BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016941
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/314 (45%), Positives = 177/314 (56%), Gaps = 47/314 (14%)
Query: 1 MEFQKSLCLSLA-LFAFFISSSHALKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFF 59
+ F ++ LSL+ LF S+A KFNVGG WVTNP ENY WSG+NRFLV+DTL+F
Sbjct: 9 LSFFFTILLSLSTLFTI----SNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYF 64
Query: 60 KYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKL 119
Y KG+DSVL VNK DYD+CNTK P+ ++D GDSE LDR GPFYFISGN D+C+KGQKL
Sbjct: 65 SYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKL 124
Query: 120 IVVVLHERPPPPSTGPPTTKPPPHAPSPKSPSPATQ-PPATSPSTSPTSHAPSANPPKGS 178
VVV+ R P+T PHA +P S +P + PP + S +S P GS
Sbjct: 125 NVVVISAR-------IPSTAQSPHAAAPGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGS 177
Query: 179 S--PTPATSPSTSSPYPPKGYSPVPATSPSTSPSSHAPSPYPPKGYSPVPATSPSTSPSS 236
+ P A SP +SS A SP+TSP P PK SPV T+ +P
Sbjct: 178 TTPPGGAHSPKSSS-----------AVSPATSP----PGSMAPKSGSPVSPTTSPPAPPK 222
Query: 237 SQSPAANAPTGLSPAPGTSPSTSPSSQPPAANAPTGLSPAPGTSPSTSPSSQPPAANAPT 296
S SP SPS++P + PPA AP S P PS++P + PP + AP
Sbjct: 223 STSP-------------VSPSSAPMTSPPAPMAPKSSSTIP---PSSAPMTSPPGSMAPK 266
Query: 297 GVSPPPGTSPSTSP 310
S P SP+ SP
Sbjct: 267 S-SSPVSNSPTVSP 279
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 86/129 (66%), Gaps = 5/129 (3%)
Query: 11 LALFAFFISSSHALKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYK-KGSDSVL 69
L L A F SSS A F GG+ GWV +P E++N W+ RNRF VNDT+ F + + SVL
Sbjct: 17 LGLVAVF-SSSEAYVFYAGGRDGWVVDPAESFNYWAERNRFQVNDTIVFLHDDEVGGSVL 75
Query: 70 LVNKDDYDSCNTKKPLLKLD---SGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHE 126
V + D+D+C+T P+ +L+ +G S F+ DRSGPF+FISG+ D CQKGQKL ++V+
Sbjct: 76 QVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYIIVMAV 135
Query: 127 RPPPPSTGP 135
RP PS P
Sbjct: 136 RPTKPSEAP 144
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
Query: 11 LALFA--FFISSSHALKFNVGGKHG-WVTNPGENYN--KWSGRNRFLVNDTLFFKYKKGS 65
+A+F+ F S + A + VGGK G W P +Y+ +W+ + RF V D + F+Y+ G
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73
Query: 66 DSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 124
DSVL V K+ Y+SCNT PL G+++ KLDRSGPFYFISG + HC+KGQKL +VV+
Sbjct: 74 DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI 132
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 4 QKSLCLSLALFAFFISSSHALK-FNVGGK-HGWVT--NPGENYNKWSGRNRFLVNDTLFF 59
Q++L + L F +++ K VGGK W +P E+ NKW+ RF V DTL +
Sbjct: 3 QRTLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVW 62
Query: 60 KYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKL 119
KY + DSVL V KD Y +CNT P +GD++ KL+RSGP++FISG+ +C +G+KL
Sbjct: 63 KYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKL 122
Query: 120 IVVVLHER 127
+VV+ R
Sbjct: 123 HIVVMSSR 130
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 9 LSLALFAFFISSSHALKFNVGG-KHGW---VTNPGENYNKWSGRNRFLVNDTLFFKYKKG 64
L + IS+S A K+ VGG + W ++ P ++ + W+ +RF + DTL FKY+K
Sbjct: 12 LVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKP-DSLSHWANSHRFKIGDTLIFKYEKR 70
Query: 65 SDSVLLVNKDDYDSCNTK-KPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 123
++SV N+ DY+ CNT K + + G+++ L + G +FISGN HCQ G KL V+V
Sbjct: 71 TESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 130
Query: 124 L 124
+
Sbjct: 131 I 131
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 44 KWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPF 103
+W+ +F+V DT+ F+Y ++SV V ++DYD C + + G++ L ++G
Sbjct: 48 RWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIH 107
Query: 104 YFISGNHDHCQKGQKLIVVVL 124
+FISG HC+ G KL VVV+
Sbjct: 108 HFISGKKRHCRLGLKLAVVVM 128
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 60 KYKKGSDSVLLVNKDDYDSCNT--KKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQ 117
KY + ++SV VN+ DY+ CNT K+ +L + G+++ L +SG +FISGN HCQ G
Sbjct: 1 KYDERTESVHEVNETDYEQCNTVGKEHVL-FNDGNTKVMLTKSGFRHFISGNQSHCQMGL 59
Query: 118 KLIVVVL 124
KL+VVV+
Sbjct: 60 KLMVVVM 66
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus
GN=Pkd1l3 PE=2 SV=2
Length = 2201
Score = 38.5 bits (88), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 128 PPPPSTGPPTTKPPPHA----PSPKSPSPAT-QPPATSPSTSPTSHAPSAN-PPKG---- 177
PP +T + PP P+ SP+ T + PA+S T TS P++N PP+G
Sbjct: 408 PPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSPPQGTSDT 467
Query: 178 ---SSPTPATSPSTSSPYPPKGYSPVPATSPSTSPSSHAP-SPYPPKGYSPVPATSPSTS 233
SSPT T+ + S PP+ S PA+S +S P S PP+ S PA+S
Sbjct: 468 PGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETPASSSPPQ 527
Query: 234 PSSSQSPAANAPTGLSPAPGTSPSTSPSSQPPAANAPTGL-SPAPGTSPSTSPSSQPPAA 292
+S S + + P +S P +S +S+ PA+++PT + S P +S T+ +S PA+
Sbjct: 528 VTSDTSASISPPQVISDTPASSSPPQVTSETPASSSPTNMTSDTPASSSPTNMTSDTPAS 587
Query: 293 NAPTGVS 299
++PT ++
Sbjct: 588 SSPTNMT 594
>sp|Q9JIK1|CDHR5_RAT Cadherin-related family member 5 OS=Rattus norvegicus GN=Cdhr5 PE=1
SV=1
Length = 862
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 86/197 (43%), Gaps = 46/197 (23%)
Query: 160 SPSTSPTSHAPSANPPKGSSPTPATSPSTSSPYPPKGYSPVPATSPSTSPSSHAPSPYPP 219
+PSTS TS P+ GS + P+PP G + P TS T P
Sbjct: 484 TPSTSGTSQGPATTSSGGS----------AGPFPPAGTTLSPLTSAPTVPGGS------- 526
Query: 220 KGYSPVPATSPSTSPSSSQSPAANAPTGLSPAPGTS------PSTSPSSQPPAANAPTGL 273
P STSP ++ +P +A +P PGTS P S SSQP + +
Sbjct: 527 ------PTLGISTSPQTA-TPGGDATQ--TPKPGTSQPMVPTPGASTSSQPATPSGSSTQ 577
Query: 274 SPAPGTS------PSTSPSSQPPAANAPTGVSPPPGTSPSTSPPAVPSSPGNAPSLAPSN 327
+P PGTS P S SSQP + + +P PG TS P VP +PG + S P
Sbjct: 578 TPKPGTSQPMVPTPGASTSSQPATPSGSSTQTPRPG----TSQPMVP-TPGASTSSQP-- 630
Query: 328 SSNPAGGTPPPSPSGSQ 344
+ P+G T P P SQ
Sbjct: 631 -ATPSGSTQTPKPGTSQ 646
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.124 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,201,070
Number of Sequences: 539616
Number of extensions: 11410357
Number of successful extensions: 352794
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3592
Number of HSP's successfully gapped in prelim test: 7048
Number of HSP's that attempted gapping in prelim test: 68942
Number of HSP's gapped (non-prelim): 94233
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 62 (28.5 bits)