + L + + +I G + +AL +G V+
Sbjct: 771 DKVWSWGDGDFGKLGRGGSERCLIPVE-VEQLRGLQICKILCGAQFTVALT--KTG-TVW 826
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P+L+E + + +A GA H V QDG V +WG
Sbjct: 827 TWGKGDFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGEVFSWGDND 884
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G LG G + + VP ++ L++ + +VA G
Sbjct: 885 HGQLGTGETDVKKVPNLITGLHNHRIKYVACG 916
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 10/291 (3%)
Query: 59 TSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
T+K V V+ +G N QLG + P L ++ A G+ T I++ G++Y
Sbjct: 554 TNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLY 613
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFS 174
+ G+ SFG+ G T VTSP+LV L + V + ++ GN A L+ +G +++
Sbjct: 614 SCGESSFGKLGIG-DITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMA-LTSDGLAFSWG 671
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
G + +LGH + +PH + + I V I+ G + A+ +Y+ G G
Sbjct: 672 DGENGQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIV---ENKYLYTWGLGDF 727
Query: 235 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 294
G+LGHG P+ + F N+ V + + D +V +WG G +G LG G
Sbjct: 728 GRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRG 787
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
E +P V+ L ++ + G T +++ G V+++G G+ LGH
Sbjct: 788 GSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGH 838
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
E C + + AG HS A+ G +Y++G G+LGHG ++++ +P+ + +LQ +
Sbjct: 1576 EFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFV 1635
Query: 98 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ A G+G +T+ I++ V+++G +G+ G G+ P ++E L +V+
Sbjct: 1636 LDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG--GSDGCKVPMIIEDLSGKGIVKVE 1693
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G+ F+ L++ G +YT+ G+ RLGH TE + P ++ L N V I+ G +
Sbjct: 1694 CGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPM-MVTALFNKIVTSISCGSLH-- 1750
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ C G VY G G+LG G+ + P L LLN + ++ G+ H
Sbjct: 1751 CVVCTDEG-EVYCWGDNDEGQLGDGTIIARQTPTL--NTFLLNKKIDRISCGSAHT 1803
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 10/277 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H +A++S G V+S+G G+LGHG + +P+ I G I AG +
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAA 1595
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
I G++Y +GK +G +G +L P+ VE+L+ FV+ A G+ T ++ +
Sbjct: 1596 IGLNGELYTWGKGRYGRLGHGDSDDQL--KPKQVEALQFFFVLDVACGSGDAQTLCITND 1653
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+++ G+ +LG P ++ L +V++ G + +AL +Y
Sbjct: 1654 DNVWSWGDGDYGKLGRGGSDGCKVPM-IIEDLSGKGIVKVECGSQFSMALT---KYGVLY 1709
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G +LGHG+ + P ++ L N ++ G+ H V +G V WG
Sbjct: 1710 TWGKGDYYRLGHGTEEHVRRPMMVT--ALFNKIVTSISCGSLHCVVCTDEGEVYCWGDND 1767
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G LG G P + L + K ++ G T
Sbjct: 1768 EGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTI 1804
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ + G ++A+T G V+++G +LGHGT +P+ + L+G +I A GA
Sbjct: 808 KILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALH 867
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++ G+V+++G + G+ G K V P L+ L N + A G+
Sbjct: 868 CLAVTQDGEVFSWGDNDHGQLGTGETDVKKV--PNLITGLHNHRIKYVACGS 917
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
G H +AVT G V+S+G N GQLG G T+ + P I L RI A G+ ++
Sbjct: 863 VGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSI 921
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 23/292 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G HS+AV KG V+++G+ S GQLG G E + P+ I++L GI+IIQ + G ++
Sbjct: 105 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLA 164
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 165 LSEDGQVFSWGKNSHGQLGLGKE-VPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 223
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPH-PL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+F WG+++ +L V+ + PL +G L+ + VV I+ G + L A
Sbjct: 224 --SFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLT---QNGA 278
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
VY+ G G+LGH + +++ P+ +E+ L Q + G++H A V G+V ++G
Sbjct: 279 VYTFGANSSGQLGHSA--EQRGPQCVERIDGLVSQ---IDCGSYHTLAYVYTTGQVVSFG 333
Query: 285 WGRYGCLGHGNEEC----ESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDG 330
G + E + ++ A L D++ H+ G + FV + G
Sbjct: 334 HGPSCTSNSTHSETVTDNADISCLISADDLVDIQVKHIFAGTHANFVTTYQG 385
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+P I++ + +R+ + G ++ + G+V+A+G S G+ G + T PQ ++
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFT-PQKIK 145
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLEN 201
+L I ++Q + G + + LS +G+V FSWG ++ +LG E P+ P + +LE
Sbjct: 146 ALAGIKIIQVSCGYYHSLALSEDGQV--FSWGKNSHGQLGLGKEVPSQTSPQ-RVRSLEG 202
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQ 260
IP+ Q+AAG + AL+ SG + + G G+L G++ + + + L L
Sbjct: 203 IPLAQVAAGGAHSFALSL--SGTS-FGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLG 259
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
V ++ G+ H AV+ Q+G V T+G G LGH E + P+ V+ ++ + + + G
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAE--QRGPQCVERIDGLVS-QIDCGS 316
Query: 321 YTTFV-VSEDGDVYSFGCGESAS 342
Y T V G V SFG G S +
Sbjct: 317 YHTLAYVYTTGQVVSFGHGPSCT 339
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
Query: 62 GVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G ++++G NS GQLG G P+ + L G+ ++Q +AG +M +S G VY++G
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K+ FG + G+ T+ SP L+ +L + V A G TA+L+++G V+TF G +
Sbjct: 973 KNDFG--QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
LGH + +++ P + L N V QIA G + LA + V++ G G G+LG+
Sbjct: 1031 LGHSSTRDELRPCLVTELLGN-RVTQIACGRWHTLAYVSELG--KVFAFGSGKNGQLGN 1086
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 154 QVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGA 213
Query: 106 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S +G + +G +S G+ A G + P V +LK + VV + G+ TAVL
Sbjct: 214 HSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVL 273
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
++ G VYTF + +LGH E
Sbjct: 274 TQNGAVYTFGANSSGQLGHSAE 295
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS+A++ G VYS+G N GQLG G TE + P +R+L ++ A G
Sbjct: 951 QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSH 1010
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T L++ G V+ FG +G + G T+ P LV L V Q A G + T A +S
Sbjct: 1011 TALLTQDGLVFTFGAGKYG--QLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVS 1068
Query: 166 REGRVYTFSWGNDARLGH---HTEPN 188
G+V+ F G + +LG+ H +PN
Sbjct: 1069 ELGKVFAFGSGKNGQLGNCGTHNQPN 1094
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 12/178 (6%)
Query: 173 FSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
F+WG ++ +LG P+ P ++ L +P+VQI+AG + +AL+ + VYS
Sbjct: 916 FAWGQNSHGQLGLGRIFPSSPTPQ-IVEHLAGVPLVQISAGEAHSMALSMTGN---VYSW 971
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G + P L+ + L+ Q V +A G H A++ QDG V T+G G+Y
Sbjct: 972 GKNDFGQLGLGHTESKDSPSLL---RALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKY 1028
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGH 345
G LGH + E P +V L + +A G + T VSE G V++FG G++ LG+
Sbjct: 1029 GQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGN 1086
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 196
+ P+ +++ + + V + G + + +GRV+ + G++ +LG + P +
Sbjct: 86 SKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKI- 144
Query: 197 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIE 252
L I ++Q++ GY + LAL+ V+S G G+LG G S+T + R +E
Sbjct: 145 KALAGIKIIQVSCGYYHSLALS---EDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLE 201
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALN 309
L VAAG H+ + G WG G L + P V AL
Sbjct: 202 GIPLAQ-----VAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALK 256
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
+ ++++ G T V++++G VY+FG S LGH+A G C
Sbjct: 257 TLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAEQRGPQC 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
P+++E + L V ++AG H+ + G V +WG +G LG G+ E + P +++A
Sbjct: 938 PQIVEHLAGVPL--VQISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRA 995
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
L+ K +A G T ++++DG V++FG G+ LGH++ D
Sbjct: 996 LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTRD 1038
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 9/135 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE---EEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +GSNS+GQL T+ + ++P + +L+ + ++ +
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISC 265
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
G+ T +++ G VY FG +S G+ + + PQ VE + + V Q G++ T
Sbjct: 266 GSEHTAVLTQNGAVYTFGANSSGQLGHSAEQ----RGPQCVERIDGL-VSQIDCGSYHTL 320
Query: 162 AVLSREGRVYTFSWG 176
A + G+V +F G
Sbjct: 321 AYVYTTGQVVSFGHG 335
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 36/316 (11%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGT------------KLVTSPQLVESLKNIFVVQAA 155
+ + + G+ YA+G + +G+ Q + +T PQ + V Q
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQ--RCAPRLCVRQLT 161
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 211
G + VL+ EG V+T+ G P D++ P + G LEN V IA G
Sbjct: 162 AGGTHSVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGA 210
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
+ LAL V++ G G+LG G P ++ L L V +AAG WH+
Sbjct: 211 FHNLALVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHS 265
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ DG V WG G +G LG G+++ + P+ V L + V+ G + + G
Sbjct: 266 MALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISG 325
Query: 331 DVYSFGCGESASLGHN 346
++SFG G+ LG++
Sbjct: 326 RMFSFGRGDHGRLGYS 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 29/301 (9%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ S+ V ++G+ GQLG G +++ + +L+ ++ AG+ ++ I + G+++
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G + G + + TK ++P V++L N+ +VQAAIG + + EGR T++WG
Sbjct: 61 TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR--TYAWGG 117
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+ G E + G + + C Q + +SV
Sbjct: 118 N-EYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSV-------- 168
Query: 238 GHGSRTDEKH---------PRLIEQF----QLLNLQPV-VVAAGAWHAAVVGQDGRVCTW 283
T+E H P I+Q ++ L+ V ++A GA+H + Q G V W
Sbjct: 169 ---VLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAW 225
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G YG LG G+ + S P V+ L + + +A G + + ++ DG VY +G GE L
Sbjct: 226 GNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRL 285
Query: 344 G 344
G
Sbjct: 286 G 286
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN IA G H++A+ G V+++G+N GQLG G T+ P P++ L G+ ++ AA
Sbjct: 201 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 260
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G +M ++ G VY +G+ G +G + +K++ PQ V L VVQ + G +
Sbjct: 261 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 318
Query: 162 AVLSREGRVYTFSWGNDARLGH 183
+ GR+++F G+ RLG+
Sbjct: 319 VAATISGRMFSFGRGDHGRLGY 340
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG GN + + VV AL D + V G + + EDG ++++G +
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
Length = 427
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 331 DVYSFG 336
S+G
Sbjct: 354 STISWG 359
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 395
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 198
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 286
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 342
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 402
Query: 163 VLSRE 167
V++R+
Sbjct: 403 VIARD 407
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 18/281 (6%)
Query: 73 GQLGHGTTEEEWRPRPIRSLQGIRI---IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 129
G+LG G + + RP+ IR +I + + G T+ I+ G++Y++G +G+ +
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503
Query: 130 GVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 188
G T+ SP+L+ ++ V Q A+G +A ++ EG +YT+ G+ RLGH +
Sbjct: 504 GNHVTQ--KSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561
Query: 189 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 248
P L+ + + V + + +++ V+S G G GKLGHG + P
Sbjct: 562 RSIP-TLVKDITGVGSVSCGSSFTVVIS----QDATTVWSFGAGDNGKLGHGDTSRVYRP 616
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQA 307
++I Q L ++ V A+ + + + G+V WG G CLG+G + VPK +
Sbjct: 617 KVISNLQGLLIRKVCCASQS--SLALTSIGQVFVWGSG--PCLGYGQADATFLVPKRLDE 672
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGHN 346
D++ I +A GD ++ D DVYS+G S LG+N
Sbjct: 673 FQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNN 713
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 11/298 (3%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA---GRT 107
G + + G V + G S G+LG G +++ R RPI +LQG + + A G +
Sbjct: 3445 GHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHS 3504
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +++ G+V+++G +G+ +G ++ P+ +E+L+ V+ A G+ +A+++ +
Sbjct: 3505 LALTETGEVFSWGDGDYGKLGHG--NSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVD 3562
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G+++TF + RLG N P + L+ I V IA G + + + +V+
Sbjct: 3563 GKLFTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRE--SVW 3619
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G G+LG G T + P+ ++ F LN++ + GA + ++G+V + G R
Sbjct: 3620 TFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKK--ICCGARFTLALTKEGKVYSCGHNR 3677
Query: 288 -YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G + + P+ V AL++ +A G ++++GDV+S+G LG
Sbjct: 3678 CNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLG 3735
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 12/281 (4%)
Query: 31 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
LR + A + E + + GHS+A+T G V+S+G G+LGHG +E + RPR I
Sbjct: 3480 LRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIE 3539
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+L+G ++ A G + +++ G+++ FG G G K + P V +L+ I
Sbjct: 3540 ALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKL--PAQVTALQPIM 3597
Query: 151 VVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
V A G T V++ + V+TF G +LG + P + + + +I
Sbjct: 3598 VELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQ-YVDAFSKLNIKKICC 3656
Query: 210 GYCYLLALACQPSGMAVYSVGCG-LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAG 267
G + LAL + VYS G G ++ + +P +Q L+ Q + +AAG
Sbjct: 3657 GARFTLALTKEGK---VYSCGHNRCNGIFEVDTQHADYYP---QQVMALSEQFIEDIAAG 3710
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
HA + ++G V +WG G LG G + P ++ +L
Sbjct: 3711 YEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSL 3751
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS VT G +++FG++ G+LG G T + P + +LQ I + A GA T+++
Sbjct: 3552 GHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVV 3611
Query: 111 -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D V+ FG+ +G+ G K+ +PQ V++ + + + G FT L++EG+
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGK 3669
Query: 170 VYTFSWGN-DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY+ + T+ D P ++ E + IAAGY + LAL + V+S
Sbjct: 3670 VYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQF-IEDIAAGYEHALALTKEGD---VWS 3725
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
G G+LG G ++ P LI Q ++ ++AG H+A
Sbjct: 3726 WGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQ--ISAGHNHSA 3767
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 27/296 (9%)
Query: 34 LLAGEACCRRENSQAIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-S 91
L+ E C+ +N + G GH++A+ S G +YS+G G+LGHG + P+ I
Sbjct: 459 LIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGP 518
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
+QG + Q A G + I+ G +Y +G +G +G ++ + P LV+ + +
Sbjct: 519 MQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSI--PTLVKDITGVGS 576
Query: 152 VQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 210
V + G+ FT V+S++ V++F G++ +LGH P ++ L+ + + ++
Sbjct: 577 V--SCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPK-VISNLQGLLIRKVCCA 633
Query: 211 YCYLLALACQPSGMAVYSVG----CGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVV 264
S +A+ S+G G G LG+G + D P+ +++FQ +LQ + +
Sbjct: 634 ---------SQSSLALTSIGQVFVWGSGPCLGYG-QADATFLVPKRLDEFQ--DLQIIDI 681
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATG 319
A G H + D V +WG G G GN +P+ V ++ ++ G
Sbjct: 682 AVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVG 737
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 126/278 (45%), Gaps = 22/278 (7%)
Query: 74 QLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQ 132
QL T E E P P + II+ + +S + Y +G G+ AE G
Sbjct: 3368 QLITSTKENEILP-PWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESG-- 3424
Query: 133 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
+LV P L S Q G+ T V+ +G V G+ RLG +
Sbjct: 3425 --RLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRL 3480
Query: 193 HPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
P+ L+ V ++A G+ +LA +G V+S G G GKLGHG+ ++
Sbjct: 3481 RPITA-LQGFVVTELATSTGLEGH----SLALTETG-EVFSWGDGDYGKLGHGNSERQRR 3534
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
PR IE + ++ + VA G H+A+V DG++ T+G G LG GN + +P V A
Sbjct: 3535 PRQIEALRGEDV--LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA 3592
Query: 308 LNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLG 344
L + +A G T VV+ D + V++FG GE LG
Sbjct: 3593 LQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLG 3630
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 17/173 (9%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
V+SFG+ +G+LGHG T +RP+ I +LQG+ I + + ++ ++ GQV+ +G
Sbjct: 593 TVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSG 652
Query: 123 S---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+G+A+ T LV P+ ++ +++ ++ A+G+ L+ + VY SWGN+A
Sbjct: 653 PCLGYGQAD----ATFLV--PKRLDEFQDLQIIDIAVGDNHCLALTCDNDVY--SWGNNA 704
Query: 180 R----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
LG++ P + P + G +N + QI+ G + +A P+ + +
Sbjct: 705 SGQCGLGNNNSPV-LLPRKVTG-FDNHVIYQISVGTSHSIAWTALPTDRCIVT 755
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
AG H++A+T +G V+S+G+++ GQLG G T + P I SLQG I Q +AG
Sbjct: 3709 AGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAG 3762
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 246 KHPRLIEQFQLLNLQPVVVAA---------GAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
+H +L E +L+ LQP + ++ G V+ DG V G G YG LG GN
Sbjct: 3416 RHGQLAESGRLV-LQPTLTSSFSKAKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNS 3474
Query: 297 ECESVPKVVQALNDVKAIHVATG---DYTTFVVSEDGDVYSFGCGESASLGH 345
+ + + AL +AT + + ++E G+V+S+G G+ LGH
Sbjct: 3475 DDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGH 3526
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESAS 342
G YG LG G+ ++ PK+++ ++ K ++ + D T ++ DG +YS+G G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500
Query: 343 LGH 345
LGH
Sbjct: 501 LGH 503
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 23/283 (8%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR ++S Q + + A G +++ GQV+++G+++ G G + + V+ P++++S
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGR--LGHKTSDSVSDPKIIDS 280
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 201
L + V A G +T +S G +Y WG LG + + + PH L+ T +
Sbjct: 281 LASTPVKTIAFGAKYTCAVSVSGELY--EWGEGIHSLGFGKNQCQRSPWFPHKLISTSDG 338
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
I V++IA G + ++ S +Y+ G G G LGHG HP+ +E L +
Sbjct: 339 ISVLKIACGQWHTAIIS---SLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES--LRGSRA 393
Query: 262 VVVAAGAWHAAVVGQD----------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
VA G WH A + + G++ TWG G LGH N++ + VP V++L D
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC 453
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVC 354
V+ G T V++ G V++ G E LG++ + +C
Sbjct: 454 DFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSIC 496
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 18/312 (5%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
N Q+IA G H+ VT +G V+S+G + G+LGH T++ P+ I SL + A G
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFG 292
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP----QLVESLKNIFVVQAAIGNF 159
A T +S +G++Y +G+ G G + SP +L+ + I V++ A G +
Sbjct: 293 AKYTCAVSVSGELYEWGE---GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQW 349
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA--- 216
TA++S G++YT+ +G LGH + V P + +L +A G + A
Sbjct: 350 HTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKE-VESLRGSRAKSVACGPWHTAAIVE 408
Query: 217 ----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
L G +++ G GGKLGH ++ + P +E L++ V+ G A
Sbjct: 409 TSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVE--SLIDCDFTQVSCGMSLTA 466
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
V+ G V T G +G LG+ + S+ V L ++ G V++ +G V
Sbjct: 467 VLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKV 526
Query: 333 YSFGCGESASLG 344
+++G G LG
Sbjct: 527 FTWGKGTEGQLG 538
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 87 RPIRSLQGI---RIIQAAA---GAGRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTS 139
R IRS + I RIIQ G ++ +G D G +++G ++
Sbjct: 164 RDIRSAETIKDQRIIQMPKLKQSEGSNAATDSLKDIFVWG-DVLGRMSDHGHVPATNISL 222
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLG 197
P+L++S + + V A G A+++++G+V FSWG N RLGH T + +P ++
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQV--FSWGEENGGRLGHKTSDSVSDPK-IID 279
Query: 198 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQ 253
+L + PV IA G Y A++ SG +Y G G+ LG G ++ P +LI
Sbjct: 280 SLASTPVKTIAFGAKYTCAVSV--SG-ELYEWGEGIHS-LGFGKNQCQRSPWFPHKLIST 335
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+++ + +A G WH A++ G++ T+G+G +G LGHG+ PK V++L +A
Sbjct: 336 SDGISV--LKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRA 393
Query: 314 IHVATGDYTTFVVSED----------GDVYSFGCGESASLGH 345
VA G + T + E G ++++G LGH
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGH 435
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 11/297 (3%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E QA +G HS+ + S G V+S G N GQLG + + IR+L+ + + + G
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSCG 83
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
++ + G+V+A+G S G+ G + T L+ P +++L +I + Q + G++ +
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PMKIKTLNDIKIKQVSCGHYHSL 141
Query: 163 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
LS G+V+++ +D +LG + P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 142 ALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQ-RVRSLDGIPLAQVAAGGAHSFALSL-- 198
Query: 222 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 280
SG + + G G+L H + + + L NL + ++ G H V+ Q+G+V
Sbjct: 199 SGTS-FGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKV 257
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 336
T+G YG LGH +S P++V+ ++ + + + G Y T V G V SFG
Sbjct: 258 FTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFG 313
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 21/268 (7%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L G+ + QAA+G ++L+ GQV++ G + G + G +G + + +L+ + V
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDN--GRGQLGQRGAPCSAQLKRIRALETLHV 77
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPL-LGTLENIPVVQIA 208
+ G + + +GRV+ + G++ +LG E N + P+ + TL +I + Q++
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI---PMKIKTLNDIKIKQVS 134
Query: 209 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAG 267
G+ + LAL+ G V+S G G+LG G + + P+ + + L VAAG
Sbjct: 135 CGHYHSLALS---EGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPL--AQVAAG 189
Query: 268 AWHAAVVGQDGRVCTWGWGRYGC----LGHGNEECESV-PKVVQALNDVKAIHVATGDYT 322
H+ + G ++GWGR L N +S P + AL ++ I+++ G
Sbjct: 190 GAHSFALSLSG--TSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEH 247
Query: 323 TFVVSEDGDVYSFGCGESASLGHNAIAD 350
T V++++G V++FG LGH+ A+
Sbjct: 248 TVVLTQNGKVFTFGDNTYGQLGHSPTAE 275
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S + + Q G L++ G+V+ +G+DS G +G + K P LVES
Sbjct: 252 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVES 309
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 201
L V A G + + +S G ++T WG+ LGH T+ + P + G LE
Sbjct: 310 LAITNVTFVACGEYHSCAVSTSGDLFT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 367
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 260
+ VV +A G + ALA S +++ G G G LGHG+R +P+ + QLL+ +
Sbjct: 368 LQVVAVACG-TWHSALAT--SNGKLFTFGDGRFGVLGHGNRASVAYPK---EVQLLSGYK 421
Query: 261 PVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ VA G WH+A + R+ TWG G LGH N+E P V A+ +
Sbjct: 422 AIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE 481
Query: 311 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
VA G T ++ G V+S G LG N +DG+V L+
Sbjct: 482 YNFHQVACGYTMTVALTASGHVFSMGGTTYGQLG-NPNSDGKVPILV 527
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 21/286 (7%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G HS AV++ G ++++G ++ +G LGHGT W P+ + L+G++++ A G +
Sbjct: 321 GEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHS 380
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
L + G+++ FG FG +G + + V P+ V+ L ++ A G + +A +
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACGVWHSAAIIDV 438
Query: 165 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 217
+ R++T+ G+ RLGH + +EP + E Q+A GY +AL
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 497
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
SG V+S+G G+LG+ + +D K P L+ +L+ ++ GA H AV+
Sbjct: 498 TA--SGH-VFSMGGTTYGQLGNPN-SDGKVPILVRD-KLVGEFVEEISCGANHVAVLTSR 552
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ TWG G G LGHG+ + + P +V+AL D +++ G T
Sbjct: 553 SELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFT 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 20/246 (8%)
Query: 114 GQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+V+A G D G T ++T P+ +ES + V Q G+ A+++R+G V+
Sbjct: 225 GEVWADGNSFDGLGSQLQAFCKTDVLT-PKPLESDVVLDVHQIGPGDRHIALVTRQGEVF 283
Query: 172 TFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
T WG D+ RLGH E + PH L+ +L V +A G + A++ + +
Sbjct: 284 T--WGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCAVSTS-GDLFTWGD 339
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G LGHG+ P+ + L LQ V VA G WH+A+ +G++ T+G GR+G
Sbjct: 340 GTHGAGLLGHGTDVSYWIPKRVSG-PLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFG 398
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD----------VYSFGCGE 339
LGHGN + PK VQ L+ KAI VA G + + + + D ++++G G+
Sbjct: 399 VLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGD 458
Query: 340 SASLGH 345
LGH
Sbjct: 459 QYRLGH 464
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 139/323 (43%), Gaps = 25/323 (7%)
Query: 51 GPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
GPG H VT +G V+++G +S G+LGHG ++ RP + SL + A G +
Sbjct: 267 GPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSC 326
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNFFT 161
+S +G ++ +G + G G GT K V+ P L+ + VV A G + +
Sbjct: 327 AVSTSGDLFTWGDGTHGAGLLG-HGTDVSYWIPKRVSGP-----LEGLQVVAVACGTWHS 380
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL---- 217
A+ + G+++TF G LGH + P + L +++A G + A+
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRASVAYPKE-VQLLSGYKAIKVACGVWHSAAIIDVM 439
Query: 218 ---ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
+ S +++ G G +LGH ++ P + N VA G +
Sbjct: 440 DLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQ--VACGYTMTVAL 497
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V + G YG LG+ N + + V L ++ G V++ ++Y+
Sbjct: 498 TASGHVFSMGGTTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYT 557
Query: 335 FGCGESASLGHNAIADGQVCSLL 357
+G G + LGH D + +L+
Sbjct: 558 WGRGANGRLGHGDTDDKKSPTLV 580
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 105
Q G ++A+T+ G V+S G + GQLG+ ++ + P +R L G + + + GA
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGKV-PILVRDKLVGEFVEEISCGAN 544
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+++ ++Y +G+ + G +G K SP LVE+LK+ V + G+ FT+ +
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDK--KSPTLVEALKDRHVKNISCGSTFTSCI 601
>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
AltName: Full=Telophase disk protein of 60 kDa
gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
Length = 522
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 85 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 434 SLACGK-SSIIVAADESTISWG 454
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 491 MGYSHSLVIARD 502
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 293
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 381
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 374 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 422
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 483 GIFSEQVAMGYSHSLVIARD 502
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G T P+ + L G+ + Q +AG
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ FG + G+ T+ SP L+E+L N V A G +A+L+
Sbjct: 201 HSMALSMSGNIYSWGKNEFG--QLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFG--K 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIP 338
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + E +Y + K + S +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQE 136
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG T P+ P ++ L +
Sbjct: 137 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAGV 190
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 191 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 305
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 TLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 81 EEEWRPRPIRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
E ++ + +RS LQ +IIQ G ++ +S G+++A+G++ G+ G +
Sbjct: 120 EYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPST 178
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHP 194
T+PQ+VE L + + Q + G + LS G +Y SWG + +LG HTE D
Sbjct: 179 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKDSPS-- 234
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L+N V +A G + AL Q G+ +++ G G G+LGH S +E P L+ +
Sbjct: 235 LIEALDNQKVEFLACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE- 290
Query: 255 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
L+ + +A G WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 291 -LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
+P+ ++ KN+ + G +LS +G+ + + + H +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS-----MKHLRSESI-------- 133
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLL 257
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++E L
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEH--LA 188
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ ++AG H+ + G + +WG +G LG G+ E + P +++AL++ K +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G + ++++DG +++FG G+ LGHN+ +
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN 281
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G +YS+G N GQLG G TE + P I +L ++ A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
+ L++ G ++ FG G + G T+ P LV L V Q A G + T A +
Sbjct: 253 HSALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G D +LG+ + + P P+
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAY 309
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P V S
Sbjct: 310 VSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSS 345
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 25/300 (8%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 108
+G H++ ++ G V+S GSN +G+LG G E + P+ + IIQ +AG +M
Sbjct: 54 SGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSM 113
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+SD G+++A+G +S G + + G L + +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
GRV+ + +D R+ H P +VE +IP+VQI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------IFISIPIVQISAGNLFTMALTA--SG-TLF 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 286
+ G G+LG + D +P + N+ VV V G H+ + +GRV + G
Sbjct: 219 AWGKNEEGQLGDFTNKDVVNPCAVP-----NINSVVAVECGDSHSIALTHEGRVFSCGSD 273
Query: 287 RYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 274 SFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH 332
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLP--ETVQVACGAS 161
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++ G+V+ +G+ S G + SP VE +I +VQ + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVEIFISIPIVQISAGNLFTMALT 212
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 224
G ++ + + +LG T + V P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGKNEEGQLGDFTNKDVVNP----CAVPNINSVVAVECGDSHSIALTHEGR-- 266
Query: 225 AVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V+S G G+LG G ++ R I ++L +A G H VV +G++ T+
Sbjct: 267 -VFSCGSDSFGQLGCGQPNRSQNCMRGIT--EMLGSHVTRIACGRCHTIVVA-NGKMHTF 322
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
G G LGHGN + P+V+ ++ +V ++
Sbjct: 323 GLNSNGQLGHGNTRNQITPRVIDSVENVASV 353
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 33/294 (11%)
Query: 64 VYSFGSNSSGQLGH--GTTEEEWR----PR-----PIRSLQGIRIIQAAAGAGRTMLISD 112
+Y FG GQLG + E + + PR P R G+ + A+G T+ +SD
Sbjct: 6 LYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQ-NGVIVKSIASGERHTLFLSD 64
Query: 113 AGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+V++ G + GE GV+ P + S + ++Q + G + +S +GR+
Sbjct: 65 DGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRL- 121
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVG 230
F+WG+++ G D+ + ++P VQ+A G + ++L G V+ G
Sbjct: 122 -FAWGSNSH-GQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLN---GGGRVFIWG 176
Query: 231 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G++ H P +E F +++ V ++AG + G + WG G
Sbjct: 177 QQSDGRIRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQ 227
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG + P V +N V A V GD + ++ +G V+S G LG
Sbjct: 228 LGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLG 279
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G T P+ + L G+ + Q +AG
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ FG + G+ T+ SP L+E+L N V A G +A+L+
Sbjct: 201 HSMALSMSGNIYSWGKNEFG--QLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFG--K 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIP 338
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + E +Y + K + S +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQE 136
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG T P+ P ++ L +
Sbjct: 137 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAGV 190
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 191 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 305
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 TLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 81 EEEWRPRPIRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
E ++ + +RS LQ +IIQ G ++ +S G+++A+G++ G+ G +
Sbjct: 120 EYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPST 178
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHP 194
T+PQ+VE L + + Q + G + LS G +Y SWG + +LG HTE D
Sbjct: 179 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKDSPS-- 234
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L+N V +A G + AL Q G+ +++ G G G+LGH S +E P L+ +
Sbjct: 235 LIEALDNQKVEFLACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE- 290
Query: 255 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
L+ + +A G WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 291 -LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
+P+ ++ KN+ + G +LS +G+ + + + H +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS-----MKHLRSESI-------- 133
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLL 257
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++E L
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEH--LA 188
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ ++AG H+ + G + +WG +G LG G+ E + P +++AL++ K +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G + ++++DG +++FG G+ LGHN+ +
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN 281
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G +YS+G N GQLG G TE + P I +L ++ A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
+ L++ G ++ FG G + G T+ P LV L V Q A G + T A +
Sbjct: 253 HSALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G D +LG+ + + P P+
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAY 309
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P V S
Sbjct: 310 VSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSS 345
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 29/310 (9%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
+AG +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-------AAIGNFF 160
+ + + G+ YA+G + +G+ Q + + ++I + Q A G
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTH 163
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 216
+ VL+ EG V+T+ G P D++ P + G LEN V IA G + LA
Sbjct: 164 SVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGAFHNLA 212
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L V++ G G+LG G P ++ L L V +AAG WH+ +
Sbjct: 213 LVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHSMALTP 267
Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG G +G LG G+++ + P+ V L + V+ G + + G ++SF
Sbjct: 268 DGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSF 327
Query: 336 GCGESASLGH 345
G G+ LG+
Sbjct: 328 GRGDHGRLGY 337
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ S+ V ++G+ GQLG G +++ + +L+ ++ AG+ ++ I + G+++
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 176
+G + G + + TK ++P V++L N+ +VQAAIG + + EGR T++WG
Sbjct: 61 TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR--TYAWGG 117
Query: 177 ------------------NDARLGHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
++++ H T P P + VV G+ +
Sbjct: 118 NEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWG 177
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
P + SV P ++ + + + +A GA+H + Q
Sbjct: 178 QPWPPGDIKQISV------------------PVRVQGLENVTM----IAVGAFHNLALVQ 215
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V WG YG LG G+ + S P V+ L + + +A G + + ++ DG VY +G
Sbjct: 216 HGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWG 275
Query: 337 CGESASLG 344
GE LG
Sbjct: 276 RGEHGRLG 283
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
EN IA G H++A+ G V+++G+N GQLG G T+ P P++ L G+ ++ AA
Sbjct: 198 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 257
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G +M ++ G VY +G+ G +G + +K++ PQ V L VVQ + G +
Sbjct: 258 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 315
Query: 162 AVLSREGRVYTFSWGNDARLGH 183
+ GR+++F G+ RLG+
Sbjct: 316 VAATISGRMFSFGRGDHGRLGY 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 30/261 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQ----- 99
QA G H +AV +G Y++G N GQ T E++ + + I I Q
Sbjct: 95 QAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPR 154
Query: 100 --AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
AAG ++++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 155 LCVAAGGTHSVVLTEEGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVTMI--AVG 206
Query: 158 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
F L + G V+ +WGN+ +LG P P+ G L + +V IAAG + +
Sbjct: 207 AFHNLALVQHGEVW--AWGNNEYGQLGTGDTQPRSSPVPVKG-LTGLVLVDIAAGGWHSM 263
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAV 273
AL P G AVY G G G+LG G D+K +++ Q LL +PVV V+ G H+
Sbjct: 264 ALT--PDG-AVYGWGRGEHGRLGFG---DDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVA 317
Query: 274 VGQDGRVCTWGWGRYGCLGHG 294
GR+ ++G G +G LG+G
Sbjct: 318 ATISGRMFSFGRGDHGRLGYG 338
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 15 ERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 74
E+Q +Q+ G K++ R + + C R AG HS+ +T +G V+++G
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQRCAPRLC--VAAGGTHSVVLTEEGHVWTWG------ 177
Query: 75 LGHGTTEEEWRPRPIRSL------QGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 127
+ W P I+ + QG+ + A GA + + G+V+A+G + +G+
Sbjct: 178 -------QPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQ- 229
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
G T+ +SP V+ L + +V A G + + L+ +G VY + G RLG +
Sbjct: 230 -LGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDK 288
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
+ + L PVVQ++ G + ++A SG ++S G G G+LG+G H
Sbjct: 289 SSKMLPQKVHLLAGEPVVQVSCGGTH--SVAATISGR-MFSFGRGDHGRLGYGGAVTTGH 345
Query: 248 P 248
P
Sbjct: 346 P 346
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V WG G G LG GN + + VV AL D + V G + + EDG ++++G +
Sbjct: 7 VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66
Query: 340 SASLGH 345
+LGH
Sbjct: 67 RGTLGH 72
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 103
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2715
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2716 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2773
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-------IAAGYCYLLA 216
++ +G+++TF G+ RLG N P + LE + Q +A G + LA
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSYSVACGLNHTLA 2832
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
++ G V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +
Sbjct: 2833 VST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTK 2888
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V T+G R L G + P+ V L V VA G T ++ GDVY++G
Sbjct: 2889 DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 2948
Query: 337 CGESASLG 344
LG
Sbjct: 2949 SNSEGQLG 2956
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 30/250 (12%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2754 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2813
Query: 98 IQA-------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
QA A G T+ +S D V+AFG +G+ G K +SPQ V+ L I
Sbjct: 2814 GQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGI 2871
Query: 150 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENI 202
+ + A G F+ L+++G VYTF G D +G +H P V P+L +
Sbjct: 2872 GIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GV 2923
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
+ +A G + LALA S VY+ G G+LG G + P L+ Q N++
Sbjct: 2924 VIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ- 2979
Query: 263 VVAAGAWHAA 272
++AG H+A
Sbjct: 2980 -ISAGRCHSA 2988
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG ++Q + G + +++
Sbjct: 2717 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 2776
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA-------AIGNFFTAVLS 165
G+++ FG +G G K + P+ V +L+ + QA A G T +S
Sbjct: 2777 DGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGYQIGQAWNKSYSVACGLNHTLAVS 2834
Query: 166 REGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G V+ F G+ +LG P + L I + ++A G + +AL
Sbjct: 2835 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGIKKVACGTQFSVALT---KDG 2890
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
VY+ G L G + P+ + + ++ V V GA H + G V WG
Sbjct: 2891 HVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV--GAEHTLALASTGDVYAWG 2948
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G LG G+ P +V L ++ G
Sbjct: 2949 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAG 2983
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
V+ +G V G G YG LG GN + V V+ AL + T D + ++E
Sbjct: 2666 VIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 2725
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 2726 GEVFSWGDGDYGKLGH 2741
>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
Length = 522
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 85 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 205 VLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 434 SLACGK-SSIIVAADESTISWG 454
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 491 MGYSHSLVIARD 502
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V+AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 197 EG---LSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 293
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGS 222
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 381
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 374 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 422
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 482
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 483 GIFSEQVAMGYSHSLVIARD 502
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 22/314 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ V S G ++++G+N SGQLG+G + P +R L +++ A+AGA ++ +++
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEHSVAVTED 213
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G +++G+ G + V P V + ++ V AA T L +G V+T+
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269
Query: 174 SWGNDARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ LG T + + P P L + N IAAG + LA+ S +S G
Sbjct: 270 GINSSGELGDGTTTHSLLPIQVPNLSGVTN-----IAAGLWHTLAVKKDGS---AWSWGN 321
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ + P L+ + ++ G H + DG WG+ G L
Sbjct: 322 NAYGQLGDGTTLNRLRPVLVAGLTGVR----ALSGGVVHTVALKWDGTAWGWGYNSAGQL 377
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 351
G+G S+P V AL +A+ + G Y T +DG +Y++G +LG
Sbjct: 378 GNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSS 435
Query: 352 QVCSLLFLSIFQYL 365
V + LS ++
Sbjct: 436 SVPVQVPLSGVRWF 449
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 122/258 (47%), Gaps = 20/258 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
A AG HS+AVT G V+++GSN+ GQLG GT R P++ ++ AA R
Sbjct: 199 SASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTL--RAVPVQVPGMSDVVAVAAAGSR 256
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ + G V+ +G +S GE G L+ P V +L + + A + + T + +
Sbjct: 257 TVALKADGTVWTWGINSSGELGDGTTTHSLL--PIQVPNLSGVTNIAAGL--WHTLAVKK 312
Query: 167 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G + SWGN+A +LG T N + P + G V ++ G + +AL +
Sbjct: 313 DGSAW--SWGNNAYGQLGDGTTLNRLRPVLVAGLTG---VRALSGGVVHTVALKWDGT-- 365
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
+ G G+LG+G+ T+ P + Q V + AG +H QDG + WG
Sbjct: 366 -AWGWGYNSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWG 420
Query: 285 WGRYGCLGHGNEECESVP 302
YG LG GN SVP
Sbjct: 421 DNFYGALGTGNTTSSSVP 438
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 16/254 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++A+++ G V ++G N+ GQLG+GTT + P+ + L G+ I +AG+ T+
Sbjct: 556 AGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVA 613
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G + +SP V SL+N VV A G+F T + +G
Sbjct: 614 LKADGTVWAWGSNLYGQLGDGTFTHR--SSPVQVPSLEN--VVSIAAGHFHTVAVKGDGT 669
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++ + +G +LG T N P + G V IAAG + +AL V++
Sbjct: 670 LWVWGYGPQGQLGLGTTTNQSVPVQVSGLGH---AVAIAAGGYHTVALLANGQ---VWTW 723
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG + P L+ L N+ + +AAG + AV+ +DG V +G+ G
Sbjct: 724 GYNSSGQLGDATIIQRYSPVLVP--GLTNV--IALAAGGYTTAVLKRDGTVWAFGYNPNG 779
Query: 290 CLGHGNEECESVPK 303
LG G S P
Sbjct: 780 QLGDGTTTSRSSPT 793
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 139/308 (45%), Gaps = 28/308 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H++AV G +S+G+N+ GQLG GTT RP + L G+R + + G T+
Sbjct: 302 AGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRAL--SGGVVHTVA 359
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G + +G +S G+ G T + P V +L + A G + T ++G
Sbjct: 360 LKWDGTAWGWGYNSAGQLGNGT--TTNSSIPVQVAALTQAVEIDA--GGYHTLARRQDGT 415
Query: 170 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+Y +WG++ LG + P PL G V AGY Y +A + +
Sbjct: 416 LY--AWGDNFYGALGTGNTTSSSVPVQVPLSG------VRWFGAGYYYSVAERKKVNMAQ 467
Query: 226 VYSV---GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
V+++ G G+LG G+ T P + + V A G+ H+ +G G V T
Sbjct: 468 VHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGI-----VKTAGGSAHSVALGAGGAVWT 522
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG+ YG LG+G P + ++ V I VA G T +S DG V ++G
Sbjct: 523 WGYNAYGQLGNGTTTQVVTPTQLPGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQ 580
Query: 343 LGHNAIAD 350
LG+ A+
Sbjct: 581 LGNGTTAN 588
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%), Gaps = 26/297 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ G + +G NS+GQLG+GTT P + +L + ++ AG T+
Sbjct: 356 HTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQD 413
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE---GRV 170
G +YA+G D+F YG GT TS + + V G +++ ++ +V
Sbjct: 414 GTLYAWG-DNF----YGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468
Query: 171 YT-FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
+T F+WG++ LG T P ++ + +V+ A G + +AL G AV+
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAVVVS----GIVKTAGGSAHSVALGA---GGAVW 521
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG+G+ T P + + + VAAG H + DG V WG+
Sbjct: 522 TWGYNAYGQLGNGTTTQVVTPTQLPGMSGV----IDVAAGVNHTVALSADGTVAAWGYNA 577
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
YG LG+G + P+ V L+ V AI + G T + DG V+++G LG
Sbjct: 578 YGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYGQLG 632
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
V+ G +H V G + WG G LG+G + P V+ LN V + + G +
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQV--VSASAGAEHS 207
Query: 324 FVVSEDGDVYSFGCGESASLG 344
V+EDG V+++G LG
Sbjct: 208 VAVTEDGSVWTWGSNAYGQLG 228
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 27/351 (7%)
Query: 16 RQDLKQKCGGSWKLV------LRFLLAGE----ACCRRENSQAI-------AGPGHSIAV 58
++L CG S K V L+ L G+ + C E Q I + +
Sbjct: 2 EEELPLFCGESGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYT 61
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 117
T ++ G+N G LG G + PR + SL G ++ + G+G +L + G+V+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVF 121
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+G +++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
++G + N P + G L+N VV IA G + ++A +G VY G G+L
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYSGNGQL 237
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G ++ P + Q + +Q A G H V+ +G+V WG YG LG GN+
Sbjct: 238 GLGGSGNQPTPCRVAALQGIRVQRA--ACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKS 295
Query: 298 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 345
+ P + D + I +T+ ++ G VY +G C G+S L H
Sbjct: 296 NQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVLPH 346
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++ +G G LG G PR ++ + + +G H + +G V TWG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGP-HVVLATSEGEVFTWGH 125
Query: 286 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
Y LG+G VP + L++ + I VA G Y + V++ DG+V+++G S +G
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 345 HNAIAD 350
+ A+
Sbjct: 186 SGSTAN 191
>gi|118373351|ref|XP_001019869.1| HECT domain and RCC1-like domain protein 3 [Tetrahymena
thermophila]
gi|89301636|gb|EAR99624.1| HECT domain and RCC1-like domain protein 3 [Tetrahymena thermophila
SB210]
Length = 403
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 24/301 (7%)
Query: 57 AVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
A++SK +Y++G + + GH + P+ I +LQ I + + G + +++ Q
Sbjct: 72 AISSKNELYTWGETKNSRNGHQANKNYILVPQKIMNLQNISRV--SCGNWHCLALNNQNQ 129
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
+Y G + +G G+ G + QL +++KNI + + G+ F+ L +VY+ +
Sbjct: 130 LYVTGHNKYGAC--GLYGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGF 187
Query: 176 GNDARLGHHTEPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
H D + + + LE I + I AG+C+ A+ Q G VY+ G G
Sbjct: 188 RQ-----MHGNKEDQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGD 240
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
+LGHG++ +K P I + H DG+V +WG G G LGH
Sbjct: 241 YYQLGHGNKQSQKKPLKINNLSGIEQVSCSRGEKNCHTLATSSDGKVYSWGSGYKGKLGH 300
Query: 294 GNE------ECESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESASLG 344
N ES P+ +Q L + K I +A +G + V+S+DG +++FGC LG
Sbjct: 301 QNSWSHEDPADESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCCSDGRLG 359
Query: 345 H 345
H
Sbjct: 360 H 360
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 19/289 (6%)
Query: 62 GVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 120
G +Y++G N++G L + ++ E P +++ Q + + G IS ++Y +G
Sbjct: 26 GFLYTWGLNTAGCLANQNEDQGEGIPFKVKTNQKFKSVSTGGFFGAA--ISSKNELYTWG 83
Query: 121 KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ + G Q K + PQ + +L+NI V + GN+ L+ + ++Y
Sbjct: 84 ETK--NSRNGHQANKNYILVPQKIMNLQNISRV--SCGNWHCLALNNQNQLYVTGHNKYG 139
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
G + +++ L T++NI + I+AG + L L VYS G + H
Sbjct: 140 ACGLYG-IDEINGFQLNDTIKNIQICSISAGDGFSLYLDI---NQQVYSSGF----RQMH 191
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEEC 298
G++ D+ ++ + +L + + AG H+AVV Q+ G V TWG G Y LGHGN++
Sbjct: 192 GNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGDYYQLGHGNKQS 251
Query: 299 ESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGESASLGH 345
+ P + L+ ++ + + G+ T S DG VYS+G G LGH
Sbjct: 252 QKKPLKINNLSGIEQVSCSRGEKNCHTLATSSDGKVYSWGSGYKGKLGH 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 27/315 (8%)
Query: 32 RFLLAGEACCRREN-SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
++L + +N S+ G H +A+ ++ +Y G N G G +E +
Sbjct: 97 NYILVPQKIMNLQNISRVSCGNWHCLALNNQNQLYVTGHNKYGACGLYGIDEINGFQLND 156
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+++ I+I +AG G ++ + QVY+ G +G + + + ++ L+ I
Sbjct: 157 TIKNIQICSISAGDGFSLYLDINQQVYSSGFRQM----HGNKEDQHQYQIKKIKELEGIA 212
Query: 151 VVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ G +AV+++E G VYT+ G+ +LGH + + +P + L I V +
Sbjct: 213 IKHINAGFCHSAVVTQERGEVYTWGSGDYYQLGHGNKQSQKKPLKI-NNLSGIEQVSCSR 271
Query: 210 G--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSR------TDEKHPRLIEQFQLLNLQP 261
G C+ LA + S VYS G G GKLGH + DE PR I+ Q +
Sbjct: 272 GEKNCHTLATS---SDGKVYSWGSGYKGKLGHQNSWSHEDPADESRPRPIQYLQEKGIVI 328
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE------CESVPKVVQA--LNDVKA 313
+G H+AV+ QDGR+ T+G G LGH +E E +P+ +Q LN+ K
Sbjct: 329 AKSISGGIHSAVLSQDGRLFTFGCCSDGRLGHIKDEKRIYLYKEPLPREIQGPFLNN-KI 387
Query: 314 IHVATGDYTTFVVSE 328
I + Y ++E
Sbjct: 388 IDACSSYYFMAAIAE 402
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
QDG + TWG GCL + NE+ E +P V+ K+ V+TG + +S ++Y+
Sbjct: 24 QDGFLYTWGLNTAGCLANQNEDQGEGIPFKVKTNQKFKS--VSTGGFFGAAISSKNELYT 81
Query: 335 FGCGESASLGHNA 347
+G +++ GH A
Sbjct: 82 WGETKNSRNGHQA 94
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQA 100
N + IA G HS AVTS G +Y++G + SSG LGH + W P+ + L +G+R+
Sbjct: 361 NVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHV 420
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ AG+++ FG +FG +G + +P+ VE+ + ++ A G +
Sbjct: 421 SCGPWHTALITSAGRLFTFGDGTFGALGHGDRSG--CITPREVETFNGLKTLKVACGVWH 478
Query: 161 TAVL--------SR-----EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
TA + SR G ++T+ G+ +LGH + P + L + ++
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQ-CITALVDKSFSEV 537
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A Y +AL + VY++G + G+LG + P +E + L++ ++ G
Sbjct: 538 ACSYAMTVALT---TTGRVYTMGSNVYGQLG-CPLANGMSPICVEDY-LVDSTVEEISCG 592
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ H AV+ V TWG G G LGHG+ E + P +V L D + + G
Sbjct: 593 SHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCG 644
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 26/333 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT +G +S+G + G+LGHG + P+ I++ +G+ + A G + +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 166
+ +G +Y +G G G+ G + S P+ V L + + V + G + TA+++
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 224
GR++TF G LGH + P + T + +++A G + A+ SG+
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491
Query: 225 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 274
+++ G G GKLGHG + PRL Q L++ VA +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
GRV T G YG LG S V L D ++ G + V++ +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607
Query: 335 FGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
+G GE+ LGH + C+ + I + Q+
Sbjct: 608 WGKGENGQLGHGDCENK--CTPTLVDILRDKQV 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 133 GTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPND 189
GT++ +P+ +ES + V + GN +++++G FSWG +A RLGH E D
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEA--FSWGEEAGGRLGHGAE-TD 347
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
V L+ + + V IA G + A+ + + G G LGH S P+
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVT-SSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ + L+ V+ G WH A++ GR+ T+G G +G LGHG+ P+ V+ N
Sbjct: 407 KVCGL-MEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFN 465
Query: 310 DVKAIHVATGDYTTFVVSE-------------DGDVYSFGCGESASLGH 345
+K + VA G + T V E G ++++G G+ LGH
Sbjct: 466 GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGH 514
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H+ +TS G +++FG + G LGHG PR + + G++ ++ A G
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477
Query: 106 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
T + SDA G ++ +G G+ +G +L +PQ + +L +
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ A T L+ GRVYT +LG N + P + L + V +I+ G
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL-ANGMSPICVEDYLVDSTVEEISCGSH 594
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 267
++ L S VY+ G G G+LGHG ++ P L++ + ++ +V AA
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651
Query: 268 AWHAAVVGQDGRVCTWGWGRYGC 290
H + D +C +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668
>gi|397587793|gb|EJK54033.1| hypothetical protein THAOC_26418 [Thalassiosira oceanica]
Length = 626
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 27/284 (9%)
Query: 79 TTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 136
T EEE P+ + L G I + A G+ IS G ++ +G +G AE G+ L
Sbjct: 218 TDEEEGFTTPQIVAKLNGEEITETAVGSSHACAISKGGDLFVWG---WGAAERGM----L 270
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH--TEPNDVEPHP 194
P+ V + ++ G V++R+G+ +TF G + RLG E N P P
Sbjct: 271 QREPKYVGA--SVVASTVTSGEKHACVIARDGQAFTFGLGANGRLGQGMGVEENVYSPKP 328
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L + N V +A G + L Q + YS GCG GG+LGHG D+ P I F
Sbjct: 329 LPVRVPNRIVRMVACGAEHTLICTQQET----YSFGCGDGGRLGHGDLADKFEPCEITFF 384
Query: 255 QLLNLQPVVVAAGAWHAAVV------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ ++ + V+AG WH+AVV G + T+G G G LG G S P +V+
Sbjct: 385 RGKHV--LDVSAGTWHSAVVVHIPPLDNSGWLYTFGNGYQGQLGLGEICHSSSPALVEEF 442
Query: 309 ND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
D + V G + V++DG++YS+G + +LG N ++
Sbjct: 443 FDQGLSVKRVVCGSHHNAAVAQDGNLYSWGSNKHGALGRNITSE 486
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 23/258 (8%)
Query: 44 ENSQAIAGPGHSIAVTSKG--VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
E ++ G H+ A++ G V+ +G+ G L + P+ + G ++ +
Sbjct: 237 EITETAVGSSHACAISKGGDLFVWGWGAAERGML-------QREPKYV----GASVVAST 285
Query: 102 AGAGRTM--LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ-LVESLKNIFVVQAAIGN 158
+G +I+ GQ + FG + G G+ + V SP+ L + N V A G
Sbjct: 286 VTSGEKHACVIARDGQAFTFGLGANGRLGQGMGVEENVYSPKPLPVRVPNRIVRMVACGA 345
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
T + +++ Y+F G+ RLGH + EP + V+ ++AG + +
Sbjct: 346 EHTLICTQQ-ETYSFGCGDGGRLGHGDLADKFEPCEIT-FFRGKHVLDVSAGTWHSAVVV 403
Query: 219 CQP----SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
P SG +Y+ G G G+LG G P L+E+F L V G+ H A V
Sbjct: 404 HIPPLDNSGW-LYTFGNGYQGQLGLGEICHSSSPALVEEFFDQGLSVKRVVCGSHHNAAV 462
Query: 275 GQDGRVCTWGWGRYGCLG 292
QDG + +WG ++G LG
Sbjct: 463 AQDGNLYSWGSNKHGALG 480
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 34/274 (12%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREG 168
+ + G VY+ GK++ G + G+ + + ++V + + ++ + N T ++
Sbjct: 137 LEERGAVYSTGKNNLG--QLGLGDLEDRCAFEVVPATRGRCILHISTSNDGITFATAKRH 194
Query: 169 RVYTFSWGNDAR----------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
VY WG R L E ++ L + + A G + A++
Sbjct: 195 DVYV--WGGGGRWTGPTGLCTSLPRTDEEEGFTTPQIVAKLNGEEITETAVGSSHACAIS 252
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ + V+ G G L ++ P+ + ++ V +G HA V+ +DG
Sbjct: 253 -KGGDLFVWGWGAAERGML-------QREPKYVG----ASVVASTVTSGEKHACVIARDG 300
Query: 279 RVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+ T+G G G LG G E+V P V+ N + + VA G T + ++ + YS
Sbjct: 301 QAFTFGLGANGRLGQGMGVEENVYSPKPLPVRVPNRIVRM-VACGAEHTLICTQQ-ETYS 358
Query: 335 FGCGESASLGHNAIADG-QVCSLLFLSIFQYLQI 367
FGCG+ LGH +AD + C + F L +
Sbjct: 359 FGCGDGGRLGHGDLADKFEPCEITFFRGKHVLDV 392
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS+AVT G VYSFG GQLGH P I +L RI + A G ++ +
Sbjct: 42 GEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLAL 101
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G++Y +G+ E + +G + +P + +K I + LS +
Sbjct: 102 TDTGKIYEWGQ--LHEIDKSAKG---LEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAA 156
Query: 171 YTFSWGNDARLGHHTEPND--------------------------------------VEP 192
Y + N + + + N+ V+
Sbjct: 157 YDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQL 216
Query: 193 HPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PLL G+++N VV ++AG+ Y + A SG V++ G G+LG G R P+ +
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAY--SAAVTKSG-KVFTWGFNEKGQLGLGDRWFHGLPQQV 273
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ F N+ V V+ G H V+ G + TWG G +G LGHG + PK V A ++
Sbjct: 274 KFF--TNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEA 331
Query: 312 -----KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
K VA G T ++ DG ++SFG GE LG
Sbjct: 332 DQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLG 369
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 138/316 (43%), Gaps = 39/316 (12%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
V SFG N QLGH ++ P I++L G+RI+ +A G ++ +++ G VY+FG+
Sbjct: 3 VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
E + G P ++ +L + + + A GNF + L+ G++Y WG +
Sbjct: 63 --EGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIY--EWGQLHEIDK 118
Query: 184 HTE----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV------------- 226
+ P+ + +G I Q + Y A P+ +
Sbjct: 119 SAKGLEAPSGLIEMKGIGFASRI-AEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDA 177
Query: 227 ---------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAW 269
+ G GG + + +++++ QL N Q V ++AG
Sbjct: 178 EDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWA 237
Query: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 329
++A V + G+V TWG+ G LG G+ +P+ V+ +V + V+ G V+S+
Sbjct: 238 YSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQ 297
Query: 330 GDVYSFGCGESASLGH 345
GD++++G G LGH
Sbjct: 298 GDLFTWGLGVFGQLGH 313
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPH 193
+P LV S+KN VV + G ++A +++ G+V+T+ + +LG H P V+
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVK-- 274
Query: 194 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
N+ +V ++ G ++ ++ Q +++ G G+ G+LGHG HP+ +
Sbjct: 275 ----FFTNVHIVSVSCGRQHIGVISDQGD---LFTWGLGVFGQLGHGKLKSCLHPKKVLA 327
Query: 254 F---QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----------- 299
F LN + VA GA + DGR+ ++G G YG LG EE +
Sbjct: 328 FSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLG-ATEENQYRDWNRGGNGN 386
Query: 300 ----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+VP+ V+AL VK V G T VV+ED DVYS+G G S LG
Sbjct: 387 GNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLG 441
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P + S++ +++ +AG + ++ +G+V+ +G + G+ G+ PQ V+
Sbjct: 218 PLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQ--LGLGDRWFHGLPQQVKF 275
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE----N 201
N+ +V + G V+S +G ++T+ G +LGH + + P +L E N
Sbjct: 276 FTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLN 335
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
V Q+A G + +AL ++S G G G+LG +
Sbjct: 336 QKVRQVACGANFTMALTVDGR---LWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREA 392
Query: 248 ------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P+ +E L +++ V G H VV +D V +WGWG GCLG G+ + + V
Sbjct: 393 HLQYAVPQQVEA--LASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLV 450
Query: 302 PKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIADGQVCSLLFL 359
P+ V AL+ ++ G+ + VV S D ++F N + D + ++FL
Sbjct: 451 PQRVPALSGEIVSSISAGEKHSLVVRSTDTTTFAFDY-------RNLLNDKKHSDIVFL 502
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 28 KLVLRFLLAGEACCRRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
K+V R L +N Q + AG +S AVT G V+++G N GQLG G
Sbjct: 209 KIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHG 268
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
P+ ++ + I+ + G +ISD G ++ +G FG+ +G K P+ V
Sbjct: 269 LPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHG--KLKSCLHPKKVL 326
Query: 145 SLK-----NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE------------- 186
+ N V Q A G FT L+ +GR+++F G +LG E
Sbjct: 327 AFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGN 386
Query: 187 ------------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
P VE L ++ V Q+ G+ + + + VYS G G
Sbjct: 387 GNEREAHLQYAVPQQVE------ALASVKVKQVTCGHLHTIVVT---EDNDVYSWGWGAS 437
Query: 235 GKLGHGSRTDEKHPRLI 251
G LG G R + P+ +
Sbjct: 438 GCLGFGDRKFQLVPQRV 454
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M+V S G +LGH D P +I+ L ++ V+ A G H+ V + G V ++
Sbjct: 1 MSVISFGVNKQSQLGHALEKDHLDPSVIQN--LSGMRIVMSACGEAHSLAVTEFGDVYSF 58
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G GR G LGH + + P V+ AL + VA G++ + +++ G +Y +G
Sbjct: 59 GRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWG 111
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 18/305 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 104
Q + G + V + G V + G S G+LG G +++ I S+QG + Q A
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894
Query: 105 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
G T+ ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQLSCGFKHSAV 1952
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
++ +G+++TF G+ RLG T N P ++ LE+ + +A G + L ++ G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSAD--G 2009
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G GKLG G+ + P I+ Q ++ VA G + + + G+V TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKK--VACGTQFSVALSKYGKVFTW 2067
Query: 284 GWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G R +G G C+ P+ V +L+ V G T V++ DGDV+ +G
Sbjct: 2068 GQERL--IGQPDTRGGSNCQ--PQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNS 2123
Query: 340 SASLG 344
LG
Sbjct: 2124 EGQLG 2128
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
++ GH++AVT G V+S+G G+LGHG ++ + RPR I +LQG +IQ + G +
Sbjct: 1891 SVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHS 1950
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+++ G+++ FG +G G K V P V +L++ + A G T +S +
Sbjct: 1951 AVVTADGKLFTFGNGDYGRLGLGTTTNKKV--PTRVVALESHQIGYVACGLNHTLCVSAD 2008
Query: 168 G-RVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G V+ F G+ +LG + N V H + L+ + ++A G + +AL+
Sbjct: 2009 GTNVWAFGDGDFGKLG---QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS------ 2059
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL---NLQPVVVAA-----------GAWH 270
+G RLI Q N QP VA+ GA H
Sbjct: 2060 -------------KYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEH 2106
Query: 271 AAVVGQDGRVCTWGWGRYG----CLGHGNEECESVPKVVQAL 308
V+ DG V WGWG LGH N P++V L
Sbjct: 2107 TLVLTSDGDV--WGWGSNSEGQLGLGHTNSPVRE-PQLVPCL 2145
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
EA E Q G HS VT+ G +++FG+ G+LG GTT + P + +L+ +I
Sbjct: 1933 EALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQI 1992
Query: 98 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
A G T+ +S D V+AFG FG+ G K + P +++L+ + + A
Sbjct: 1993 GYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHL--PTKIKALQGHVIKKVAC 2050
Query: 157 GNFFTAVLSREGRVYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
G F+ LS+ G+V+T WG D R G + +P +V +L + +
Sbjct: 2051 GTQFSVALSKYGKVFT--WGQERLIGQPDTRGGSNCQPQEV------ASLSGYFIEDVVC 2102
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLI 251
G + L L S V+ G G+LG G + + + P+L+
Sbjct: 2103 GAEHTLVLT---SDGDVWGWGSNSEGQLGLGHTNSPVREPQLV 2142
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 329
VV +G V G G YG LG GN + + ++ +AT D T V+E
Sbjct: 1845 VVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTES 1904
Query: 330 GDVYSFGCGESASLGH 345
G+V+S+G G+ LGH
Sbjct: 1905 GEVFSWGDGDYGKLGH 1920
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQA 100
N + IA G HS AVTS G +Y++G + SSG LGH + W P+ + L +G+R+
Sbjct: 361 NVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHV 420
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ G T LI+ AG+++ FG +FG +G + +P+ VE+ + ++ A G +
Sbjct: 421 SCGPWHTALITSAGRLFTFGDGTFGALGHGDRSG--CITPREVETFNGLKTLKVACGVWH 478
Query: 161 TAVL--------SR-----EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
TA + SR G ++T+ G+ +LGH + P + L + ++
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQ-CITALVDKSFSEV 537
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A Y +AL + VY++G + G+LG + P +E + L++ ++ G
Sbjct: 538 ACSYAMTVALT---TTGRVYTMGSNVYGQLG-CPLANGMSPICVEDY-LVDSTVEEISCG 592
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ H AV+ V TWG G G LGHG+ E + P +V L D + + G
Sbjct: 593 SHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCG 644
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 26/333 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT +G +S+G + G+LGHG + P+ I++ +G+ + A G + +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 166
+ +G +Y +G G G+ G + S P+ V L + + V + G + TA+++
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 224
GR++TF G LGH + P + T + +++A G + A+ SG+
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491
Query: 225 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 274
+++ G G GKLGHG + PRL Q L++ VA +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
GRV T G YG LG S V L D ++ G + V++ +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607
Query: 335 FGCGESASLGHNAIADGQVCSLLFLSIFQYLQI 367
+G GE+ LGH + C+ + I + Q+
Sbjct: 608 WGKGENGQLGHGDCENK--CTPTLVDILRDKQV 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 133 GTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPND 189
GT++ +P+ +ES + V + GN +++++G FSWG +A RLGH E D
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEA--FSWGEEAGGRLGHGAE-TD 347
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
V L+ + + V IA G + A+ + + G G LGH S P+
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVT-SSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ + L+ V+ G WH A++ GR+ T+G G +G LGHG+ P+ V+ N
Sbjct: 407 KVCGL-MEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFN 465
Query: 310 DVKAIHVATGDYTTFVVSE-------------DGDVYSFGCGESASLGH 345
+K + VA G + T V E G ++++G G+ LGH
Sbjct: 466 GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGH 514
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S GP H+ +TS G +++FG + G LGHG PR + + G++ ++ A G
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477
Query: 106 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 152
T + SDA G ++ +G G+ +G +L +PQ + +L +
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ A T L+ GRVYT +LG N + P + L + V +I+ G
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL-ANGMSPICVEDYLVDSTVEEISCGSH 594
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 267
++ L S VY+ G G G+LGHG ++ P L++ + ++ +V AA
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651
Query: 268 AWHAAVVGQDGRVCTWGWGRYGC 290
H + D +C +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 29/321 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+A +G HS+ + S VYS G NS GQLG + + RP PI++L + I + G
Sbjct: 183 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEH 242
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 243 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 301
Query: 167 EGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+G+V FSWG++ + L P V+ +LE IP+ Q+AAG + AL+
Sbjct: 302 DGQV--FSWGSNRQGQLGLGNNLCSQASPQKVK------SLEGIPLAQVAAGGTHSFALS 353
Query: 219 CQPSGMAVYSVGCGLGGKL---GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ + G G+L G+ ++ P I + LN+ V ++ G H +V+
Sbjct: 354 LMGTS---FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLT 408
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
+DG+V T+G L H P++++ + + G Y T V G V S
Sbjct: 409 EDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVS 467
Query: 335 FGCGESASLGHNAIADGQVCS 355
G G S + NA CS
Sbjct: 468 LGRGPSCT--SNATHQEAACS 486
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 13/267 (4%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+PR + + G+++++AA+G ++L+ +VY+ G +S G + G + + P+ ++
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRG--QLGQKSPQSTKRPEPIQ 226
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+L + + + G + + +GRV+T+ G++ +LG E ++ P + +L I
Sbjct: 227 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEISFMPTKINSLAGIK 285
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV 262
++Q++ G+ + LAL+ V+S G G+LG G+ + P+ ++ + + L
Sbjct: 286 IIQVSCGHYHSLALS---EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL--A 340
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATG 319
VAAG H+ + G WG R G L GN E + P + AL + ++++ G
Sbjct: 341 QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCG 400
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHN 346
T V++EDG V++FG S L H+
Sbjct: 401 YEHTSVLTEDGQVFTFGGSSSEQLQHS 427
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L+ + ++ +
Sbjct: 340 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISC 399
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
G T ++++ GQV+ FG S + ++ + + PQL+E +
Sbjct: 400 GYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGI 441
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR +E L L + A+G H+ ++ + RV + G G LG + + P+ +
Sbjct: 168 RQPRRLEAGTGLKL--LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 225
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
QAL+ V V+ G + V G V+++G G LG
Sbjct: 226 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG 264
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 57/359 (15%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQ 93
L EA + ++ + IA +I + G++ S+G+NS G LGH G E+ W P I SL
Sbjct: 541 LLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQLW-PLAIESLS 598
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------- 143
+++ AAG ++ +++ G+V +FG + G+ G TK+ S L
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQC--GQPITKIAESSDLAAVARPRPIVL 656
Query: 144 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT----------------- 185
+ L+ VV A G + +A+++ +G +YTF G + +LGH T
Sbjct: 657 PDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNS 716
Query: 186 -EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
+ + +P P L L V Q+A G + AC A+Y+ G G G+LGHG T
Sbjct: 717 AQTSYFQPKPTRLSALNGQVVKQVACGRFH---SACVTEEGALYTWGRGANGQLGHGDMT 773
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE------- 296
D+ P+ +E + + V VA G H+A V G + T G G LG G+E
Sbjct: 774 DQATPKRVEA-GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832
Query: 297 --------EC-ESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
C E +P + L+ V+ + +A G ++ G +Y++G G + LG
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG 891
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 139/375 (37%), Gaps = 104/375 (27%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--------EEWRP 86
LA E+ + AG HS+ +T G V SFG N GQ G T+ RP
Sbjct: 592 LAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARP 651
Query: 87 RPI---RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------------- 130
RPI L+ ++ AAG + L++ G++Y FG+ GE + G
Sbjct: 652 RPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG--GEFQLGHDTVMALGEGGNA 709
Query: 131 -------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
Q + P + +L V Q A G F +A ++ EG +YT+ G + +LGH
Sbjct: 710 LHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGH 769
Query: 184 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-------------------------- 217
+ P + +++ +V++A G + A+
Sbjct: 770 GDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICA 829
Query: 218 -----------ACQ---PSGMAVYSV--------GCGLG--------------GK---LG 238
+CQ P+ +++ SV CG G GK LG
Sbjct: 830 THGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALG 889
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NE 296
G D P + + V VA G HAA + G++ WG G LG G E
Sbjct: 890 LGPSGDVSEPTHLSSIDGV----VSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTE 945
Query: 297 ECESVPKVVQALNDV 311
PK+V A D+
Sbjct: 946 GVTRTPKLVPAFADI 960
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 204
SLKN + I ++ + + G + ++ +D LGH + P + +L ++ V
Sbjct: 546 SLKN--KSEEFIAEYYKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLAI-ESLSSVQV 602
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEK-------HPRLIEQFQL 256
+AAG + L C V S G G+ G ++ E PR I
Sbjct: 603 KMVAAGEFHSL---CLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDD 659
Query: 257 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH---------GN----------- 295
L + VV +AAG +H+A+V DG + T+G G LGH GN
Sbjct: 660 LRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQT 719
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ P + ALN VA G + + V+E+G +Y++G G + LGH + D
Sbjct: 720 SYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTD 774
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 127 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 186
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 187 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 246
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 247 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 304
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 305 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 364
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 365 QILPVPNVVVRDVACGANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 421
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 422 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 475
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 476 SLACGK-SSIIVAADESTISWG 496
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 249 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 307
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 308 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 366
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 367 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 424
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 425 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 475
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 476 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 532
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 533 MGYSHSLVIARD 544
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 181 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 238
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 239 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 294
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 295 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 335
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 206 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 264
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 265 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 317
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 318 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 377
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 378 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 423
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 416 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 464
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 465 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 524
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 525 GIFSEQVAMGYSHSLVIARD 544
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 161/360 (44%), Gaps = 27/360 (7%)
Query: 4 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGV 63
+ I KP+ ++ G W L L + C R+ + +I T
Sbjct: 54 RERICKPVIACTNRNTDMVDFGKWPL-FALLSPQDLACIRQACVFGSSANEAIYTTQNNE 112
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
V+ FG NSS LG G + PR + L G +I + G+G +L ++ G+VY++G +
Sbjct: 113 VFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHN 172
Query: 123 SFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
+ + G +QGT T Q+ L + V++ A G+ + L+ +G V+++ + N +
Sbjct: 173 GYSQLGNGNTIQGT---TPVQVCMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSGQ 229
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
+G T N P + +L++ VV IAAG +A+ VY G G+LG G
Sbjct: 230 VGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAIT---DNGHVYGWGYNGTGQLGLG 286
Query: 241 SRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
+ ++ P +L+ QPV V G H+ + G + WG +G LG GN+
Sbjct: 287 NTGNQLMP-----CRLVFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKS 341
Query: 298 CESVPKVVQALNDVKAIHVATGDYTTFVV--SEDGDVYSFG-----CGESASLGHNAIAD 350
++VP V+ + + + VA T S+ G VY +G C S L H + D
Sbjct: 342 NQTVP--VKVGTNERMVEVAACHSTNISAAKSQSGQVYMWGLCRGQCLLSPHLTHFSCTD 399
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAGRTML 109
G HS+A+TS G V+S+G N+SGQ+G GTT + PR + SLQ ++ AAG +M
Sbjct: 206 GSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMA 265
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I+D G VY +G + G+ G G +L+ P + + + ++Q +G + LS +G
Sbjct: 266 ITDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFAQPVCIIQVVLGYAHSLALSDQGV 323
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+Y + + +LG + N P +GT E + V++AA + ++ A SG VY
Sbjct: 324 LYAWGANSHGQLGIGNKSNQTVPVK-VGTNERM--VEVAACHSTNISAAKSQSGQ-VYMW 379
Query: 230 G-----CGLGGKLGHGSRTDE 245
G C L L H S TD+
Sbjct: 380 GLCRGQCLLSPHLTHFSCTDD 400
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L C G VYS G +LG+G+ P + +LL+ + + VA G+ H+ +
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTPVQV-CMELLSKKVIKVACGSHHSMALTS 215
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V +WG+ G +G G +SVP KV +L + +A G ++ ++++G VY +
Sbjct: 216 DGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGW 275
Query: 336 GCGESASLGHNAIADGQV-CSLLFLSIFQYLQIWL 369
G + LG + + C L+F +Q+ L
Sbjct: 276 GYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVL 310
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H ++ G ++++G G+LGHG E P+ + +L I + G T+
Sbjct: 136 AGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIA 195
Query: 110 IS-DAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+S AG +Y +G + FG+ G G P+ V +V G AV+
Sbjct: 196 LSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSS 255
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G ++T+ G+ RLGH N +P L+ +L VV +A G + LAL ++
Sbjct: 256 GALFTWGRGDHGRLGHGDTENRYQP-TLVSSLYGHVVVAVALGGGHSLALT---KAGELF 311
Query: 228 SVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 285
S G G G+LGHGS ++ + P+ ++ F +++ ++ ++AG +H+ DG V WG
Sbjct: 312 SWGRGENGQLGHGSYQSQQLAPKQLQFF--VDMPKIIGISAGGYHSVAQLDDGSVYAWGM 369
Query: 286 GRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
YG LG G+ + ++P+ + ++ ++ G T ++ D +YS+GCG L
Sbjct: 370 SDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRL 429
Query: 344 G 344
G
Sbjct: 430 G 430
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 24/269 (8%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
RII AGA +IS +G+++ +G+ +G +G + + +++P+ V +L NI +
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKYVF 187
Query: 156 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 213
G T LS ++WGN+ +LG +D P E++ V G
Sbjct: 188 CGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLP-----ESVAV----PGAKR 238
Query: 214 LLAL-------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
L+AL A S A+++ G G G+LGHG + P L+ L V VA
Sbjct: 239 LVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVS--SLYGHVVVAVAL 296
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV-KAIHVATGDYTTF 324
G H+ + + G + +WG G G LGHG+ + + + PK +Q D+ K I ++ G Y +
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV 356
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQV 353
+DG VY++G + LG DG +
Sbjct: 357 AQLDDGSVYAWGMSDYGILGTGDSDDGAI 385
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG + + S G ++++G G+LGHG TE ++P + SL G ++ A G G ++
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLA 303
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ AG+++++G+ G+ +G ++ + QL + ++ + G + + +G
Sbjct: 304 LTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGS 363
Query: 170 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
VY + + LG ++ + + I I+ G+ + +AL S +YS
Sbjct: 364 VYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT---SDNTIYS 420
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
GCGLGG+LG + ++ P + N QPVV +AG V+G+ V G
Sbjct: 421 WGCGLGGRLGTFNEKNQCAPIAC---NIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
A++S+ G+++T+ G RLGH E + P ++ L NIP+ + G +AL+
Sbjct: 142 AMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVA-LANIPMKYVFCGGRSTIALS-HT 199
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+G +Y+ G G+LG G D+ L E + + +V + AGA AAV+ G +
Sbjct: 200 AGSGLYTWGNNEFGQLGRGDCGDD-FTCLPESVAVPGAKRLVALDAGASRAAVIDSSGAL 258
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 340
TWG G +G LGHG+ E P +V +L + VA G + +++ G+++S+G GE+
Sbjct: 259 FTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGEN 318
Query: 341 ASLGHNAIADGQVC 354
LGH + Q+
Sbjct: 319 GQLGHGSYQSQQLA 332
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 134/284 (47%), Gaps = 13/284 (4%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
+Y++G+N GQLG G +++ P + R++ AGA R +I +G ++ +G+
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGR 263
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G T+ P LV SL VV A+G + L++ G ++++ G + +L
Sbjct: 264 GDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQL 321
Query: 182 GHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 240
GH + + + P L ++ ++ I+AG + +A Q +VY+ G G LG G
Sbjct: 322 GHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVA---QLDDGSVYAWGMSDYGILGTG 378
Query: 241 SRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
D P+ I + + + ++ G H + D + +WG G G LG NE+
Sbjct: 379 DSDDGAINIPQRILMPRGIRFK--TISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
+ P + + + + + + G+ +T V+ + V + G +++
Sbjct: 437 QCAP-IACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSGLTST 479
>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
Length = 655
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 294 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 353
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 354 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 411
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 412 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 471
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 472 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 528
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 529 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 581
Query: 331 DVYSFG 336
S+G
Sbjct: 582 STISWG 587
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 340 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 398
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 399 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 457
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 458 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 515
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 516 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 566
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 567 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 623
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 624 MGYSHSLVIARD 635
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 272 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 329
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 330 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 385
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 386 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 426
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL
Sbjct: 297 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT---E 352
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 353 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 408
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 409 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 468
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 469 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 514
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 507 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 555
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 556 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 615
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 616 GIFTEQVAMGYSHSLVIARD 635
>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
Length = 440
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 69/386 (17%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
KL+ L + C + AG GH+I + G V++ G N+ GQ+G T E+ P
Sbjct: 5 KLLFILLTSLSFCTAAQ--MVDAGNGHAIVLDKDGKVFTMGRNNYGQIGDSTYEDHNTPY 62
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
+ L I+II A G ++ I + G+V+A+G++++G+ + +PQLV + +
Sbjct: 63 HVERLPKIKII--ARGYDHSLAIDEQGRVWAWGRNNYGQLGSAIPID--FNTPQLVVNHR 118
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG----TLEN 201
+ V+ G++ T L +G V+T WG++ LG T + P ++ TL+
Sbjct: 119 DFISVEG--GHWHTVALKEDGTVWT--WGHNFYGELGDGTREHSQYPRSVVKKDKTTLQG 174
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------ 255
I V ++ GY LA +G VYS G G+LGH + + +E Q
Sbjct: 175 I-VKIVSVGYH---TLALDKNG-EVYSWGSNDFGELGHFHNVIQHYAEKVEGLQNIKSIA 229
Query: 256 ---------------------------------------LLNLQPVV-VAAGAWHAAVVG 275
+ +L P+V +A G+WH+ +
Sbjct: 230 VGWHHSVAINENGELFMWGSDPSTQVRESTSDHFNSIVKIDSLPPMVKIACGSWHSLAID 289
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G+V WG RYG LG + + PK + ++ I G + + + + GD Y+F
Sbjct: 290 ETGQVWGWGNNRYGMLGTKDTISYTYPKKIPGFKGIEEI--GGGCFQSLAIDKKGDFYTF 347
Query: 336 GCGESASLGHNAIADGQVCSLLFLSI 361
G S G A V + L LS+
Sbjct: 348 GGNASGQQGQGDFAYIFVPTKLDLSL 373
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 127/260 (48%), Gaps = 20/260 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL----------------QG 94
G H AVT+ GV+ S+G+ GQLG G + +SL
Sbjct: 274 GQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGH 333
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
++ A GAG T+ ++ G+V++FG+ +FG +G + V P+LV++L + V Q
Sbjct: 334 VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV--PRLVDALWGVGVAQI 391
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCY 213
A G+ +A LS GRVYT+ G LGH N P P+ + + QIA G +
Sbjct: 392 AAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDH 451
Query: 214 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
LA+A SG+ + + G G G G G+ D P +I++ L + + ++AG+ H+
Sbjct: 452 TLAIAGGGSGV-LLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVA 510
Query: 274 VGQDGRVCTWGWGRYGCLGH 293
V + G V TWG G LGH
Sbjct: 511 VTEGGCVYTWGARTQGQLGH 530
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 34/291 (11%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 142
PR + SL G + A GA ++ ++ AG+VYAFG D GE + T+L V P
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPE 257
Query: 143 VESLKNIF--VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN---------- 188
V + N V A G A ++ G + SWGN+ +LG +
Sbjct: 258 VTATTNAMPRVATVACGQRHCAAVTTSGVL--LSWGNEEFGQLGQGPPRDSSSKGDAKSL 315
Query: 189 -----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 243
D P L ++ +A G + LAL V+S G G G LGHG R
Sbjct: 316 IRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGR---VFSFGRGAFGALGHGDRL 372
Query: 244 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+ PRL++ L + +AAG H+A + GRV TWG G+YG LGH + + S P
Sbjct: 373 NCDVPRLVDA--LWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPT 430
Query: 304 VVQALND--VKAIHVATGDYTTFVVSEDGD--VYSFGCGESASLGHNAIAD 350
VQAL+D V+ +A G T ++ G + ++G G S G A AD
Sbjct: 431 PVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATAD 481
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 136/330 (41%), Gaps = 32/330 (9%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------PRPIRSLQGI- 95
R+ + G HS+AVTS G VY+FG + SG+ + R P + +
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPEVTATTNAMP 266
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--------QGTKLVTS-------P 140
R+ A G ++ +G + ++G + FG+ G L+ P
Sbjct: 267 RVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP 326
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+LV S ++ A G T L+ GRV++F G LGH N P L+ L
Sbjct: 327 RLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPR-LVDALW 384
Query: 201 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
+ V QIAAG + +L+ SG VY+ G G G LGH + P ++ ++
Sbjct: 385 GVGVAQIAAGDNHSASLSA--SGR-VYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVR 441
Query: 261 PVVVAAGAWHAAVV--GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHV 316
+A G H + G G + WG G G G G P ++ L D K +
Sbjct: 442 CEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQI 501
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
+ G + V+E G VY++G LGH
Sbjct: 502 SAGSKHSVAVTEGGCVYTWGARTQGQLGHE 531
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT G +Y FGSN+ GQLG +P +++L+ +++ A+ G T+L
Sbjct: 45 GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G++Y+ G +S E + G+ T TS Q + + + Q + G+ +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 223
+ F WG+++ +LG +E + T + I P+ I+ GY Y A Q
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y+ G GKLG S +KH + ++ L+ + +V+ G H V + V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268
Query: 284 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G++G LGHG E+ +PK V L ++V G+ T V+++ G +Y+FG G
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328
Query: 343 LG 344
LG
Sbjct: 329 LG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 22/256 (8%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 106
A G H++ T +G +YS G NS GQLG G T + I +I Q +AG+
Sbjct: 94 ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G+++ +G +S E + G++ + ++PQ ++ K I + + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209
Query: 167 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+G +YTF + +LG P+D +P + G + +V + G + +A+ +
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
VY+ G G G+LGHG+ E +L + +L + ++ V G H AV+ G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFET--QLPKAVDVLTKKTILYVTCGENHTAVITDKGLL 318
Query: 281 CTWGWGRYGCLGHGNE 296
T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 15/257 (5%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L+ + + G T+L++ G++Y FG +++G+ G++ ++ P V++LK+ V
Sbjct: 34 LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKV 91
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V A+ G T + + +G++Y+ ++ +LG + + Q++AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWH 270
AL ++ G G+LG P+ I+ + P+ ++ G +H
Sbjct: 152 NTSAALTVD---GKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGK-----PISWISCGYYH 203
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSE 328
+A V QDG + T+G G LG +++ + P+ V L+ I G++T V
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT-- 261
Query: 329 DGDVYSFGCGESASLGH 345
+ +VY+FG G+ LGH
Sbjct: 262 EKEVYTFGLGQFGQLGH 278
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S A+T G ++ +G NS GQL G +E P + G I + G
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G++Y FG+ G+ K PQ V L + + G AV +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E VYTF G +LGH T + + + L ++ + G + + + G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G G GKLG G T++ P L F +Q VA G H V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQ--SVACGGCHMLV 365
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F L N +P ++ G H +V +G++ +G +G LG S P V+AL K
Sbjct: 31 KFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + G T + +E G +YS G LG
Sbjct: 91 VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG 122
>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
Length = 427
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR + L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTET 125
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 331 DVYSFG 336
S+G
Sbjct: 354 STISWG 359
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 339 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 395
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 44 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 101
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 198
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 127
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 342
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 402
Query: 163 VLSRE 167
V++R+
Sbjct: 403 VIARD 407
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H++ VT G +Y FGSN+ GQLG +P +++L+ +++ A+ G T+L
Sbjct: 45 GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G++Y+ G +S E + G+ T TS Q + + + Q + G+ +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 223
+ F WG+++ +LG +E + T + I P+ I+ GY Y A Q
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y+ G GKLG S +KH + ++ L+ + +V+ G H V + V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268
Query: 284 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G++G LGHG E+ +PK V L ++V G+ T V+++ G +Y+FG G
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328
Query: 343 LG 344
LG
Sbjct: 329 LG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 22/256 (8%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 106
A G H++ T +G +YS G NS GQLG G T + I +I Q +AG+
Sbjct: 94 ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G+++ +G +S E + G++ + ++PQ ++ K I + + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209
Query: 167 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
+G +YTF + +LG P+D +P + G + +V + G + +A+ +
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
VY+ G G G+LGHG+ E +L + +L + ++ V G H AV+ G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFET--QLPKAVDVLTKKTILYVTCGENHTAVITDKGLL 318
Query: 281 CTWGWGRYGCLGHGNE 296
T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 15/257 (5%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
L+ R + G T+L++ G++Y FG +++G+ G++ ++ P V++LK+ V
Sbjct: 34 LKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKV 91
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V A+ G T + + +G++Y+ ++ +LG + + Q++AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWH 270
AL ++ G G+LG P+ I+ + P+ ++ G +H
Sbjct: 152 NTSAALTVD---GKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGK-----PISWISCGYYH 203
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSE 328
+A V QDG + T+G G LG +++ + P+ V L+ I G++T V
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT-- 261
Query: 329 DGDVYSFGCGESASLGH 345
+ +VY+FG G+ LGH
Sbjct: 262 EKEVYTFGLGQFGQLGH 278
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S A+T G ++ +G NS GQL G +E P + G I + G
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G++Y FG+ G+ K PQ V L + + G AV +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E VYTF G +LGH T + + + L ++ + G + + + G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G G GKLG G T++ P L F +Q VA G H V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQ--SVACGGCHMLV 365
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F L N +P ++ G H +V +G++ +G +G LG S P V+AL K
Sbjct: 31 KFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + G T + +E G +YS G LG
Sbjct: 91 VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG 122
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 24/292 (8%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G H+ A+T G +YS+G +++ LGHG W P+ + +LQG+ + A G T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHT 406
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
+++ +GQ++ FG SFG +G + + V P+ V+ L + V + A G + TA L
Sbjct: 407 AVVASSGQLFTFGDGSFGALGHGDRRSTSV--PREVKILSGLIVTKVACGVWHTAALVEV 464
Query: 165 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 214
S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 465 TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVI-SLSNENICQVACGHSLT 523
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
++L S VY++G G+LG+ + R+ + ++ +A G++H AV+
Sbjct: 524 VSLT---STGHVYTMGSTAYGQLGNPTAKGNFPARV--EGDIVEASVEEIACGSYHVAVL 578
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+ TWG G G LGHG E + P VV L + + + G T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 27/298 (9%)
Query: 72 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 131
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 264 TGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323
Query: 132 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEP 187
+ V P+ + S++ + A G+F T +++ G +Y SWG N LGH E
Sbjct: 324 ETD--VQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379
Query: 188 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 247
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 380 SCWIPKRVTGALQGLYVSYVACGPWHTAVVA---SSGQLFTFGDGSFGALGHGDRRSTSV 436
Query: 248 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 294
PR ++ L L VA G WH A + G+V TWG G G LGHG
Sbjct: 437 PREVK--ILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHG 494
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ + + +P+ V +L++ VA G T ++ G VY+ G LG N A G
Sbjct: 495 DNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLG-NPTAKGN 551
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 19/322 (5%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 288 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACG 347
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 162
T I+ +G +Y++G + G P+ V +L+ ++V A G + TA
Sbjct: 348 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTA 407
Query: 163 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-- 218
V++ G+++T +G+ + LGH + P + L + V ++A G + AL
Sbjct: 408 VVASSGQLFT--FGDGSFGALGHGDRRSTSVPRE-VKILSGLIVTKVACGVWHTAALVEV 464
Query: 219 --------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
S V++ G G G+LGHG + P + L N VA G
Sbjct: 465 TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECV--ISLSNENICQVACGHSL 522
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ G V T G YG LG+ + +V + + +A G Y V++
Sbjct: 523 TVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKS 582
Query: 331 DVYSFGCGESASLGHNAIADGQ 352
++Y++G G + LGH I + +
Sbjct: 583 EIYTWGKGLNGQLGHGTIENKR 604
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G G L + + D P+ +E +L+ Q +A G HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDVLLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
GHG E PK + ++ + +A GD+ T +++ GD+YS+G G
Sbjct: 320 GHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG 366
>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
Length = 520
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 83 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 202
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 378 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 431
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 432 SLACGK-SSIIVAADESTISWG 452
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 381 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 488
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 489 MGYSHSLVIARD 500
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 291
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 379
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 372 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 481 GIFTEQVAMGYSHSLVIARD 500
>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
africana]
Length = 523
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 86 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ P+ I L I
Sbjct: 146 XSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 205
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 263
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 264 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 323
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 324 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L K
Sbjct: 381 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIR 434
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 435 SLACGK-SSIIVAADESTISWG 455
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 208 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 266
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 267 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 325
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 326 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 383
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 384 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 434
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 435 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 491
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 492 MGYSHSLVIARD 503
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 140 PH-RYGCXSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 197
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 294
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 223
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 382
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 375 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 423
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G +I A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 424 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 483
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 484 GIFTEQVAMGYSHSLVIARD 503
>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
Length = 520
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 83 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ PR + L I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 378 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 431
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 432 SLACGK-SSIIVAADESTISWG 452
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 381 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 488
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 489 MGYSHSLVIARD 500
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 291
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 379
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 372 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 420
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 480
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 481 GIFTEQVAMGYSHSLVIARD 500
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 29/321 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+A +G HS+ + S VYS G NS GQLG + + RP PI++L + I + G
Sbjct: 183 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEH 242
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 243 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 301
Query: 167 EGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
+G+V FSWG++ + L P V+ +LE IP+ Q+AAG + AL+
Sbjct: 302 DGQV--FSWGSNRQGQLGLGNNLCSQASPQKVK------SLEGIPLAQVAAGGTHSFALS 353
Query: 219 CQPSGMAVYSVGCGLGGKL---GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 275
+ + G G+L G+ ++ P I + LN+ V ++ G H +V+
Sbjct: 354 LMGTS---FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLT 408
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
+DG+V T+G L H P++++ + + G Y T V G V S
Sbjct: 409 EDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVS 467
Query: 335 FGCGESASLGHNAIADGQVCS 355
G G S + NA CS
Sbjct: 468 LGRGPSCT--SNATHQEAACS 486
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 137/267 (51%), Gaps = 13/267 (4%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+PR + + G+++++AA+G ++L+ +VY+ G +S G + G + + P+ ++
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRG--QLGQKSPQSTKRPEPIQ 226
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 203
+L + + + G + + +GRV+T+ G++ +LG E ++ P + +L I
Sbjct: 227 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG-IGESKEISFMPTKINSLAGIK 285
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV 262
++Q++ G+ + LAL+ V+S G G+LG G+ + P+ ++ + + L
Sbjct: 286 IIQVSCGHYHSLALS---EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPL--A 340
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATG 319
VAAG H+ + G WG R G L GN E + P + AL + ++++ G
Sbjct: 341 QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCG 400
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGHN 346
T V++EDG V++FG S L H+
Sbjct: 401 YEHTSVLTEDGQVFTFGGSSSEQLQHS 427
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L+ + ++ +
Sbjct: 340 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISC 399
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 146
G T ++++ GQV+ FG S + ++ + + PQL+E +
Sbjct: 400 GYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGI 441
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 246 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ PR +E L L + A+G H+ ++ + RV + G G LG + + P+ +
Sbjct: 168 RQPRRLEAGTGLKL--LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPI 225
Query: 306 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
QAL+ V V+ G + V G V+++G G LG
Sbjct: 226 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLG 264
>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
Length = 521
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G T+ +++
Sbjct: 160 HSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTET 219
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 220 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 277
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 278 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 337
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 338 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTC 394
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 395 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 447
Query: 331 DVYSFG 336
S+G
Sbjct: 448 STISWG 453
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 206 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 264
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 265 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 323
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 324 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 381
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 382 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 432
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 433 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 489
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 490 MGYAHSLVIARD 501
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 138 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-TLWSWGRNEKGQLGHGDTKRVEAPKLI 195
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 196 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 251
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 252 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 292
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG ++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 163 LITTEGTLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 221
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 222 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 274
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 334
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 335 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 380
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 373 RLVKLFDFPG-----RGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPK 421
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 422 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 481
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 482 GIFTEQVAMGYAHSLVIARD 501
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HSIA+T+ G +YS+GSN GQLG G+ T E +P+ I +L + I A G
Sbjct: 141 QIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGY 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T++IS +G V+A+G+++FG+ G+ T+ P + +L+N V AA G F+ L+
Sbjct: 201 HTVVISKSGVVFAWGRNTFGQL--GLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G V+T G +LGH N++ P ++ L V QI+ G + LAL PS
Sbjct: 259 LDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLI 251
VY+ G G G+LG+ + P ++
Sbjct: 316 VYAWGLGGAGQLGNRASRSATTPLVV 341
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
E Q G +++ +T+ G VYS G+N GQLGH + R + I L + A G
Sbjct: 35 EVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFKKIACG 92
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 162
+ T+ +++ GQ++++G + G+ G+ +P++V++L +VQ A G +
Sbjct: 93 SCHTLAVNEWGQLFSWGCNMKGQL--GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSI 150
Query: 163 VLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
L+ +G +Y SWG++ +G HT +++P ++ TL +P+ IA G + + ++
Sbjct: 151 ALTNDGELY--SWGSNREGQLGIGSHT-VTEIKPKRII-TLAAVPIAFIACGGYHTVVIS 206
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
SG+ V++ G G+LG P + L N + A G + + DG
Sbjct: 207 --KSGV-VFAWGRNTFGQLGLNDTQQRIVPCQLRT--LRNAKVCYAACGEEFSVFLTLDG 261
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 337
V T G G YG LGHGN E +P+ V L ++ G +T +V G VY++G
Sbjct: 262 GVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 321
Query: 338 GESASLGHNA 347
G + LG+ A
Sbjct: 322 GGAGQLGNRA 331
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 143/303 (47%), Gaps = 20/303 (6%)
Query: 64 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 121
++ +GS G+LG G E+E + PR + + + Q A G T+ I++ GQVY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 180
+ +G+ + +L QL+ L + A G+ T ++ G++ FSWG + +
Sbjct: 61 NDYGQLGHEKARKRL----QLIPGLDAFVFKKIACGSCHTLAVNEWGQL--FSWGCNMKG 114
Query: 181 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
LG ++ ++ L +VQIA G + +AL + +YS G G+LG
Sbjct: 115 QLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT---NDGELYSWGSNREGQLGI 171
Query: 240 GSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 298
GS T E P+ I L + +A G +H V+ + G V WG +G LG + +
Sbjct: 172 GSHTVTEIKPKRI--ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQ 229
Query: 299 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQVC 354
VP ++ L + K + A G+ + ++ DG V++ G G LGH N I QV
Sbjct: 230 RIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVM 289
Query: 355 SLL 357
L+
Sbjct: 290 ELM 292
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++AV G ++S+G N GQLG + + E PR +++L I+Q A G ++
Sbjct: 92 GSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+++ G++Y++G + E + G+ G+ VT P+ + +L + + A G + T V+S+
Sbjct: 152 LTNDGELYSWGSNR--EGQLGI-GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208
Query: 168 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V F+WG + +LG + + P L TL N V A G + + L
Sbjct: 209 GVV--FAWGRNTFGQLGLNDTQQRIVPCQL-RTLRNAKVCYAACGEEFSVFLTLDG---G 262
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 284
V++ G G+ G+LGHG+ +E PR + +L+ ++ G H A+V GRV WG
Sbjct: 263 VFTCGAGMYGQLGHGNGMNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRVYAWG 320
Query: 285 WGRYGCLGHGNEECESVPKVV 305
G G LG+ + P VV
Sbjct: 321 LGGAGQLGNRASRSATTPLVV 341
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++ ++ GVV+++G N+ GQLG T++ P +R+L+ ++ AA G ++ ++
Sbjct: 201 HTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLD 260
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYT 172
G V+ G +G+ +G +++ P+ V L V Q + G T A++ GRVY
Sbjct: 261 GGVFTCGAGMYGQLGHGNGMNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYA 318
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLG 197
+ G +LG+ + P +LG
Sbjct: 319 WGLGGAGQLGNRASRSATTPLVVLG 343
>gi|357436203|ref|XP_003588377.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
gi|355477425|gb|AES58628.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
Length = 433
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 36/332 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRT 107
AG H++ + G VYS+G + G+LG G+ +++ P ++ S + IRI+ AAGA +
Sbjct: 19 AGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGIAAGAYHS 78
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL------------VESLKNIFVVQAA 155
+ ++D G V+ +G + +G Y V L +L VE + ++
Sbjct: 79 LALADDGSVWCWGYNLYG--YYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQLKIISIK 136
Query: 156 IGNFFTAVLSREGRVYTFSWGN---DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
G + + G ++ WGN ++ G + ++ P P+ VV++A G
Sbjct: 137 AGGMMSLSIDNLGALWM--WGNCPHQSKEGIFSIVSNFTPTPVW-DFHGHTVVKVACGNE 193
Query: 213 YLLALAC-------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-QLLNLQPVVV 264
+++AL + + YS G G+LG G D +P +++ F Q + +
Sbjct: 194 HIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDSHWSIYEI 253
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 323
A GA+H A V T+G G G LGHG + S+P++VQ L V + V G + T
Sbjct: 254 ACGAFHTAFV-----CWTFGLGENGQLGHGTTQSTSIPELVQELPQFVNLVSVDCGLFHT 308
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
VVS DGDV+S+G + L +A G+ S
Sbjct: 309 CVVSSDGDVWSWGMEKGLGLYPDARVVGEYSS 340
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 64/294 (21%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVV-YSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-- 94
+ C E+ A+ G S + ++ YS+G+N+ GQLG G TE+ P +++
Sbjct: 187 KVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDS 246
Query: 95 -IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVV 152
I + A GA T + + FG G+ +G T+ + P+LV+ L + +V
Sbjct: 247 HWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGT--TQSTSIPELVQELPQFVNLV 299
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
G F T V+S +G V+ SWG + LG + P ++ Y
Sbjct: 300 SVDCGLFHTCVVSSDGDVW--SWGMEKGLGLY------------------PDARVVGEY- 338
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVVVAAGAWHA 271
+D P ++ ++ L+PV VA GA H
Sbjct: 339 -----------------------------SSDALSPLVVSNPYEAKFLEPVQVACGAAHT 369
Query: 272 AVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
+V Q+G +V + G GR G LG+GN +P +V V+ H + ++F
Sbjct: 370 IIVAQEGYKVWSLGRGRSGVLGNGNVVDCYIPTLVLWPPLVEDFHFKQEEPSSF 423
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
++ AAG T+L++ G+VY++G+ + G G + +L + S ++I +V
Sbjct: 12 FKVTAVAAGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGI 71
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP----NDVEPHP------LLGTLE---N 201
A G + + L+ +G V+ WG + + P +E HP LL +E
Sbjct: 72 AAGAYHSLALADDGSVWC--WGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQ 129
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
+ ++ I AG +++L+ G C K G S P + F +
Sbjct: 130 LKIISIKAG--GMMSLSIDNLGALWMWGNCPHQSKEGIFSIVSNFTPTPVWDFHGHTV-- 185
Query: 262 VVVAAGAWHAAV---VGQ------DGRVC-TWGWGRYGCLGHGNEECESVPKVVQALND- 310
V VA G H VG+ D +C +WG +G LG G+ E P++V+ +
Sbjct: 186 VKVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQD 245
Query: 311 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIW 368
+A G + T V ++FG GE+ LGH + L+ Q L +
Sbjct: 246 SHWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGTTQSTSIPELV-----QELPQF 295
Query: 369 LNLSS 373
+NL S
Sbjct: 296 VNLVS 300
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 NIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
N+P V +AAG + L LA VYS G G G+LG GS D+ P ++ +
Sbjct: 9 NLPFKVTAVAAGEAHTLLLAGDGR---VYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQES 65
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
++ V +AAGA+H+ + DG V WG+ YG
Sbjct: 66 IRIVGIAAGAYHSLALADDGSVWCWGYNLYG 96
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 257 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAI 314
L + VAAG H ++ DGRV +WG G G LG G+E+ + P V+ + ++ +
Sbjct: 10 LPFKVTAVAAGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIV 69
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G Y + +++DG V+ +G
Sbjct: 70 GIAAGAYHSLALADDGSVWCWG 91
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 20/304 (6%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 105
AIA G H++ +T G VY+ G N GQLG + ++ + P+ S +II AAG
Sbjct: 70 AIACGGAHTLFLTESGCVYAAGLNDFGQLGV-SVDKNYTTEPLEVSALPKKIIHIAAGYY 128
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ I+ G++Y +GK+S G+ G + V+ P VE L I + A+G+ + +
Sbjct: 129 HSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAAT 188
Query: 166 REGRVYTFSWGNDARLGHHTEPN-------DVEPHP-LLGTLENIPVVQIAAGYCYLLAL 217
+G ++ G RLGH E + E P L+ LE I V +AAG LL
Sbjct: 189 DQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAG---LLHS 245
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
AC +V+ G K G + P +I + VA G +H V+
Sbjct: 246 ACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQ----VACGGYHTCVISSS 301
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G + TWG GCLG G E P+ ++ + V+ G T +SE G+V+++G
Sbjct: 302 GELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE-GNVFTWG 360
Query: 337 CGES 340
G S
Sbjct: 361 WGGS 364
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 19/288 (6%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 126
+G+ G+LG G+ E +WRP + ++ A G T+ ++++G VYA G + FG
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFG- 96
Query: 127 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHT 185
+ GV K T+ L S ++ A G + +A ++ +G +Y + ++ +LG
Sbjct: 97 -QLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKK 155
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--- 242
N V + L I + +A G + +A Q + S G G G+LGHG
Sbjct: 156 AANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEAL---SWGAGGSGRLGHGHESSL 212
Query: 243 ------TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
+ E PRLI + + + ++ VAAG H+A + ++G V +G G
Sbjct: 213 LGFFRTSSEYRPRLIRRLEGIKVKN--VAAGLLHSACIDENGSVFIFGERAMDKFGFREA 270
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + P ++ L K VA G Y T V+S G+++++G E+ LG
Sbjct: 271 KNATAPSMISELPYSK--QVACGGYHTCVISSSGELFTWGSNENGCLG 316
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLQGIRIIQAA 101
G HS+A T +G S+G+ SG+LGHG T E+RPR IR L+GI++ A
Sbjct: 180 GSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVA 239
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
AG + I + G V+ FG+ + ++G + K T+P ++ L + Q A G + T
Sbjct: 240 AGLLHSACIDENGSVFIFGERAM--DKFGFREAKNATAPSMISELP--YSKQVACGGYHT 295
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
V+S G ++T+ + LG P + G PV Q++ G+ + A+
Sbjct: 296 CVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI---- 351
Query: 222 SGMAVYSVGCG------------LGGKLGHGSRTDEKHPRLIE 252
S V++ G G GG+LG GS D P+++E
Sbjct: 352 SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVE 394
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 31/301 (10%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRT 107
AG HS A+T+ G +Y +G NS+GQLG G P + L GI I A G+ +
Sbjct: 125 AGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHS 184
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTS----PQLVESLKNIFVVQAAIGNFF 160
+ +D G+ ++G G +G + + L TS P+L+ L+ I V A G
Sbjct: 185 VAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLH 244
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALAC 219
+A + G V+ F + G N P + +P Q+A G + ++
Sbjct: 245 SACIDENGSVFIFGERAMDKFGFREAKNATAP----SMISELPYSKQVACGGYHTCVIS- 299
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
S +++ G G LG G P IE + PV + W +G
Sbjct: 300 --SSGELFTWGSNENGCLGMGFMETIHFPERIE--GPFSKNPVSQVSCGWKHTAAISEGN 355
Query: 280 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
V TWGW G YG LG G++ PK+V+ V+A+ V+ G T +
Sbjct: 356 VFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAIL 415
Query: 328 E 328
E
Sbjct: 416 E 416
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFS--WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+Q+ +G F LS F+ WGN RLG + + P + ++ +V
Sbjct: 12 ALQSKLGLGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRP-AVCSAFDHHSLVA 70
Query: 207 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 266
IA G + L L SG VY+ G G+LG D+ + + L + + +AA
Sbjct: 71 IACGGAHTLFLT--ESG-CVYAAGLNDFGQLG--VSVDKNYTTEPLEVSALPKKIIHIAA 125
Query: 267 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTF 324
G +H+A + DG + WG G LG G + SVP V+ LN + VA G +
Sbjct: 126 GYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSV 185
Query: 325 VVSEDGDVYSFGCGESASLGH 345
++ G+ S+G G S LGH
Sbjct: 186 AATDQGEALSWGAGGSGRLGH 206
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 12/287 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML-ISD 112
+I +T+ VY+ GSN S LG G + PR + L +I+ A G+G +L +S
Sbjct: 33 EAIYITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCKKKIVDIAFGSGPHVLAVSK 92
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 171
G++Y++G + + + G G L +P L+ + L+ +++ A G+ + LS+EG ++
Sbjct: 93 NGEMYSWGHNGYCQLGNGGSGQGL--TPTLINTNLQGKKILRVACGSHHSMALSQEGEIF 150
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ N ++G + N P ++ + N + IA G +AL VY G
Sbjct: 151 AWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALL---ENGEVYGWGY 207
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ ++ +P ++Q Q + + +V G H + +G + +WG YG L
Sbjct: 208 NGNGQLGLGNNVNQPNPCRVQQLQGVIISQLV--CGYAHTLALSDEGSLFSWGANSYGQL 265
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFG 336
G GN+ + P V +N + + +A Y + +SE G V+ +G
Sbjct: 266 GTGNKANQVSPSKV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGI 95
+ C+++ G G H +AV+ G +YS+G N QLG+G + + P I + LQG
Sbjct: 69 DVLCKKKIVDIAFGSGPHVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGK 128
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+I++ A G+ +M +S G+++A+G+++ G+ G T T ++V + N + A
Sbjct: 129 KILRVACGSHHSMALSQEGEIFAWGQNNCGQVGSG-STTNQPTPRKVVAVIGNKMALSIA 187
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYL 214
G + L G VY + + + +LG N +P+P + L+ + + Q+ GY +
Sbjct: 188 CGQTSSMALLENGEVYGWGYNGNGQLGLGNNVN--QPNPCRVQQLQGVIISQLVCGYAHT 245
Query: 215 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA--- 271
LAL+ + S ++S G G+LG G++ ++ P + +N + +V A + +A
Sbjct: 246 LALSDEGS---LFSWGANSYGQLGTGNKANQVSPSKVP----MNGERMVEIAASHYAHIS 298
Query: 272 AVVGQDGRVCTWGWGR 287
A + + G+V WG R
Sbjct: 299 AAMSETGKVFMWGQCR 314
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 92 LQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
L+ I+ I +G + I++ +VYA G + + G+ P+ V+ L
Sbjct: 18 LEKIKKICVFGSSGNEAIYITNDDEVYAIGSNC--SSCLGLGDAHSSFEPRKVDVLCKKK 75
Query: 151 VVQAAIGN-FFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+V A G+ +S+ G +Y SWG++ +LG+ + P + L+ ++++
Sbjct: 76 IVDIAFGSGPHVLAVSKNGEMY--SWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRV 133
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 267
A G + +AL+ + +++ G G++G GS T++ PR + + N + +A G
Sbjct: 134 ACGSHHSMALSQEGE---IFAWGQNNCGQVGSGSTTNQPTPRKVVAV-IGNKMALSIACG 189
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
+ + ++G V WG+ G LG GN + P VQ L V + G T +S
Sbjct: 190 QTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALS 249
Query: 328 EDGDVYSFGCGESASLG 344
++G ++S+G LG
Sbjct: 250 DEGSLFSWGANSYGQLG 266
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK------ 147
G+RI+ AAG T+ +SD GQV+ +G G+ G + +LV+SP + ++
Sbjct: 227 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSPHPIPCIEPSSYGK 285
Query: 148 ------------------NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
+V + A G +AV++ G + TF WG + G + ++
Sbjct: 286 ATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDE 345
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 249
+ P + +L I + ++AAG + + C + VYS G G+LG G E P+
Sbjct: 346 LSPT-CVSSLLGIRIEEVAAGLWHTI---CASADGDVYSFGGNQFGQLGTGCDQAETLPK 401
Query: 250 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
L+E L N+ +++ GA H AV+ +G+V WGW +YG LG G+ + P V+ +
Sbjct: 402 LLEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVIDRNAPSEVR-IK 460
Query: 310 DVKAIHVATGDYTTFVVSE 328
D ++A G + T ++ +
Sbjct: 461 DCVPKNIACGWWHTLLLGQ 479
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS +T G + +FG GQ G G+T++E P + SL GIRI + AAG T+ S
Sbjct: 316 HSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASAD 375
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY+FG + FG+ G + T P+L+E+ L+N+ V + G TAV++ EG+V+
Sbjct: 376 GDVYSFGGNQFGQLGTGCDQAE--TLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVF 433
Query: 172 TFSWGNDARLG 182
+ W +LG
Sbjct: 434 CWGWNKYGQLG 444
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 151/355 (42%), Gaps = 48/355 (13%)
Query: 33 FLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNS---SGQL-GHGTTEEEWRPRP 88
F L E C ++ A AG H +AVT VY++G +G++ G + R
Sbjct: 107 FPLPPEVCVQK----AEAGWAHCVAVTENQEVYTWGWRECIPTGRVFGQADGDSCERNIS 162
Query: 89 IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD--------SFGEAEYGVQGTKLVTS- 139
+ Q Q +G T QV A G+ S AE Q + S
Sbjct: 163 FSTEQVSPTCQGRKSSGGTSY-----QVEARGEPTKKRRISPSKQAAENASQSDNIDLSA 217
Query: 140 -PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPL-- 195
P LV + +V A G T LS G+V+ + +G + +LG + V PHP+
Sbjct: 218 LPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPC 277
Query: 196 -------------LGTLENIPVVQIAAGYCYLLALACQPSGM-----AVYSVGCGLGGKL 237
+ + ++ Y +A + S + A+ + G GL G+
Sbjct: 278 IEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQC 337
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G GS DE P + LL ++ VAAG WH DG V ++G ++G LG G ++
Sbjct: 338 GQGSTDDELSPTCVS--SLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCDQ 395
Query: 298 CESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
E++PK+++A L +V ++ G T V++++G V+ +G + LG + D
Sbjct: 396 AETLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVID 450
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 14/297 (4%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G ++ FGSN+ GQLG GT +P +++L+ R+ A G T++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
+ G +YA G ++ E + G+ TS LVE K + A G+ +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y ++ ++G E N + P + +G V ++ GY + + A+Y+
Sbjct: 162 LYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVD---GALYT 214
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G GKLG + H ++ +Q + + V VA G H + ++ V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272
Query: 289 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LGHG ES +P+VV+ + H A G+ T +++++G +Y+FG G LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 18/251 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 108
G H++ TS+G +Y+ G N+ GQLG G + + + QG I AAG+ +
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-IKMLAAGSNTSA 154
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G++Y G +S G+ G + L +PQ V K +F V + G + +A ++ +G
Sbjct: 155 ALTQDGRLYMRGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHSAFVTVDG 210
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 226
+YTF + +LG TE + H + + +IP VVQ+A G + +AL V
Sbjct: 211 ALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVALTEN----EV 264
Query: 227 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
YS G G G+LGHG+ E PR++E F+ ++ A G H A++ +G + T+G
Sbjct: 265 YSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVK--HAACGENHTALITDNGLLYTFGD 322
Query: 286 GRYGCLGHGNE 296
GR+G LG G E
Sbjct: 323 GRHGKLGLGEE 333
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 23/290 (7%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
+ G V++FG + + + W L+ ++ + G T L+++ G+++
Sbjct: 9 IPESGAVFTFGKS---KFADNAPSKFW-------LKNDVPLRISCGDEHTALVTENGKLF 58
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
FG +++G+ G + T V P V++L++ V A G T V + G +Y N
Sbjct: 59 MFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 178 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 237
+ +LG + H + + P+ +AAG AL +Y G G++
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT---QDGRLYMRGDNSEGQI 173
Query: 238 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
G G ++ P+ + + + V+ G +H+A V DG + T+G G LG E+
Sbjct: 174 GLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEK 229
Query: 298 C--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VP+ V + D + + VA G T ++E+ +VYSFG G+ LGH
Sbjct: 230 LANHKVPQQVTDIPD-RVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGH 277
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG S A+T G +Y G NS GQ+G G P+ + G R+ + G +
Sbjct: 148 AGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++ G +Y FG+ G + G+ KL PQ V + + VVQ A G T L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALT-E 261
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY+F G +LGH T + L +E+ ++ C A +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318
Query: 228 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
+ G G GKLG G T++ P L +F L+ V G H V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G GH++A+T + VYSFG GQLGHGT E R PR + + R+ AA G
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G + P L + V G VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Query: 166 R 166
+
Sbjct: 367 K 367
>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pan paniscus]
gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Gorilla gorilla gorilla]
gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
Length = 932
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 -RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 266 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
G H A V G + +G G G LG G N +C S K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|348683969|gb|EGZ23784.1| hypothetical protein PHYSODRAFT_311023 [Phytophthora sojae]
Length = 625
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 11/241 (4%)
Query: 55 SIAVTSKGV--VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 112
IA+ + V + S+G G LGHG TE PR I+ +R+ +AG +++++
Sbjct: 256 DIAMNAAAVNNLVSWGRGDYGVLGHGDTESSATPRVIKIFNSMRVTCVSAGLHHVLVLTE 315
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG---- 168
VYAFG S G+ G +L SP + SL + VV + G+ + V++ E
Sbjct: 316 LDGVYAFGDGSNGKLGLGDTNPRL--SPARITSLDGLNVVHVSAGDEHSVVMTGETFFNR 373
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+VY++ G + RLGH+ E ++P + V+ + AG + LA + P G+ V+S
Sbjct: 374 QVYSWGLGKNGRLGHNDELTRLKP-TRVNCFRGRKVITLVAGGAHNLATSEMPRGVCVWS 432
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G G+LGH D PR +++ + +++ + AG H+ + + ++ WG G +
Sbjct: 433 WGAGSYGQLGHRDTWDTLIPRSVDEIRYESIR--YIDAGQRHSLAISESKQLWLWGQGIH 490
Query: 289 G 289
G
Sbjct: 491 G 491
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 123 SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
S+G +YGV G T+ +P++++ ++ V + G VL+ VY F G++
Sbjct: 269 SWGRGDYGVLGHGDTESSATPRVIKIFNSMRVTCVSAGLHHVLVLTELDGVYAFGDGSNG 328
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS-GMAVYSVGCGLGGKLG 238
+LG + P + +L+ + VV ++AG + + + + VYS G G G+LG
Sbjct: 329 KLGLGDTNPRLSP-ARITSLDGLNVVHVSAGDEHSVVMTGETFFNRQVYSWGLGKNGRLG 387
Query: 239 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG--RYGCLGHGNE 296
H P + F+ + +VA GA + A VC W WG YG LGH +
Sbjct: 388 HNDELTRLKPTRVNCFRGRKV-ITLVAGGAHNLATSEMPRGVCVWSWGAGSYGQLGHRDT 446
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
+P+ V + ++ G + +SE ++ +G G
Sbjct: 447 WDTLIPRSVDEIRYESIRYIDAGQRHSLAISESKQLWLWGQG 488
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
Query: 93 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVES-LKNI 149
+ + + A+G T++++++ V+A G +++G GV G + ++P VE+ L ++
Sbjct: 134 RAAKFVAVASGKYHTLMLTESAVVFASGDNTYGA--LGVAGGVSASRSAPGKVETGLDDV 191
Query: 150 -----FVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPL--LGT 198
+ + +F VL V + N RL H L + T
Sbjct: 192 GGCVKMIAASGFASFALVVLPIPDPVQRPTSKGAKQNRGRLTSLERMARGRAHSLQRMST 251
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 258
+ + AA L+ S G G G LGHG PR+I+ F +
Sbjct: 252 QAKLDIAMNAAAVNNLV------------SWGRGDYGVLGHGDTESSATPRVIKIFN--S 297
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
++ V+AG H V+ + V +G G G LG G+ P + +L+ + +HV+
Sbjct: 298 MRVTCVSAGLHHVLVLTELDGVYAFGDGSNGKLGLGDTNPRLSPARITSLDGLNVVHVSA 357
Query: 319 GDYTTFVVSEDG----DVYSFGCGESASLGHN 346
GD + V++ + VYS+G G++ LGHN
Sbjct: 358 GDEHSVVMTGETFFNRQVYSWGLGKNGRLGHN 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H + +T VY+FG S+G+LG G T P I SL G+ ++ +AG +++
Sbjct: 305 AGLHHVLVLTELDGVYAFGDGSNGKLGLGDTNPRLSPARITSLDGLNVVHVSAGDEHSVV 364
Query: 110 ISDAG----QVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ QVY++G G + + T+L T K I +V N T+ +
Sbjct: 365 MTGETFFNRQVYSWGLGKNGRLGHNDELTRLKPTRVNCFRGRKVITLVAGGAHNLATSEM 424
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 218
R V+++ G+ +LGH + + P + + + I AG + LA++
Sbjct: 425 PRGVCVWSWGAGSYGQLGHRDTWDTLIPRS-VDEIRYESIRYIDAGQRHSLAIS 477
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 49 IAGPGHSIAVTS--KGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+AG H++A + +GV V+S+G+ S GQLGH T + PR + ++ I AG
Sbjct: 412 VAGGAHNLATSEMPRGVCVWSWGAGSYGQLGHRDTWDTLIPRSVDEIRYESIRYIDAGQR 471
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ IS++ Q++ +G+ G+ G V P S ++ ++ + + + +
Sbjct: 472 HSLAISESKQLWLWGQ--------GIHGDYDVPDPD-ASSSSILYPIKIELPE-LSLISA 521
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-----IPVVQIAAGYCYLLALACQ 220
R GR TF WG+ A +P P G+ + +P + + + C
Sbjct: 522 RAGRGRTFVWGDRA-------IEREKPRPFGGSAADSMCCSLPEYESLTSDSFRIIYRCG 574
Query: 221 PSGMAVYSVGC 231
P + +GC
Sbjct: 575 PCQLDAVCIGC 585
>gi|387928890|ref|ZP_10131567.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
gi|387585708|gb|EIJ78032.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
Length = 641
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 29/321 (9%)
Query: 45 NSQAIAG-PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 103
NS AI G HS++V S G+V ++G+N SGQLG GT + P + +L I+ AAG
Sbjct: 33 NSIAITGGIFHSLSVLSDGLVCAWGANYSGQLGDGTLNDSNIPEIVTALT--NAIEVAAG 90
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ + V A+G + G+ G + V P V L N + A + + +
Sbjct: 91 VFHSLALLSNSTVRAWGDNFAGQLGDGTFNSSTV--PVSVIGLTNAIAISAGLNH--SLA 146
Query: 164 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
L +G V +WG + +LG+ T+ P +LG L N VV ++AG + LAL
Sbjct: 147 LLNDGTVR--AWGGNFFGQLGNGTDITSNAPVIILG-LSN--VVAVSAGGEHSLALLYDG 201
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF---QLLNLQPVVVAAGAWHAAVVGQDG 278
+ V + G G+LG G+ TD P ++ +LN + ++AG +H+ + DG
Sbjct: 202 T---VCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLN-NVIAISAGEFHSLALLNDG 257
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ------ALNDVKAIHVATGDYTTFVVSEDGDV 332
V WG YG LG G +VP V+ LN+V AI A G + + + DG V
Sbjct: 258 TVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLNNVAAI--AAGGFHSLALLNDGTV 315
Query: 333 YSFGCGESASLGHNAIADGQV 353
++G ES LG + +D +
Sbjct: 316 LAWGNNESGQLGDGSNSDSDI 336
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ AG HS+A+ S V ++G N +GQLG GT P + L I +AG
Sbjct: 86 EVAAGVFHSLALLSNSTVRAWGDNFAGQLGDGTFNSSTVPVSVIGLT--NAIAISAGLNH 143
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + + G V A+G + FG+ G T +P ++ L N+ V A G + L
Sbjct: 144 SLALLNDGTVRAWGGNFFGQLGNGTDITS--NAPVIILGLSNVVAVSA--GGEHSLALLY 199
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-----TLENIPVVQIAAGYCYLLALACQP 221
+G V + +LG T + P + G L N V+ I+AG + LAL
Sbjct: 200 DGTVCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNN--VIAISAGEFHSLALL--- 254
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---FQLLNLQPVVVAAGAWHAAVVGQDG 278
+ V + G G+LG G+ T+ P ++ + +LN +AAG +H+ + DG
Sbjct: 255 NDGTVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLN-NVAAIAAGGFHSLALLNDG 313
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
V WG G LG G+ +P V L + I
Sbjct: 314 TVLAWGNNESGQLGDGSNSDSDIPVTVSGLTNSNTI 349
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 65 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 124
+S+G+N GQLG GT + P + I G ++ + G V A+G +
Sbjct: 4 FSWGNNEFGQLGDGTNIDSNVPVSVNG--STNSIAITGGIFHSLSVLSDGLVCAWGANYS 61
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG 182
G+ G + P++V +L N ++ A G F + L V +WG++ +LG
Sbjct: 62 GQLGDGTLNDSNI--PEIVTALTN--AIEVAAGVFHSLALLSNSTVR--AWGDNFAGQLG 115
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
T + P ++G L N + I+AG + LAL + V + G G+LG+G+
Sbjct: 116 DGTFNSSTVPVSVIG-LTN--AIAISAGLNHSLALL---NDGTVRAWGGNFFGQLGNGTD 169
Query: 243 TDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P +I L L VV V+AG H+ + DG VC WG G LG G S+
Sbjct: 170 ITSNAPVII-----LGLSNVVAVSAGGEHSLALLYDGTVCAWGANYSGQLGDGTNTDRSI 224
Query: 302 PKVVQ------ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
P V+ LN+V AI + G++ + + DG V ++G + LG + V
Sbjct: 225 PVQVKGIGGSGVLNNVIAI--SAGEFHSLALLNDGTVLAWGNNDYGQLGDGTNTESNV 280
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
M +S G G+LG G+ D P + + + + G +H+ V DG VC W
Sbjct: 1 MTTFSWGNNEFGQLGDGTNIDSNVPVSVNG----STNSIAITGGIFHSLSVLSDGLVCAW 56
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G LG G ++P++V AL + AI VA G + + + + V ++G + L
Sbjct: 57 GANYSGQLGDGTLNDSNIPEIVTALTN--AIEVAAGVFHSLALLSNSTVRAWGDNFAGQL 114
Query: 344 G 344
G
Sbjct: 115 G 115
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 11/305 (3%)
Query: 49 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAGA 104
+AG +AV + G V++ G N SGQ G+GT EE P+R+L GI I + AA G
Sbjct: 502 VAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 163
+ ++ G V+++G + G+ G +K T P++++SL+ + + AA+ +AV
Sbjct: 562 EHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHSAV 620
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+S G + TF + +LG + P ++ L + V + A G + +A S
Sbjct: 621 VSSNGELLTFGMNDCGQLGLDHTQHQHTPQ-VVDALSSQVVTKAACGLYHTVAAT---SD 676
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 282
VYS G G+LG G + K P L++ + + V V+ G +H + + G++ T
Sbjct: 677 GEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLIT 736
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
WG YG LG G++E ++ + V K + + G Y + ++ +G V FG
Sbjct: 737 WGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQ 796
Query: 343 LGHNA 347
LG A
Sbjct: 797 LGAGA 801
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 19/290 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSL-QGIRIIQAAAGAG 105
A G H +AV S G V+S+G N GQLG G+T + PR I SL + I AA
Sbjct: 557 AANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 616
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S G++ FG + G + G+ T+ +PQ+V++L + V +AA G + T +
Sbjct: 617 HSAVVSSNGELLTFGMNDCG--QLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT 674
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 223
+G VY+F + +LG N P + +L + +V ++ GY + + ++
Sbjct: 675 SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTIS---EK 731
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVC 281
+ + G G+LG GS+ + QF L + + A G +H+ ++ +GRV
Sbjct: 732 GKLITWGRNDYGQLGIGSKEHKNS----AQFVPLPMSSKIKNASCGCYHSLILMSNGRVM 787
Query: 282 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVS 327
+G G LG G S +P +L + + + +A G Y++++++
Sbjct: 788 VFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 837
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-----QVYAFGKDSFGEAEYG--VQGTKLVTSPQL 142
++ + R A AGR+ ++ ++++ G++++GE G +KL P
Sbjct: 435 KTPKAARDGSTAGEAGRSEMLPTVASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFF 494
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
S K I V A GN AV+ +G V+T + G+ T V + L I
Sbjct: 495 --SAKGIRDV--AGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGI 550
Query: 203 PVVQIAA--GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNL 259
+ +AA G ++LA+A S AV+S G G+LG GS + H PR+I+ +
Sbjct: 551 AISMVAAANGCEHMLAVA---SDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KY 606
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
A H+AVV +G + T+G G LG + + + P+VV AL+ A G
Sbjct: 607 HITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACG 666
Query: 320 DYTTFVVSEDGDVYSFGCGESASLG 344
Y T + DG+VYSFG + LG
Sbjct: 667 LYHTVAATSDGEVYSFGKNDYGQLG 691
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQAAA 102
++A G H++A TS G VYSFG N GQLG G P +++ G +I+ +
Sbjct: 661 TKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSC 720
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T+ IS+ G++ +G++ +G+ G + K S Q V + + A+ G + +
Sbjct: 721 GYYHTVTISEKGKLITWGRNDYGQLGIGSKEHK--NSAQFVPLPMSSKIKNASCGCYHSL 778
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPVVQIAAGY 211
+L GRV F N +LG PL +L N VV+IAAG+
Sbjct: 779 ILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGF 830
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 7/248 (2%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 122
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 127 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
Query: 183 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 242
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 186 SGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGNS 242
Query: 243 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 243 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300
Query: 303 KVVQALND 310
V D
Sbjct: 301 TPVTVEKD 308
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
A G M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
T VL+ EG+VY + + +LG + N P P+
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 90 RSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLK 147
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 40 EELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLN 96
Query: 148 NIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V
Sbjct: 97 GKKIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+++A G + L L S V++ G G++G GS ++ PR + L N V +
Sbjct: 155 IEVACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTI 210
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
A G V G V WG+ G LG GN + P V AL ++ VA G T
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 325 VVSEDGDVYSFGCGESASLG 344
V++++G VY++G LG
Sbjct: 271 VLTDEGQVYAWGANSYGQLG 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 115
+AV G VY +G N +GQLG G + + P + +LQGIR+ + A G T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
VYA+G +S+G+ G + + +P VE
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 150/297 (50%), Gaps = 16/297 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ + G V++FG N+ GQLG G T+ +P I+SL+ ++ Q A G T+L
Sbjct: 33 GDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHTLLA 92
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+++G++Y+FG ++ + G+ K V SP +++ L++ V + G + + VL+ +G V
Sbjct: 93 TESGKIYSFGCNNDRQLGLGLDDEK-VCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSV 151
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSV 229
Y + G + +LG DV H L+ + VV IA GY Y AL +G + +
Sbjct: 152 YLWGGGEEGQLGF---GEDVTKHETPERLDVDDEVVCIACGY-YHTALVT--AGGKLLTF 205
Query: 230 GCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 287
G GKLG GS T D P++++ + V VA G H A+ G V T+G G
Sbjct: 206 GETDEGKLGRGSDTGDNCLPKVVDGIE---GHVVSVACGGAHTVAITGW--LVYTFGNGS 260
Query: 288 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G LGHGN ++ P + K + G+ T +V++ G +++ G G L
Sbjct: 261 SGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGENHTALVTDRGQLWTCGDGRHGKL 317
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 130/252 (51%), Gaps = 13/252 (5%)
Query: 96 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+++ + G T L++ G+V+ FG +++G + G+ TK VT P ++SLK V Q A
Sbjct: 26 KVLHISCGDEHTSLLAGDGRVFTFGDNAWG--QLGLGHTKPVTKPTRIKSLKAEKVHQVA 83
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T + + G++Y+F ND +LG + V ++ LE+ V ++AG +
Sbjct: 84 CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSC 143
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 274
L + S VY G G G+LG G T + P ++ ++ + V +A G +H A+V
Sbjct: 144 VLTDKGS---VYLWGGGEEGQLGFGEDVTKHETPERLD----VDDEVVCIACGYYHTALV 196
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
G++ T+G G LG G++ ++ +PKVV + + + VA G T ++ VY
Sbjct: 197 TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAIT-GWLVY 254
Query: 334 SFGCGESASLGH 345
+FG G S LGH
Sbjct: 255 TFGNGSSGQLGH 266
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 22/258 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAG 105
Q G H++ T G +YSFG N+ QLG G +E+ P I+ L+ + +AG
Sbjct: 81 QVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMY 140
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +++D G VY +G G+ +G TK T +L + VV A G + TA+++
Sbjct: 141 HSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE---VVCIACGYYHTALVT 197
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G++ TF ++ +LG ++ D ++ +E VV +A G + +A+ +G
Sbjct: 198 AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACGGAHTVAI----TGWL 252
Query: 226 VYSVGCGLGGKLGHGS---RTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGR 279
VY+ G G G+LGHG+ + D H +++ Q +P V + G H A+V G+
Sbjct: 253 VYTFGNGSSGQLGHGNMLLQADTPH-KIVWQ------KPTKVRSASCGENHTALVTDRGQ 305
Query: 280 VCTWGWGRYGCLGHGNEE 297
+ T G GR+G L G E
Sbjct: 306 LWTCGDGRHGKLALGEEN 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F + + + ++ G H +++ DGRV T+G +G LG G+ + + P +++L K
Sbjct: 19 KFWIREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEK 78
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
VA G T + +E G +YSFGC LG + D +VCS
Sbjct: 79 VHQVACGRSHTLLATESGKIYSFGCNNDRQLGL-GLDDEKVCS 120
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 24/294 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 111
H+ A+ S G V+++G N GQLG GT + RP P++ L G+ I A G ++ +
Sbjct: 459 HTAALRSDGTVWTWGMNRFGQLGEGTVTD--RPTPVQVVGLGGVTAI--ATGDNHSLALR 514
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G V+A+G + +G+ G + P L NI + A G + L +G V+
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVDR--RQPVQASGLSNIVAI--AAGGSHSLALRSDGTVW 570
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
F + D +LG+ T + P +G VV +AAG Y LAL + V++ G
Sbjct: 571 AFGYNFDGQLGNGTRTWTLVPVQAVGLSS---VVSLAAGSLYSLALRADGT---VWAWGY 624
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG G+ P Q+ L + +AAG++H+ + DG V WG+ G
Sbjct: 625 NASGQLGVGTTQGSAQP-----LQVPGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQ 679
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG+G P +V +++ A+ + GD + + DG V+++G LG
Sbjct: 680 LGNGTSTPRLSPGLVAGMSN--AVAIIAGDQHSLAMKADGTVWAWGLNIKGQLG 731
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+ A +G H++ + + G ++++G N GQLG+GT ++ P P+ +I A+G
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTD---VISVASGYR 458
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T + G V+ +G + FG+ G + P V+ + V A G+ + L
Sbjct: 459 HTAALRSDGTVWTWGMNRFGQLGEGT----VTDRPTPVQVVGLGGVTAIATGDNHSLALR 514
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G V+ + + +LG T + +P G L NI V IAAG + LAL +
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVDRRQPVQASG-LSNI--VAIAAGGSHSLALRSDGT--- 568
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG+G+RT P Q + L VV +AAG+ ++ + DG V WG
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTLVP-----VQAVGLSSVVSLAAGSLYSLALRADGTVWAWG 623
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ G LG G + + P V L+ + +I A G Y + + DG V+++G LG
Sbjct: 624 YNASGQLGVGTTQGSAQPLQVPGLSGITSI--AAGSYHSLALRSDGWVWAWGFNFEGQLG 681
Query: 345 H 345
+
Sbjct: 682 N 682
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 21/292 (7%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV S G V+++G N GQLG GT+ ++ P + L ++ AAG ++ +
Sbjct: 61 HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL--TQVTSVAAGDQYSLALDAD 118
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G ++ G+ G ++L+ PQ V +L N VV A G L +G V+ +
Sbjct: 119 GAVWAWGDNASGQLGDGTLTSRLL--PQRVSALSN--VVSLASGFAHVLALRADGTVWAW 174
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
+ +LG T P + G VV + AG LAL + +++ G
Sbjct: 175 GDNRNNQLGDGTLTRSSVPLQVPGLSG---VVAVVAGGSSSLALRADGT---LWAWGDNR 228
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
G+LG G+ R I Q+ +L V V+ GA+HA + DG V WG YG LG
Sbjct: 229 YGQLGDGTTV-----RRITPVQVASLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLG 283
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G + P V +L DV+ + G+Y + V DG V+++G LG
Sbjct: 284 DGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTDGAVWAWGDNRYRQLG 332
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
AIA G HS+A+ S G V+++G N GQLG GT + R +P+++ I+ AAG
Sbjct: 502 AIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD--RRQPVQASGLSNIVAIAAGGSH 559
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G V+AFG + G+ G + LV V+++ VV A G+ ++ L
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGNGTRTWTLVP----VQAVGLSSVVSLAAGSLYSLALRA 615
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
+G V+ + + +LG T +P + G L I IAAG + LAL S V
Sbjct: 616 DGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-LSGI--TSIAAGSYHSLALR---SDGWV 669
Query: 227 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 286
++ G G+LG+G+ T P L+ V + AG H+ + DG V WG
Sbjct: 670 WAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGLN 725
Query: 287 RYGCLGHGNEECESVPKVVQALN 309
G LG G+ P VQ ++
Sbjct: 726 IKGQLGTGDTTEAWFPVQVQGIH 748
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 143/303 (47%), Gaps = 22/303 (7%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 108
+AG S+A+ + G ++++G N GQLG GTT P + SL ++ + GA +
Sbjct: 206 VAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLD--SVVSVSVGAYHAL 263
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G +++G+ G + T P V SL ++ + A GN+ + + +G
Sbjct: 264 ALRADGTVWAWGHNAYGQLGDGTNTQR--TQPVSV-SLTDVRTLVA--GNYHSLAVRTDG 318
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ +WG++ T P PL + V + AGY + +AL + +S
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSPLPLQAGMTG--GVTLVAGYRHSVALGADGT---AWS 371
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G + G+LG PR+ Q L L +G H ++G +GR+ WG +
Sbjct: 372 WGDNVFGQLGD----TTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQ 427
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG+G ++ S+P V L DV I VA+G T + DG V+++G LG
Sbjct: 428 QGQLGNGTQQDSSLPLPVN-LTDV--ISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGT 484
Query: 348 IAD 350
+ D
Sbjct: 485 VTD 487
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 26/300 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
H++A+ + G V+++G N+ GQLG GT + +P + SL +R + AG ++ +
Sbjct: 261 HALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTD 317
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + + + G L +SP +++ V A G + L +G +
Sbjct: 318 GAVWAWGDNRYRQLGTG----NLTSSPLPLQAGMTGGVTLVA-GYRHSVALGADGTAW-- 370
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
SWG++ +LG T + P + G + +G + + L +++ G
Sbjct: 371 SWGDNVFGQLGDTTFEPRMAPVQVSGLA--LGRADATSGQLHTVMLGANGR---LWAWGD 425
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 290
G+LG+G++ D P + NL V+ VA+G H A + DG V TWG R+G
Sbjct: 426 NQQGQLGNGTQQDSSLPLPV------NLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQ 479
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
LG G P V L V AI ATGD + + +G V+++G LG D
Sbjct: 480 LGEGTVTDRPTPVQVVGLGGVTAI--ATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD 537
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 37 GEACCRRENSQA---------IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
G A RR+ QA AG HS+A+ S G V++FG N GQLG+GT W
Sbjct: 533 GTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTLV 590
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
P++++ ++ AAG+ ++ + G V+A+G ++ G + GV T+ P V L
Sbjct: 591 PVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASG--QLGVGTTQGSAQPLQVPGLS 648
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
I + A G++ + L +G V+ + + + +LG+ T + P L+ + N V I
Sbjct: 649 GITSI--AAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG-LVAGMSN--AVAI 703
Query: 208 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 252
AG + LA+ + V++ G + G+LG G T+ P ++
Sbjct: 704 IAGDQHSLAMKADGT---VWAWGLNIKGQLGTGDTTEAWFPVQVQ 745
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 42/298 (14%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG +S+A+ + G V+++G N+SGQLG GT P+ + +L ++ A+G +
Sbjct: 107 AGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSALS--NVVSLASGFAHVLA 164
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + + G V P V L + V A G + L +G
Sbjct: 165 LRADGTVWAWGDNRNNQLGDGTLTRSSV--PLQVPGLSGVVAVVA--GGSSSLALRADGT 220
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAA---------GYCYLLALA 218
++ +WG++ +LG T T+ I VQ+A+ G + LAL
Sbjct: 221 LW--AWGDNRYGQLGDGT------------TVRRITPVQVASLDSVVSVSVGAYHALALR 266
Query: 219 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+ V++ G G+LG G+ T P + L +++ +V AG +H+ V DG
Sbjct: 267 ADGT---VWAWGHNAYGQLGDGTNTQRTQPVSVS---LTDVRTLV--AGNYHSLAVRTDG 318
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V WG RY LG GN +P +QA + + G + + DG +S+G
Sbjct: 319 AVWAWGDNRYRQLGTGNLTSSPLP--LQA-GMTGGVTLVAGYRHSVALGADGTAWSWG 373
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
V+ A+G + + + +G V+ + + +LG T + P + G + V +AAG
Sbjct: 53 VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ---VTSVAAGD 109
Query: 212 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 271
Y LAL AV++ G G+LG G+ T P+ + + V +A+G H
Sbjct: 110 QYSLALDADG---AVWAWGDNASGQLGDGTLTSRLLPQRVSALSNV----VSLASGFAHV 162
Query: 272 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ DG V WG R LG G SVP V L+ V + V G ++ + DG
Sbjct: 163 LALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGV--VAVVAGGSSSLALRADGT 220
Query: 332 VYSFGCGESASLGHNA----IADGQVCSL 356
++++G LG I QV SL
Sbjct: 221 LWAWGDNRYGQLGDGTTVRRITPVQVASL 249
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
L PV +A G +H+ V DG V WG+ R G LG G ++ P V L V + VA
Sbjct: 50 LPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQVTS--VAA 107
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
GD + + DG V+++G S LG DG + S L
Sbjct: 108 GDQYSLALDADGAVWAWGDNASGQLG-----DGTLTSRLL 142
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 145/317 (45%), Gaps = 25/317 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V+++G NS GQLG GTT RP P++ ++ +AG ++
Sbjct: 353 AGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIP--RPSPVQVPDLTDVVALSAGDSHSLA 410
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V A+G + G+ G +L SP V L ++ + A G T L G
Sbjct: 411 LRTDGTVRAWGVNYSGQLGDGTTTHRL--SPVQVPDLTDVVALSA--GGNHTLALRTNGT 466
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +D +LG T + P +LG L N VV ++AGY + LA+ + V++
Sbjct: 467 VWAWGSNSDGQLGDGTTTPRLSPVQMLG-LTN--VVALSAGYYHSLAVHTDGT---VWAW 520
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ T P Q+ L VV ++AG H+ + DG V WG
Sbjct: 521 GSNSDGQLGDGTTTHRLTP-----VQVPGLTDVVALSAGDSHSLALRTDGTVWAWGSNSS 575
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
LG G P V L DV A+ + G + + DG V+++G LG
Sbjct: 576 SQLGDGTTTPRGSPVQVPGLTDVVAL--SAGGAHSLALRTDGTVWAWGSNYYGQLG---- 629
Query: 349 ADGQVCSLLFLSIFQYL 365
DG LF + L
Sbjct: 630 -DGTTTPRLFPVLVSNL 645
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 141/296 (47%), Gaps = 20/296 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V+++GSNSSGQLG GTT P + L ++ +AG +
Sbjct: 3 AGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL--TDVVALSAGNHHCLA 60
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +S G+ G +L S V L ++ + A G+ +T L +G
Sbjct: 61 LRTDGTVWAWGSNSSGQLGDGTTTPRL--SSVQVPGLTDVVALSA--GSSYTLALRTDGT 116
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + +LG T + P + G + VV +++G + LAL + V++
Sbjct: 117 VWAWGYNFYGQLGDGTTTPRLAPVQVPGLTD---VVALSSGIYHSLALRTDGT---VWAW 170
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+ T R + Q+ L VV ++AG +H+ V DG V WG
Sbjct: 171 GDNASGQLGDGTAT-----RRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFS 225
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG G P V L +V A+ + D T + DG V+++G LG
Sbjct: 226 GQLGDGTATPRLSPVQVSGLTNVVAL--SADDSYTLALRTDGTVWAWGYNSYGQLG 279
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V ++G N SGQLG GTT P + L ++ +AG T+
Sbjct: 403 AGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDL--TDVVALSAGGNHTLA 460
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G +S G+ G +L SP + L N+ + A G + + + +G
Sbjct: 461 LRTNGTVWAWGSNSDGQLGDGTTTPRL--SPVQMLGLTNVVALSA--GYYHSLAVHTDGT 516
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + +D +LG T + + P + G + VV ++AG + LAL + V++
Sbjct: 517 VWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD---VVALSAGDSHSLALRTDGT---VWAW 570
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 288
G +LG G+ T P Q+ L VV ++AG H+ + DG V WG Y
Sbjct: 571 GSNSSSQLGDGTTTPRGSP-----VQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYY 625
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LG G P +V L ++ G + + DG ++G LG
Sbjct: 626 GQLGDGTTTPRLFPVLVSNLTGTSNLYAGAGH--SLALRTDGTGRAWGNNYGGQLGDGTS 683
Query: 349 A 349
A
Sbjct: 684 A 684
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 22/298 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG H +A+ + G V+++GSNSSGQLG GTT + L ++ +AG+ T+
Sbjct: 53 AGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGL--TDVVALSAGSSYTLA 110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ G +L +P V L ++ + + I + + L +G
Sbjct: 111 LRTDGTVWAWGYNFYGQLGDGTTTPRL--APVQVPGLTDVVALSSGI--YHSLALRTDGT 166
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
V+ +WG++A +LG T + P + G + VV ++AG + LA+ + V+
Sbjct: 167 VW--AWGDNASGQLGDGTATRRLSPVQVPGLTD---VVALSAGGYHSLAVRTDGT---VW 218
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
+ G G+LG G+ T P ++ L N+ V ++A + + DG V WG+
Sbjct: 219 AWGSNFSGQLGDGTATPRLSP--VQVSGLTNV--VALSADDSYTLALRTDGTVWAWGYNS 274
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
YG LG G P V L +V A+ + G + + DG V+++G + LG+
Sbjct: 275 YGQLGDGTTTPRLSPVQVPGLTNVVAL--SAGYSHSLALRTDGTVWAWGYNYNGQLGN 330
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 141/340 (41%), Gaps = 66/340 (19%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG------------------- 94
+++A+ + G V+++G NS GQLG GTT P + L
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVVALSAGYSHSLALRTDGT 316
Query: 95 -----------------------------IRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 125
I ++ +AG ++ + G V+A+G +S G
Sbjct: 317 VWAWGYNYNGQLGNGIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLG 376
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ G T SP V L ++ + A G+ + L +G V + +LG T
Sbjct: 377 QLGDGT--TIPRPSPVQVPDLTDVVALSA--GDSHSLALRTDGTVRAWGVNYSGQLGDGT 432
Query: 186 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 245
+ + P + + VV ++AG + LAL + V++ G G+LG G+ T
Sbjct: 433 TTHRLSP---VQVPDLTDVVALSAGGNHTLALRTNGT---VWAWGSNSDGQLGDGTTT-- 484
Query: 246 KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
PRL Q+L L VV ++AG +H+ V DG V WG G LG G P
Sbjct: 485 --PRL-SPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQ 541
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
V L DV A+ + GD + + DG V+++G S+ LG
Sbjct: 542 VPGLTDVVAL--SAGDSHSLALRTDGTVWAWGSNSSSQLG 579
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 26/249 (10%)
Query: 101 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
AAG ++ + G V+A+G +S G+ G T SP V L ++ + A GN
Sbjct: 2 AAGYSHSLALHTDGTVWAWGSNSSGQLGDGT--TTPRGSPVQVPGLTDVVALSA--GNHH 57
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLA 216
L +G V+ + + +LG T P L +++ +P VV ++AG Y LA
Sbjct: 58 CLALRTDGTVWAWGSNSSGQLGDGTT------TPRLSSVQ-VPGLTDVVALSAGSSYTLA 110
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 275
L + V++ G G+LG G+ T PRL Q+ L VV +++G +H+ +
Sbjct: 111 LRTDGT---VWAWGYNFYGQLGDGTTT----PRL-APVQVPGLTDVVALSSGIYHSLALR 162
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG G LG G P V L DV A+ + G Y + V DG V+++
Sbjct: 163 TDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVAL--SAGGYHSLAVRTDGTVWAW 220
Query: 336 GCGESASLG 344
G S LG
Sbjct: 221 GSNFSGQLG 229
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+AV + G V+++GSNS GQLG GTT P + L ++ +AG ++ +
Sbjct: 507 HSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL--TDVVALSAGDSHSLALRTD 564
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G +S ++ G T SP V L ++ + A G + L +G V+
Sbjct: 565 GTVWAWGSNS--SSQLGDGTTTPRGSPVQVPGLTDVVALSA--GGAHSLALRTDGTVW-- 618
Query: 174 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+WG++ +LG T + P L+ L + AG+ LAL +G A G
Sbjct: 619 AWGSNYYGQLGDGTTTPRLFPV-LVSNLTGTSNLYAGAGHS--LALRTDGTGRA---WGN 672
Query: 232 GLGGKLGHGSRTDEKHP 248
GG+LG G+ HP
Sbjct: 673 NYGGQLGDGTSAFFLHP 689
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+AAG H+ + DG V WG G LG G P V L DV A+ + G++
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDVVAL--SAGNHHC 58
Query: 324 FVVSEDGDVYSFGCGESASLG 344
+ DG V+++G S LG
Sbjct: 59 LALRTDGTVWAWGSNSSGQLG 79
>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Papio anubis]
Length = 932
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 -RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 266 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
G H A V G + +G G G LG G N +C S K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Nomascus leucogenys]
Length = 932
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 195
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 196 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 255
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 -RSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 256 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 315 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 205
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 206 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 265
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 266 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 303
G H A V G + +G G G LG G N +C S K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 253
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 254 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 313
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 21/338 (6%)
Query: 44 ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQ 99
EN Q I G HS+A+T+ G ++ +G N+ GQLG + PR ++SL GI + Q
Sbjct: 116 ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQ 175
Query: 100 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+AG + ++S +G V+ +G +S G+ G + V P +V SLK +V + G
Sbjct: 176 ISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV--PTVVNSLKRKKIVSISCGGE 233
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
TA L++ G V+TF G +LGH++ ++ P L+ L V Q+ G + L
Sbjct: 234 HTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPR-LVAELWGSKVSQVTCGRNHTLVSTA 292
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN----LQPVVVAAGAWHAAVVG 275
P +YS GCG+ G+LG+G + + P ++Q N +Q +V A
Sbjct: 293 SPK--LIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFALYFK 350
Query: 276 QDGRVCTWGWGRYGCLGHGN---EECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGD 331
+ G R G + N E+CE +A+ D+K + + +F+ +
Sbjct: 351 ELGNEANPDPTR-GIMTFDNGMIEQCECGKDPRKAIKDLKKVFSSAASLNGSFLKTRHDG 409
Query: 332 VYSFG---CGESASLGHNAIADGQVCSLLFLSIFQYLQ 366
Y CG L ++IA L ++ + LQ
Sbjct: 410 HYQTSEEYCGLDFGLVESSIATLSRNERLISTVLKVLQ 447
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 31/256 (12%)
Query: 95 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
IR+I G +L+ D G+V K + SP ++ L+N V+Q
Sbjct: 81 IRLI--VCGEYGAVLLDDGGKVLIMDKST-------------ECSP--LKGLENRQVIQI 123
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG-- 210
A G+ + L+ +G++ F WG +A +LG E + L +L IPV QI+AG
Sbjct: 124 ACGDQHSMALTNDGQL--FVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGN 181
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ ++L+L SG+ V+ G G+LG G TD P ++ + + V ++ G H
Sbjct: 182 HSFVLSL----SGV-VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKI--VSISCGGEH 234
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
A + + G V T+G G +G LGH + + E P++V L K V G T V +
Sbjct: 235 TAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASP 294
Query: 331 D-VYSFGCGESASLGH 345
+YSFGCG LG+
Sbjct: 295 KLIYSFGCGMQGQLGN 310
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESL 146
P++ L+ ++IQ A G +M +++ GQ++ +G+++ G + G++ + T SP+ ++SL
Sbjct: 111 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALG--QLGLRKEQAGTQSPRHLQSL 168
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 204
I V Q + G + VLS G V F WG ++ +LG + P ++ +L+ +
Sbjct: 169 CGIPVAQISAGGNHSFVLSLSGVV--FGWGGNSAGQLGLGDTTDRFVP-TVVNSLKRKKI 225
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
V I+ G + ALA G V++ G G G+LGH S DE HPRL+ +L + V
Sbjct: 226 VSISCGGEHTAALA---KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVA--ELWGSKVSQV 280
Query: 265 AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVP 302
G H V + + ++G G G LG+G + +SVP
Sbjct: 281 TCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHP 248
E PL G LEN V+QIA G + +AL + ++ G G+LG + + P
Sbjct: 107 TECSPLKG-LENRQVIQIACGDQHSMALT---NDGQLFVWGENALGQLGLRKEQAGTQSP 162
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
R ++ L + ++AG H+ V+ G V WG G LG G+ VP VV +L
Sbjct: 163 RHLQS--LCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSL 220
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
K + ++ G T +++ G V++FG G LGHN+ D
Sbjct: 221 KRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKD 262
>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 49/331 (14%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ P+ I +L ++ AA G T+ +++
Sbjct: 135 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEG 194
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G Y+FG++ G+ G Q T V SP L++ +V+ A G F+ V+ +G +Y+F
Sbjct: 195 GTAYSFGENKLGQLGQGNQ-TDAVLSPALIQ-YNGQPLVKVACGAEFSMVVDCKGNLYSF 252
Query: 174 SWGNDARLGHHTE-----------------------------PNDVEPHPLLGTLENIPV 204
+LGH+++ V P P N+ V
Sbjct: 253 GCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVP------NVVV 306
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
+A G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 307 RDVACGGNHTLILDSQKR---VFSWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQI 363
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
G + V + G + WG + + + E PK VQ L K +A G +
Sbjct: 364 YTGYQCSFAVNEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIV 417
Query: 325 VVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++D + G S + G D + S
Sbjct: 418 IAADDS---TISWGPSPTFGELGYGDNKAKS 445
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 30/257 (11%)
Query: 104 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
A ++LI+ G+++++G++ G+ +G TK + +P+L+E+L + VV AA G T
Sbjct: 133 AAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRLEAPKLIEALADEVVVAAACGRNHTLA 190
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
L+ G Y+F +LG + D P L P+V++A G + + + C+ +
Sbjct: 191 LTEGGTAYSFGENKLGQLGQGNQ-TDAVLSPALIQYNGQPLVKVACGAEFSMVVDCKGN- 248
Query: 224 MAVYSVGCGLGGKLGHGSRTD------------EKHPR----LIEQFQLLNLQPVV---- 263
+YS GC G+LGH S E R IE+ + + PV
Sbjct: 249 --LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVV 306
Query: 264 --VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATG 319
VA G H ++ RV +WG+G YG LGH ++ E VP++V+ + A + TG
Sbjct: 307 RDVACGGNHTLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQIYTG 366
Query: 320 DYTTFVVSEDGDVYSFG 336
+F V+E G ++ +G
Sbjct: 367 YQCSFAVNEMGGLFFWG 383
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 126/301 (41%), Gaps = 44/301 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 107
A G H++A+T G YSFG N GQLG G + + G +++ A GA +
Sbjct: 181 AACGRNHTLALTEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFS 240
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE----------------------- 144
M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 241 MVVDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEFDCETIARRVAIFIEKSKDGQVT 299
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP- 203
+ N+ V A G T +L + RV+++ +G RLG HTE D E P L L + P
Sbjct: 300 PVPNVVVRDVACGGNHTLILDSQKRVFSWGFGGYGRLG-HTEQKD-EMVPRLVKLFDFPG 357
Query: 204 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 261
QI GY C AV +G + + SR +P+ ++ L +
Sbjct: 358 RGASQIYTGY------QCS---FAVNEMGGLFFWGVTNTSRESTMYPKAVQ--DLCGWKV 406
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVAT 318
+A G + V+ D +WG +G LG+G+ + +S + V+ L+ V V
Sbjct: 407 RSLACGK-SSIVIAADDSTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGVYTEQVVM 465
Query: 319 G 319
G
Sbjct: 466 G 466
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 285
++S G G+LGHG + P+LIE L + V A G H + + G ++G
Sbjct: 145 LWSWGRNEKGQLGHGDTKRLEAPKLIEA--LADEVVVAAACGRNHTLALTEGGTAYSFGE 202
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ G LG GN+ + + N + VA G + VV G++YSFGC E LGH
Sbjct: 203 NKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGH 262
Query: 346 NA----IADGQVCSLLFLSIFQYLQIWLNLSS 373
N+ IA Q +I + + I++ S
Sbjct: 263 NSDGKFIARAQRIEFDCETIARRVAIFIEKSK 294
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 268 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
A H+ ++ +G++ +WG G LGHG+ + PK+++AL D + A G T ++
Sbjct: 133 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALT 192
Query: 328 EDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQY 364
E G YSFG + LG D ++L ++ QY
Sbjct: 193 EGGTAYSFGENKLGQLGQGNQTD----AVLSPALIQY 225
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ G S AV G ++ +G ++ + E P+
Sbjct: 348 RLVKLFDFPG-----RGASQIYTGYQCSFAVNEMGGLFFWGVTNTSR------ESTMYPK 396
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G ++ A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 397 AVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 456
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
++ Q +G V+ R+
Sbjct: 457 GVYTEQVVMGYAHCLVIVRQ 476
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 39/329 (11%)
Query: 49 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 127 VSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNH 186
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+ +++ G VY FG++ G+ G Q T V SP ++ +V+ A G F+ ++
Sbjct: 187 TLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDC 244
Query: 167 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 203
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 245 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVV 304
Query: 204 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 263
+A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 305 ARDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQ 361
Query: 264 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 323
+ G + + + G + WG + + + E PK VQ L K +A G +
Sbjct: 362 IYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 415
Query: 324 FVVSEDGDVYSFGCGESASLGHNAIADGQ 352
V ++D + G S + G D +
Sbjct: 416 IVAADDS---TISWGPSPTFGELGYGDNK 441
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ + +LGH P + G E + +V A G + LAL
Sbjct: 137 IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALT---E 192
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 281
VY+ G G+LG G++TD Q+ N QP+V VA GA + +V G +
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQY---NGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 282 TWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHVA 317
++G YG LGH ++ +CE +P+ V + +V A VA
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
G T V+ V+S+G G LGH D V L+ L F
Sbjct: 310 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 354
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q G S A++ G ++ +G ++ + E P+
Sbjct: 347 RLVKLFDFPG-----RGATQIYCGYQCSFALSEMGGLFFWGVTNT------SRESTMYPK 395
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G +I A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 396 AVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLD 455
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
++ Q +G + V++R+
Sbjct: 456 GVYSEQVVMGYSHSLVIARQ 475
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G P+ + L G+ + Q +AG
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G VY++GK+ FG + G+ T+ SP L+E+L N V A G +A+L+
Sbjct: 201 HSMALSMSGNVYSWGKNEFG--QLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDLG--K 315
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G D+ P
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIP 338
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 86 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+ I+ + ++I GA +++S G+ + E +Y + K + S +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQE 136
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 202
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L +
Sbjct: 137 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAGV 190
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+ QI+AG + +AL+ SG VYS G G+LG G + P LIE L N +
Sbjct: 191 PLAQISAGEAHSMALSM--SG-NVYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+A G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 305
Query: 323 TFV-VSEDGDVYSFGCGESASLGHNAIAD 350
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 TLAYVSDLGKVFSFGSGKDGQLGNGGTLD 334
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 81 EEEWRPRPIRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 137
E ++ + +RS LQ +IIQ G ++ +S G+++A+G++ G+ G +
Sbjct: 120 EYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-T 178
Query: 138 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHP 194
T+PQ+VE L + + Q + G + LS G VY SWG + +LG HTE D
Sbjct: 179 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVY--SWGKNEFGQLGLGHTESKDSPS-- 234
Query: 195 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
L+ L+N V +A G + AL Q G+ +++ G G G+LGH S +E P L+ +
Sbjct: 235 LIEALDNQKVEFLACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE- 290
Query: 255 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
L+ + +A G WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 291 -LVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 139 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
+P+ ++ KN+ + G +LS +G+ + + + H +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYS-----MKHLRSESI-------- 133
Query: 199 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 257
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++E L
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 188
Query: 258 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 317
+ ++AG H+ + G V +WG +G LG G+ E + P +++AL++ K +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
G + ++++DG +++FG G+ LGHN+ +
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQN 281
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
+Q AG HS+A++ G VYS+G N GQLG G TE + P I +L ++ A G
Sbjct: 193 AQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
+ L++ G ++ FG G + G T+ P LV L V Q A G + T A +
Sbjct: 253 HSALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G D +LG+ + + P P+
Sbjct: 311 SDLGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAY 309
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P V S
Sbjct: 310 VSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSS 345
>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
cuniculus]
Length = 560
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 199 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 258
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ + +G +Y+F
Sbjct: 259 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMITDCKGNLYSF 316
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 317 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 376
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 377 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 433
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 434 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 486
Query: 331 DVYSFG 336
S+G
Sbjct: 487 STISWG 492
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 245 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 303
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M+ G +Y+FG +G+ + G K + Q +E
Sbjct: 304 SMITDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 362
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 363 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 420
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 421 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 471
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 472 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 528
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 529 MGYSHSLVIARD 540
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 177 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 234
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 235 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 290
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ I +A G + + G++YSFGC E LGHN+
Sbjct: 291 GQPITKMACGAEFSMITDCKGNLYSFGCPEYGQLGHNS 328
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 202 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 260
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + + G +
Sbjct: 261 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMITDCKGNL 313
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 314 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 373
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 374 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 419
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 412 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 460
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 461 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 520
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
IF Q A+G + V++R+
Sbjct: 521 GIFSEQVAMGYSHSLVIARD 540
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 21/322 (6%)
Query: 3 QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG 62
Q++ I KP+ ++ G W L L + + C R+ +I T
Sbjct: 42 QRQRICKPVIACTKRSTDMVDFGKWPL-FALLSSQDLSCIRQACVFGCSANEAIYTTQNN 100
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 121
V+ FG N S LG G + PR + L G +I+ + G+G +L ++ G+VY++G
Sbjct: 101 EVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGH 160
Query: 122 DSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ + + G +QGT T Q+ L + V+Q A G+ + L+ +G V+++ + N
Sbjct: 161 NGYSQLGNGNTIQGT---TPVQVCMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCG 217
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
++G T N P + +L++ VV I+AG +AL VY G G+LG
Sbjct: 218 QVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALT---DNGHVYGWGYNGTGQLGL 274
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 296
G+ ++ P +L+ QP+ V G H + G + WG +G LG GN+
Sbjct: 275 GNTGNQLMP-----CRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNK 329
Query: 297 ECESVPKVV---QALNDVKAIH 315
++VP V + + +V A H
Sbjct: 330 SNQTVPVKVGTNERMVEVTACH 351
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAG 105
Q G HS+A+TS G V+S+G N+ GQ+G GTT + PR + SLQ ++ +AG
Sbjct: 191 QVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQT 250
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M ++D G VY +G + G+ G G +L+ P + + I ++Q +G T LS
Sbjct: 251 SSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFAQPICIIQVVLGYAHTLALS 308
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
+G +Y + + +LG + N P +GT E + V++ A + ++ A +
Sbjct: 309 DQGVLYAWGANSHGQLGIGNKSNQTVPVK-VGTNERM--VEVTACHSTNISAA-KSQSEQ 364
Query: 226 VYSVG-----CGLGGKLGHGSRTDE 245
VY G C L L H + TD+
Sbjct: 365 VYMWGLCRGQCLLSPHLTHFTCTDD 389
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 276
L C G VYS G +LG+G+ P + +LL+ + + VA G+ H+ +
Sbjct: 147 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTPVQV-CMELLSKKVIQVACGSHHSMALTS 204
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V +WG+ G +G G +SVP KV +L + ++ G ++ ++++G VY +
Sbjct: 205 DGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGW 264
Query: 336 GCGESASLGHNAIADGQV-CSLLFLSIFQYLQIWL 369
G + LG + + C L+F +Q+ L
Sbjct: 265 GYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVL 299
>gi|115461118|ref|NP_001054159.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|113565730|dbj|BAF16073.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|222629715|gb|EEE61847.1| hypothetical protein OsJ_16512 [Oryza sativa Japonica Group]
Length = 549
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 39/273 (14%)
Query: 31 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
+RF+ +G C H +A+ ++G Y++G N GQLGHG T + P +
Sbjct: 70 IRFVASGCTAC------------HCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVS 117
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ--LVESLKN 148
L ++I+A+ G T++++D G+ ++FG + G+ G ++ TSP LV N
Sbjct: 118 ELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATN 177
Query: 149 IFVVQAAIGNFFTAVLSR-EGR-VYTFSWGNDARLGHHTEPN------------DVEPHP 194
A G FT LS EG + T +LGH T+ D +P P
Sbjct: 178 -----AVCGADFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRP 232
Query: 195 -LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ +L +V+ A G + +A+ S VY+ G G G+LGH + DE PRL+E
Sbjct: 233 RAIASLSGKTIVKAACGTNHTVAV---DSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEV 289
Query: 254 FQLLNLQP--VVVAAGAWHAAVVGQDGRVCTWG 284
FQ N+ P +++AGA +A G++ WG
Sbjct: 290 FQKHNVLPPNAIISAGAASSACTAGGGQLYMWG 322
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
+G K+ G++ + P + ++++ V A H + +GR TWG G LG
Sbjct: 44 MGRKVVGGAQGNLVSPTRMRSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLG 103
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
HG+ ++P VV L+ K I + G T VV++DG +SFG + LG ++
Sbjct: 104 HGDTLQRNLPTVVSELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSL 159
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 39/274 (14%)
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAI 156
+ AAG+G +L A G+ G G QG + SP + SL +I V +
Sbjct: 24 KDAAGSGGELLYCGATNFETMGRKVVG----GAQGN--LVSPTRMRSLMGVDIRFVASGC 77
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
L EGR YT+ +LGH P ++ L V++ + G + +
Sbjct: 78 TACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLP-TVVSELSKYKVIKASVGRNHTVV 136
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL--LNLQPVVVAAGA----WH 270
+ +S G G+LG GS +E IE + L + GA W
Sbjct: 137 VT---DDGKSFSFGHNKHGQLGTGSLRNE-----IETSPMPCLVTEATNAVCGADFTVWL 188
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNE--------------ECESVPKVVQALNDVKAIHV 316
++V G + T G +YG LGHG + + + P+ + +L+ +
Sbjct: 189 SSVEGS--TILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVKA 246
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
A G T V G VY++G G LGH D
Sbjct: 247 ACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKD 280
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 83/298 (27%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G HS VT +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G VYA G + E + G+ T+ T+ L+ + Q + G+ +A L+ +GR
Sbjct: 103 TEGGNVYATGGND--EGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNTSAALTEDGR 160
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
++ + ++ ++G PN PH + PV I+ GY + A + +Y
Sbjct: 161 LFMWGDNSEGQIGLPDMPNACVPHQV---TTGKPVSWISCGYYH---SAFVTTDGELYIF 214
Query: 230 GCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G GKLG + ++ + P+L+ + +Q VA G H+ V+ ++ + T+G G+
Sbjct: 215 GEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQ---VACGGEHSVVLTEND-LYTFGLGK 270
Query: 288 YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G LG G E S P+VV+++ K +++ G+ ++++ G +Y+FG G LG
Sbjct: 271 FGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTDTGLMYTFGDGRHGKLG 328
Score = 75.1 bits (183), Expect = 6e-11, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 16/249 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A G H++ T G VY+ G N GQLG G TEE I +I Q +AG+
Sbjct: 92 AACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNT 151
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ G+++ +G +S E + G+ P V + K + + + G + +A ++
Sbjct: 152 SAALTEDGRLFMWGDNS--EGQIGLPDMPNACVPHQVTTGKPVSWI--SCGYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 224
+G +Y F + +LG E + H + + IP V+Q+A G + + L +
Sbjct: 208 DGELYIFGEPENGKLGLPYEL--LSNHRIPQLVPEIPEKVIQVACGGEHSVVL----TEN 261
Query: 225 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
+Y+ G G G+LG G+ E PR++E + + ++ G HAA++ G + T+
Sbjct: 262 DLYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKIS--YISCGENHAALLTDTGLMYTF 319
Query: 284 GWGRYGCLG 292
G GR+G LG
Sbjct: 320 GDGRHGKLG 328
Score = 58.2 bits (139), Expect = 7e-06, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
L+ D+G V+ FGK F E G KN V + G+ +AV++
Sbjct: 7 LMPDSGAVFVFGKSKFTENTPGKFW------------FKNDVAVHLSCGDEHSAVVTGNN 54
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
++Y F N +LG ++ +P + L+ V A G + L G VY+
Sbjct: 55 KLYVFGSNNWGQLGLGSKSAVSKP-TCVKALKPEKVKLAACGRNHTLV---STEGGNVYA 110
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G T+E+ + F + ++AG+ +A + +DGR+ WG
Sbjct: 111 TGGNDEGQLGLGD-TEERTTFHLISFFTPQHKIKQLSAGSNTSAALTEDGRLFMWGDNSE 169
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G +G + VP V V I + G Y + V+ DG++Y FG E+ LG
Sbjct: 170 GQIGLPDMPNACVPHQVTTGKPVSWI--SCGYYHSAFVTTDGELYIFGEPENGKLG 223
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 111
HS VT+ G +Y FG +G+LG + P+ + + ++IQ A G +++++
Sbjct: 201 HSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLT 259
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+ +Y FG FG+ G + + P++VES+K + + G A+L+ G +Y
Sbjct: 260 E-NDLYTFGLGKFGQLGLGTFLFE-TSEPRVVESIKGRKISYISCGENHAALLTDTGLMY 317
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALA 218
TF G +LG E + P+L + L V +A G C+++ A
Sbjct: 318 TFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACGGCHMVVFA 365
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S A+T G ++ +G NS GQ+G P + + + + I + G
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWI--SCGYYH 201
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ ++ G++Y FG+ G+ + PQLV + V+Q A G + VL+
Sbjct: 202 SAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEK-VIQVACGGEHSVVLT- 259
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E +YTF G +LG T + ++ +++ + I+ G + L +G+ +
Sbjct: 260 ENDLYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLT--DTGL-M 316
Query: 227 YSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
Y+ G G GKLG + T++ P L LL + +VA G H V
Sbjct: 317 YTFGDGRHGKLGLELENFTNQFIPILCS--YLLKYKVKLVACGGCHMVV 363
>gi|395503881|ref|XP_003756290.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sarcophilus
harrisii]
Length = 941
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 146/323 (45%), Gaps = 37/323 (11%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + LQG I Q +
Sbjct: 338 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 397
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAI 156
G T+ ++D GQ+YAFG D YG G V P+++E ++ F V Q +
Sbjct: 398 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQVDFFLNNPVEQVSC 452
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVE-PHPLLGTLENIPVVQIAAG 210
G+ AVL+R VY++ G RLG +E P V+ P L+ I VQ +
Sbjct: 453 GDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALI-----IVSVQCSCD 507
Query: 211 YCYLLA-----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP---RLIEQFQLLNLQPV 262
+LL LAC + + + G + H + + + L +Q ++
Sbjct: 508 GTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLSFYKIR-- 565
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDY 321
+A G H A + + GR+ T+G + G LG GN + + + L + I V+ GD
Sbjct: 566 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDE 625
Query: 322 TTFVVSEDGDVYSFGCGESASLG 344
T ++D ++++G G + L
Sbjct: 626 FTIAATDDNHIFAWGNGGNGRLA 648
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 138 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 184
++PQ ++ +K+ Q GN AV++ E +YT W N +LGH +
Sbjct: 322 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVNMQGGTKLHGQLGHGDKASY 379
Query: 185 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+P VE L+ + Q++ G + + C +Y+ G G +G
Sbjct: 380 RQPKHVE------KLQGKAIHQVSCGDDFTV---CVTDEGQLYAFGSDYYGCMGVDKVAG 430
Query: 245 EKHPRLIEQFQL---LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 301
P ++E Q+ LN V+ G H AV+ ++ V +WG G YG LG +EE +
Sbjct: 431 ---PEVLEPMQVDFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYI 487
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
P+ V + + V TF++++ G V + G E LG N G +
Sbjct: 488 PQKVDVPKALIIVSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 539
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 264 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VA 317
V AG H AVV + + TW G +G LGHG++ PK V+ L KAIH V+
Sbjct: 339 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG-KAIHQVS 397
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
GD T V+++G +Y+FG +G + +A +V + + F
Sbjct: 398 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQVDFF 442
>gi|218195760|gb|EEC78187.1| hypothetical protein OsI_17792 [Oryza sativa Indica Group]
Length = 549
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 39/273 (14%)
Query: 31 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
+RF+ +G C H +A+ ++G Y++G N GQLGHG T + P +
Sbjct: 70 IRFVASGCTAC------------HCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVS 117
Query: 91 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ--LVESLKN 148
L ++I+A+ G T++++D G+ ++FG + G+ G ++ TSP LV N
Sbjct: 118 ELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATN 177
Query: 149 IFVVQAAIGNFFTAVLSR-EGR-VYTFSWGNDARLGHHTEPN------------DVEPHP 194
A G FT LS EG + T +LGH T+ D +P P
Sbjct: 178 -----AVCGADFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRP 232
Query: 195 -LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 253
+ +L +V+ A G + +A+ S VY+ G G G+LGH + DE PRL+E
Sbjct: 233 RAIASLSGKTIVKAACGTNHTVAV---DSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEV 289
Query: 254 FQLLNLQP--VVVAAGAWHAAVVGQDGRVCTWG 284
FQ N+ P +++AGA +A G++ WG
Sbjct: 290 FQKHNVLPPNAIISAGAASSACTAGGGQLYMWG 322
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292
+G K+ G++ + P + ++++ V A H + +GR TWG G LG
Sbjct: 44 MGRKVVGGAQGNLVSPTRMRSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLG 103
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
HG+ ++P VV L+ K I + G T VV++DG +SFG + LG ++
Sbjct: 104 HGDTLQRNLPTVVSELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSL 159
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 39/274 (14%)
Query: 99 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAI 156
+ AAG+G +L A G+ G G QG + SP + SL +I V +
Sbjct: 24 KDAAGSGGELLYCGATNFETMGRKVVG----GAQGN--LVSPTRMRSLMGVDIRFVASGC 77
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
L EGR YT+ +LGH P ++ L V++ + G + +
Sbjct: 78 TACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLP-TVVSELSKYKVIKASVGRNHTVV 136
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL--LNLQPVVVAAGA----WH 270
+ +S G G+LG GS +E IE + L + GA W
Sbjct: 137 VT---DDGKSFSFGHNKHGQLGTGSLRNE-----IETSPMPCLVTEATNAVCGADFTVWL 188
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNE--------------ECESVPKVVQALNDVKAIHV 316
++V G + T G +YG LGHG + + + P+ + +L+ +
Sbjct: 189 SSVEGS--TILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVKA 246
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
A G T V G VY++G G LGH D
Sbjct: 247 ACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKD 280
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 146/323 (45%), Gaps = 24/323 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ GP + + S V+ +G L + T + P + S + + A G
Sbjct: 214 KTFEGPRAACRLDSLKDVFFWGDAFGSILDYDDTSKSL-PMLVDSTNMLDVQSIACGETH 272
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+I+ G+VY++G +S G G Q V+ P+LVES+ ++ V A G+ ++
Sbjct: 273 AAIITKQGEVYSWGNESSGG--IGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTV 330
Query: 167 EGRVYTFSWGNDARLGH-HTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
G + F WG +G N++ PH L L+ I VV+IA G + + S
Sbjct: 331 SGEL--FEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIIT---SSG 385
Query: 225 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 276
+Y+ G G G LGHG P+ +E + ++ VA G WH A + +
Sbjct: 386 QLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVK--CVACGPWHTAAIVEVLSDFKSN 443
Query: 277 --DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
++ TWG G LGH +++ + +P V +L D I V+ G T V+S G V++
Sbjct: 444 SPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFT 503
Query: 335 FGCGESASLGHNAIADGQ-VCSL 356
G LG N ADG+ VC++
Sbjct: 504 IGSSMHGQLG-NPHADGRTVCAV 525
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 155/346 (44%), Gaps = 77/346 (22%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-------------- 91
Q+IA G H+ +T +G VYS+G+ SSG +G+ + RP+ + S
Sbjct: 264 QSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323
Query: 92 ---------------------------------------LQGIRIIQAAAGAGRTMLISD 112
L GI +++ A G T +I+
Sbjct: 324 HACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITS 383
Query: 113 AGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 164
+GQ+Y +G +FG +G QGT T P+ VE LK V A G + TA +
Sbjct: 384 SGQLYTYGDGTFGVLGHGDTQGT---TRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDF 440
Query: 165 -SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 221
S R F+WG+ R LGH + + P + +L + +Q++ G + L+
Sbjct: 441 KSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGMALTVVLSI-- 497
Query: 222 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
+G+ V+++G + G+LG+ D + +E LL + V +++G+ H AV+ +G+V
Sbjct: 498 TGV-VFTIGSSMHGQLGN-PHADGRTVCAVE--GLLKTEFVRHISSGSSHVAVLTTNGKV 553
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
TWG G+ G LG G+ S P +V AL + ++ G +YT V
Sbjct: 554 FTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAV 599
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 35/303 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
GP H+ +TS G +Y++G + G LGHG T+ RP+ + L+G R+ A G T I
Sbjct: 374 GPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAI 433
Query: 111 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
S +++ +G G+ + + KL+ P V+SL + +Q + G
Sbjct: 434 VEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI--PTCVDSLTDYDFIQVSCGMAL 491
Query: 161 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 219
T VLS G V+T +LG+ H + V + G L+ V I++G ++ L
Sbjct: 492 TVVLSITGVVFTIGSSMHGQLGNPHADGRTV--CAVEGLLKTEFVRHISSGSSHVAVLT- 548
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVV 274
+ V++ G G G+LG G + P L++ + ++ + AA H +
Sbjct: 549 --TNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIIS 606
Query: 275 GQDGRVCT-----WGWGR--YGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 322
+D VC+ +G+ R + C G+ C S V + A + ++ V G ++
Sbjct: 607 RKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAALAPDKIRRYRVCDGCFS 666
Query: 323 TFV 325
+
Sbjct: 667 QLL 669
>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
Length = 1019
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 144/306 (47%), Gaps = 31/306 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H++ +T G ++S GSN GQLG G+ TE + P+ +IIQ +AG T+
Sbjct: 49 GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVS 108
Query: 110 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++D G+V+A+G + G E+++ QGT P+ V+ + +I VQ A G+ L
Sbjct: 109 VTDDGRVFAWGSNEHGQLGMESKFTWQGT-----PRRVQEINDI--VQVASGSNHCIALD 161
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
GRV+ + D R H EP + L +P+V++ AG + LAL+ SG A
Sbjct: 162 EGGRVFVWGEQADGRCIHRPEP--------VEQLSGVPIVRVLAGARHCLALSA--SG-A 210
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V++ G G+LG D+ P+ Q Q+ L V A G H ++ GR ++
Sbjct: 211 VFTWGQNNSGELG----IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSF 266
Query: 284 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G G G G + E + P V L +A G T + + G Y FG S
Sbjct: 267 GSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQ 325
Query: 343 LGHNAI 348
LG+ I
Sbjct: 326 LGNGKI 331
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 66/261 (25%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG----------------------------HG 78
Q AG H+++VT G V+++GSN GQLG H
Sbjct: 98 QISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHC 157
Query: 79 TTEEE------W----------RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
+E W RP P+ L G+ I++ AGA + +S +G V+ +G++
Sbjct: 158 IALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQN 217
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--- 179
+ G E G+ + TS Q V + + VV+AA G+ T +L+ GR TFS+G+DA
Sbjct: 218 NSG--ELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGR--TFSFGSDALGQ 273
Query: 180 -----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 234
++ T P V L+G+ V +IAAG C+ +A+ C+ A Y G
Sbjct: 274 CGFGKKVEKRTNPTAVS--DLIGS----HVTRIAAGACHTIAI-CKG---APYPFGLNSS 323
Query: 235 GKLGHGSRTDEKHPRLIEQFQ 255
G+LG+G + PR ++
Sbjct: 324 GQLGNGKIMTQSTPRKTDELD 344
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 68 GSNSSGQLGHGTTEEEWR-PRPI----RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 122
G GQLG +E + P I + G + G T+ ++ G++++ G +
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 123 SFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 179
G+ G +G+ + S K ++Q + G T ++ +GRV F+WG++
Sbjct: 69 MDGQLGRGSRTEGSFSIYPVSWTSSAK---IIQISAGRSHTVSVTDDGRV--FAWGSNEH 123
Query: 180 -RLGHHTE------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 232
+LG ++ P V+ E +VQ+A+G + +AL G V+ G
Sbjct: 124 GQLGMESKFTWQGTPRRVQ--------EINDIVQVASGSNHCIAL---DEGGRVFVWGEQ 172
Query: 233 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+ H P +EQ L+ P+V V AGA H + G V TWG G L
Sbjct: 173 ADGRCIH-------RPEPVEQ---LSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G + ++ + V ++ + + A GD T +++ G +SFG
Sbjct: 223 GIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG 267
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSG--QLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 107
G + A+T G +Y++G N SG +G +W P + L G I A G
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 164
++S +GQ++ +G +FG +G + ++ P+ VESL ++V AA G + TA +
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLGHG--KLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 484
Query: 165 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
++ G+++T+ G+ RLGH + + P + L + VQ++ G +
Sbjct: 485 RADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP-TCVAQLVDHDFVQVSCGRMLTVG 543
Query: 217 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAA 272
L C + VY++G + G+LG+ D+ +L ++F +++G++H A
Sbjct: 544 LTCLGT---VYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEF------VKEISSGSYHVA 594
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ G + TWG G G LG G+ E + P VV+AL D + +A G
Sbjct: 595 ALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACG 641
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 30/305 (9%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 123
VY FG+ +G + P+ + S + + + + G L++ G+V+ +G+ S
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGS 335
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--- 180
G + V + +P++VESL + V + G + T L+ G +YT WG++
Sbjct: 336 GGXLGHKVNMD--MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYT--WGDNGSGID 391
Query: 181 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 239
+G + + P L G L + +A G ++ ++ + +++ G G G LGH
Sbjct: 392 LVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS---TSGQLFTYGDGTFGVLGH 448
Query: 240 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRY 288
G P+ +E L ++ A G WH A + + G++ TWG G
Sbjct: 449 GKLESISQPKEVESLSGLWVK--AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDK 506
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
G LGHG++E + +P V L D + V+ G T ++ G VY+ G LG+
Sbjct: 507 GRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQA 566
Query: 349 ADGQV 353
D +
Sbjct: 567 KDKSI 571
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 20/313 (6%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G V+ +G S G LGH + P+ + SL G+ + + G +T +
Sbjct: 315 GGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL 374
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ +G++Y +G + G G + + P +L L + A G + A++S G+
Sbjct: 375 THSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQ 434
Query: 170 VYTFSWGNDARLGHH-----TEPNDVEPHPLL-------GTLENIPVVQIAAGYCYLLAL 217
++T+ G LGH ++P +VE L G +V++ A L
Sbjct: 435 LFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRAD-----RL 489
Query: 218 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 277
G +++ G G G+LGHG + + P + Q L++ V V+ G +
Sbjct: 490 KFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQ--LVDHDFVQVSCGRMLTVGLTCL 547
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V T G +G LG+ + +S+ V L D +++G Y ++ G +Y++G
Sbjct: 548 GTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGM 607
Query: 338 GESASLGHNAIAD 350
G + LG D
Sbjct: 608 GANGQLGLGDTED 620
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+G H A+TSKG +Y++G ++GQLG G TE+ P + +L+ ++ A G+G T
Sbjct: 588 SGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAA 647
Query: 110 I 110
I
Sbjct: 648 I 648
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q G ++ +T G VY+ GS GQLG+ +++ L+ + + ++G+
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYH 592
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ G +Y +G + G + G+ T+ SP +VE+L++ V A G+ FTA +
Sbjct: 593 VAALTSKGSLYTWGMGANG--QLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAI 648
>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
Length = 453
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 92 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTET 151
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 152 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 209
Query: 174 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 210
+LGH+++ D E P + + N+ V +A G
Sbjct: 210 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 269
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 270 ANHTLILDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 326
Query: 271 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 330
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 327 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 379
Query: 331 DVYSFG 336
S+G
Sbjct: 380 STISWG 385
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 138 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 196
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 197 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 255
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T +L + RV+++ +G RLGH + +++ P L L + P
Sbjct: 256 LPVPNVVVRDVACGANHTLILDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 313
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 314 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 364
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 317
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 365 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 421
Query: 318 TGDYTTFVVSED 329
G + V++ D
Sbjct: 422 MGYSHSLVIARD 433
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 70 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 127
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
+ L+ + +V+AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 128 DG---LSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 183
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 184 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 224
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 95 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTETGS 153
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 154 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 206
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 207 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 266
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T ++ V+S+G G LGH D V L+ L F
Sbjct: 267 ACGANHTLILDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 312
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 315 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 368
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 369 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 428
Query: 163 VLSRE 167
V++R+
Sbjct: 429 VIARD 433
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 34/307 (11%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 110
G H+ VT G +Y FGSN+ GQLG G+ +P +++L+ + A G T++
Sbjct: 38 GDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVY 97
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 169
++ G VYA G +S E + G+ T+ ++ L+ N + Q A G++ +A ++ +G+
Sbjct: 98 TEKGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQ 155
Query: 170 VYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
++ + ++ ++G E P V+ +G PV I+ GY Y AL
Sbjct: 156 LFVWGDNSEGQIGLADEACVSVPCQVD----VGK----PVSSISCGY-YHSALIT--GDG 204
Query: 225 AVYSVGCGLGGKLG------HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 278
+Y+ G GKLG +R + P ++E+ VA G H V+ +
Sbjct: 205 ELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVN-------KVACGGEHTVVLTETD 257
Query: 279 RVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
V T+G G+YG LGHG E SVPK V+ L K ++ G+ T VV+E+G +++FG
Sbjct: 258 -VYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGD 316
Query: 338 GESASLG 344
G LG
Sbjct: 317 GRHGKLG 323
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 16/253 (6%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGR 106
A+ G H++ T KG VY+ G NS GQLG G TEE I +I Q AAG+
Sbjct: 87 AVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYT 146
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +++ GQ++ +G +S E + G+ V+ P V+ K + + + G + +A+++
Sbjct: 147 SAAVTEDGQLFVWGDNS--EGQIGLADEACVSVPCQVDVGKPVSSI--SCGYYHSALITG 202
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+G +YTF + +LG E N+ P P+ G +E + V + +L +
Sbjct: 203 DGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGEHTVVL------TET 256
Query: 225 AVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY+ G G G+LGHG+ E P+ ++ + + + G H AVV ++G + T+
Sbjct: 257 DVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKI--CNITCGENHTAVVAENGLMFTF 314
Query: 284 GWGRYGCLGHGNE 296
G GR+G LG G E
Sbjct: 315 GDGRHGKLGLGEE 327
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 11/229 (4%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG S AVT G ++ +G NS GQ+ G +E P + G + + G
Sbjct: 139 QLAAGSYTSAAVTEDGQLFVWGDNSEGQI--GLADEACVSVPCQVDVGKPVSSISCGYYH 196
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ LI+ G++Y FG+ G+ + K PQ V + V + A G T VL+
Sbjct: 197 SALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEK-VNKVACGGEHTVVLT- 254
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 226
E VYTF G +LGH T + + L + I G + +A +G+ +
Sbjct: 255 ETDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVA--ENGL-M 311
Query: 227 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 273
++ G G GKLG G T++ P L F L ++VA G H V
Sbjct: 312 FTFGDGRHGKLGLGEENYTNQFDPTLCYNF--LRFTVLLVACGGCHMLV 358
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 21/204 (10%)
Query: 35 LAGEAC----CRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR- 85
LA EAC C+ + + ++ G HS +T G +Y+FG +G+L G E+ +
Sbjct: 169 LADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKL--GLLPEQLKN 226
Query: 86 ---PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 142
P+P+ + ++ + A G T+++++ VY FG +G+ +G + + P+
Sbjct: 227 NRVPQPVPGIME-KVNKVACGGEHTVVLTET-DVYTFGLGQYGQLGHGTFIFE-TSVPKS 283
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLE 200
V+ L+ + G TAV++ G ++TF G +LG E N +P L
Sbjct: 284 VKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPT-LCYNFL 342
Query: 201 NIPVVQIAAGYCYLLALAC-QPSG 223
V+ +A G C++L A +P G
Sbjct: 343 RFTVLLVACGGCHMLVFAAPRPEG 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 253 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+F N +PV+++ G H A+V +G++ +G +G LG G++ S P V+AL K
Sbjct: 24 KFWFKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEK 83
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G T V +E G+VY+ G LG
Sbjct: 84 TKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLG 115
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI-SD 112
+I +T VY+ GSN S LG G + PR I L +I+ G+G +L+ +D
Sbjct: 40 EAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTD 99
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 171
G +Y++G + G ++ G T SPQL+ + L VV+ A G+ + L+ EG V+
Sbjct: 100 NGDLYSWGHN--GYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVF 157
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 231
+ + N ++G T N P + L V +IA G +AL VY G
Sbjct: 158 AWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALL---DNGEVYGWGY 214
Query: 232 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291
G+LG G+ ++ +P + Q + + V + G HA + +G V WG YG L
Sbjct: 215 NGNGQLGVGNNVNQPNPCRVAALQQMIV--VQIVCGYAHAMALTDEGSVYAWGANSYGQL 272
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFG 336
G GN+ P + AL+ + + + Y + +++ G VY +G
Sbjct: 273 GTGNKANLVTPTKI-ALDKGRFVEIGATHYNHVSSAITQTGKVYMWG 318
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 18/244 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 108
+GP H + T G +YS+G N QLG+G+T + P+ I + L G ++++ A G+ ++
Sbjct: 90 SGP-HVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSL 148
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G+V+A+G ++ G+ G T T ++ L V + A G + L G
Sbjct: 149 ALTLEGEVFAWGYNNCGQVGSGTT-TNQATPRKVAACLGTRKVTEIACGQTSSMALLDNG 207
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
VY + + + +LG N +P+P + L+ + VVQI GY + +AL + S VY
Sbjct: 208 EVYGWGYNGNGQLGVGNNVN--QPNPCRVAALQQMIVVQIVCGYAHAMALTDEGS---VY 262
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTW 283
+ G G+LG G++ + L+ ++ + V GA H ++ + Q G+V W
Sbjct: 263 AWGANSYGQLGTGNKAN-----LVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMW 317
Query: 284 GWGR 287
G R
Sbjct: 318 GQCR 321
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 5/170 (2%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAA 101
R+ + G HS+A+T +G V+++G N+ GQ+G GTT + PR + + G R + + A
Sbjct: 135 RKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIA 194
Query: 102 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
G +M + D G+VY +G + G + GV +P V +L+ + VVQ G
Sbjct: 195 CGQTSSMALLDNGEVYGWGYN--GNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHA 252
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 211
L+ EG VY + + +LG + N V P + L+ V+I A +
Sbjct: 253 MALTDEGSVYAWGANSYGQLGTGNKANLVTPTKI--ALDKGRFVEIGATH 300
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R+ ++ G S+A+ G VY +G N +GQLG G + P + +LQ + ++Q
Sbjct: 188 RKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVC 247
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G M ++D G VYA+G +S+G+ G + LVT ++ + A N ++
Sbjct: 248 GYAHAMALTDEGSVYAWGANSYGQLGTGNKA-NLVTPTKIALDKGRFVEIGATHYNHVSS 306
Query: 163 VLSREGRVYTFSWG 176
+++ G+VY WG
Sbjct: 307 AITQTGKVYM--WG 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 31/278 (11%)
Query: 82 EEWRPRPIRSLQGIRIIQAAAGA-------GRTMLISDAGQVYAFGKDS-----FGEAEY 129
E W PI SL I + A ++I+ VYA G + G+A+
Sbjct: 12 ERW---PIFSLLDPEFISSIKQACVFGSSGNEAIVITQDDDVYALGSNCSSCLGVGDAQS 68
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGN-FFTAVLSREGRVYTFSWGND--ARLGHHTE 186
G++ P+ ++ L +V G+ V + G +Y SWG++ ++LG+ +
Sbjct: 69 GLE-------PRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLY--SWGHNGYSQLGNGST 119
Query: 187 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 246
+ P + L VV++A G + LAL + V++ G G++G G+ T++
Sbjct: 120 NQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGE---VFAWGYNNCGQVGSGTTTNQA 176
Query: 247 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
PR + L + +A G + + +G V WG+ G LG GN + P V
Sbjct: 177 TPRKVAAC-LGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVA 235
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
AL + + + G ++++G VY++G LG
Sbjct: 236 ALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLG 273
>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
Length = 426
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 162/382 (42%), Gaps = 64/382 (16%)
Query: 7 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 52
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 16 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 75
Query: 53 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 97
HS+ +T++G ++S+G N GQLGHG T+ P+ I L I
Sbjct: 76 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 135
Query: 98 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
+ AA G T+ +++ G V AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 136 VSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 193
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 195
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 194 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 253
Query: 196 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 254
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 254 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 310
Query: 255 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 314
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 311 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 364
Query: 315 HVATGDYTTFVVSEDGDVYSFG 336
+A G ++ +V+ D S+G
Sbjct: 365 SLACGK-SSIIVAADESTISWG 385
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 48/295 (16%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 106
A G H++A+T G V +FG N GQLG G + + P P + + G I + A GA
Sbjct: 138 AACGRNHTLALTETGSVLAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 196
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 197 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 255
Query: 145 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 256 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 313
Query: 204 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 260
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 314 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 364
Query: 261 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAI 314
+ + +V D +WG +G LG+G+ + PK A +VK +
Sbjct: 365 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHK----PKSSTAAQEVKTL 412
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 70 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 127
Query: 252 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 310
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 128 EG---LSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 183
Query: 311 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
+ I +A G + ++ G++YSFGC E LGHN +DG+
Sbjct: 184 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN--SDGK 224
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 95 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 153
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
V + G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 154 ---VLAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 206
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 207 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 266
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G T V+ V+S+G G LGH D V L+ L F
Sbjct: 267 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 312
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 102
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 315 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 368
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G
Sbjct: 369 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMG 423
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 150/297 (50%), Gaps = 17/297 (5%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGH----GTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
G H++ + G V S G NS GQLG G + + P I++L+ +++ + G
Sbjct: 45 GERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEH 104
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + + G+VY++G +FG+ G G +L+ P+ + +L V+Q A G+ + L+
Sbjct: 105 SLAVCNKGRVYSWGAGTFGQLGTGELGDRLI--PKTINALSKYKVIQVACGHDHSIALTN 162
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 224
+GR+ FSWG + +LG + + + L+ IP+ Q+AAG + AL+ SG+
Sbjct: 163 DGRI--FSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSL--SGV 218
Query: 225 AVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
VY G +LG ++ E+ + L +L V+ GA H AV+ Q+G V T+
Sbjct: 219 -VYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTF 277
Query: 284 GWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
G G LG + P+ V+ ++ ++ +A G Y T V +S G + SFG G
Sbjct: 278 GDDSAGQLGRNSSSSPKFGPQKVEWIDGPVSL-LACGSYHTLVRISTSGQLLSFGRG 333
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 24/299 (8%)
Query: 63 VVYSFGSNSSGQLGHGTTE-----EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 117
++Y +G S+GQLG G E +RP P R+ ++ A G T+L+ D G V
Sbjct: 1 MLYCWGEGSAGQLGLGKGEGVSGPVPFRPGP-RAPADQAVVLVACGERHTLLLRDDGGVA 59
Query: 118 AFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
+ G +S G+ + K P+L+++L+ VV + G + + +GRVY++
Sbjct: 60 SCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGA 119
Query: 176 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 235
G +LG + + P + L V+Q+A G+ + +AL + ++S G + G
Sbjct: 120 GTFGQLGTGELGDRLIPK-TINALSKYKVIQVACGHDHSIALT---NDGRIFSWGQNIHG 175
Query: 236 KLGHGSR-TDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
+LG G + + P +Q L+ P+ VAAG H+ + G V +GWGR
Sbjct: 176 QLGLGKDISSQASP---QQVSALDGIPLAQVAAGGAHSFALSLSGVV--YGWGRNNAHQL 230
Query: 294 GNEECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G + + P + AL + V+ G T V++++G VY+FG + LG N+
Sbjct: 231 GLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNS 289
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q G HSIA+T+ G ++S+G N GQLG G + P+ + +L GI + Q AAG
Sbjct: 149 QVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGA 208
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S +G VY +G+++ + + + + P + +L+++ V + G TAVL
Sbjct: 209 HSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVL 268
Query: 165 SREGRVYTFSWGNDARLGHHT 185
++ G VYTF + +LG ++
Sbjct: 269 TQNGSVYTFGDDSAGQLGRNS 289
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 22/143 (15%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG---TTEEEWRPRPIRSLQGIRIIQAAA 102
+Q AG HS A++ GVVY +G N++ QLG E+ ++P I +L+ + + +
Sbjct: 201 AQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSC 260
Query: 103 GAGRTMLISDAGQVYAFGKDSFGE--------AEYGVQGTKLVTSPQLVESLKNIFVVQA 154
GA T +++ G VY FG DS G+ ++G Q + + P V
Sbjct: 261 GAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGPQKVEWIDGP----------VSLL 310
Query: 155 AIGNFFTAV-LSREGRVYTFSWG 176
A G++ T V +S G++ +F G
Sbjct: 311 ACGSYHTLVRISTSGQLLSFGRG 333
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 262 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVA 317
V+VA G H ++ DG V + G G LG G E+ P+++QAL K +HV+
Sbjct: 40 VLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVS 99
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL-FLSIFQYLQI 367
G + V G VYS+G G LG + D + + LS ++ +Q+
Sbjct: 100 CGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQV 150
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
G H+ +T G VY+FG +S+GQLG + ++ ++ P+ + + G + A +
Sbjct: 261 GAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGPQKVEWIDGPVSLLACGSYHTLVR 320
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTK 135
IS +GQ+ +FG+ G +K
Sbjct: 321 ISTSGQLLSFGRGPLQRNRSGTTQSK 346
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 19/300 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V+++G NS GQLG GT + P + L G+ + +AG+ ++
Sbjct: 794 AGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAV--SAGSAHSLA 851
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + +G+ +LV P V L VV A G + + +G
Sbjct: 852 LRSDGTVWAWGYNFYGQLGDATSTQRLV--PIQVPGLTG--VVSIAAGTHHSLAVRSDGT 907
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
V+ + + +LG T+ P + G +V +AAG + LA+ + V++
Sbjct: 908 VWAWGYNFYGQLGDGTKIQRSPPVQVPGLAG---MVSVAAGTYHSLAVHSNGT---VWAW 961
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T P I V+ AA WH+ VV DG V WG
Sbjct: 962 GYNNHGQLGDGTTTQRLLPVPISSS-----SGVIAAAANWHSLVVRTDGTVWGWGSNNAS 1016
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 349
LG G+ +P N V++I ++G + + DG V+++G G S LG ++
Sbjct: 1017 QLGDGSTSDRKMPTPSSVPNGVRSI--SSGANHSLALRSDGTVWAWGFGNSGQLGDGVMS 1074
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 144/306 (47%), Gaps = 24/306 (7%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS+ + S G V+++G N+ GQLG GT + P ++SL ++ A G
Sbjct: 41 QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQH 98
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G V+A+G + FG+ G V P V SL + + A G+ + L
Sbjct: 99 SLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVAI--AAGDHHSLALLS 154
Query: 167 EGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 223
+G V+ + + +LG T P V+ L G VV ++AG + LA+ S
Sbjct: 155 DGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG------VVALSAGSTHSLAVL---SD 205
Query: 224 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 283
V + G G+LG GS T+ P L+ L ++ VV AG +H+ + DG V W
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVS--SLTGVKSVV--AGTFHSLALCSDGTVRAW 261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G G LG + VP VV L +V+A+ A G + + DG V ++G + +
Sbjct: 262 GENGSGQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQV 319
Query: 344 GHNAIA 349
G+ I+
Sbjct: 320 GNGTIS 325
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 140/297 (47%), Gaps = 38/297 (12%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG G+S+AV ++G V+++G N GQLG GTT P +L G+ + AAG ++
Sbjct: 594 AGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPALSGV--VALAAGDSHSLA 651
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G +A+G + G+ G T ++P V L + VV A GN + VL +G
Sbjct: 652 LRADGVAWAWGGNDQGQ--LGDATTLERSTPAAVPGLAH--VVALAAGNAHSLVLHADGT 707
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV--------VQIAAGYCYLLALAC 219
+ SWGN+A +LG T TL +PV +AAG + LA+
Sbjct: 708 --SSSWGNNAYGQLGDGTS-----------TLHPVPVQVPGPSAMKGVAAGGSHSLAVRS 754
Query: 220 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 279
+ V++ G G+LG G T + PR + Q Q L V V+AG H+ V DG
Sbjct: 755 DGT---VWAWGNNGSGELGDG--TGLQRPRPV-QVQGLG-SAVAVSAGTNHSLAVQSDGT 807
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
V WG G LG G VP V LN V A V+ G + + DG V+++G
Sbjct: 808 VWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMA--VSAGSAHSLALRSDGTVWAWG 862
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 18/295 (6%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ + G V+++G NS+G LG GTT P + L G ++ AAG G ++
Sbjct: 544 AGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLA 601
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V+A+G + G+ G ++ +P +L VV A G+ + L +G
Sbjct: 602 VDAQGSVWAWGYNGMGQLGDGTTTPRV--TPTQAPALSG--VVALAAGDSHSLALRADGV 657
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 229
+ + + +LG T P + G VV +AAG + L L + S
Sbjct: 658 AWAWGGNDQGQLGDATTLERSTPAAVPGLAH---VVALAAGNAHSLVLHADGT---SSSW 711
Query: 230 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 289
G G+LG G+ T P + + VAAG H+ V DG V WG G
Sbjct: 712 GNNAYGQLGDGTSTLHPVPVQVPGPSAMK----GVAAGGSHSLAVRSDGTVWAWGNNGSG 767
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG G P VQ L A+ V+ G + V DG V+++G LG
Sbjct: 768 ELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLG 820
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 28/300 (9%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+AV S G V ++G N GQLG G++ E W P + SL G++ + AG ++
Sbjct: 194 AGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSV--VAGTFHSLA 251
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ G V A+G++ G + G+ T P +V L N+ + A G+ + L +G
Sbjct: 252 LCSDGTVRAWGEN--GSGQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGT 307
Query: 170 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
V +WGN+ ++G+ T + P P +G +++ IAAG + +LA + G+
Sbjct: 308 VR--AWGNNDHGQVGNGTISQQLTPVQVPGVGRMKS-----IAAGGAH--SLAMRADGI- 357
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 284
++ G G+LG G + + P R++ Q + L G H+ + DG V WG
Sbjct: 358 TWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMPL-----GTGNRHSLALHADGTVWAWG 412
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G LG G + ++P V L V + T + DG V+++G LG
Sbjct: 413 VNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTSH--SLAARADGTVWAWGDNAFGQLG 470
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+A + G V+++G N+ GQLG GTT + P + L G+ + + ++ +S
Sbjct: 448 HSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSM--HQHSLAVSRD 505
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+A+G + G G ++L +P V L ++ V A G+ + L +G V+ +
Sbjct: 506 GTVWAWGFNGSGRLGDGTTLSRL--TPVQVPGLSSMVAV--AAGSTHSLALRADGTVWAW 561
Query: 174 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 233
++ LG T + P + G VV +AAG Y LA+ Q S V++ G
Sbjct: 562 GDNSNGALGDGTTLRRLSPVQVPGLSG---VVALAAGNGYSLAVDAQGS---VWAWGYNG 615
Query: 234 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 293
G+LG G+ T P + V +AAG H+ + DG WG G LG
Sbjct: 616 MGQLGDGTTTPRVTPTQAPALSGV----VALAAGDSHSLALRADGVAWAWGGNDQGQLGD 671
Query: 294 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
S P V L V A+ A G+ + V+ DG S+G LG
Sbjct: 672 ATTLERSTPAAVPGLAHVVAL--AAGNAHSLVLHADGTSSSWGNNAYGQLG 720
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
AG HS+A+ S G V+++G N GQLG T+ + P + L G+ + AAG ++
Sbjct: 844 AGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGV--VSIAAGTHHSLA 901
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+A+G + +G+ GTK+ SP + V L + V A G + + + G
Sbjct: 902 VRSDGTVWAWGYNFYGQLG---DGTKIQRSPPVQVPGLAGM--VSVAAGTYHSLAVHSNG 956
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
V+ + + N +LG T + P P+ + V+ AA + L+ + G V+
Sbjct: 957 TVWAWGYNNHGQLGDGTTTQRLLPVPIS---SSSGVIAAAANWHSLV---VRTDGT-VWG 1009
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G +LG GS +D K P + +++GA H+ + DG V WG+G
Sbjct: 1010 WGSNNASQLGDGSTSDRKMPTPSSVPNGVR----SISSGANHSLALRSDGTVWAWGFGNS 1065
Query: 289 GCLGHGNEECESVPKVVQAL 308
G LG G VP V
Sbjct: 1066 GQLGDGVMSMRLVPAGVSGF 1085
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 31/313 (9%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRT 107
+AG HS+A+ S G V ++G N SGQLG +T RP P+ + G+ +QA AAG+ +
Sbjct: 243 VAGTFHSLALCSDGTVRAWGENGSGQLGISSTTR--RPVPVV-VPGLTNVQALAAGSAHS 299
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ + G V A+G + G+ G +L +P V + + + A G + + +
Sbjct: 300 LALRSDGTVRAWGNNDHGQVGNGTISQQL--TPVQVPGVGRMKSIAA--GGAHSLAMRAD 355
Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
G T++WG+D++ LG + P +LG +P + G + LAL +
Sbjct: 356 G--ITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP---LGTGNRHSLALHADGT--- 407
Query: 226 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWG 284
V++ G G+LG G+ PR + Q+ L V ++A H+ DG V WG
Sbjct: 408 VWAWGVNTAGQLGDGTDL----PRTLP-VQVPGLAGVHTLSATTSHSLAARADGTVWAWG 462
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+G LG G +P V L V V++ + VS DG V+++G S LG
Sbjct: 463 DNAFGQLGDGTTTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRLG 520
Query: 345 HNAIADGQVCSLL 357
DG S L
Sbjct: 521 -----DGTTLSRL 528
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 243 TDEKHPRLIEQFQLLNLQPV---VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 299
T++ P IE L P+ VAAGA H+ ++ DG V WG YG LG G +
Sbjct: 20 TEDAGPSRIEAA--LTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQ 77
Query: 300 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQV 353
+P VQ+L+ V A+ A G + + DG V+++G LG + A QV
Sbjct: 78 RLPVRVQSLDSVVAL--AVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQV 129
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 105
Q G HS+A++ G ++++G N GQLG G+ P+ + +L GI ++Q +AG
Sbjct: 260 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKA 319
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++G++ FG + G+ T P L+E+L N V A G TA+L+
Sbjct: 320 HSMALSMSGNIYSWGRNDFG--QLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLT 377
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 225
++G V+TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 378 KDGLVFTFGAGKHGQLGHNSTQNELRPR-LVTELAGNRVTQIACGRQHTLAYVSDLG--K 434
Query: 226 VYSVGCGLGGKLGHGSRTDEKHP 248
V+S G G G+LG+G ++ P
Sbjct: 435 VFSFGSGKEGQLGNGGTHNQLIP 457
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 24/264 (9%)
Query: 85 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+P+ I+ + +I GA +++S G+ + E Y ++ + Q +
Sbjct: 206 KPKCIKLGKKAKIHSVDQGAEYMLILSSDGKPF--------EYNYSIEHARF----QCI- 252
Query: 145 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 202
L+ ++Q G++ + LS+ G + F+WG + +LG ++ + ++ L I
Sbjct: 253 -LQEKXIIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGIGSQFASIAIPQIVENLSGI 309
Query: 203 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 262
P+VQI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 310 PLVQISAGKAHSMALSM--SG-NIYSWGRNDFGQLGLGHTDGKDFPSLIEA--LDNQKVE 364
Query: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DY 321
+A G H A++ +DG V T+G G++G LGH + + E P++V L + +A G +
Sbjct: 365 FLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQH 424
Query: 322 TTFVVSEDGDVYSFGCGESASLGH 345
T VS+ G V+SFG G+ LG+
Sbjct: 425 TLAYVSDLGKVFSFGSGKEGQLGN 448
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 92 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 151
LQ IIQ G ++ +S G+++A+G++ G+ G Q + PQ+VE+L I +
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAI-PQIVENLSGIPL 311
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG 210
VQ + G + LS G +Y++ + +LG HT+ D L+ L+N V +A G
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPS--LIEALDNQKVEFLACG 369
Query: 211 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 270
+ L G+ V++ G G G+LGH S +E PRL+ + L + +A G H
Sbjct: 370 GSHTALLT--KDGL-VFTFGAGKHGQLGHNSTQNELRPRLVTE--LAGNRVTQIACGRQH 424
Query: 271 A-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 302
A V G+V ++G G+ G LG+G + +P
Sbjct: 425 TLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G GT+ P+ ++ K + G + +LS +G+ + +++
Sbjct: 200 GSDGTR---KPKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYS------------- 243
Query: 190 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHP 248
+E L+ ++QI G + LAL+ G +++ G L G+LG GS+ P
Sbjct: 244 IEHARFQCILQEKXIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGIGSQFASIAIP 300
Query: 249 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+++E + L V ++AG H+ + G + +WG +G LG G+ + + P +++AL
Sbjct: 301 QIVENLSGIPL--VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEAL 358
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
++ K +A G T ++++DG V++FG G+ LGHN+ +
Sbjct: 359 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQN 400
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
Q AG HS+A++ G +YS+G N GQLG G T+ + P I +L ++ A G
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSH 372
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T L++ G V+ FG G + G T+ P+LV L V Q A G T A +S
Sbjct: 373 TALLTKDGLVFTFGAGKHG--QLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVS 430
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
G+V++F G + +LG+ N + P P+
Sbjct: 431 DLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 460
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 109
G H+ +T G+V++FG+ GQLGH +T+ E RPR + L G R+ Q A G T+
Sbjct: 369 GGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAY 428
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P + S
Sbjct: 429 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 464
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 26/325 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ GP + + S V+ +GS LG + PR + S + + + A G
Sbjct: 216 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 274
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+I+ G+VY +G S G + V + P++VESL ++ V A G+ T ++
Sbjct: 275 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 332
Query: 167 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G + F WG A LG + N PH LG ++NI V +IA G + + S
Sbjct: 333 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 387
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
+++ G G G LGHG P+ +E + ++ V A G WH A +
Sbjct: 388 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 445
Query: 275 --GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G++ TWG G LGH + + + +P V +L I V+ G T V++ G V
Sbjct: 446 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 505
Query: 333 YSFGCGESASLGHNAIADGQ-VCSL 356
++ G LG N ADG+ +CS+
Sbjct: 506 FTIGSSRHGQLG-NPKADGESICSV 529
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 30/316 (9%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q+IA G H+ +T +G VY++GS SSG+L P+ + SL + + A G+
Sbjct: 266 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 325
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T I+ +G+++ +G+ G G+ G + + + NI V + A G + T
Sbjct: 326 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 382
Query: 162 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
A+++ G+++T+ G LGH P +VE +L+ V +A G + A
Sbjct: 383 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 436
Query: 217 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
+ PSG +++ G GKLGH R + P ++ +L + V+ G
Sbjct: 437 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 493
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
V+ G V T G R+G LG+ + ES+ V L +++G V++
Sbjct: 494 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 553
Query: 329 DGDVYSFGCGESASLG 344
G V+++G G LG
Sbjct: 554 SGKVFTWGKGAEGQLG 569
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 24/284 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAA 102
+A+A G H+ A+T G ++ +G ++S G + +W P + + I + + A
Sbjct: 318 KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIAC 377
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +I+ +GQ++ +G +FG +G T+ V P+ VESLK V A G + TA
Sbjct: 378 GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRVKSVACGPWHTA 435
Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ + G+++T+ + +LGH + P + +L ++Q++ G
Sbjct: 436 AIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP-TCVDSLTAYDLIQVSCGT- 493
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ + +GM V+++G G+LG+ E + + ++ + ++G+ H A
Sbjct: 494 -AVTVVLTVTGM-VFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREI--SSGSSHVA 549
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAI 314
V+ G+V TWG G G LG G+ S P +V+AL DV+++
Sbjct: 550 VLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 593
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G H+ +TS G ++++G + G LGHG T+ RP+ + SL+G R+ A G
Sbjct: 373 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 432
Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
T I + +G+++ +G G+ + + KL+ P V+SL ++Q +
Sbjct: 433 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 490
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T VL+ G V+T +LG + + + + G L+ V +I++G ++
Sbjct: 491 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 549
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
L SG V++ G G G+LG G ++ P L+E + +++ VV AA H
Sbjct: 550 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 606
Query: 271 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
+ +D VC+ +G+ R + C G+ C S
Sbjct: 607 KTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSS 643
>gi|408500679|ref|YP_006864598.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465503|gb|AFU71032.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1226
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTM 108
G S+AV S G Y++G N GQ+G GTT P ++ G+ +Q AAG ++
Sbjct: 727 GFSLAVGSDGNAYAWGYNGFGQIGDGTTANRTMPVMVKKPAGVPTDFTYVQVAAGGYHSL 786
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK----NIFVVQAAIGNFFTAVL 164
I G YA+G + FG + G T + P V S + +Q + G + L
Sbjct: 787 AIGSDGYTYAWGNNDFG--QLGNNTTANSSVPVRVHSPNGSGTGLKAIQVSTGMRSSMAL 844
Query: 165 SREGRVYTF---SWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQ 220
+G VYT+ S GN T P V +P G +QI + + LA+
Sbjct: 845 GADGTVYTWGSLSAGNGQYTSQQTVPAAVMDPADASGVFH---ALQIGTQWSFNLAIGQD 901
Query: 221 PSGMAVYSVGCGLGGKLGH----GSRTDEKHP---RLIEQFQLLN-----LQPVVVAAGA 268
VY+ G G+LG+ G T+ HP R+ Q L+ V+AG
Sbjct: 902 ---HYVYAWGYNNYGQLGNNTSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKATKVSAGG 958
Query: 269 WHAAVVGQDGRVCTWGWGRY--GCLGHGN---EECESVPKVVQALND---VKAIHVATGD 320
WHA + +DG TW WGR G LG+G+ ++ +P+ V+ D V AI ++ GD
Sbjct: 959 WHALAIDEDGN--TWAWGRNIAGQLGNGSNSGDDPNPIPQKVRYPTDAGTVTAIQISGGD 1016
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNA 347
T + +G+ +++G +G NA
Sbjct: 1017 SHTLAIDTNGNAWAWGISNYNQIGDNA 1043
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 32/328 (9%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 102
Q AG HS+A+ S G Y++G+N GQLG+ TT P P S G++ IQ +
Sbjct: 777 QVAAGGYHSLAIGSDGYTYAWGNNDFGQLGNNTTANSSVPVRVHSPNGSGTGLKAIQVST 836
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G +M + G VY +G S G +Y Q T ++ +Q F
Sbjct: 837 GMRSSMALGADGTVYTWGSLSAGNGQYTSQQTVPAAVMDPADASGVFHALQIGTQWSFNL 896
Query: 163 VLSREGRVYTFSWGNDARLGHHT----EPNDVEPHP--LLGTLEN-------IPVVQIAA 209
+ ++ VY + + N +LG++T N P P + + ++ + +++A
Sbjct: 897 AIGQDHYVYAWGYNNYGQLGNNTSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKATKVSA 956
Query: 210 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHP---RLIEQFQLLNLQPVVVA 265
G + LA+ + ++ G + G+LG+GS + D+ +P ++ + + ++
Sbjct: 957 GGWHALAIDEDGN---TWAWGRNIAGQLGNGSNSGDDPNPIPQKVRYPTDAGTVTAIQIS 1013
Query: 266 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--------VKAIHVA 317
G H + +G WG Y +G P V A +K V+
Sbjct: 1014 GGDSHTLAIDTNGNAWAWGISNYNQIGDNAGYNRYSPVRVFASAQSTSSAGPWLKVAQVS 1073
Query: 318 TGDYTTFVVSEDGDVYSFGCGESASLGH 345
G + + + DG ++G ++G+
Sbjct: 1074 AGYFHSSAIDTDGYARAWGDNRYGAIGN 1101
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 206 QIAAGYCYL-----LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ--LLN 258
QI+AG + +LA G A Y+ G G++G G+ + P ++++ +
Sbjct: 714 QISAGGYVMNDLMGFSLAVGSDGNA-YAWGYNGFGQIGDGTTANRTMPVMVKKPAGVPTD 772
Query: 259 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN----DVKAI 314
V VAAG +H+ +G DG WG +G LG+ SVP V + N +KAI
Sbjct: 773 FTYVQVAAGGYHSLAIGSDGYTYAWGNNDFGQLGNNTTANSSVPVRVHSPNGSGTGLKAI 832
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLS------IFQYLQI 367
V+TG ++ + DG VY++G S S G+ Q + +F LQI
Sbjct: 833 QVSTGMRSSMALGADGTVYTWG---SLSAGNGQYTSQQTVPAAVMDPADASGVFHALQI 888
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 26/325 (8%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 106
+ GP + + S V+ +GS LG + PR + S + + + A G
Sbjct: 215 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 273
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+I+ G+VY +G S G + V + P++VESL ++ V A G+ T ++
Sbjct: 274 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 331
Query: 167 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
G + F WG A LG + N PH LG ++NI V +IA G + + S
Sbjct: 332 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 386
Query: 223 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 274
+++ G G G LGHG P+ +E + ++ V A G WH A +
Sbjct: 387 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 444
Query: 275 --GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G++ TWG G LGH + + + +P V +L I V+ G T V++ G V
Sbjct: 445 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504
Query: 333 YSFGCGESASLGHNAIADGQ-VCSL 356
++ G LG N ADG+ +CS+
Sbjct: 505 FTIGSSRHGQLG-NPKADGESICSV 528
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 30/316 (9%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
Q+IA G H+ +T +G VY++GS SSG+L P+ + SL + + A G+
Sbjct: 265 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 324
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T I+ +G+++ +G+ G G+ G + + + NI V + A G + T
Sbjct: 325 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 381
Query: 162 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 216
A+++ G+++T+ G LGH P +VE +L+ V +A G + A
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 435
Query: 217 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 268
+ PSG +++ G GKLGH R + P ++ +L + V+ G
Sbjct: 436 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 492
Query: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
V+ G V T G R+G LG+ + ES+ V L +++G V++
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 552
Query: 329 DGDVYSFGCGESASLG 344
G V+++G G LG
Sbjct: 553 SGKVFTWGKGAEGQLG 568
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 24/284 (8%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAA 102
+A+A G H+ A+T G ++ +G ++S G + +W P + + I + + A
Sbjct: 317 KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIAC 376
Query: 103 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
G T +I+ +GQ++ +G +FG +G T+ V P+ VESLK V A G + TA
Sbjct: 377 GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRVKSVACGPWHTA 434
Query: 163 VL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 212
+ + G+++T+ + +LGH + P + +L ++Q++ G
Sbjct: 435 AIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP-TCVDSLTAYDLIQVSCGT- 492
Query: 213 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 272
+ + +GM V+++G G+LG+ E + + ++ + ++G+ H A
Sbjct: 493 -AVTVVLTVTGM-VFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREI--SSGSSHVA 548
Query: 273 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAI 314
V+ G+V TWG G G LG G+ S P +V+AL DV+++
Sbjct: 549 VLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 592
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 105
S+ G H+ +TS G ++++G + G LGHG T+ RP+ + SL+G R+ A G
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431
Query: 106 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
T I + +G+++ +G G+ + + KL+ P V+SL ++Q +
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 489
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 215
G T VL+ G V+T +LG + + + + G L+ V +I++G ++
Sbjct: 490 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 548
Query: 216 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 270
L SG V++ G G G+LG G ++ P L+E + +++ VV AA H
Sbjct: 549 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 605
Query: 271 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 300
+ +D VC+ +G+ R + C G+ C S
Sbjct: 606 KTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 84 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 141
W P L G+++ A+G A ++LI+ G+++++G++ G+ +G K + P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185
Query: 142 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 201
L+ESLK V AA G T L+ G VY F +LG + D P P
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 202 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 247
P+ ++A G + + + C+ + +YS GC G+LGH S D K+
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299
Query: 248 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 297
R I F Q+L + VVV A G H+ ++ RV +WG+G YG LGH +
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359
Query: 298 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 47/312 (15%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 113
HS+ +T +G ++S+G N GQLGHG + P+ I SL+G + AA G T+ +++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G VYAFG++ G+ G + + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269
Query: 174 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 204
+LGH+ T+ + P P N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323
Query: 205 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 264
IA G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380
Query: 265 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
AGA + V + G + WG + + + PK VQ L K +A G ++
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433
Query: 325 VVSEDGDVYSFG 336
+V+ D S+G
Sbjct: 434 IVAADESTISWG 445
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 46/313 (14%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 105
A G H++A+T G VY+FG N GQLG G + P P + L G I + A GA
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAV-PSPAQILYNGQPITKVACGAE 255
Query: 106 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314
Query: 145 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
+ N+ V A G + +L + RV+++ +G RLGH + +++ P L L +
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372
Query: 203 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 259
P QI AG A++ + G+ + + SR +P+ ++ L
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421
Query: 260 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 316
+ +A G + +V D +WG +G LG+G+ + +S + V+ L+ + +
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQA 480
Query: 317 ATGDYTTFVVSED 329
G+ T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 192 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 251
PH G L + V +A+G C +L G ++S G G+LGHG P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 252 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
E + V A G H + ++G V +G + G LG GN+ ++VP Q L +
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 312 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+ I VA G + ++ G++YSFGC E LGHN+
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNS 281
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 222
+++ EG+++++ + +LGH + ++ L+ +L+ V A G + LAL S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 223 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 280
VY+ G G+LG G++TD P I L N QP+ VA GA + ++ G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 281 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 316
++G YG LGH ++ +CE + + + + +V +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 317 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
A G + ++ V+S+G G LGH+ D V L+ L F
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDF 372
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 28 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 87
+LV F G R +Q AG S AV+ G ++ +G+ ++ + + P+
Sbjct: 365 RLVKLFDFPG-----RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPK 413
Query: 88 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
++ L G ++ A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 414 AVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 473
Query: 148 NIFVVQAAIGNFFTAVLSRE 167
I+ QA +GN T V++R+
Sbjct: 474 GIYSDQAIMGNSHTLVVARD 493
>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
Length = 476
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 38/264 (14%)
Query: 94 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------- 144
G+RI AAG T+ +SD GQV+ +G G+ G + ++V+SP V
Sbjct: 219 GVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPVPCVDPSYGKD 277
Query: 145 -----------------SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
+ +V A G +AV++ G + TF WG + G +
Sbjct: 278 RPAPFSRGGMTSEGHGFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 337
Query: 188 NDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 244
+++ P PLLG I + +AAG + + C + VY+ G G+LG GS
Sbjct: 338 DELSPICVSPLLG----IRIAGVAAGLWHTI---CVSADGDVYAFGGNQFGQLGTGSDQA 390
Query: 245 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
E PRL++ L ++ VV+ GA H+A+V +DG+V WGW +YG LG G+ ++P
Sbjct: 391 ETTPRLLDAPSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSP 450
Query: 305 VQALNDVKAIHVATGDYTTFVVSE 328
V + +VA G + T +++E
Sbjct: 451 V-TIEGCIPRNVACGWWHTLLLAE 473
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 152/361 (42%), Gaps = 60/361 (16%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH--------GTTE------------EEWRP 86
+A AG H IA T G VY++G G G TE E+ P
Sbjct: 105 KAAAGWAHCIAATDTGEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSP 164
Query: 87 RP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLV 143
R RS GI + + + IS A Q AE G + +++ P LV
Sbjct: 165 RSQSSRSTGGIDGRGSGDESTKRRRISSAKQ----------SAESSSSGDETLSALPCLV 214
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPL------L 196
+ + A G T LS G+V+ + +G + +LG + V PHP+
Sbjct: 215 TLNPGVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVDPSY 274
Query: 197 GTLENIPVVQ---IAAGY------CYLLALACQ-------PSGMAVYSVGCGLGGKLGHG 240
G P + + G+ Y+ +AC A+ + G GL G+ G G
Sbjct: 275 GKDRPAPFSRGGMTSEGHGFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 334
Query: 241 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
S DE P + LL ++ VAAG WH V DG V +G ++G LG G+++ E+
Sbjct: 335 STDDELSPICVS--PLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSDQAET 392
Query: 301 VPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLF 358
P+++ A L D+ A V+ G + +V+EDG V+ +G + LG + D + S +
Sbjct: 393 TPRLLDAPSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVT 452
Query: 359 L 359
+
Sbjct: 453 I 453
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 16/293 (5%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 109
+ ++ VT V++ G+N SG LG G + PR I L G +I+ + G G ++
Sbjct: 29 SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVV 88
Query: 110 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
I+ A G+V+A+G + + + G L +P LV + L V + A G+ T L+ +
Sbjct: 89 IATADGEVFAWGHNGYSQLGNGTTNHGL--TPALVSTNLLGKRVTEVACGSHHTIALTAD 146
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 227
G V+ + + N ++G + N P + L++ VV + G L ++A +G +Y
Sbjct: 147 GEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCG--QLCSMAVLDNG-EIY 203
Query: 228 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 287
G G+LG G+ +++ P I Q +N+ V VA G H + +G V WG
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNV--VQVACGYAHTLALTDEGFVYAWGANS 261
Query: 288 YGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
YG LG GN+ +++P ++ + + +V A H + +T+ ++ G V +G
Sbjct: 262 YGQLGTGNKSNQALPTLINTDKERMVEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 21/287 (7%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 109
GP H + T+ G V+++G N QLG+GTT P + + L G R+ + A G+ T+
Sbjct: 84 GP-HVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
++ G+V+A+G ++ G+ G + +P+ V S L++ VV G + + G
Sbjct: 143 LTADGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNG 200
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 228
+Y + + + +LG N P + L+ + VVQ+A GY + LAL G VY+
Sbjct: 201 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNVVQVACGYAHTLALT--DEGF-VYA 256
Query: 229 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 288
G G+LG G+++++ P LI + + V + +A Q G+V WG R
Sbjct: 257 WGANSYGQLGTGNKSNQALPTLINTDK-ERMVEVAACHTSHTSAAKTQSGQVLMWGQCR- 314
Query: 289 GCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ S P + + +DV A AT T ++S DGD Y
Sbjct: 315 -------GQAVSSPHLTHFSSTDDVFAC-FATPAVTWHLLSVDGDDY 353
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 104
++ G H+IA+T+ G V+++G N+SGQ+G G+T + PR + S LQ ++ G
Sbjct: 131 TEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQ 190
Query: 105 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+M + D G++Y +G + G+ G G + +P + +L+ + VVQ A G T L
Sbjct: 191 LCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNVVQVACGYAHTLAL 248
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 209
+ EG VY + + +LG + N + P L + +V++AA
Sbjct: 249 TDEGFVYAWGANSYGQLGTGNKSN--QALPTLINTDKERMVEVAA 291
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,286,289,553
Number of Sequences: 23463169
Number of extensions: 269149081
Number of successful extensions: 677226
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3438
Number of HSP's successfully gapped in prelim test: 1736
Number of HSP's that attempted gapping in prelim test: 593308
Number of HSP's gapped (non-prelim): 33560
length of query: 380
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 236
effective length of database: 8,980,499,031
effective search space: 2119397771316
effective search space used: 2119397771316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)