Query 016941
Match_columns 380
No_of_seqs 137 out of 884
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 06:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016941.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016941hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 9.9E-41 3.4E-45 289.1 4.8 109 22-130 2-113 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 8.4E-39 2.9E-43 266.6 5.4 107 22-128 1-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 2.1E-37 7.3E-42 260.8 6.0 106 24-129 2-109 (116)
4 2cbp_A Cucumber basic protein; 100.0 2.8E-36 9.5E-41 246.0 6.2 96 24-124 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 2.9E-32 9.9E-37 220.7 7.8 91 24-124 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 2.8E-12 9.7E-17 106.8 8.6 96 21-124 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 1E-11 3.5E-16 94.9 6.8 86 24-124 3-91 (91)
8 1iuz_A Plastocyanin; electron 99.1 1.8E-10 6.2E-15 90.6 6.4 92 23-124 1-98 (98)
9 2cal_A Rusticyanin; iron respi 99.0 1.9E-10 6.4E-15 99.5 6.0 76 48-124 62-154 (154)
10 2aan_A Auracyanin A; cupredoxi 99.0 1.7E-09 5.8E-14 90.1 10.8 95 21-124 16-139 (139)
11 2gim_A Plastocyanin; beta shee 99.0 3.2E-10 1.1E-14 89.2 5.7 91 24-124 4-105 (106)
12 1plc_A Plastocyanin; electron 99.0 1.4E-09 4.8E-14 85.0 8.3 90 25-124 2-99 (99)
13 2plt_A Plastocyanin; electron 99.0 6E-10 2.1E-14 86.5 5.9 92 23-124 1-98 (98)
14 1kdj_A Plastocyanin; electron 99.0 1.6E-09 5.3E-14 85.0 7.8 90 25-124 2-102 (102)
15 1pmy_A Pseudoazurin; electron 99.0 1.5E-09 5E-14 91.1 8.0 83 29-126 11-95 (123)
16 1paz_A Pseudoazurin precursor; 98.9 1.8E-09 6.2E-14 90.5 7.7 83 29-126 11-95 (123)
17 1byp_A Protein (plastocyanin); 98.9 4.6E-09 1.6E-13 81.9 8.1 90 25-124 2-99 (99)
18 1b3i_A PETE protein, protein ( 98.9 4.1E-09 1.4E-13 81.9 7.4 89 24-124 3-97 (97)
19 1pcs_A Plastocyanin; electron 98.8 3.7E-09 1.3E-13 82.3 5.0 91 24-124 3-98 (98)
20 3erx_A Pseudoazurin; copper pr 98.8 7.4E-09 2.5E-13 87.2 6.7 80 31-125 13-94 (123)
21 3ef4_A Pseudoazurin, blue copp 98.8 1.3E-08 4.5E-13 86.3 8.2 82 29-125 10-95 (124)
22 3tu6_A Pseudoazurin (blue copp 98.8 1.1E-08 3.9E-13 86.6 7.7 85 28-127 11-98 (127)
23 3c75_A Amicyanin; copper prote 98.6 9.7E-08 3.3E-12 80.1 7.2 77 33-124 54-132 (132)
24 3cvb_A Plastocyanin; cupredoxi 98.4 9E-07 3.1E-11 69.0 7.4 89 24-124 3-104 (105)
25 3ay2_A Lipid modified azurin p 98.3 1.9E-06 6.4E-11 76.6 9.0 92 24-124 43-166 (167)
26 4hci_A Cupredoxin 1; structura 98.3 5.8E-07 2E-11 70.9 4.2 66 48-124 29-100 (100)
27 2ux6_A Pseudoazurin; type-1 co 98.2 2E-06 6.9E-11 71.8 6.8 85 25-126 4-93 (122)
28 1cuo_A Protein (azurin ISO-2); 98.2 1E-05 3.4E-10 68.6 10.4 91 25-124 4-128 (129)
29 2ov0_A Amicyanin; beta-sandwic 98.1 3.2E-06 1.1E-10 67.5 5.9 82 23-124 18-105 (105)
30 1id2_A Amicyanin; beta barrel, 98.1 5.2E-06 1.8E-10 66.7 5.8 77 33-124 28-106 (106)
31 2iaa_C Azurin; quinoprotein, t 98.0 3.1E-05 1.1E-09 65.6 9.5 91 25-124 3-127 (128)
32 1nwp_A Azurin; electron transp 98.0 2.4E-05 8.1E-10 66.3 8.5 91 25-124 4-128 (128)
33 2ccw_A Azurin II, AZN-2; elect 98.0 2.9E-05 1E-09 65.7 9.1 91 25-124 4-128 (129)
34 1iko_P Ephrin-B2; greek KEY, g 97.6 2.2E-05 7.6E-10 71.1 2.1 80 50-129 25-144 (178)
35 1iby_A Nitrosocyanin; RED copp 97.3 0.00029 9.9E-09 56.2 5.3 66 48-124 39-111 (112)
36 2cua_A Protein (CUA); CUA cent 97.2 0.00095 3.3E-08 56.8 7.4 81 24-124 46-134 (135)
37 2x11_B Ephrin-A5; receptor-sig 97.1 0.0012 4.3E-08 59.8 7.9 77 49-128 52-165 (177)
38 3fsa_A Azurin; copper, cupredo 96.6 0.014 4.8E-07 50.0 9.9 88 25-124 4-125 (125)
39 2vsm_B Ephrin-B2; developmenta 96.5 0.002 6.7E-08 56.3 4.3 76 50-125 24-139 (140)
40 3czu_B Ephrin-A1; ATP-binding, 96.2 0.015 5.3E-07 52.9 8.3 98 20-128 26-163 (182)
41 2dv6_A Nitrite reductase; elec 95.4 0.015 5.1E-07 56.1 5.1 74 47-127 55-134 (447)
42 3d12_B Ephrin-B3; beta propell 95.2 0.019 6.6E-07 50.2 4.7 74 50-124 23-140 (141)
43 3s8f_B Cytochrome C oxidase su 95.0 0.053 1.8E-06 48.2 7.3 67 47-124 93-167 (168)
44 1shx_A Ephrin-A5; ephrin signa 94.9 0.047 1.6E-06 47.7 6.3 76 49-127 23-135 (138)
45 3sbq_A Nitrous-oxide reductase 93.8 0.075 2.6E-06 56.1 6.2 68 47-125 558-637 (638)
46 1fwx_A Nitrous oxide reductase 93.4 0.1 3.4E-06 54.5 6.3 68 48-126 514-593 (595)
47 2wo3_B Ephrin-A2; transferase- 93.0 0.082 2.8E-06 47.1 4.3 76 49-128 32-146 (157)
48 3gdc_A Multicopper oxidase; be 87.8 0.39 1.3E-05 44.3 4.0 77 48-125 196-288 (288)
49 3hei_B Ephrin-A1; EPH receptor 87.3 0.71 2.4E-05 40.1 5.0 35 49-83 22-67 (132)
50 1mzy_A Copper-containing nitri 86.8 0.72 2.5E-05 43.0 5.1 75 49-126 66-153 (333)
51 1oe1_A Dissimilatory copper-co 85.3 0.83 2.8E-05 42.6 4.7 75 49-126 67-153 (336)
52 3hb3_B Cytochrome C oxidase su 83.9 2.6 8.9E-05 40.6 7.6 31 94-126 232-265 (298)
53 1kbv_A ANIA, major outer membr 82.4 1.2 4E-05 41.9 4.4 76 48-126 71-157 (327)
54 2zoo_A Probable nitrite reduct 82.3 0.8 2.7E-05 44.2 3.4 77 48-127 61-148 (442)
55 1mzy_A Copper-containing nitri 78.7 3.6 0.00012 38.3 6.4 33 94-126 286-319 (333)
56 2bw4_A Copper-containing nitri 78.7 2.1 7.1E-05 39.9 4.8 75 49-126 73-159 (340)
57 1fft_B Ubiquinol oxidase; elec 78.5 4.6 0.00016 39.1 7.3 66 47-124 151-225 (315)
58 3kw8_A Laccase, putative coppe 72.0 7 0.00024 35.7 6.3 81 48-128 169-268 (276)
59 1cyx_A CYOA; electron transpor 70.6 5.5 0.00019 36.7 5.2 65 48-124 42-115 (205)
60 1v10_A Laccase; multicopper bl 70.4 12 0.0004 37.5 8.1 34 94-127 117-151 (521)
61 1kbv_A ANIA, major outer membr 69.8 4.3 0.00015 38.0 4.5 34 94-127 275-309 (327)
62 2zoo_A Probable nitrite reduct 68.6 10 0.00034 36.6 6.9 35 94-128 265-300 (442)
63 3gdc_A Multicopper oxidase; be 68.4 7.7 0.00026 35.6 5.8 79 48-127 67-156 (288)
64 3cg8_A Laccase; oxidoreductase 67.4 7.7 0.00026 36.8 5.8 79 48-128 210-309 (343)
65 2gsm_B Cytochrome C oxidase su 65.8 9.3 0.00032 35.8 5.9 65 49-125 173-246 (262)
66 3iuw_A Activating signal coint 64.5 4.2 0.00014 32.8 2.8 16 49-64 36-52 (83)
67 3g5w_A Multicopper oxidase typ 63.9 8.6 0.00029 36.1 5.3 34 94-127 239-278 (318)
68 1sdd_B Coagulation factor V; c 63.0 8.3 0.00028 39.4 5.3 76 48-125 240-327 (647)
69 2dv6_A Nitrite reductase; elec 60.8 8 0.00027 37.1 4.6 75 48-125 196-281 (447)
70 1oe1_A Dissimilatory copper-co 58.1 5.3 0.00018 37.1 2.7 34 94-127 286-320 (336)
71 1yel_A AT1G16640; CESG, protei 58.1 2.1 7.3E-05 34.0 0.0 19 46-64 73-91 (104)
72 3l6w_A Hemocyanin 1; cupredoxi 57.7 6.1 0.00021 40.7 3.3 71 49-124 413-491 (491)
73 4i1k_A B3 domain-containing tr 57.1 2.6 9E-05 36.2 0.4 26 46-71 112-137 (146)
74 3tas_A Small laccase, multi-co 55.9 35 0.0012 31.7 7.9 32 98-129 244-275 (313)
75 2zwn_A Two-domain type laccase 54.0 14 0.00047 34.8 4.8 71 48-125 36-126 (339)
76 2bw4_A Copper-containing nitri 51.5 34 0.0012 31.7 7.0 34 94-127 292-326 (340)
77 1sdd_A Coagulation factor V; c 51.4 2.1 7.2E-05 39.7 -1.2 33 94-126 269-301 (306)
78 3t9w_A Small laccase, multi-co 51.2 38 0.0013 31.4 7.3 31 98-128 260-290 (299)
79 3abg_A Bilirubin oxidase; clea 48.7 46 0.0016 33.5 8.0 102 24-127 350-477 (534)
80 2r7e_B Coagulation factor VIII 47.2 2.9 0.0001 44.4 -1.0 72 49-124 370-455 (770)
81 1v54_B Cytochrome C oxidase po 44.7 13 0.00044 34.2 2.9 30 94-125 183-215 (227)
82 3g5w_A Multicopper oxidase typ 44.4 20 0.00069 33.5 4.3 77 48-126 35-126 (318)
83 3zx1_A Oxidoreductase, putativ 43.9 26 0.0009 35.1 5.3 75 49-124 387-480 (481)
84 2r7e_A Coagulation factor VIII 43.8 10 0.00035 40.0 2.4 76 49-126 628-712 (742)
85 1aoz_A Ascorbate oxidase; oxid 42.3 50 0.0017 33.0 7.1 78 48-127 35-125 (552)
86 2uxt_A Protein SUFI, SUFI; oxi 41.0 19 0.00063 35.4 3.6 72 49-127 52-140 (451)
87 1zpu_A Iron transport multicop 39.5 34 0.0012 34.4 5.3 73 48-127 35-126 (534)
88 2q9o_A Laccase-1; multicopper 39.2 28 0.00096 35.1 4.7 73 48-127 68-159 (559)
89 3t6v_A Laccase; beta barrel, o 39.1 48 0.0016 33.2 6.3 72 48-126 36-130 (495)
90 2xu9_A Laccase; oxidoreductase 38.7 42 0.0014 32.5 5.7 74 48-126 48-136 (439)
91 3pxl_A Laccase; 4-copper prote 37.6 79 0.0027 31.7 7.6 72 48-126 35-129 (499)
92 1dbg_A Chondroitinase B; beta 37.3 2.4 8.3E-05 43.2 -3.4 30 1-30 1-30 (506)
93 2j5w_A Ceruloplasmin, ferroxid 34.3 34 0.0012 37.5 4.7 79 48-127 971-1060(1065)
94 3bqu_C 3H6 FAB light chain; be 33.0 15 0.00052 30.2 1.4 13 49-61 33-45 (233)
95 3sob_L Antibody light chain; b 32.5 1E+02 0.0036 24.9 6.3 15 49-63 34-48 (237)
96 2j5w_A Ceruloplasmin, ferroxid 31.5 59 0.002 35.6 5.9 75 48-127 272-358 (1065)
97 3sqr_A Laccase; multicopper ox 31.0 62 0.0021 33.3 5.8 35 93-127 155-189 (580)
98 2xu9_A Laccase; oxidoreductase 30.7 64 0.0022 31.3 5.5 75 49-123 350-438 (439)
99 3tas_A Small laccase, multi-co 29.7 80 0.0027 29.2 5.8 16 49-64 44-59 (313)
100 2r7e_A Coagulation factor VIII 28.4 40 0.0014 35.6 3.9 33 94-126 298-330 (742)
101 2z0t_A Putative uncharacterize 27.3 21 0.00071 29.8 1.2 11 49-59 32-42 (109)
102 2vtc_A CEL61B, cellulase; hydr 27.2 2E+02 0.0069 26.6 8.0 15 49-63 89-103 (249)
103 1wid_A DNA-binding protein RAV 26.5 12 0.00041 31.2 -0.3 17 47-63 88-104 (130)
104 1hfu_A Laccase 1; oxidoreducta 25.5 1.1E+02 0.0037 30.3 6.2 79 49-127 36-130 (503)
105 3kw8_A Laccase, putative coppe 24.8 79 0.0027 28.7 4.7 77 49-127 38-142 (276)
106 2vgd_A Enxyn11A; glycoside hyd 24.8 17 0.00057 34.1 0.2 46 1-48 1-46 (218)
107 3nb3_A Outer membrane protein 24.8 18 0.00061 33.0 0.4 11 25-35 27-37 (346)
108 1sdd_A Coagulation factor V; c 24.8 1.1E+02 0.0037 28.2 5.7 77 49-126 62-167 (306)
109 4gb7_A 6-aminohexanoate-dimer 24.7 14 0.00047 35.5 -0.4 11 1-11 4-14 (422)
110 2c3v_A Alpha-amylase G-6; carb 24.7 36 0.0012 28.0 2.2 40 25-65 26-71 (102)
111 2kbn_A Conserved protein; nucl 24.7 46 0.0016 26.8 2.8 33 24-61 37-71 (109)
112 2g23_A PHS, phenoxazinone synt 24.6 78 0.0027 32.8 5.2 34 94-127 559-593 (612)
113 3t6v_A Laccase; beta barrel, o 24.5 1.5E+02 0.005 29.6 7.0 31 94-124 440-470 (495)
114 2l55_A SILB,silver efflux prot 24.5 43 0.0015 26.2 2.5 24 43-66 40-63 (82)
115 2qcp_X Cation efflux system pr 22.9 44 0.0015 25.9 2.3 18 48-65 51-68 (80)
116 4he6_A Peptidase family U32; u 22.5 47 0.0016 25.6 2.4 18 47-64 26-43 (89)
117 1whl_A Cylindromatosis tumor s 22.4 51 0.0017 26.6 2.6 15 49-63 6-20 (95)
118 2vb2_X Copper protein, cation 21.6 47 0.0016 26.3 2.2 23 43-65 54-76 (88)
119 3aw5_A Multicopper oxidase; be 21.3 38 0.0013 33.2 2.0 74 48-128 39-129 (448)
120 2r7e_B Coagulation factor VIII 21.1 66 0.0023 34.2 3.9 76 49-127 201-299 (770)
121 1xne_A Hypothetical protein PF 20.6 27 0.00091 29.3 0.6 13 49-61 33-45 (113)
122 2laa_A Beta/alpha-amylase; SBD 20.6 56 0.0019 26.9 2.5 33 32-64 27-65 (104)
123 2k75_A Uncharacterized protein 20.5 35 0.0012 27.4 1.3 30 25-61 41-70 (106)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=9.9e-41 Score=289.12 Aligned_cols=109 Identities=25% Similarity=0.501 Sum_probs=100.8
Q ss_pred cceEEEecCCCCCccCCC-CCcccccCCCeEecCceeeeeeecCCceEEEe-cccCCCCCCCCCCccccCCCCcEEEe-c
Q 016941 22 HALKFNVGGKHGWVTNPG-ENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLV-NKDDYDSCNTKKPLLKLDSGDSEFKL-D 98 (380)
Q Consensus 22 sA~tyvVGGs~GWt~~P~-~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveV-nK~dYdsCn~snpI~~fSsGndvVtL-d 98 (380)
+|++|+|||+.||++.+. .||++|+++++|+|||+|+|+|..++|+|+|| ++++|+.|+..+++..+++|+++|+| +
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~ 81 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLD 81 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEecc
Confidence 578999999999998643 78999999999999999999999999999999 99999999999999999999999999 9
Q ss_pred cccceEEEeCCCCcCCCCCeEEEEecCCCCCC
Q 016941 99 RSGPFYFISGNHDHCQKGQKLIVVVLHERPPP 130 (380)
Q Consensus 99 kpG~yYFICGV~gHCq~GMKLaInV~asss~p 130 (380)
++|+|||||++.+||++||||+|+|......+
T Consensus 82 ~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~ 113 (138)
T 1jer_A 82 ELGMHYFVCTVGTHCSNGQKLSINVVAANATV 113 (138)
T ss_dssp SSEEEEEECCSTTTGGGTCEEEEEEECCC---
T ss_pred CCcCEEEEcCCCCccccCCEEEEEEcCCCCCC
Confidence 99999999999999999999999999876543
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=8.4e-39 Score=266.57 Aligned_cols=107 Identities=36% Similarity=0.693 Sum_probs=99.5
Q ss_pred cceEEEecCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCccccCCCCcEEEecccc
Q 016941 22 HALKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSG 101 (380)
Q Consensus 22 sA~tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI~~fSsGndvVtLdkpG 101 (380)
+|++|+|||+.||++.+..||++||++++|+|||+|+|+|..+.|+|+||++++|+.|+..+++..+++|+++|+|+++|
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 80 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPG 80 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSE
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCc
Confidence 46789999999999865689999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCCCCcCCCCCeEEEEecCCCC
Q 016941 102 PFYFISGNHDHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 102 ~yYFICGV~gHCq~GMKLaInV~asss 128 (380)
++||||++.+||++||||+|+|.+..+
T Consensus 81 ~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 81 TFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 999999999999999999999987653
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=2.1e-37 Score=260.83 Aligned_cols=106 Identities=31% Similarity=0.624 Sum_probs=96.6
Q ss_pred eEEEecCCCCCccC-CCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCccccCCCCcEEEeccccc
Q 016941 24 LKFNVGGKHGWVTN-PGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGP 102 (380)
Q Consensus 24 ~tyvVGGs~GWt~~-P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI~~fSsGndvVtLdkpG~ 102 (380)
++|+|||+.||++. ...||++|+++++|+|||+|+|+|..++|+|+||++++|+.|+..+++..+++|+++|+|+++|+
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 81 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGP 81 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCC
Confidence 47999999999975 35789999999999999999999999999999999999999999999988999999999999999
Q ss_pred eEEEeCCCCcCCCCCeEEE-EecCCCCC
Q 016941 103 FYFISGNHDHCQKGQKLIV-VVLHERPP 129 (380)
Q Consensus 103 yYFICGV~gHCq~GMKLaI-nV~asss~ 129 (380)
+||||++.+||++||||+| +|...+..
T Consensus 82 ~yFic~~~~HC~~Gmkl~In~V~~~~~~ 109 (116)
T 1x9u_A 82 QYYICTVGDHCRVGQKLSINVVGAGGAG 109 (116)
T ss_dssp EEEECCSTTTTTTTCEEEEEEECC----
T ss_pred EEEECCCCCccccCCEEEEEEECCCCCC
Confidence 9999999999999999999 78766543
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.8e-36 Score=245.95 Aligned_cols=96 Identities=35% Similarity=0.670 Sum_probs=91.9
Q ss_pred eEEEecCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCccccCCCCcEEEeccccce
Q 016941 24 LKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPF 103 (380)
Q Consensus 24 ~tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI~~fSsGndvVtLdkpG~y 103 (380)
++|+|||+.||++ +|++|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+| ++|++
T Consensus 1 ~~~~VG~~~GW~~----~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~~ 75 (96)
T 2cbp_A 1 AVYVVGGSGGWTF----NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQS 75 (96)
T ss_dssp CEEETTGGGCSCS----SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEEE
T ss_pred CEEEECCcCCCcc----ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCCE
Confidence 3699999999986 699999999999999999999999999999999999999999999889999999999 89999
Q ss_pred EEEeCCCCcCCCCCeEEEEec
Q 016941 104 YFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 104 YFICGV~gHCq~GMKLaInV~ 124 (380)
||||++++||++||||+|+|+
T Consensus 76 yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 76 YFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEECCSTTTGGGTCEEEEEEC
T ss_pred EEEcCCCCccccCCEEEEEEC
Confidence 999999999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=2.9e-32 Score=220.66 Aligned_cols=91 Identities=33% Similarity=0.581 Sum_probs=85.6
Q ss_pred eEEEecCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCccccCCCCcEEEeccccce
Q 016941 24 LKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPF 103 (380)
Q Consensus 24 ~tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI~~fSsGndvVtLdkpG~y 103 (380)
++|+| ||+++ ++|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+|+ +|++
T Consensus 1 ~~y~V----gW~~~-----~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~~ 70 (91)
T 1f56_A 1 AVYNI----GWSFN-----VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQN 70 (91)
T ss_dssp CEEEE----ECSSS-----CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEEE
T ss_pred CEEEE----eCCCC-----CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCCe
Confidence 36889 79873 89999999999999999999999999999999999999999998899999999996 8999
Q ss_pred EEEeCCCCcCCCCCeEEEEec
Q 016941 104 YFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 104 YFICGV~gHCq~GMKLaInV~ 124 (380)
||||++++||++||||+|+|.
T Consensus 71 yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 71 YFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEECCSTTTTTTTCEEEEEEC
T ss_pred EEEcCCCCccccCCEEEEEEC
Confidence 999999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.33 E-value=2.8e-12 Score=106.76 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=66.6
Q ss_pred ccceEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-----CCceEEEeccc-CCCC--------------C
Q 016941 21 SHALKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-----GSDSVLLVNKD-DYDS--------------C 79 (380)
Q Consensus 21 AsA~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-----G~HSVveVnK~-dYds--------------C 79 (380)
+..+++.|+-. ++|.|.| ...+++.||+|+|.|.+ ..|+++..+.. ++.. +
T Consensus 14 ~~~~~v~V~~~~~~~~F~P--------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ--------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFV 85 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC--------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTC
T ss_pred CCCEEEEEEEeCCCceEeC--------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccccccc
Confidence 34467888753 4698865 36799999999999977 46998876422 1111 0
Q ss_pred ---CCCCCc---cccCCC---CcEEEeccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 80 ---NTKKPL---LKLDSG---DSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 ---n~snpI---~~fSsG---ndvVtLdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....| ..+|+++++|.|||+|++.+||+.|||..|+|.
T Consensus 86 ~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 86 PPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000100 112333 346888999999999999999999999999985
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.25 E-value=1e-11 Score=94.88 Aligned_cols=86 Identities=16% Similarity=0.248 Sum_probs=63.1
Q ss_pred eEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-CCceEEEecccCCCCCCCCCCccccCCC-CcEEEeccc
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-GSDSVLLVNKDDYDSCNTKKPLLKLDSG-DSEFKLDRS 100 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-G~HSVveVnK~dYdsCn~snpI~~fSsG-ndvVtLdkp 100 (380)
.++.||++ .+|.|.|. ..++++||+|+|.+.. ..|+|......++. . ....+..| ...++++++
T Consensus 3 ~~v~~~~~~~~~~f~P~--------~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~----~~~~~~~g~~~~~~f~~~ 69 (91)
T 1bxv_A 3 VAIKMGADNGMLAFEPS--------TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-H----KDLAFSPGETFEATFSEP 69 (91)
T ss_dssp EEEEESCTTSCSSEESS--------EEEECTTCEEEEEECSSCCEEEEETTCGGGC-E----EEEECSTTCEEEEECCSC
T ss_pred EEEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCcEEEEeCCCccC-c----ccceeCCCCEEEEEeCCC
Confidence 35677764 56888663 5789999999999875 57999875533221 0 11123444 357889999
Q ss_pred cceEEEeCCCCcCCCCCeEEEEec
Q 016941 101 GPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 101 G~yYFICGV~gHCq~GMKLaInV~ 124 (380)
|.|+|+|. .||..||+..|.|.
T Consensus 70 G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 70 GTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEEeC--CCccCCCEEEEEEC
Confidence 99999999 79999999999983
No 8
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=99.07 E-value=1.8e-10 Score=90.59 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=64.2
Q ss_pred ceEEEecC-CCCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecc---cCCCCCCCCCCccccCCCC-cEEE
Q 016941 23 ALKFNVGG-KHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNK---DDYDSCNTKKPLLKLDSGD-SEFK 96 (380)
Q Consensus 23 A~tyvVGG-s~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK---~dYdsCn~snpI~~fSsGn-dvVt 96 (380)
+.++.+|+ +.++.|.|. ..++++||+|+|.+... .|+|...+. +.++.+...........|. .+++
T Consensus 1 ~~~V~m~~~~~~~~F~P~--------~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~t 72 (98)
T 1iuz_A 1 AQIVKLGGDDGSLAFVPS--------KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRK 72 (98)
T ss_dssp CEEEEESCTTSCCSEESS--------EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred CEEEEEecCCCCcEEeCC--------EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEE
Confidence 35667765 456888663 57899999999998764 799987532 1233322211111234454 4788
Q ss_pred eccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 97 LDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 97 LdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++|.|+|+|.. ||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 73 LSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred cCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999999996 9999999999983
No 9
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.04 E-value=1.9e-10 Score=99.46 Aligned_cols=76 Identities=13% Similarity=0.220 Sum_probs=59.0
Q ss_pred CCeEecCceeeeeeecC----CceEEEec-ccCCCCCCCCCCccc-------cCCCC---c--EEEeccccceEEEeCCC
Q 016941 48 RNRFLVNDTLFFKYKKG----SDSVLLVN-KDDYDSCNTKKPLLK-------LDSGD---S--EFKLDRSGPFYFISGNH 110 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG----~HSVveVn-K~dYdsCn~snpI~~-------fSsGn---d--vVtLdkpG~yYFICGV~ 110 (380)
..++++||+|+|+|.+. .|+++.++ ...|+.|.....+.. ...|. . +|++ ++|+|||+|...
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 46899999999999764 49998885 457878876543321 12333 2 5678 999999999999
Q ss_pred CcCCCCCeEEEEec
Q 016941 111 DHCQKGQKLIVVVL 124 (380)
Q Consensus 111 gHCq~GMKLaInV~ 124 (380)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999883
No 10
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.02 E-value=1.7e-09 Score=90.10 Aligned_cols=95 Identities=14% Similarity=0.236 Sum_probs=66.5
Q ss_pred ccceEEEecC-CCCCccCCCCCcccccCCCeEecCceeeeeeecC----CceEEEeccc------------------CCC
Q 016941 21 SHALKFNVGG-KHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG----SDSVLLVNKD------------------DYD 77 (380)
Q Consensus 21 AsA~tyvVGG-s~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG----~HSVveVnK~------------------dYd 77 (380)
+..+++.||. ..+|.|.|. .++++.||+++|.|.+. .|+++....+ +|.
T Consensus 16 ~~~~~V~v~~~~~~~~F~p~--------~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~ 87 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDKT--------ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYL 87 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSCS--------EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTC
T ss_pred CcCEEEEEEecCCccEEcCC--------eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhccccccccc
Confidence 3445777852 346877653 57899999999998764 6998877532 566
Q ss_pred CCCCCCCc---cccCCCCc---EEEeccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 78 SCNTKKPL---LKLDSGDS---EFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 78 sCn~snpI---~~fSsGnd---vVtLdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
.|+..+.+ ..+..|.. +|+++++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 88 p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 88 PADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 66533211 12344543 455568999999999999999 999999883
No 11
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.01 E-value=3.2e-10 Score=89.22 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=61.7
Q ss_pred eEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-CCceEEEecccCCC-----CCCCCCCccccCCCC-cEE
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-GSDSVLLVNKDDYD-----SCNTKKPLLKLDSGD-SEF 95 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-G~HSVveVnK~dYd-----sCn~snpI~~fSsGn-dvV 95 (380)
.++.||.+ .+|.|.|. ..++++||+|+|.+.. ..|+|...+....+ .+...........|. .+|
T Consensus 4 ~~V~~~~~~~~~~F~P~--------~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~ 75 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEPA--------KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTST 75 (106)
T ss_dssp EEEEESCTTCCSSEESS--------EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEE
T ss_pred EEEEEEecCCcceEcCC--------EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEEE
Confidence 36778754 67888663 5789999999999765 46998764322110 000000011233443 478
Q ss_pred Ee---ccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 96 KL---DRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 96 tL---dkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++ +++|.|+|+|. .||+.||+..|+|.
T Consensus 76 ~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 76 TFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp ECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 88 89999999999 89999999999985
No 12
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.98 E-value=1.4e-09 Score=85.04 Aligned_cols=90 Identities=18% Similarity=0.249 Sum_probs=62.2
Q ss_pred EEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEeccc---CCCCCCCC--CCccccCCCC-cEEE
Q 016941 25 KFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNKD---DYDSCNTK--KPLLKLDSGD-SEFK 96 (380)
Q Consensus 25 tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK~---dYdsCn~s--npI~~fSsGn-dvVt 96 (380)
++.||++ .++.|.|. ..++++||+|+|++... .|+|...+.. +++.++.. ..-.....|. .+++
T Consensus 2 ~v~m~~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~t 73 (99)
T 1plc_A 2 DVLLGADDGSLAFVPS--------EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVA 73 (99)
T ss_dssp EEEESCTTCCSCEESS--------EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEE
T ss_pred EEEEecCCCcceEeCC--------EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEE
Confidence 5677754 55777653 57899999999988764 6999775431 12222110 0001233444 4789
Q ss_pred eccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 97 LDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 97 LdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++|.|+|+|. .||+.||+..|+|.
T Consensus 74 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 74 LSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999999 79999999999983
No 13
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.97 E-value=6e-10 Score=86.52 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=63.4
Q ss_pred ceEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecc---cCCCCCCCCCCccccCCCC-cEEE
Q 016941 23 ALKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNK---DDYDSCNTKKPLLKLDSGD-SEFK 96 (380)
Q Consensus 23 A~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK---~dYdsCn~snpI~~fSsGn-dvVt 96 (380)
+.++.+|++ .++.|.|. ..++++||+|+|.+... .|+|...+. ++++.+...........|. .+++
T Consensus 1 ~~~V~m~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 2plt_A 1 DATVKLGADSGALEFVPK--------TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVK 72 (98)
T ss_dssp CEEEEESCTTCCSSEESS--------EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred CEEEEEecCCCCceEeCC--------EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEE
Confidence 356778754 56887653 57899999999988764 699876532 1222221111111234454 4788
Q ss_pred eccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 97 LDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 97 LdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 73 LTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred eCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999999 79999999999983
No 14
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.96 E-value=1.6e-09 Score=84.96 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=62.3
Q ss_pred EEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-CCceEEEecccCCC----CCCCCC----CccccCCCC-c
Q 016941 25 KFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-GSDSVLLVNKDDYD----SCNTKK----PLLKLDSGD-S 93 (380)
Q Consensus 25 tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-G~HSVveVnK~dYd----sCn~sn----pI~~fSsGn-d 93 (380)
++.||.+ .++.|.|. ..++++||+|+|.+.. ..|+|+....+.++ .|+... .......|. .
T Consensus 2 ~V~~g~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~ 73 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYPD--------SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSF 73 (102)
T ss_dssp EEEESCTTCCCCEESS--------EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEE
T ss_pred EEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEE
Confidence 5678864 55777653 5789999999999765 36998875433332 111100 111234443 4
Q ss_pred EEEeccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 94 EFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+++++++|.|+|+|. .||+.||+..|.|.
T Consensus 74 ~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 74 KAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 788899999999999 89999999999983
No 15
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.96 E-value=1.5e-09 Score=91.08 Aligned_cols=83 Identities=22% Similarity=0.275 Sum_probs=60.6
Q ss_pred cCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCC-ccccCCCC-cEEEeccccceEEE
Q 016941 29 GGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKP-LLKLDSGD-SEFKLDRSGPFYFI 106 (380)
Q Consensus 29 GGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snp-I~~fSsGn-dvVtLdkpG~yYFI 106 (380)
|+++++.|.|. ..++++||+|+|.+....|+|+... .|...+. ......|. .+|+++++|.|+|+
T Consensus 11 g~~g~~~F~P~--------~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~ 77 (123)
T 1pmy_A 11 GPGGMMVFDPA--------LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFK 77 (123)
T ss_dssp ETTEEEEEESS--------EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEE
T ss_pred cCCCCceEeCC--------EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEE
Confidence 55556877663 5789999999999988789998642 2222211 11112333 47999999999999
Q ss_pred eCCCCcCCCCCeEEEEecCC
Q 016941 107 SGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 107 CGV~gHCq~GMKLaInV~as 126 (380)
|. .||..||+..|+|...
T Consensus 78 C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 78 CA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CS--TTTTTTCEEEEEESSC
T ss_pred eC--CccccCCEEEEEEcCC
Confidence 98 4999999999999854
No 16
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.93 E-value=1.8e-09 Score=90.49 Aligned_cols=83 Identities=14% Similarity=0.164 Sum_probs=60.1
Q ss_pred cCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCC-ccccCCCC-cEEEeccccceEEE
Q 016941 29 GGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKP-LLKLDSGD-SEFKLDRSGPFYFI 106 (380)
Q Consensus 29 GGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snp-I~~fSsGn-dvVtLdkpG~yYFI 106 (380)
|+++++.|.|. ..++++||+|+|.+....|+|+.. +.|...+. ......|. .+|+++++|.|+|+
T Consensus 11 g~~g~~~F~P~--------~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~ 77 (123)
T 1paz_A 11 GAEGAMVFEPA--------YIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFKSKINENYVLTVTQPGAYLVK 77 (123)
T ss_dssp ETTEEEEEESS--------EEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCBCCTTCCEEEECCSCEEEEEE
T ss_pred cCCCCceEeCC--------EEEECCCCEEEEEECCCCeEEEEe-----cccCCCCccceecCCCCEEEEEeCCCEEEEEE
Confidence 55555777663 579999999999998878999763 12222111 01112333 47899999999999
Q ss_pred eCCCCcCCCCCeEEEEecCC
Q 016941 107 SGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 107 CGV~gHCq~GMKLaInV~as 126 (380)
|. .||..||+..|+|...
T Consensus 78 C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 78 CT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CT--TTGGGTCEEEEEESSS
T ss_pred eC--CcccCCCEEEEEEcCC
Confidence 98 4999999999999863
No 17
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.89 E-value=4.6e-09 Score=81.85 Aligned_cols=90 Identities=20% Similarity=0.257 Sum_probs=62.0
Q ss_pred EEEecC-CCCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecc---cCCCCCCCC--CCccccCCCC-cEEE
Q 016941 25 KFNVGG-KHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNK---DDYDSCNTK--KPLLKLDSGD-SEFK 96 (380)
Q Consensus 25 tyvVGG-s~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK---~dYdsCn~s--npI~~fSsGn-dvVt 96 (380)
++.||+ +.++.|.|. ..++++||+|+|++... .|+|..... +.++.+... ..-.....|. .+++
T Consensus 2 ~V~~~~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~ 73 (99)
T 1byp_A 2 EVLLGSSDGGLAFVPS--------DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVT 73 (99)
T ss_dssp EEEESCTTSCCSEESS--------EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEE
T ss_pred EEEEecCCCcceEeCC--------EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEE
Confidence 567775 456877653 56899999999988764 699876532 122222110 0001234444 4788
Q ss_pred eccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 97 LDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 97 LdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++|.|+|+|. .||+.||+..|+|.
T Consensus 74 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 74 LTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp ECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred eCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999999 79999999999983
No 18
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.88 E-value=4.1e-09 Score=81.89 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=61.6
Q ss_pred eEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecccC---CCCCCCCCCccccCCC-CcEEEe
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNKDD---YDSCNTKKPLLKLDSG-DSEFKL 97 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK~d---YdsCn~snpI~~fSsG-ndvVtL 97 (380)
.++.||++ .++.|.|. ..++++||+|+|.+... .|+|....... ++.|.... .....| ..++++
T Consensus 3 ~~V~~~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~tf 72 (97)
T 1b3i_A 3 VQIKMGTDKYAPLYEPK--------ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK--LAIAPGSFYSVTL 72 (97)
T ss_dssp EEEEEEETTTEEEEESS--------EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC--CCCSCSCCEEEEC
T ss_pred EEEEEeccCCccEEeCC--------EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc--eecCCCCEEEEEe
Confidence 35667753 56777653 57899999999998653 69987753221 11111111 122334 357889
Q ss_pred ccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 98 DRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 98 dkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+++|.|+|+|. .||+.||+..|.|.
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 99999999999 89999999999983
No 19
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.81 E-value=3.7e-09 Score=82.28 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=61.0
Q ss_pred eEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-CCceEEEecccC--CCCCCCCCCccccCCCC-cEEEec
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-GSDSVLLVNKDD--YDSCNTKKPLLKLDSGD-SEFKLD 98 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-G~HSVveVnK~d--YdsCn~snpI~~fSsGn-dvVtLd 98 (380)
.++.+|.+ .++.|.|. ..++++||+|+|.+.. ..|+|...+... .+.++..........|. .+++++
T Consensus 3 ~~V~~~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~ 74 (98)
T 1pcs_A 3 ATVKMGSDSGALVFEPS--------TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFT 74 (98)
T ss_dssp EEEEESCTTSCSSEESS--------EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECC
T ss_pred EEEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcC
Confidence 45677754 56887653 5789999999999765 369987643210 00011100011223443 478889
Q ss_pred cccceEEEeCCCCcCCCCCeEEEEec
Q 016941 99 RSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 99 kpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++|.|+|+|. .||+.||+..|.|.
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999983
No 20
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.79 E-value=7.4e-09 Score=87.20 Aligned_cols=80 Identities=16% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCc-cccCCC-CcEEEeccccceEEEeC
Q 016941 31 KHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPL-LKLDSG-DSEFKLDRSGPFYFISG 108 (380)
Q Consensus 31 s~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI-~~fSsG-ndvVtLdkpG~yYFICG 108 (380)
+..+.|.|. ..++++||+|+|.+.+..|+|...+. |...+.. .....| ..+++++++|.|+|+|.
T Consensus 13 ~G~~~F~P~--------~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~ 79 (123)
T 3erx_A 13 SGAMVFEPA--------FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT 79 (123)
T ss_dssp TEEEEEESS--------EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG
T ss_pred CCcEeEeCC--------EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC
Confidence 334777663 67999999999999887899976321 2222210 111223 35899999999999999
Q ss_pred CCCcCCCCCeEEEEecC
Q 016941 109 NHDHCQKGQKLIVVVLH 125 (380)
Q Consensus 109 V~gHCq~GMKLaInV~a 125 (380)
.||..||+-.|+|..
T Consensus 80 --~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 80 --PHFGMGMVGLVQVGD 94 (123)
T ss_dssp --GGTTTTCEEEEEESS
T ss_pred --CCCcCCcEEEEEECC
Confidence 699999999999985
No 21
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.79 E-value=1.3e-08 Score=86.26 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=60.9
Q ss_pred cCCCC--CccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCc-cccCCCC-cEEEeccccceE
Q 016941 29 GGKHG--WVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPL-LKLDSGD-SEFKLDRSGPFY 104 (380)
Q Consensus 29 GGs~G--Wt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI-~~fSsGn-dvVtLdkpG~yY 104 (380)
+|++| +.|.|. ..++++||+|+|.+....|+|...+. |...+.. .....|. .+++++++|.|+
T Consensus 10 ~g~~G~~~~F~P~--------~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~ 76 (124)
T 3ef4_A 10 KDDAGNTMVFQPG--------FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYV 76 (124)
T ss_dssp ECTTSCEEEEESS--------EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEE
T ss_pred cCCCCceeEEeCC--------EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEE
Confidence 44444 888763 67999999999999888899987421 2222211 1122333 589999999999
Q ss_pred EEeCCCCcCCCCCeEEEEecC
Q 016941 105 FISGNHDHCQKGQKLIVVVLH 125 (380)
Q Consensus 105 FICGV~gHCq~GMKLaInV~a 125 (380)
|+|. .||..||+-.|+|..
T Consensus 77 Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 77 LKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp EECT--TTGGGTCEEEEEESS
T ss_pred EEcC--CCCcCCCEEEEEECC
Confidence 9998 599999999999986
No 22
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.79 E-value=1.1e-08 Score=86.61 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=61.5
Q ss_pred ecCCC-CCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCc-cccCCC-CcEEEeccccceE
Q 016941 28 VGGKH-GWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPL-LKLDSG-DSEFKLDRSGPFY 104 (380)
Q Consensus 28 VGGs~-GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI-~~fSsG-ndvVtLdkpG~yY 104 (380)
+|.+. ++.|.|. ..++++||+|+|.+.+..|+|...+. |...... .....| ..+|+++++|.|+
T Consensus 11 ~g~~g~~~~F~P~--------~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~ 77 (127)
T 3tu6_A 11 KAADGRVMAFEPA--------VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYM 77 (127)
T ss_dssp ECTTSCEEEEESS--------EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEE
T ss_pred cCCCCcccEEeCC--------EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEE
Confidence 36554 4777663 67999999999999887899976432 1111110 111223 3589999999999
Q ss_pred EEeCCCCcCCCCCeEEEEecCCC
Q 016941 105 FISGNHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 105 FICGV~gHCq~GMKLaInV~ass 127 (380)
|+|. .||..||+..|.|....
T Consensus 78 y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 78 YQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EECT--TTGGGTCEEEEEESSCT
T ss_pred EEeC--CCCcCCcEEEEEECcCC
Confidence 9999 59999999999998643
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.57 E-value=9.7e-08 Score=80.15 Aligned_cols=77 Identities=8% Similarity=0.020 Sum_probs=51.7
Q ss_pred CCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecccCCCCCCCCCCccccCCCC-cEEEeccccceEEEeCCC
Q 016941 33 GWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNKDDYDSCNTKKPLLKLDSGD-SEFKLDRSGPFYFISGNH 110 (380)
Q Consensus 33 GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK~dYdsCn~snpI~~fSsGn-dvVtLdkpG~yYFICGV~ 110 (380)
+|.|.| ...++++||+|+|.+... .|+|...+..+- .-.+.. ..+..|. .+++++++|.|+|+|..
T Consensus 54 ~~~F~P--------~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g-~~~~~s--~~l~pG~t~~~tF~~~G~y~y~C~~- 121 (132)
T 3c75_A 54 KMKYLT--------PEVTIKAGETVYWVNGEVMPHNVAFKKGIVG-EDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP- 121 (132)
T ss_dssp TTEESS--------SEEEECTTCEEEEEECSSSCBCCEECTTTSS-SSCEEC--CCBCTTEEEEEEECSCEEEEEECSS-
T ss_pred eeEEeC--------CEEEECCCCEEEEEECCCCceEEEEeCCCCC-cccccc--cccCCCCEEEEEcCCCEEEEEEeCC-
Confidence 466655 357899999999997654 599876432210 000111 1223443 47888999999999998
Q ss_pred CcCCCCCeEEEEec
Q 016941 111 DHCQKGQKLIVVVL 124 (380)
Q Consensus 111 gHCq~GMKLaInV~ 124 (380)
|. ||+..|.|.
T Consensus 122 -H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 -HP--FMRGKVIVE 132 (132)
T ss_dssp -CT--TCEEEEEEC
T ss_pred -Cc--CCEEEEEEC
Confidence 76 999999883
No 24
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.37 E-value=9e-07 Score=68.97 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=58.6
Q ss_pred eEEEecCC-CCCccCCCCCcccccCCCeEecCceeeeeeec-CCceEEEecccCCCCCCC-------CCCccccCCCC-c
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGRNRFLVNDTLFFKYKK-GSDSVLLVNKDDYDSCNT-------KKPLLKLDSGD-S 93 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~a-G~HSVveVnK~dYdsCn~-------snpI~~fSsGn-d 93 (380)
.++.||.+ .++.|.+. ..+++.||+|+|.+.. ..|+|..-... ..|.. .........|. .
T Consensus 3 ~~V~~~~~~~~~~f~p~--------~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~ 72 (105)
T 3cvb_A 3 FTVKMGADSGLFQFEPA--------NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESY 72 (105)
T ss_dssp EEEEESCTTCCSCEESS--------EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEE
T ss_pred EEEEEeecCCccEEeCC--------EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeE
Confidence 45678754 56777543 5689999999998754 36888763211 11210 00001123343 3
Q ss_pred EEEe---ccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 94 EFKL---DRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 94 vVtL---dkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++ +++|+|+|.|. .||..||+-.|.|.
T Consensus 73 ~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 73 EITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 6677 78999999999 79999999999985
No 25
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.31 E-value=1.9e-06 Score=76.61 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=60.8
Q ss_pred eEEEecCCCCCccCCCCCcccccCCCeE-ecCceeeeeeecC--------CceEEEecccC---------------CCCC
Q 016941 24 LKFNVGGKHGWVTNPGENYNKWSGRNRF-LVNDTLFFKYKKG--------SDSVLLVNKDD---------------YDSC 79 (380)
Q Consensus 24 ~tyvVGGs~GWt~~P~~nYt~WAS~kTF-~VGDTLVFkY~aG--------~HSVveVnK~d---------------YdsC 79 (380)
+++.|+.++++.|.+. .+++ +.||+|.|.|.+. .|+++..+..+ |..=
T Consensus 43 ~~V~I~~~d~m~F~P~--------~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~ 114 (167)
T 3ay2_A 43 CAATVESNDNMQFNTK--------DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKP 114 (167)
T ss_dssp CEEEEEECTTSCBSCS--------EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCT
T ss_pred eEEEEEeCCCceEecc--------eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccc
Confidence 4677876668888653 4677 7899877777543 29987765432 2211
Q ss_pred CCCCCc---cccCCCCc-EEEec----cccceEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS-EFKLD----RSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd-vVtLd----kpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....|.+ .|+++ ++|.|+|+|...+|-+ |||-.|+|.
T Consensus 115 ~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 115 DDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 111111 12344543 55554 7899999999999988 999999985
No 26
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.26 E-value=5.8e-07 Score=70.91 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=46.2
Q ss_pred CCeEecCceeeeeeecCC---ceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCCCCCeEEE
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQKGQKLIV 121 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~GMKLaI 121 (380)
..++++||++.|.+.+.. |++..- ++.. . .....|. ..|+.+++|.|.|+|. .||..||+-.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~---~~~~---~---~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i 97 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIK---KLGI---D---VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKV 97 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEG---GGTE---E---EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEe---cCCc---c---eeecCCcceeEEEecccCceEEEECc--cccCCCCEEEE
Confidence 579999999999986532 666541 1110 0 1122333 3567789999999997 59999999999
Q ss_pred Eec
Q 016941 122 VVL 124 (380)
Q Consensus 122 nV~ 124 (380)
.|.
T Consensus 98 ~Ve 100 (100)
T 4hci_A 98 IVK 100 (100)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 27
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.22 E-value=2e-06 Score=71.78 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=59.0
Q ss_pred EEEe---cCCCCCccCCCCCcccccCCCeEecCceeeeeeecCCceEEEecccCCCCCCCCCCc-cccCCC-CcEEEecc
Q 016941 25 KFNV---GGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPL-LKLDSG-DSEFKLDR 99 (380)
Q Consensus 25 tyvV---GGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG~HSVveVnK~dYdsCn~snpI-~~fSsG-ndvVtLdk 99 (380)
++.+ |+++++.|.|. ..++++||+|+|.+....|+|+... .|...+.. .....| ...+++++
T Consensus 4 ~V~ml~~g~~g~~~F~P~--------~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~ 70 (122)
T 2ux6_A 4 EVHMLNKGKDGAMVFEPA--------SLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTA 70 (122)
T ss_dssp EEEEEEEETTEEEEEESS--------EEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECS
T ss_pred EEEEEecCCCCCceEeCC--------EEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCC
Confidence 4455 55545777653 5789999999999987789997643 12111110 111223 35789999
Q ss_pred ccceEEEeCCCCcCCCCCeEEEEecCC
Q 016941 100 SGPFYFISGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 100 pG~yYFICGV~gHCq~GMKLaInV~as 126 (380)
+|.|+|+|.. |+. |+..|.|...
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999998 888 9999999753
No 28
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.19 E-value=1e-05 Score=68.61 Aligned_cols=91 Identities=8% Similarity=0.166 Sum_probs=60.1
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeEecC-ceeeeeeecC--------CceEEEeccc----------------CCCCC
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRFLVN-DTLFFKYKKG--------SDSVLLVNKD----------------DYDSC 79 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF~VG-DTLVFkY~aG--------~HSVveVnK~----------------dYdsC 79 (380)
++.|+.++.+.|.+. ..+++.| |.+.|.|.+. .|+++..+.. +|..=
T Consensus 4 ~v~i~~~d~m~F~p~--------~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~ 75 (129)
T 1cuo_A 4 ETTVTSGDTMTYSTR--------SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTP 75 (129)
T ss_dssp EEEEEECSSSCCSCS--------EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCT
T ss_pred EEEEEeCCCceEccC--------eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccc
Confidence 566766667888653 5689999 9877777553 3998776543 23211
Q ss_pred CCCCCc---cccCCCCc---EEEec---cccceEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS---EFKLD---RSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd---vVtLd---kpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....|.+ +|+++ ++|.|+|+|..++|=+ |||-.|.|.
T Consensus 76 ~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 76 GDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 111111 12344543 45544 8999999999999999 899999985
No 29
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.13 E-value=3.2e-06 Score=67.51 Aligned_cols=82 Identities=13% Similarity=0.047 Sum_probs=55.1
Q ss_pred ceEEEecCCCCCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecccC----CCCCCCCCCccccCCCC-cEEE
Q 016941 23 ALKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNKDD----YDSCNTKKPLLKLDSGD-SEFK 96 (380)
Q Consensus 23 A~tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK~d----YdsCn~snpI~~fSsGn-dvVt 96 (380)
+.+|.|.- ++|.|.|. ..++++||+|+|.+... .|+|...+..+ |+.+ .+..|. ..++
T Consensus 18 a~~~~V~~-~~~~F~P~--------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~t 81 (105)
T 2ov0_A 18 DGAIVVDI-AKMKYETP--------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLT 81 (105)
T ss_dssp TTCEEEEE-ETTEESSS--------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEE
T ss_pred CcCEEEEE-eecEEcCC--------EEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEE
Confidence 34444432 35777653 57899999999987654 69987643211 2211 123343 4788
Q ss_pred eccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 97 LDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 97 LdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
++++|.|+|+|.. |. ||+..|.|.
T Consensus 82 f~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 82 FTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp ECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred eCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 8999999999998 54 999999883
No 30
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.06 E-value=5.2e-06 Score=66.69 Aligned_cols=77 Identities=8% Similarity=0.037 Sum_probs=51.6
Q ss_pred CCccCCCCCcccccCCCeEecCceeeeeeecC-CceEEEecccCCCCCCCCCCccccCCCC-cEEEeccccceEEEeCCC
Q 016941 33 GWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG-SDSVLLVNKDDYDSCNTKKPLLKLDSGD-SEFKLDRSGPFYFISGNH 110 (380)
Q Consensus 33 GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG-~HSVveVnK~dYdsCn~snpI~~fSsGn-dvVtLdkpG~yYFICGV~ 110 (380)
+|.|.|. ..++++||+|.|.+... .|+|...+... ..-.+.. ..+..|. ..++++++|.|.|+|..
T Consensus 28 ~~~F~P~--------~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s--~~l~~g~~~~~tf~~~G~y~~~C~~- 95 (106)
T 1id2_A 28 KMKYLTP--------EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP- 95 (106)
T ss_dssp TTEESSS--------EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEEEEEECSS-
T ss_pred ecEEeCC--------EEEECCCCEEEEEECCCCcEEEEEeCCCC-Ccccccc--cccCCCCEEEEEeCCCEEEEEEeCC-
Confidence 3666653 57899999999997654 59987643210 0000011 1223343 47888999999999998
Q ss_pred CcCCCCCeEEEEec
Q 016941 111 DHCQKGQKLIVVVL 124 (380)
Q Consensus 111 gHCq~GMKLaInV~ 124 (380)
|+ ||+..|.|.
T Consensus 96 -H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 -HP--FMRGKVIVE 106 (106)
T ss_dssp -CT--TCEEEEEEC
T ss_pred -CC--CCEEEEEEC
Confidence 77 999999883
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.99 E-value=3.1e-05 Score=65.62 Aligned_cols=91 Identities=13% Similarity=0.219 Sum_probs=57.8
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeE-ecCceeeeeeecC--------CceEEEeccc----------------CCCCC
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRF-LVNDTLFFKYKKG--------SDSVLLVNKD----------------DYDSC 79 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF-~VGDTLVFkY~aG--------~HSVveVnK~----------------dYdsC 79 (380)
++.|+.++++.|.|. ..++ +.||++.|.|.+. .|+++..+.+ +|..=
T Consensus 3 ~v~v~~~d~m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~ 74 (128)
T 2iaa_C 3 DVSIEGNDSMQFNTK--------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKA 74 (128)
T ss_dssp EEEEEECTTSCBSCS--------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCT
T ss_pred EEEEEeCCCceEecC--------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccccc
Confidence 456666667888653 3455 6699877777553 3998775433 23211
Q ss_pred CCCCCc---cccCCCCc-EEE--ec--ccc-ceEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS-EFK--LD--RSG-PFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd-vVt--Ld--kpG-~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....|.+ .|+ +. ++| .|.|+|..++|=+ |||-.|+|.
T Consensus 75 ~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 75 GDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 111111 12345543 444 44 678 5999999999999 999999985
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.97 E-value=2.4e-05 Score=66.34 Aligned_cols=91 Identities=13% Similarity=0.176 Sum_probs=58.2
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeE-ecCceeeeeeecC--------CceEEEecccC----------------CCCC
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRF-LVNDTLFFKYKKG--------SDSVLLVNKDD----------------YDSC 79 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF-~VGDTLVFkY~aG--------~HSVveVnK~d----------------YdsC 79 (380)
++.|+.++++.|.|. ..++ +.||++.|.|.+. .|+++..+.++ |..=
T Consensus 4 ~v~v~~~d~m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~ 75 (128)
T 1nwp_A 4 KVTVDSTDQMSFNTK--------DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKD 75 (128)
T ss_dssp EEEEEECTTSCBSCS--------EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCT
T ss_pred EEEEEeCCCccEecC--------EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccccc
Confidence 566776667888763 4577 7899887777553 29987754332 2111
Q ss_pred CCCCCc---cccCCCCc-EEE--ec--cccc-eEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS-EFK--LD--RSGP-FYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd-vVt--Ld--kpG~-yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....|.+ .|+ +. ++|. |+|+|..++|=+ |||-.|+|.
T Consensus 76 ~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 76 GDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 111111 12345543 444 44 5676 999999999999 999999883
No 33
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.97 E-value=2.9e-05 Score=65.75 Aligned_cols=91 Identities=13% Similarity=0.178 Sum_probs=57.2
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeE-ecCceeeeeeecC--------CceEEEeccc----------------CCCCC
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRF-LVNDTLFFKYKKG--------SDSVLLVNKD----------------DYDSC 79 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF-~VGDTLVFkY~aG--------~HSVveVnK~----------------dYdsC 79 (380)
++.|+.++++.|.+. ..++ +.||++.|.|.+. .|+++..+.. +|..=
T Consensus 4 ~v~v~~~d~m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (129)
T 2ccw_A 4 EATVESNDAMQYNVK--------EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKA 75 (129)
T ss_dssp EEEEEECTTSCBSCS--------EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCT
T ss_pred EEEEEeCCCccEecc--------eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccc
Confidence 566776667888652 3455 6699877777553 2998876543 23221
Q ss_pred CCCCCc---cccCCCCc-E--EEec--cccc-eEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS-E--FKLD--RSGP-FYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd-v--VtLd--kpG~-yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ .....|.+ . |++. ++|. |+|+|..++|=+ |||-.|+|.
T Consensus 76 ~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 76 GDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 111111 12344543 4 4454 5665 999999999988 999999985
No 34
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.56 E-value=2.2e-05 Score=71.07 Aligned_cols=80 Identities=28% Similarity=0.421 Sum_probs=52.7
Q ss_pred eEecCceeeeeeecC---------CceEEEecccCCCCCCCCC-C--ccccCC--CCcEEEec-------------ccc-
Q 016941 50 RFLVNDTLFFKYKKG---------SDSVLLVNKDDYDSCNTKK-P--LLKLDS--GDSEFKLD-------------RSG- 101 (380)
Q Consensus 50 TF~VGDTLVFkY~aG---------~HSVveVnK~dYdsCn~sn-p--I~~fSs--GndvVtLd-------------kpG- 101 (380)
.+++||.|.|-.... .+.|++|++++|+.|+... . +...+. +...|++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 356799998875332 2678999999999998863 2 222232 22233321 255
Q ss_pred ceEEEeCCC-----------CcCCC-CCeEEEEecCCCCC
Q 016941 102 PFYFISGNH-----------DHCQK-GQKLIVVVLHERPP 129 (380)
Q Consensus 102 ~yYFICGV~-----------gHCq~-GMKLaInV~asss~ 129 (380)
.|||||.-. ++|.. +|||.|.|......
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 999999764 68965 99999999765543
No 35
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.29 E-value=0.00029 Score=56.16 Aligned_cols=66 Identities=14% Similarity=0.174 Sum_probs=44.6
Q ss_pred CCeEecCceeeeeeecC---CceEEEecccCCCCCCCCCCccccCCCCc---EEEeccccceEEEeCCCCcCCC-CCeEE
Q 016941 48 RNRFLVNDTLFFKYKKG---SDSVLLVNKDDYDSCNTKKPLLKLDSGDS---EFKLDRSGPFYFISGNHDHCQK-GQKLI 120 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG---~HSVveVnK~dYdsCn~snpI~~fSsGnd---vVtLdkpG~yYFICGV~gHCq~-GMKLa 120 (380)
..+++.||.++|.+.+. .|++...+ +. . ......|.. .|+.+++|.|+|.|.. ||.. +|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~---~~---~---~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDA---FG---V---QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGG---GT---E---EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcC---CC---c---eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 56899999999988653 47765422 11 1 112234432 4555999999999998 7853 49999
Q ss_pred EEec
Q 016941 121 VVVL 124 (380)
Q Consensus 121 InV~ 124 (380)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9885
No 36
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.16 E-value=0.00095 Score=56.76 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=52.5
Q ss_pred eEEEecCCCCCccCCCCCcccccCCCeEecCceeeeeeecC--CceEEEecccCCCCCCCCCCccccCCCC---cEEEec
Q 016941 24 LKFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKG--SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLD 98 (380)
Q Consensus 24 ~tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY~aG--~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLd 98 (380)
.++.|.+. .|.|.| +..++.+||.++|...+. .|++..- ++. .. .....|. ..|+++
T Consensus 46 ~~V~v~~~-~~~f~P--------~~l~Vp~G~~V~~~vts~DV~Hsf~ip---~~~---~k---~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 46 YTVYVLAF-AFGYQP--------NPIEVPQGAEIVFKITSPDVIHGFHVE---GTN---IN---VEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEEEEEE-TTEEES--------SSEEEETTSEEEEEEEBSSSCEEEEET---TSS---CE---EEECBTBCEEEEEECC
T ss_pred EEEEEEEE-eCEEEC--------CEEEEcCCCEEEEEEEeCCccceEEec---CCC---ce---eEeCCCCcEEEEEEcC
Confidence 34555432 365544 367899999999999763 3665431 111 00 1122342 478999
Q ss_pred cccceEEEeCCCCcCC---CCCeEEEEec
Q 016941 99 RSGPFYFISGNHDHCQ---KGQKLIVVVL 124 (380)
Q Consensus 99 kpG~yYFICGV~gHCq---~GMKLaInV~ 124 (380)
++|.|+|+|.. +|. .+|++.|.|.
T Consensus 108 ~~G~y~~~C~e--~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 108 RPGEYRIICNQ--YCGLGHQNMFGTIVVK 134 (135)
T ss_dssp SCEEEEEECCS--CCSTTSTTCEEEEEEE
T ss_pred CCEEEEEECcc--cCCCCcCCCEEEEEEE
Confidence 99999999987 554 6899999986
No 37
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.10 E-value=0.0012 Score=59.81 Aligned_cols=77 Identities=25% Similarity=0.358 Sum_probs=49.3
Q ss_pred CeEecCceeeeeeec----------CCceEEEecccCCCCCCCCCCc-c--ccC-----CCCcEEEe-------------
Q 016941 49 NRFLVNDTLFFKYKK----------GSDSVLLVNKDDYDSCNTKKPL-L--KLD-----SGDSEFKL------------- 97 (380)
Q Consensus 49 kTF~VGDTLVFkY~a----------G~HSVveVnK~dYdsCn~snpI-~--~fS-----sGndvVtL------------- 97 (380)
..+++||.|.+-... ....|++|++++|+.|+..... . .-+ .|...|++
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 468999999876432 1344788999999999875432 1 111 13333321
Q ss_pred cccc-ceEEEeCCC-----CcCCCCCeEEEEecCCCC
Q 016941 98 DRSG-PFYFISGNH-----DHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 98 dkpG-~yYFICGV~-----gHCq~GMKLaInV~asss 128 (380)
=++| .||||+.-. +-| |||.|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 1256 788997432 346 999999987764
No 38
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.58 E-value=0.014 Score=50.00 Aligned_cols=88 Identities=13% Similarity=0.197 Sum_probs=52.6
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeEec-CceeeeeeecCC--------ceEEEeccc----------------CCCCC
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRFLV-NDTLFFKYKKGS--------DSVLLVNKD----------------DYDSC 79 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF~V-GDTLVFkY~aG~--------HSVveVnK~----------------dYdsC 79 (380)
++.|..+++..|.+. .+++.. |+++.|.+.+.. |+++..+.+ +|-.=
T Consensus 4 ~v~i~~~d~M~F~p~--------~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~ 75 (125)
T 3fsa_A 4 SVDIQGNDQMQFNTN--------AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKP 75 (125)
T ss_dssp EEEEEBCTTSCBSCS--------EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCT
T ss_pred EEEEEccCCcEEecC--------EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCC
Confidence 455666667888652 445544 999988886533 998776322 33221
Q ss_pred CCCCCc---cccCCCCc-EEEec-----cccceEEEeCCCCcCCCCCeEEEEec
Q 016941 80 NTKKPL---LKLDSGDS-EFKLD-----RSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 80 n~snpI---~~fSsGnd-vVtLd-----kpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
+..+.+ ..+..|.. +++++ ++|.|-|+|. +|= |||-.|.|.
T Consensus 76 ~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 76 DDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 111111 12345553 44443 6699999999 787 999999873
No 39
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.51 E-value=0.002 Score=56.30 Aligned_cols=76 Identities=29% Similarity=0.427 Sum_probs=49.4
Q ss_pred eEecCceeeeeeecC---------CceEEEecccCCCCCCCCC-Cc--cccC--CCCcEEEec-------------ccc-
Q 016941 50 RFLVNDTLFFKYKKG---------SDSVLLVNKDDYDSCNTKK-PL--LKLD--SGDSEFKLD-------------RSG- 101 (380)
Q Consensus 50 TF~VGDTLVFkY~aG---------~HSVveVnK~dYdsCn~sn-pI--~~fS--sGndvVtLd-------------kpG- 101 (380)
.+++||.|.|-.... ...|++|++++|+.|+... .. ..-+ .+...|++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 356799998875432 2457889999999998863 21 1111 222233221 355
Q ss_pred ceEEEeCCC-----------CcCCC-CCeEEEEecC
Q 016941 102 PFYFISGNH-----------DHCQK-GQKLIVVVLH 125 (380)
Q Consensus 102 ~yYFICGV~-----------gHCq~-GMKLaInV~a 125 (380)
.||||+.-. |-|.. .|||.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 888888644 47864 8999999964
No 40
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.18 E-value=0.015 Score=52.93 Aligned_cols=98 Identities=20% Similarity=0.361 Sum_probs=55.2
Q ss_pred cccceEEEecCCCCCccCCCCCcccccC--CCeEecCceeeeeeecC-----------CceEEEecccCCCCCCCCC-Cc
Q 016941 20 SSHALKFNVGGKHGWVTNPGENYNKWSG--RNRFLVNDTLFFKYKKG-----------SDSVLLVNKDDYDSCNTKK-PL 85 (380)
Q Consensus 20 ~AsA~tyvVGGs~GWt~~P~~nYt~WAS--~kTF~VGDTLVFkY~aG-----------~HSVveVnK~dYdsCn~sn-pI 85 (380)
.+++..+.|= |.. .|--.+.. ...+++||.|.+-.... ...|++|++++|+.|+... ..
T Consensus 26 ~~sa~rh~Vy----WNS---sNp~F~~~~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~ 98 (182)
T 3czu_B 26 MDAADRHTVF----WNS---SNPKFRNEDYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQ 98 (182)
T ss_dssp ---CCEEEEE----CST---TCGGGTTSCCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGG
T ss_pred hhhccccceE----EcC---CCccccCCCceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCc
Confidence 3445556665 853 12222222 34689999998864321 2457889999999998764 21
Q ss_pred ccc------C-CCCcEEE--------------ecccc-ceEEEeC----CCCcCCCCCeEEEEecCCCC
Q 016941 86 LKL------D-SGDSEFK--------------LDRSG-PFYFISG----NHDHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 86 ~~f------S-sGndvVt--------------LdkpG-~yYFICG----V~gHCq~GMKLaInV~asss 128 (380)
..+ . .|...|+ + ++| .||||+. .++.| |||.|.|.....
T Consensus 99 ~~~~C~~P~~~~~p~kftikFQ~FSP~p~GlEF-~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 99 VRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKEF-KEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp EEEEECCTTCTTSCCEEEEECCSCCSCTTSCCC-CTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred EEEEeCCCCCCCCCcEEEEEEEEcCCCCCCeeE-eCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 111 1 1222222 2 355 7888884 33566 999999985543
No 41
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=95.36 E-value=0.015 Score=56.09 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=52.4
Q ss_pred CCCeEecCceeeeeeecC---CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCCCCCeEE
Q 016941 47 GRNRFLVNDTLFFKYKKG---SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQKGQKLI 120 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~aG---~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~GMKLa 120 (380)
...+++.||+|+|++.+. .|++..-.......|.. ..|. ..|+++++|+|||.|...+|-..||+..
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i-------~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~ 127 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVN-------GKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGN 127 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBC-------STTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceec-------CCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEE
Confidence 457899999999998653 27665422222223432 2232 3577788999999999989988899999
Q ss_pred EEecCCC
Q 016941 121 VVVLHER 127 (380)
Q Consensus 121 InV~ass 127 (380)
|.|....
T Consensus 128 i~V~~~~ 134 (447)
T 2dv6_A 128 IQVLPGN 134 (447)
T ss_dssp EEEESSC
T ss_pred EEEeCCc
Confidence 9997654
No 42
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.16 E-value=0.019 Score=50.22 Aligned_cols=74 Identities=26% Similarity=0.368 Sum_probs=48.2
Q ss_pred eEecCceeeeeeecC------------CceEEEecccCCCCCCCCC-Ccccc--C--CCCcEEE--------------ec
Q 016941 50 RFLVNDTLFFKYKKG------------SDSVLLVNKDDYDSCNTKK-PLLKL--D--SGDSEFK--------------LD 98 (380)
Q Consensus 50 TF~VGDTLVFkY~aG------------~HSVveVnK~dYdsCn~sn-pI~~f--S--sGndvVt--------------Ld 98 (380)
.+++||.|.+-.... ...|++|++++|+.|+... ....+ + .+...|+ +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF- 101 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF- 101 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC-
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee-
Confidence 578899998875332 2447889999999998862 22111 1 1222221 2
Q ss_pred ccc-ceEEEeCCC-----------CcCCC-CCeEEEEec
Q 016941 99 RSG-PFYFISGNH-----------DHCQK-GQKLIVVVL 124 (380)
Q Consensus 99 kpG-~yYFICGV~-----------gHCq~-GMKLaInV~ 124 (380)
++| .||||+.-. |-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 255 889998543 47864 899999985
No 43
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.04 E-value=0.053 Score=48.18 Aligned_cols=67 Identities=13% Similarity=0.214 Sum_probs=42.8
Q ss_pred CCCeEecCceeeeeeecC--CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCCC---CCe
Q 016941 47 GRNRFLVNDTLFFKYKKG--SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQK---GQK 118 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~aG--~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~---GMK 118 (380)
+...+.+|+.++|...+. .|+...- ++.. . .....|. ..|+.+++|.|||+|.. .|.. +|+
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP---~lgi-----k-~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M~ 161 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVE---GTNI-----N-VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 161 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEET---TSSC-----E-EEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGCE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEEC---CCCe-----E-EEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCCE
Confidence 456788888888887653 2444331 1110 0 0112333 46889999999999996 5654 699
Q ss_pred EEEEec
Q 016941 119 LIVVVL 124 (380)
Q Consensus 119 LaInV~ 124 (380)
..|.|.
T Consensus 162 g~V~V~ 167 (168)
T 3s8f_B 162 GTIVVK 167 (168)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999986
No 44
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=94.88 E-value=0.047 Score=47.67 Aligned_cols=76 Identities=25% Similarity=0.346 Sum_probs=48.0
Q ss_pred CeEecCceeeeeeecC----------CceEEEecccCCCCCCCCCCc-c--ccC-----CCCcEEEe-------------
Q 016941 49 NRFLVNDTLFFKYKKG----------SDSVLLVNKDDYDSCNTKKPL-L--KLD-----SGDSEFKL------------- 97 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG----------~HSVveVnK~dYdsCn~snpI-~--~fS-----sGndvVtL------------- 97 (380)
..+++||.|.+-.... ...|++|++++|+.|+..... . .-+ .+...|++
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 4688999998764321 344788999999999875431 1 111 13333321
Q ss_pred cccc-ceEEEeCCC-----CcCCCCCeEEEEecCCC
Q 016941 98 DRSG-PFYFISGNH-----DHCQKGQKLIVVVLHER 127 (380)
Q Consensus 98 dkpG-~yYFICGV~-----gHCq~GMKLaInV~ass 127 (380)
=++| .||||+.-. +-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 1256 788897432 346 99999997654
No 45
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.81 E-value=0.075 Score=56.09 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=46.9
Q ss_pred CCCeEecCceeeeeeecC------CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCCCC-
Q 016941 47 GRNRFLVNDTLFFKYKKG------SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQKG- 116 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~aG------~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~G- 116 (380)
...++.+||.|+|...+. .|++.... +. .......|. ..|+.+++|.|||+|.. +|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs---lG------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~H 626 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN---HG------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALH 626 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT---TT------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC---CC------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCc
Confidence 367899999999998763 46664421 11 001122343 36888999999999998 77654
Q ss_pred --CeEEEEecC
Q 016941 117 --QKLIVVVLH 125 (380)
Q Consensus 117 --MKLaInV~a 125 (380)
|+..|.|..
T Consensus 627 s~M~G~ViVEP 637 (638)
T 3sbq_A 627 MEMVGRMMVEP 637 (638)
T ss_dssp TTCEEEEEEEC
T ss_pred ccceEEEEEec
Confidence 999999864
No 46
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.37 E-value=0.1 Score=54.46 Aligned_cols=68 Identities=9% Similarity=0.038 Sum_probs=46.0
Q ss_pred CCeEecCceeeeeeecC------CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCC---CCcCCC
Q 016941 48 RNRFLVNDTLFFKYKKG------SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGN---HDHCQK 115 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG------~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV---~gHCq~ 115 (380)
..++.+||+|+|.+.+. .|++..-+ ... .+ ....|. ..|+++++|.|||.|.. ..| .
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv-~~-------~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~ 582 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGV-AM-------EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--M 582 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTE-EE-------EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--T
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCc-ce-------eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--c
Confidence 56889999999998762 46665421 110 01 122343 36889999999999984 234 4
Q ss_pred CCeEEEEecCC
Q 016941 116 GQKLIVVVLHE 126 (380)
Q Consensus 116 GMKLaInV~as 126 (380)
||+..|.|...
T Consensus 583 gM~G~IiV~p~ 593 (595)
T 1fwx_A 583 EMRGRMLVEPK 593 (595)
T ss_dssp TCEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999754
No 47
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=93.04 E-value=0.082 Score=47.11 Aligned_cols=76 Identities=25% Similarity=0.408 Sum_probs=46.1
Q ss_pred CeEecCceeeeeeecC-----------CceEEEecccCCCCCCCCCCc-ccc--C-----CCCcEE--E-----------
Q 016941 49 NRFLVNDTLFFKYKKG-----------SDSVLLVNKDDYDSCNTKKPL-LKL--D-----SGDSEF--K----------- 96 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----------~HSVveVnK~dYdsCn~snpI-~~f--S-----sGndvV--t----------- 96 (380)
..+++||.|.+-.... ...|++|++++|+.|+....- ..+ + .|...| +
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 4688999998875332 123788999999999886521 111 1 122222 2
Q ss_pred -ecccc-ceEEEeCCC-----CcCCCCCeEEEEecCCCC
Q 016941 97 -LDRSG-PFYFISGNH-----DHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 97 -LdkpG-~yYFICGV~-----gHCq~GMKLaInV~asss 128 (380)
+ ++| .||||+.-. +-| |||.|.|.....
T Consensus 112 EF-~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~~ 146 (157)
T 2wo3_B 112 EF-RPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQE 146 (157)
T ss_dssp CC-CTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC-
T ss_pred ee-eCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCCC
Confidence 2 255 789998543 356 577777765543
No 48
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=87.83 E-value=0.39 Score=44.29 Aligned_cols=77 Identities=10% Similarity=0.077 Sum_probs=47.7
Q ss_pred CCeEecCceeeeeeecCC-----ceEEE------ecccCCCCC--CCCCCccccCCCC---cEEEeccccceEEEeCCCC
Q 016941 48 RNRFLVNDTLFFKYKKGS-----DSVLL------VNKDDYDSC--NTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHD 111 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~-----HSVve------VnK~dYdsC--n~snpI~~fSsGn---dvVtLdkpG~yYFICGV~g 111 (380)
..+++.||+++|.+.+.. |.+.. |-+++...- ...+-+ ....|. ..|..+++|.|.|.|-+..
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv-~v~pg~~~~v~~~~~~pG~~~~hCH~~~ 274 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTI-SQVQGQRGILELRFPYPGKFMFHAHKTE 274 (288)
T ss_dssp CEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEE-EEETTCEEEEEECCCSCEEEEEECSSHH
T ss_pred ccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEE-EeCCCceEEEEEECCCCEEEEEEecChH
Confidence 457899999998886532 44422 211111000 000111 112233 2566788999999999999
Q ss_pred cCCCCCeEEEEecC
Q 016941 112 HCQKGQKLIVVVLH 125 (380)
Q Consensus 112 HCq~GMKLaInV~a 125 (380)
|=++||.-.|+|.+
T Consensus 275 H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 275 FAELGWMGFFEVSA 288 (288)
T ss_dssp HHTTTCEEEEEEEC
T ss_pred HHhcCCCEEEEEeC
Confidence 99999999999864
No 49
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=87.33 E-value=0.71 Score=40.09 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=26.1
Q ss_pred CeEecCceeeeeeecC-----------CceEEEecccCCCCCCCCC
Q 016941 49 NRFLVNDTLFFKYKKG-----------SDSVLLVNKDDYDSCNTKK 83 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----------~HSVveVnK~dYdsCn~sn 83 (380)
..+++||.|.+-.... ...++.|++++|+.|+...
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 4578999997765332 2346789999999999765
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=86.77 E-value=0.72 Score=43.04 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=48.2
Q ss_pred CeEecCceeeeeeecC-----CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCC-----cCCC
Q 016941 49 NRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHD-----HCQK 115 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~g-----HCq~ 115 (380)
++++.||+|++++.+. -|.+..-...+.+... .+.....|. ..|+++++|+|||-|-..+ |-..
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~---~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~ 142 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---GLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVS 142 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGG---GGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHT
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCCC---ceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhC
Confidence 5789999999998774 2665442211111100 111123443 3678889999999998864 6778
Q ss_pred CCeEEEEecCC
Q 016941 116 GQKLIVVVLHE 126 (380)
Q Consensus 116 GMKLaInV~as 126 (380)
||.-.|.|...
T Consensus 143 Gl~G~~iV~~~ 153 (333)
T 1mzy_A 143 GMAGCIMVLPR 153 (333)
T ss_dssp TCEEEEEEECT
T ss_pred CCEEEEEEccC
Confidence 99888888643
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=85.25 E-value=0.83 Score=42.56 Aligned_cols=75 Identities=20% Similarity=0.241 Sum_probs=47.4
Q ss_pred CeEecCceeeeeeecC-----CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCC----cCCCC
Q 016941 49 NRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHD----HCQKG 116 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~g----HCq~G 116 (380)
++++.||+|++++.+. .|.+..-.....+ + ...+.....|. ..|+++++|+|||-|...+ |-..|
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~--~-~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~G 143 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL--G-GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSG 143 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCCC--C-CcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCC
Confidence 4789999999988774 3665442111000 0 01111123443 3677889999999999864 55689
Q ss_pred CeEEEEecCC
Q 016941 117 QKLIVVVLHE 126 (380)
Q Consensus 117 MKLaInV~as 126 (380)
|.-.|.|...
T Consensus 144 l~G~liV~~~ 153 (336)
T 1oe1_A 144 MSGTLMVLPR 153 (336)
T ss_dssp CEEEEEEECT
T ss_pred CeEEEEEecC
Confidence 9988888753
No 52
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=83.93 E-value=2.6 Score=40.56 Aligned_cols=31 Identities=16% Similarity=0.348 Sum_probs=25.8
Q ss_pred EEEeccccceEEEeCCCCcCCC---CCeEEEEecCC
Q 016941 94 EFKLDRSGPFYFISGNHDHCQK---GQKLIVVVLHE 126 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~---GMKLaInV~as 126 (380)
.|+.+++|.||..|.. .|.. .|++.|.|...
T Consensus 232 ~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 232 WFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp EEECSSSEEEEECCCS--CCSTTTTSCCEEEEEECH
T ss_pred EEEeCCCEEEEEEccc--ccCcCccCCeeEEEEEcH
Confidence 6789999999999986 6765 49999998754
No 53
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=82.41 E-value=1.2 Score=41.89 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=46.5
Q ss_pred CCeEecCceeeeeeecC-----CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCC---CcCCCC
Q 016941 48 RNRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNH---DHCQKG 116 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~---gHCq~G 116 (380)
.++++.||+|++++.+. .|++..=--...|. . .. ......|. ..|+++++|+|||-|... .|-..|
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG-~-~~-~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~G 147 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG-G-AA-ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANG 147 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG-G-TT-TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC-C-Cc-ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcc
Confidence 45899999999988765 35553310000110 0 00 01123343 267778999999999763 355789
Q ss_pred CeEEEEecCC
Q 016941 117 QKLIVVVLHE 126 (380)
Q Consensus 117 MKLaInV~as 126 (380)
|.-.|.|...
T Consensus 148 l~G~~iV~~~ 157 (327)
T 1kbv_A 148 MYGLILVEPK 157 (327)
T ss_dssp CEEEEEEECT
T ss_pred eEEEEEEecC
Confidence 9988888754
No 54
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=82.28 E-value=0.8 Score=44.21 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCeEecCceeeeeeecC-----CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCC---CCcCCCC
Q 016941 48 RNRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGN---HDHCQKG 116 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV---~gHCq~G 116 (380)
.++++.||+|++++.+. .|++..=--...|.= .. ......|. ..|+++++|+|||-|-. ..|=..|
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG~--~~-~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 137 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGGG--AE-SSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANG 137 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGG--GG-GCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCCC--Cc-cEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCc
Confidence 45789999999988775 355543100001100 00 01123343 26778899999999943 3577789
Q ss_pred CeEEEEecCCC
Q 016941 117 QKLIVVVLHER 127 (380)
Q Consensus 117 MKLaInV~ass 127 (380)
|...|.|....
T Consensus 138 l~G~~iv~~~~ 148 (442)
T 2zoo_A 138 MYGLILVEPKE 148 (442)
T ss_dssp CEEEEEEECTT
T ss_pred cEEEEEEeCCC
Confidence 98888887543
No 55
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=78.67 E-value=3.6 Score=38.29 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=29.5
Q ss_pred EEEeccccceEEEeCCCCcC-CCCCeEEEEecCC
Q 016941 94 EFKLDRSGPFYFISGNHDHC-QKGQKLIVVVLHE 126 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHC-q~GMKLaInV~as 126 (380)
.|+.+++|.|+|.|-...|+ +.||.-.|+|...
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 57788899999999999999 9999999999753
No 56
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=78.67 E-value=2.1 Score=39.93 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=47.2
Q ss_pred CeEecCceeeeeeecC-----CceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCCC----cCCCC
Q 016941 49 NRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHD----HCQKG 116 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~g----HCq~G 116 (380)
++++.||+|++++.+. .|.+..-.....+ + ...+.....|. ..|+++++|+|||-|...+ |-..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 4789999999999774 2555432111100 0 01111123443 3678889999999999864 56789
Q ss_pred CeEEEEecCC
Q 016941 117 QKLIVVVLHE 126 (380)
Q Consensus 117 MKLaInV~as 126 (380)
|.-.|.|...
T Consensus 150 l~G~~iV~~~ 159 (340)
T 2bw4_A 150 MNGAIMVLPR 159 (340)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEccC
Confidence 9888888653
No 57
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=78.54 E-value=4.6 Score=39.06 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=41.3
Q ss_pred CCCeEecCceeeeeeecCC--ceEEEecccCCCCCCCCCCccc-cCCCC---cEEEeccccceEEEeCCCCcCCC---CC
Q 016941 47 GRNRFLVNDTLFFKYKKGS--DSVLLVNKDDYDSCNTKKPLLK-LDSGD---SEFKLDRSGPFYFISGNHDHCQK---GQ 117 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~aG~--HSVveVnK~dYdsCn~snpI~~-fSsGn---dvVtLdkpG~yYFICGV~gHCq~---GM 117 (380)
+...+-+|+.++|.-.... |+...- ++. ++. .-.|. ..|+.+++|.||..|.. .|.. .|
T Consensus 151 n~l~lP~g~~V~~~lTS~DViHsf~IP---~lg-------~k~DaiPGr~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M 218 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNSVMNSFFIP---RLG-------SQIYAMAGMQTRLHLIANEPGTYDGISAS--YSGPGFSGM 218 (315)
T ss_dssp SBCCCCSSSEEEEEECBSSSCEEEEEG---GGT-------EEEEECBTSCEEEEEECCSCBCCEEBCCS--CCSTTTTTC
T ss_pred ceEEEeCCCEEEEEEEeCCccceeeec---ccC-------cEEeecCCcceeeEEecCCCeEEEEeccc--cchhhHHhc
Confidence 3456778888888886531 333221 111 100 01222 36789999999999986 7865 49
Q ss_pred eEEEEec
Q 016941 118 KLIVVVL 124 (380)
Q Consensus 118 KLaInV~ 124 (380)
++.|.|.
T Consensus 219 ~~~v~vv 225 (315)
T 1fft_B 219 KFKAIAT 225 (315)
T ss_dssp CEECCBC
T ss_pred cceEEEe
Confidence 9988887
No 58
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=71.95 E-value=7 Score=35.71 Aligned_cols=81 Identities=10% Similarity=0.046 Sum_probs=48.8
Q ss_pred CCeEecCceeeeeeecC---CceEE------Eeccc-CCCCCCCCCC-c--cccCCCC---cEEEec---cccceEEEeC
Q 016941 48 RNRFLVNDTLFFKYKKG---SDSVL------LVNKD-DYDSCNTKKP-L--LKLDSGD---SEFKLD---RSGPFYFISG 108 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG---~HSVv------eVnK~-dYdsCn~snp-I--~~fSsGn---dvVtLd---kpG~yYFICG 108 (380)
..+++.||+++|.+.+. .|.+. +|..+ .++.-..... . .....|. ..|..+ .+|.++|-|-
T Consensus 169 ~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH 248 (276)
T 3kw8_A 169 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCH 248 (276)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEEC
T ss_pred CEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECC
Confidence 45889999998888652 35542 22111 1111100000 0 0112232 245555 5899999999
Q ss_pred CCCcCCCCCeEEEEecCCCC
Q 016941 109 NHDHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 109 V~gHCq~GMKLaInV~asss 128 (380)
+..|=..||...+.|.....
T Consensus 249 ~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 249 VQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp SHHHHHTTCEEEEEEECTTS
T ss_pred CchHhhCCCeEEEEEeCCCC
Confidence 99999999999999987654
No 59
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.57 E-value=5.5 Score=36.68 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=41.0
Q ss_pred CCeEecCceeeeeeecCC--ceEEEecccCCCCCCCCCCccc-cCCCC---cEEEeccccceEEEeCCCCcCCC---CCe
Q 016941 48 RNRFLVNDTLFFKYKKGS--DSVLLVNKDDYDSCNTKKPLLK-LDSGD---SEFKLDRSGPFYFISGNHDHCQK---GQK 118 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~--HSVveVnK~dYdsCn~snpI~~-fSsGn---dvVtLdkpG~yYFICGV~gHCq~---GMK 118 (380)
...+-+|+.|+|...... |+.... .+. ++. .-.|. ..|..+++|.||..|.. .|.. .|+
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP---~lg-------vK~daiPGr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~ 109 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIP---RLG-------SQIYAMAGMQTRLHLIANEPGTYDGICAE--ICGPGHSGMK 109 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEG---GGT-------EEEEECTTCCEEEEECCSSSEEEEEEECS--CCSTTSTTCC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEec---ccC-------cEEEecCCceEEEEEEeCCCeEEEEEccc--ccccchhhce
Confidence 346778888888887531 433321 111 110 11222 35778999999999986 7765 499
Q ss_pred EEEEec
Q 016941 119 LIVVVL 124 (380)
Q Consensus 119 LaInV~ 124 (380)
+.|.|.
T Consensus 110 ~~v~vv 115 (205)
T 1cyx_A 110 FKAIAT 115 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999887
No 60
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=70.44 E-value=12 Score=37.48 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=27.9
Q ss_pred EEEe-ccccceEEEeCCCCcCCCCCeEEEEecCCC
Q 016941 94 EFKL-DRSGPFYFISGNHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtL-dkpG~yYFICGV~gHCq~GMKLaInV~ass 127 (380)
+|++ ++.|+|||=|-...|-..||--.|.|....
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 6774 568999999999888888999888887543
No 61
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=69.77 E-value=4.3 Score=38.04 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=28.8
Q ss_pred EEEeccccceEEEeCCCCcC-CCCCeEEEEecCCC
Q 016941 94 EFKLDRSGPFYFISGNHDHC-QKGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHC-q~GMKLaInV~ass 127 (380)
.|+.+++|.|||.|....|| ..||...|.|....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 57778899999999999998 88998888887543
No 62
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=68.56 E-value=10 Score=36.56 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=29.5
Q ss_pred EEEeccccceEEEeCCCCcC-CCCCeEEEEecCCCC
Q 016941 94 EFKLDRSGPFYFISGNHDHC-QKGQKLIVVVLHERP 128 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHC-q~GMKLaInV~asss 128 (380)
.|+++++|.|+|.|....|| ..||...|.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 57888899999999998898 789988888876553
No 63
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=68.39 E-value=7.7 Score=35.65 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=47.0
Q ss_pred CCeEecCceeeeeeecCC---ceEEE--ecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCC---CcCCCC
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSVLL--VNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNH---DHCQKG 116 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSVve--VnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~---gHCq~G 116 (380)
..+++.||+|++++.+.. |++.. +.....|.-.... ......|. ..|+++.+|+|||-|-.. .|=..|
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~-~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 145 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIG-AGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKG 145 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTST-TCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCcc-ceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCc
Confidence 357899999999987642 44332 1111111000000 01112333 367888999999999886 366789
Q ss_pred CeEEEEecCCC
Q 016941 117 QKLIVVVLHER 127 (380)
Q Consensus 117 MKLaInV~ass 127 (380)
|.-.|.|....
T Consensus 146 l~G~liV~~~~ 156 (288)
T 3gdc_A 146 LYGGFIVEPKE 156 (288)
T ss_dssp CEEEEEEECSS
T ss_pred CeEEEEEeCCc
Confidence 98888886554
No 64
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=67.40 E-value=7.7 Score=36.84 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=48.5
Q ss_pred CCeEecCceeeeeeec---CCceEE------EecccC-CCCCCCCCC-c----cccCCCCc---EEEe---ccccceEEE
Q 016941 48 RNRFLVNDTLFFKYKK---GSDSVL------LVNKDD-YDSCNTKKP-L----LKLDSGDS---EFKL---DRSGPFYFI 106 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~a---G~HSVv------eVnK~d-YdsCn~snp-I----~~fSsGnd---vVtL---dkpG~yYFI 106 (380)
..+++.||+++|.+.+ ..|.+. +|..+. |+. ..+. . .....|.. .|+. +.+|.|+|-
T Consensus 210 ~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~~--p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTG--PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCS--TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cEEeCCCCEEEEEEEcCCccccccEecCcEEEEeccCcccC--CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 4579999999998855 235542 222111 110 0000 0 01122332 3453 579999999
Q ss_pred eCCCCcCCCCCeEEEEecCCCC
Q 016941 107 SGNHDHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 107 CGV~gHCq~GMKLaInV~asss 128 (380)
|-+..|=+.||...+.|.....
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCHHHHhccCcEEEEEecCCC
Confidence 9999999999999999986553
No 65
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=65.75 E-value=9.3 Score=35.81 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=41.0
Q ss_pred CeEecCceeeeeeecCC--ceEEEecccCCCCCCCCCCccc-cCCCC---cEEEeccccceEEEeCCCCcCCCC---CeE
Q 016941 49 NRFLVNDTLFFKYKKGS--DSVLLVNKDDYDSCNTKKPLLK-LDSGD---SEFKLDRSGPFYFISGNHDHCQKG---QKL 119 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~--HSVveVnK~dYdsCn~snpI~~-fSsGn---dvVtLdkpG~yYFICGV~gHCq~G---MKL 119 (380)
..+.+|+.++|...... |+...- ++. ++. .-.|. ..++.+++|.||..|.. .|..| |++
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~ip---~l~-------~k~da~PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~ 240 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTVP---AFG-------VKQDAVPGRLAQLWFRAEREGIFFGQCSE--LCGISHAYMPI 240 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEEG---GGT-------EEEEECBTCCEEEEEECCSCEEEEECCCS--CCSTTGGGCCE
T ss_pred EEEecCCEEEEEEEECcccceeeec---ccC-------ceEEecCCceeEEEEecCCcEEEEEEChH--hcccCcccCeE
Confidence 45778888888886531 333221 110 110 11222 36889999999999987 78765 999
Q ss_pred EEEecC
Q 016941 120 IVVVLH 125 (380)
Q Consensus 120 aInV~a 125 (380)
.|.|..
T Consensus 241 ~v~vv~ 246 (262)
T 2gsm_B 241 TVKVVS 246 (262)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888865
No 66
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=64.51 E-value=4.2 Score=32.79 Aligned_cols=16 Identities=38% Similarity=0.748 Sum_probs=12.5
Q ss_pred CeEecCceeeee-eecC
Q 016941 49 NRFLVNDTLFFK-YKKG 64 (380)
Q Consensus 49 kTF~VGDTLVFk-Y~aG 64 (380)
+.|++||.|+|. |..+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 459999999995 6544
No 67
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=63.88 E-value=8.6 Score=36.06 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=28.1
Q ss_pred EEEeccccceEEEeCCCCcCC------CCCeEEEEecCCC
Q 016941 94 EFKLDRSGPFYFISGNHDHCQ------KGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq------~GMKLaInV~ass 127 (380)
.|..+++|.+.|-|-+..|.. .||...|.|....
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 577888999999999999998 5677778877654
No 68
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=62.97 E-value=8.3 Score=39.35 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=46.9
Q ss_pred CCeEecCceeeeeeecC-----CceEEEecccCCCCCC----CCCCccccCCCC---cEEEeccccceEEEeCCCCcCCC
Q 016941 48 RNRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCN----TKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQK 115 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn----~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~ 115 (380)
..+++.||+++|.+.+. .|.+.. ....|..-. ..+.+ ....|. ..|..+++|.++|.|-+..|...
T Consensus 240 ~l~v~~G~~vrlrliN~~~~~~~h~~hl-hG~~f~vi~~d~~~~d~v-~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~ 317 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGGSRDIHVVHF-HGQTLLENGTQQHQLGVW-PLLPGSFKTLEMKASKPGWWLLDTEVGEIQRA 317 (647)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEE-TTCCEEECSSSCEEESSE-EECTTEEEEEEEECCSSEEEEEECCCHHHHTT
T ss_pred CeEEcCCCEEEEEEEeCCCCCcceeEEE-cCcEEEEecCCCcccceE-EECCCeEEEEEEEeccceEeecccCccccccc
Confidence 35678899998888542 243322 111111100 00111 122333 25677889999999999999999
Q ss_pred CCeEEEEecC
Q 016941 116 GQKLIVVVLH 125 (380)
Q Consensus 116 GMKLaInV~a 125 (380)
||...+.|..
T Consensus 318 Gm~~~~~V~~ 327 (647)
T 1sdd_B 318 GMQTPFLIVD 327 (647)
T ss_dssp TCEEEEEEEC
T ss_pred ccccceeeec
Confidence 9999999964
No 69
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=60.77 E-value=8 Score=37.12 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=42.0
Q ss_pred CCeEecCceeeeeeecCC-----ceEEEecccCCCCCCCCCCccccCCCC---cEEEeccccceEEEeCCC---CcCCCC
Q 016941 48 RNRFLVNDTLFFKYKKGS-----DSVLLVNKDDYDSCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNH---DHCQKG 116 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~-----HSVveVnK~dYdsCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~---gHCq~G 116 (380)
..+++.||+++|++.+.. |++..=.....|.. .. ......|. ..|+++++|.|||-|... .|-..|
T Consensus 196 ~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~~DG~--~~-~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~G 272 (447)
T 2dv6_A 196 FLRVRVGDTVELHLKNHKDSLMVHSVDFHGATGPGGA--AA-FTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNG 272 (447)
T ss_dssp CEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGG--GG-GCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTT
T ss_pred eEEecCCCEEEEEEEeCCCCceeEEEeeccccCCCCC--Cc-cEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCC
Confidence 346778999888886642 33321000000000 00 01123443 256778899999999763 233579
Q ss_pred CeEEEEecC
Q 016941 117 QKLIVVVLH 125 (380)
Q Consensus 117 MKLaInV~a 125 (380)
|.-.|.|..
T Consensus 273 l~g~l~v~~ 281 (447)
T 2dv6_A 273 MYGLLLVEP 281 (447)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEeC
Confidence 988888864
No 70
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=58.10 E-value=5.3 Score=37.10 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=29.8
Q ss_pred EEEeccccceEEEeCCCCcC-CCCCeEEEEecCCC
Q 016941 94 EFKLDRSGPFYFISGNHDHC-QKGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHC-q~GMKLaInV~ass 127 (380)
.|+.+++|.|+|.|....|+ ++||...|+|....
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 57788899999999998899 99999999997544
No 71
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=58.08 E-value=2.1 Score=34.03 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=15.6
Q ss_pred cCCCeEecCceeeeeeecC
Q 016941 46 SGRNRFLVNDTLFFKYKKG 64 (380)
Q Consensus 46 AS~kTF~VGDTLVFkY~aG 64 (380)
+..+.+++||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 3566889999999999764
No 72
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=57.67 E-value=6.1 Score=40.73 Aligned_cols=71 Identities=13% Similarity=0.270 Sum_probs=42.3
Q ss_pred CeEecCceeeeeeecCCceE----EEe-cccCCCCCCCCCCccccCC--CCcEEEeccccceEEEeCCCCcCCCCC-eEE
Q 016941 49 NRFLVNDTLFFKYKKGSDSV----LLV-NKDDYDSCNTKKPLLKLDS--GDSEFKLDRSGPFYFISGNHDHCQKGQ-KLI 120 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~HSV----veV-nK~dYdsCn~snpI~~fSs--GndvVtLdkpG~yYFICGV~gHCq~GM-KLa 120 (380)
.-++-|..|+|.=-. ++| +.+ +..+...|+..-- .|+. =+.+..|+ +|.|||..+..+-|+.|. ++.
T Consensus 413 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 487 (491)
T 3l6w_A 413 VVVKRGTKIMFMSVD--EAVTTPMLNLGSYTAMFKCKVPPF--SFHAFELGKMYSVE-SGDYFMTASTTELCNDNNLRIH 487 (491)
T ss_pred eEeecCCEEEEEecc--cchhhHHHhhhhhhhhhccccCCC--ccCcccccceEecC-CCceEecCChHHHHhCCceeEE
Confidence 345666666664322 122 111 2345556775432 1211 12344554 899999999999999998 999
Q ss_pred EEec
Q 016941 121 VVVL 124 (380)
Q Consensus 121 InV~ 124 (380)
|.|.
T Consensus 488 ~~~~ 491 (491)
T 3l6w_A 488 VHVD 491 (491)
T ss_pred EEeC
Confidence 9883
No 73
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=57.14 E-value=2.6 Score=36.17 Aligned_cols=26 Identities=27% Similarity=0.247 Sum_probs=19.3
Q ss_pred cCCCeEecCceeeeeeecCCceEEEe
Q 016941 46 SGRNRFLVNDTLFFKYKKGSDSVLLV 71 (380)
Q Consensus 46 AS~kTF~VGDTLVFkY~aG~HSVveV 71 (380)
+..+.+++||.++|.+.....-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 45678999999999998744335554
No 74
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=55.95 E-value=35 Score=31.73 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=27.9
Q ss_pred ccccceEEEeCCCCcCCCCCeEEEEecCCCCC
Q 016941 98 DRSGPFYFISGNHDHCQKGQKLIVVVLHERPP 129 (380)
Q Consensus 98 dkpG~yYFICGV~gHCq~GMKLaInV~asss~ 129 (380)
+.+|.+.|-|-+..|=++||.-.++|...+..
T Consensus 244 ~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 244 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTCC
T ss_pred CCCEeEEEEeCChHHHHCCCeEEEEEECCCCC
Confidence 35899999999999999999999999877644
No 75
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=53.99 E-value=14 Score=34.77 Aligned_cols=71 Identities=17% Similarity=0.225 Sum_probs=43.8
Q ss_pred CCeEecCceeeeeeecCC---ceE-----EEecccCCC------CCCCCCCccccCCCC---cEEEeccccceEEEeCCC
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSV-----LLVNKDDYD------SCNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNH 110 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSV-----veVnK~dYd------sCn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~ 110 (380)
.++++.||+|++++.+.. ++| .+......| .|. ...|. ..|+++++|+|||-|-..
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~-------I~PG~~~~y~f~~~~~Gt~wyH~H~~ 108 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQP-------IEAGDSYTYKFKADRIGTLWYHCHVN 108 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCC-------BCTTCEEEEEEECCSCEEEEEECCSS
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCc-------cCCCCeEEEEEECCCCEEEEEEecCC
Confidence 468899999999987642 222 211110011 122 12333 368888899999999765
Q ss_pred C--cCC-CCCeEEEEecC
Q 016941 111 D--HCQ-KGQKLIVVVLH 125 (380)
Q Consensus 111 g--HCq-~GMKLaInV~a 125 (380)
. |-. .||.-.|.|..
T Consensus 109 ~~~q~~~~Gl~G~liV~p 126 (339)
T 2zwn_A 109 VNEHVGVRGMWGPLIVDP 126 (339)
T ss_dssp HHHHTTTSCCEEEEEEEC
T ss_pred chhhhhcCCceEeEEecC
Confidence 4 444 89887777754
No 76
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=51.50 E-value=34 Score=31.75 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=27.9
Q ss_pred EEEeccccceEEEeCCCC-cCCCCCeEEEEecCCC
Q 016941 94 EFKLDRSGPFYFISGNHD-HCQKGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~g-HCq~GMKLaInV~ass 127 (380)
.|+.+++|.|+|.|.... |=..||.-.|.|....
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 577888999999999874 6688999888887543
No 77
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=51.40 E-value=2.1 Score=39.75 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=20.3
Q ss_pred EEEeccccceEEEeCCCCcCCCCCeEEEEecCC
Q 016941 94 EFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~GMKLaInV~as 126 (380)
.|+.+++|.|+|.|-+..|...||...|+|...
T Consensus 269 ~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 269 NMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp -------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 577888999999999999999999988888643
No 78
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=51.18 E-value=38 Score=31.36 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=27.4
Q ss_pred ccccceEEEeCCCCcCCCCCeEEEEecCCCC
Q 016941 98 DRSGPFYFISGNHDHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 98 dkpG~yYFICGV~gHCq~GMKLaInV~asss 128 (380)
+.+|.+.|-|-+..|=++||...++|.....
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 4589999999999999999999999987654
No 79
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=48.68 E-value=46 Score=33.54 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=60.2
Q ss_pred eEEEecCC-CCCccCCCCCcccccCC--CeEecCceeeeeeecC----CceE-------EEecc--cCC-------CCCC
Q 016941 24 LKFNVGGK-HGWVTNPGENYNKWSGR--NRFLVNDTLFFKYKKG----SDSV-------LLVNK--DDY-------DSCN 80 (380)
Q Consensus 24 ~tyvVGGs-~GWt~~P~~nYt~WAS~--kTF~VGDTLVFkY~aG----~HSV-------veVnK--~dY-------dsCn 80 (380)
+++..+.. ..|.++ +..|.+|... .+++.|++.++.+.+. .|-+ ..+.+ ..+ +. .
T Consensus 350 ~~~~~~~~~~~w~iN-G~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~-~ 427 (534)
T 3abg_A 350 RQFRFGRTGPTWTIN-GVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYES-G 427 (534)
T ss_dssp EEEECSCCCSTTCCC-CBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGG-S
T ss_pred eEEEEeccCceeEEC-CcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCcccc-C
Confidence 45555532 348875 4456666543 3678899888776542 3432 22333 211 11 1
Q ss_pred CCCCccccCCCCcEE--E-eccccceEEEeCCCCcCCCCCeEEEEecCCC
Q 016941 81 TKKPLLKLDSGDSEF--K-LDRSGPFYFISGNHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 81 ~snpI~~fSsGndvV--t-LdkpG~yYFICGV~gHCq~GMKLaInV~ass 127 (380)
.++-+.....+..+| . .+.+|.+.|=|-...|=..||...+.|....
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 122222222223333 3 4679999999999999999999999998765
No 80
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=47.18 E-value=2.9 Score=44.42 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=45.5
Q ss_pred CeEecCceeeeeeecC-----CceEE------Ee-cccCCCCCCCCCCccccCCCCc--EEEeccccceEEEeCCCCcCC
Q 016941 49 NRFLVNDTLFFKYKKG-----SDSVL------LV-NKDDYDSCNTKKPLLKLDSGDS--EFKLDRSGPFYFISGNHDHCQ 114 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG-----~HSVv------eV-nK~dYdsCn~snpI~~fSsGnd--vVtLdkpG~yYFICGV~gHCq 114 (380)
.+|+.||+++|.+.+. .|.+. +| ..+.+ ..+.+..+-.+.. .|..+++|.++|.|-+..|..
T Consensus 370 l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~----~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~ 445 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY----KMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLH 445 (770)
T ss_dssp CCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC----EESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHT
T ss_pred eEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc----eeeEEEECCCeEEEEEEEeCCCCceEEEeccccccc
Confidence 4688899998888652 34432 22 11111 1111222222222 566788999999999999999
Q ss_pred CCCeEEEEec
Q 016941 115 KGQKLIVVVL 124 (380)
Q Consensus 115 ~GMKLaInV~ 124 (380)
.||+..+.|.
T Consensus 446 ~GM~~~~~V~ 455 (770)
T 2r7e_B 446 AGMSTLFLVY 455 (770)
T ss_dssp TBCCCCCCBC
T ss_pred cccccccccc
Confidence 9999888885
No 81
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=44.68 E-value=13 Score=34.18 Aligned_cols=30 Identities=13% Similarity=0.346 Sum_probs=25.2
Q ss_pred EEEeccccceEEEeCCCCcCCCC---CeEEEEecC
Q 016941 94 EFKLDRSGPFYFISGNHDHCQKG---QKLIVVVLH 125 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~G---MKLaInV~a 125 (380)
.++.+++|.||..|.. .|..| |.+.|.|..
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 5778999999999986 88765 898888864
No 82
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=44.37 E-value=20 Score=33.55 Aligned_cols=77 Identities=12% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCeEecCceeeeeeecCC---ceEEE--eccc---CCCC-CCCCCCccccCCCC---cEEEeccccceEEEeCCCCc-C-
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSVLL--VNKD---DYDS-CNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDH-C- 113 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSVve--VnK~---dYds-Cn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gH-C- 113 (380)
.++++.||+|++++.+.. |++.. +... ..|. ..... .....|. ..|+++++|++||-|-.... +
T Consensus 35 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~--~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~ 112 (318)
T 3g5w_A 35 LIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQ--HAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHV 112 (318)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHH
T ss_pred eEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCccccc--ccCCCCCEEEEEEEcCCCEEEEEEccCChhhhh
Confidence 358999999999997642 33322 1100 1111 00000 0112333 36888899999999987421 1
Q ss_pred -CCCCeEEEEecCC
Q 016941 114 -QKGQKLIVVVLHE 126 (380)
Q Consensus 114 -q~GMKLaInV~as 126 (380)
..||.-.|.|...
T Consensus 113 ~~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 113 TMRGMWGPLIVEPK 126 (318)
T ss_dssp HHSCCEEEEEEECS
T ss_pred ccCCCEEEEEEcCC
Confidence 2699877777644
No 83
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=43.90 E-value=26 Score=35.07 Aligned_cols=75 Identities=8% Similarity=-0.025 Sum_probs=46.7
Q ss_pred CeEecCceeeeeeecC---CceE------EEe-ccc-CCCC-----CCCCCCccccCCCCc---EEEeccccceEEEeCC
Q 016941 49 NRFLVNDTLFFKYKKG---SDSV------LLV-NKD-DYDS-----CNTKKPLLKLDSGDS---EFKLDRSGPFYFISGN 109 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG---~HSV------veV-nK~-dYds-----Cn~snpI~~fSsGnd---vVtLdkpG~yYFICGV 109 (380)
.+++.||++++.+.+. .|.+ ++| ++. +-+. -...+-+. ...|.. .|..+.+|.+.|=|-+
T Consensus 387 ~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~-v~Pg~~~~i~~~~d~pG~w~~HCHi 465 (481)
T 3zx1_A 387 LSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTIN-VRPNEELRLRMKQDFKGLRMYHCHI 465 (481)
T ss_dssp EEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEE-ECTTCEEEEEECCCSCEEEEEEESS
T ss_pred EEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCCCcccCcccceEE-ECCCCEEEEEEEcCCCeeEEEEcCC
Confidence 4789999999988753 2443 222 220 1000 01111111 223332 4556889999999999
Q ss_pred CCcCCCCCeEEEEec
Q 016941 110 HDHCQKGQKLIVVVL 124 (380)
Q Consensus 110 ~gHCq~GMKLaInV~ 124 (380)
..|=..||...++|.
T Consensus 466 l~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 466 LEHEDLGMMGNLEVK 480 (481)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred hHHHhcCCceEEEEe
Confidence 999999999998886
No 84
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=43.78 E-value=10 Score=40.03 Aligned_cols=76 Identities=13% Similarity=0.132 Sum_probs=49.0
Q ss_pred CeEecCceeeeeeec-C----CceEEEecccCCCC-CCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCCCCCeE
Q 016941 49 NRFLVNDTLFFKYKK-G----SDSVLLVNKDDYDS-CNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQKGQKL 119 (380)
Q Consensus 49 kTF~VGDTLVFkY~a-G----~HSVveVnK~dYds-Cn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~GMKL 119 (380)
.+++.||+++|.+-+ + .|.+..- -..|+- -...+.+. ...|. ..|+.+.+|.|+|-|-+..|=..||..
T Consensus 628 l~v~~Ge~vr~rliN~g~~~~~h~~Hlh-Gh~f~v~~~~~Dtv~-l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~ 705 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGAQTDFLSVFFS-GYTFKHKMVYEDTLT-LFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTA 705 (742)
T ss_dssp CCCCSSCCCEEEEEECSSCCCCCCCEES-SSCCCCBSSSBCSSC-CCCCSSEECCEECCCCCCSCCEECCCSTTHHHHSC
T ss_pred EEEeCCCEEEEEEEeCCCCcceEEEEEc-CcEEEEeccceeEEE-ECCCcEEEEEEEcCCCeEEEEEeCCchHHhCCCeE
Confidence 689999999998865 2 2555331 111211 01112222 22233 256778899999999999999999998
Q ss_pred EEEecCC
Q 016941 120 IVVVLHE 126 (380)
Q Consensus 120 aInV~as 126 (380)
.+.|..-
T Consensus 706 ~~~V~~~ 712 (742)
T 2r7e_A 706 LLKVSSC 712 (742)
T ss_dssp CCCCCCC
T ss_pred EEEEEeC
Confidence 8888754
No 85
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=42.27 E-value=50 Score=33.05 Aligned_cols=78 Identities=13% Similarity=0.198 Sum_probs=48.6
Q ss_pred CCeEecCceeeeeeecCC----ceEEE--ecc--cC-CCC-CCCCCCccccCCCC---cEEEeccccceEEEeCCCCcCC
Q 016941 48 RNRFLVNDTLFFKYKKGS----DSVLL--VNK--DD-YDS-CNTKKPLLKLDSGD---SEFKLDRSGPFYFISGNHDHCQ 114 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~----HSVve--VnK--~d-Yds-Cn~snpI~~fSsGn---dvVtLdkpG~yYFICGV~gHCq 114 (380)
.++++.||+|+.++.+.. ++|.. +.+ .. .|. ...++ .-...|. .+|+++..|+|||=|-...+=.
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq--~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~ 112 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ--CAINPGETFFYNFTVDNPGTFFYHGHLGMQRS 112 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECCSCEEEEEEECSTTTGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc--CCcCCCCeEEEEEECCCCEEEEEEECchhHHh
Confidence 458999999999997753 23322 111 10 111 00000 0012333 3688889999999999888878
Q ss_pred CCCeEEEEecCCC
Q 016941 115 KGQKLIVVVLHER 127 (380)
Q Consensus 115 ~GMKLaInV~ass 127 (380)
.||.-.|.|....
T Consensus 113 ~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 113 AGLYGSLIVDPPQ 125 (552)
T ss_dssp GTCEEEEEEECCT
T ss_pred ccCeeeEEEeCCc
Confidence 8998888887654
No 86
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=41.05 E-value=19 Score=35.37 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=46.7
Q ss_pred CeEecCceeeeeeecCC---ceEEE----ec--ccCCCCCCCCCCccccCCCC---cEEEecc-ccceEEEeCCC----C
Q 016941 49 NRFLVNDTLFFKYKKGS---DSVLL----VN--KDDYDSCNTKKPLLKLDSGD---SEFKLDR-SGPFYFISGNH----D 111 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~---HSVve----Vn--K~dYdsCn~snpI~~fSsGn---dvVtLdk-pG~yYFICGV~----g 111 (380)
++++.||+|++++.+.. ++|.. +. .+....|-+. .|. ..|+++. .|+|||=|-.. .
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~-------PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~ 124 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMS-------PNADWAPVLPIRQNAATLWYHANTPNRTAQ 124 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGCBC-------TTCEECCEEECCSCSEEEEEEECCTTTHHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcCcCC-------CCCeEEEEEEcCCCCcceEEecCCCCchhh
Confidence 37899999999998753 34422 11 1112234322 222 4788887 89999999873 3
Q ss_pred cCCCCCeEEEEecCCC
Q 016941 112 HCQKGQKLIVVVLHER 127 (380)
Q Consensus 112 HCq~GMKLaInV~ass 127 (380)
|-..||--.|.|....
T Consensus 125 q~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 125 QVYNGLAGMWLVEDEV 140 (451)
T ss_dssp HHHTTCEEEEEEECHH
T ss_pred hHhhcceEEEEEecCc
Confidence 5668998888877543
No 87
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=39.53 E-value=34 Score=34.41 Aligned_cols=73 Identities=18% Similarity=0.368 Sum_probs=48.6
Q ss_pred CCeEecCceeeeeeecCCc----eEEE----ecc-cCCC------CCCCCCCccccCCCC---cEEEec-cccceEEEeC
Q 016941 48 RNRFLVNDTLFFKYKKGSD----SVLL----VNK-DDYD------SCNTKKPLLKLDSGD---SEFKLD-RSGPFYFISG 108 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~H----SVve----VnK-~dYd------sCn~snpI~~fSsGn---dvVtLd-kpG~yYFICG 108 (380)
.++++.||+|+.++.+... +|.. +.. ...| .|-+ ..|. ..|+++ ..|+|||-|-
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI-------~PG~~~~Y~f~~~~~~GT~wYH~H 107 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPI-------APGSTMLYNFTVDYNVGTYWYHSH 107 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCB-------CTTCEEEEEEECSSCCEEEEEECC
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCc-------CCCCeEEEEEEeCccceeEEEEEc
Confidence 4589999999999987542 2211 110 0111 1321 2233 368888 8999999999
Q ss_pred CCCcCCCCCeEEEEecCCC
Q 016941 109 NHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 109 V~gHCq~GMKLaInV~ass 127 (380)
...|-..||.-.|.|....
T Consensus 108 ~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 108 TDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp SSSGGGGTCEEEEEEECTT
T ss_pred CcccccCcceeeEEeCCCC
Confidence 9888888999888887653
No 88
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=39.16 E-value=28 Score=35.14 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=48.6
Q ss_pred CCeEecCceeeeeeecCC----ceEEE--ecc---cCCC------CCCCCCCccccCC-CC---cEEEeccccceEEEeC
Q 016941 48 RNRFLVNDTLFFKYKKGS----DSVLL--VNK---DDYD------SCNTKKPLLKLDS-GD---SEFKLDRSGPFYFISG 108 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~----HSVve--VnK---~dYd------sCn~snpI~~fSs-Gn---dvVtLdkpG~yYFICG 108 (380)
.++++.||+|+.++.+.. ++|.. +.. ..+| .|-+ .. |. .+|++++.|+|||=|-
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I-------~P~G~~~~Y~f~~~q~GT~wYH~H 140 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI-------PPKGGQRTYRWRARQYGTSWYHSH 140 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB-------CTTTEEEEEEEECCSCEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCcc-------CCCCCeEEEEEECCCCEEEEEEEc
Confidence 357899999999987643 34422 111 1111 1321 22 43 3788899999999999
Q ss_pred CCCcCCCCCeEEEEecCCC
Q 016941 109 NHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 109 V~gHCq~GMKLaInV~ass 127 (380)
...|=..||.-.|.|....
T Consensus 141 ~~~q~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 141 FSAQYGNGVVGTIQINGPA 159 (559)
T ss_dssp STTGGGGTCEEEEEEECCC
T ss_pred ccchhcCCceEEEEecCCC
Confidence 9888888998888887543
No 89
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=39.13 E-value=48 Score=33.17 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=46.9
Q ss_pred CCeEecCceeeeeeecCC--------ceEEE--ecc---cCCC------CCCCCCCccccCCCC---cEEEe-ccccceE
Q 016941 48 RNRFLVNDTLFFKYKKGS--------DSVLL--VNK---DDYD------SCNTKKPLLKLDSGD---SEFKL-DRSGPFY 104 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~--------HSVve--VnK---~dYd------sCn~snpI~~fSsGn---dvVtL-dkpG~yY 104 (380)
.++++.||+|+.++.+.. ++|.. +.+ ...| .|-+ ..|. .+|++ ++.|+||
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI-------~PG~sftY~f~~~~~~GT~w 108 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPI-------IVGNSFSYNFNVPGMAGTYW 108 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCB-------CTTCEEEEEEECTTCCEEEE
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCC-------CCCCeEEEEEEeCCCCceee
Confidence 357899999999997753 23422 111 0111 1221 2233 36778 6799999
Q ss_pred EEeCCCCcCCCCCeEEEEecCC
Q 016941 105 FISGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 105 FICGV~gHCq~GMKLaInV~as 126 (380)
|-|-...+-..||.-.|.|...
T Consensus 109 YHsH~~~q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 109 YHSHLTTQYCDGLRGPFVVYDP 130 (495)
T ss_dssp EEECSTTGGGGTCEEEEEEECT
T ss_pred eeccchhHHhcCceEEEEEcCc
Confidence 9999887778899888888654
No 90
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=38.69 E-value=42 Score=32.53 Aligned_cols=74 Identities=20% Similarity=0.304 Sum_probs=44.1
Q ss_pred CCeEecCceeeeeeecCC---ceEEE--eccc-CCCCCCCCCCccccCCCC---cEEEec--cccceEEEeCCCC----c
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSVLL--VNKD-DYDSCNTKKPLLKLDSGD---SEFKLD--RSGPFYFISGNHD----H 112 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSVve--VnK~-dYdsCn~snpI~~fSsGn---dvVtLd--kpG~yYFICGV~g----H 112 (380)
.++++.||+|+.++.+.. ++|.. +... ..|. .......|. .+|++. .+|+|||-|-..+ |
T Consensus 48 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG-----~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q 122 (439)
T 2xu9_A 48 TLRVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDD-----PFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQ 122 (439)
T ss_dssp EEEECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSC-----TTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCCcceEeCCCCCCccccC-----CcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHH
Confidence 357899999999987743 33322 1100 1111 101123343 256663 5899999998743 5
Q ss_pred CCCCCeEEEEecCC
Q 016941 113 CQKGQKLIVVVLHE 126 (380)
Q Consensus 113 Cq~GMKLaInV~as 126 (380)
-..||.-.|.|...
T Consensus 123 ~~~Gl~G~liV~~~ 136 (439)
T 2xu9_A 123 LFAGLLGALVVESS 136 (439)
T ss_dssp HHTTCCEEEEECCG
T ss_pred HHhhCeEEEEEcCc
Confidence 56799888887654
No 91
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=37.64 E-value=79 Score=31.70 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=46.9
Q ss_pred CCeEecCceeeeeeecCC--------ceEEE--ecc---cCCC------CCCCCCCccccCCCC---cEEEe-ccccceE
Q 016941 48 RNRFLVNDTLFFKYKKGS--------DSVLL--VNK---DDYD------SCNTKKPLLKLDSGD---SEFKL-DRSGPFY 104 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~--------HSVve--VnK---~dYd------sCn~snpI~~fSsGn---dvVtL-dkpG~yY 104 (380)
.++++.||+|+.++.+.. ++|.. +.+ ...| .|-+ ..|. .+|++ ++.|+||
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI-------~PG~s~tY~f~~~~~~GT~w 107 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPI-------SPGHSFLYDFQVPDQAGTFW 107 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCB-------CTTCEEEEEEECSSCCEEEE
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCC-------CCCCeEEEEEEcCCCCceee
Confidence 358999999999987743 23422 111 0111 1311 2333 36777 6799999
Q ss_pred EEeCCCCcCCCCCeEEEEecCC
Q 016941 105 FISGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 105 FICGV~gHCq~GMKLaInV~as 126 (380)
|-|-...+-..||.-.|.|...
T Consensus 108 YHsH~~~q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 108 YHSHLSTQYCDGLRGPFVVYDP 129 (499)
T ss_dssp EEECSTTGGGGTCEEEEEEECT
T ss_pred eeccchhHHhccceeEEEEcCC
Confidence 9999887778899888888654
No 92
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=37.31 E-value=2.4 Score=43.22 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=3.4
Q ss_pred CcchhHHHHHHHHHHHHhhcccceEEEecC
Q 016941 1 MEFQKSLCLSLALFAFFISSSHALKFNVGG 30 (380)
Q Consensus 1 Ma~~k~l~llLaLLAaL~s~AsA~tyvVGG 30 (380)
|-.++.++++|++++++...|.++++.|.+
T Consensus 1 M~~~~~~~~~lll~~~~~~~A~~~~i~V~~ 30 (506)
T 1dbg_A 1 MKMLNKLAGYLLPIMVLLNVAPCLGQVVAS 30 (506)
T ss_dssp -------------------------CEECS
T ss_pred CchHHHHHHHHHHHHHhhhhheeeEEEeCC
Confidence 666666544333332333344445567864
No 93
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=34.33 E-value=34 Score=37.48 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=49.3
Q ss_pred CCeEecCceeeeeeecC-----CceEEEecccCCCCCC----CCCCccccCCCCc--EEEeccccceEEEeCCCCcCCCC
Q 016941 48 RNRFLVNDTLFFKYKKG-----SDSVLLVNKDDYDSCN----TKKPLLKLDSGDS--EFKLDRSGPFYFISGNHDHCQKG 116 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG-----~HSVveVnK~dYdsCn----~snpI~~fSsGnd--vVtLdkpG~yYFICGV~gHCq~G 116 (380)
..+++.||++++.+.+. .|.+..- -..|+--. ..+-+...-.+.. .|..+.+|.+.|-|-+..|=..|
T Consensus 971 ~~~v~~G~~vr~~l~N~g~~~~~HpfHlH-G~~F~vv~~~p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~G 1049 (1065)
T 2j5w_A 971 GLTMHVGDEVNWYLMGMGNEIDLHTVHFH-GHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAG 1049 (1065)
T ss_dssp CCEEETTCEEEEEEEECCSTTCCEEEEES-SCCEEETTTTCEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTT
T ss_pred cEEeCCCCEEEEEEEeCCCCCcceeEEEc-ccEEEEEecCCceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcC
Confidence 35789999999988662 3555331 01111100 0111112122222 46678899999999999999999
Q ss_pred CeEEEEecCCC
Q 016941 117 QKLIVVVLHER 127 (380)
Q Consensus 117 MKLaInV~ass 127 (380)
|...+.|....
T Consensus 1050 M~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1050 METTYTVLQNE 1060 (1065)
T ss_dssp CEEEEEEECCC
T ss_pred CcEEEEEecCc
Confidence 99999997543
No 94
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=32.99 E-value=15 Score=30.17 Aligned_cols=13 Identities=0% Similarity=0.140 Sum_probs=2.8
Q ss_pred CeEecCceeeeee
Q 016941 49 NRFLVNDTLFFKY 61 (380)
Q Consensus 49 kTF~VGDTLVFkY 61 (380)
..+..||.+.+..
T Consensus 33 ~~v~~G~~v~L~C 45 (233)
T 3bqu_C 33 LSMSIGEKVTIRC 45 (233)
T ss_dssp C-------CCEEE
T ss_pred EEEecCCCEEEEE
Confidence 3455555555544
No 95
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=32.47 E-value=1e+02 Score=24.90 Aligned_cols=15 Identities=13% Similarity=0.073 Sum_probs=9.1
Q ss_pred CeEecCceeeeeeec
Q 016941 49 NRFLVNDTLFFKYKK 63 (380)
Q Consensus 49 kTF~VGDTLVFkY~a 63 (380)
..+..||.++|....
T Consensus 34 ~~v~~G~~v~L~C~~ 48 (237)
T 3sob_L 34 LSASVGDRVTITCRA 48 (237)
T ss_dssp EEEETTCCEEEEEEE
T ss_pred EEEeCCCcEEEEEec
Confidence 456667666666543
No 96
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=31.50 E-value=59 Score=35.62 Aligned_cols=75 Identities=11% Similarity=0.121 Sum_probs=49.9
Q ss_pred CCeEecCceeeeeeecCC-----ceEEEecccCCCCCCCCCCc----cccCCCC---cEEEeccccceEEEeCCCCcCCC
Q 016941 48 RNRFLVNDTLFFKYKKGS-----DSVLLVNKDDYDSCNTKKPL----LKLDSGD---SEFKLDRSGPFYFISGNHDHCQK 115 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~-----HSVveVnK~dYdsCn~snpI----~~fSsGn---dvVtLdkpG~yYFICGV~gHCq~ 115 (380)
..+|+.|++++|++-+.. |.+. +....|. . ++. .....|. ..|+.+++|.|+|.|-...|=..
T Consensus 272 ~l~v~~Ge~vRlRliNag~~~~~~~~~-i~Gh~f~---v-~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~ 346 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGNEVDVHAAF-FHGQALT---N-KNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKA 346 (1065)
T ss_dssp CCEEETTCEEEEEEEECSSTTCCEEEE-ETTCCEE---E-TTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHT
T ss_pred ceEECCCCEEEEEEEcCCcccceeEEE-EcCCEEE---E-CCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhC
Confidence 468999999999996632 3332 2222222 1 111 1123343 25778889999999999999999
Q ss_pred CCeEEEEecCCC
Q 016941 116 GQKLIVVVLHER 127 (380)
Q Consensus 116 GMKLaInV~ass 127 (380)
||...|.|....
T Consensus 347 Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 347 GLQAFFQVQECN 358 (1065)
T ss_dssp TCEEEEEEECSC
T ss_pred CCEEEEEEecCC
Confidence 999999997543
No 97
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=30.99 E-value=62 Score=33.32 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=28.8
Q ss_pred cEEEeccccceEEEeCCCCcCCCCCeEEEEecCCC
Q 016941 93 SEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 93 dvVtLdkpG~yYFICGV~gHCq~GMKLaInV~ass 127 (380)
.+|++++.|+|||=|-...+=..||.-.|.|....
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 36888999999999998878788998888887543
No 98
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=30.69 E-value=64 Score=31.27 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=45.8
Q ss_pred CeEecCceeeeeeecC---Cce---------EEEecccCCCCCCCCCCccccCCCCc--EEEeccccceEEEeCCCCcCC
Q 016941 49 NRFLVNDTLFFKYKKG---SDS---------VLLVNKDDYDSCNTKKPLLKLDSGDS--EFKLDRSGPFYFISGNHDHCQ 114 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG---~HS---------VveVnK~dYdsCn~snpI~~fSsGnd--vVtLdkpG~yYFICGV~gHCq 114 (380)
..++.|+++++.+.+. .|- |+..+...|+.=-.++-+.....|.. .|..+.+|.+.|=|-...|=.
T Consensus 350 ~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~ 429 (439)
T 2xu9_A 350 LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHED 429 (439)
T ss_dssp EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHH
T ss_pred eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhh
Confidence 4688899888777653 233 23223333321111121222223333 456688999999999999999
Q ss_pred CCCeEEEEe
Q 016941 115 KGQKLIVVV 123 (380)
Q Consensus 115 ~GMKLaInV 123 (380)
.||-..|.|
T Consensus 430 ~GMm~~~~V 438 (439)
T 2xu9_A 430 RGMMGVLEV 438 (439)
T ss_dssp TTCEEEEEE
T ss_pred cCCcEEEEe
Confidence 999988887
No 99
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=29.66 E-value=80 Score=29.24 Aligned_cols=16 Identities=19% Similarity=0.301 Sum_probs=14.1
Q ss_pred CeEecCceeeeeeecC
Q 016941 49 NRFLVNDTLFFKYKKG 64 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG 64 (380)
+++++||+|++++.+.
T Consensus 44 i~~~~Gd~v~v~~~N~ 59 (313)
T 3tas_A 44 IELNEGDTLHIEFENT 59 (313)
T ss_dssp EEEETTCEEEEEEEEC
T ss_pred EEEECCCEEEEEEEEC
Confidence 5899999999999874
No 100
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=28.45 E-value=40 Score=35.57 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=28.5
Q ss_pred EEEeccccceEEEeCCCCcCCCCCeEEEEecCC
Q 016941 94 EFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHE 126 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~GMKLaInV~as 126 (380)
.|+.+++|.++|-|-...|=..||.-.+.|...
T Consensus 298 ~~~~~~pG~w~~hCH~~~H~~~GM~~~~~V~~~ 330 (742)
T 2r7e_A 298 QTLLMDLGQFLLFCHISSHQHDGMEAYVKVDSC 330 (742)
T ss_dssp EECCCSCSEECCCCCSSSSSTTSCCBCEEECCC
T ss_pred EEEeCCCeeEEEEeCChhHHhCCCeEEEEEecC
Confidence 567788999999999999999999888888643
No 101
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=27.29 E-value=21 Score=29.80 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=10.1
Q ss_pred CeEecCceeee
Q 016941 49 NRFLVNDTLFF 59 (380)
Q Consensus 49 kTF~VGDTLVF 59 (380)
+.+++||+|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 102
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=27.20 E-value=2e+02 Score=26.59 Aligned_cols=15 Identities=7% Similarity=0.253 Sum_probs=13.1
Q ss_pred CeEecCceeeeeeec
Q 016941 49 NRFLVNDTLFFKYKK 63 (380)
Q Consensus 49 kTF~VGDTLVFkY~a 63 (380)
.++..||+|.|+|..
T Consensus 89 ~~v~AG~~v~~~~~~ 103 (249)
T 2vtc_A 89 ATAAAGSNIVFQWGP 103 (249)
T ss_dssp EEEETTCEEEEEEES
T ss_pred EEECCCCEEEEEEec
Confidence 468999999999976
No 103
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=26.50 E-value=12 Score=31.16 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=13.4
Q ss_pred CCCeEecCceeeeeeec
Q 016941 47 GRNRFLVNDTLFFKYKK 63 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~a 63 (380)
..+.+++||+|+|.+..
T Consensus 88 ~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 88 KEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHTTCCTTCEEEEEECC
T ss_pred HHcCCCCCCEEEEEEec
Confidence 45577889999998875
No 104
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=25.49 E-value=1.1e+02 Score=30.32 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=0.0
Q ss_pred CeEecCceeeeeeecCC-------------ceEEEecccCCCCCCCCCCccccCCCCcEEEec---cccceEEEeCCCCc
Q 016941 49 NRFLVNDTLFFKYKKGS-------------DSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLD---RSGPFYFISGNHDH 112 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~-------------HSVveVnK~dYdsCn~snpI~~fSsGndvVtLd---kpG~yYFICGV~gH 112 (380)
++++.||+|+.++.+.. |.+.+......|.--.-.--.+.-.+..++.+. +.|+|||=|-...+
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 115 (503)
T 1hfu_A 36 IRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQ 115 (503)
T ss_dssp EEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTG
T ss_pred EEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhh
Q ss_pred CCCCCeEEEEecCCC
Q 016941 113 CQKGQKLIVVVLHER 127 (380)
Q Consensus 113 Cq~GMKLaInV~ass 127 (380)
-..||--.|.|....
T Consensus 116 ~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 116 YCDGLRGPMVIYDDN 130 (503)
T ss_dssp GGGTCEEEEEEECTT
T ss_pred hhCcceeeEEEcCCC
No 105
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=24.84 E-value=79 Score=28.69 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=43.0
Q ss_pred CeEecCceeeeeeecCC---ceEEE--ecc-cCCCCCCCCCCccccCCCC---cEEEecc-------------ccceEEE
Q 016941 49 NRFLVNDTLFFKYKKGS---DSVLL--VNK-DDYDSCNTKKPLLKLDSGD---SEFKLDR-------------SGPFYFI 106 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~---HSVve--VnK-~dYdsCn~snpI~~fSsGn---dvVtLdk-------------pG~yYFI 106 (380)
++++.||+|++++.+.. ++|.. +.. ...|.-.... .....|. ..|++++ .|++||-
T Consensus 38 i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t~--~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH 115 (276)
T 3kw8_A 38 IEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMNK--SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYH 115 (276)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTT--CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEE
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCcccCCccCCCcCCc--CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEe
Confidence 37899999999997743 23322 100 1111100000 0112333 3677764 4889999
Q ss_pred eCCCC------cCCCCCeEEEEecCCC
Q 016941 107 SGNHD------HCQKGQKLIVVVLHER 127 (380)
Q Consensus 107 CGV~g------HCq~GMKLaInV~ass 127 (380)
|-..+ |=..||.-.|.|....
T Consensus 116 ~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 116 DHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp CSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred cCccccccchhhhhCccEEEEEEecCC
Confidence 98754 4457998887777554
No 106
>2vgd_A Enxyn11A; glycoside hydrolase, xylanase, beta jelly roll, hydrolase; HET: XYP FX3; 1.8A {Escherichia coli} PDB: 2vuj_A 2vul_A*
Probab=24.76 E-value=17 Score=34.07 Aligned_cols=46 Identities=20% Similarity=0.209 Sum_probs=11.0
Q ss_pred CcchhHHHHHHHHHHHHhhcccceEEEecCCCCCccCCCCCcccccCC
Q 016941 1 MEFQKSLCLSLALFAFFISSSHALKFNVGGKHGWVTNPGENYNKWSGR 48 (380)
Q Consensus 1 Ma~~k~l~llLaLLAaL~s~AsA~tyvVGGs~GWt~~P~~nYt~WAS~ 48 (380)
|...|.|+++++.+++....+.+...+-....|+. .+.+|..|.++
T Consensus 1 m~~~~~l~~~~~a~~~~~~~~~a~~~~t~n~~G~~--~Gy~Y~~W~dg 46 (218)
T 2vgd_A 1 MISLKRVAALLCVAGLGMSAANAQTCLTSSQTGTN--NGFYYSFWKDS 46 (218)
T ss_dssp ----------------------CCEEECSCEEEEE--TTEEEEEEECS
T ss_pred CeeHHHHHHHHHHHHhccchhccccccccCccccc--CCEEEEEEecC
Confidence 66666665544333333333334332222223332 13567888765
No 107
>3nb3_A Outer membrane protein A; virus assembly, cementing protein, bacteriophage, SF6, shige beta-barrel, icosahedral, virus; 19.00A {Escherichia coli}
Probab=24.76 E-value=18 Score=33.02 Aligned_cols=11 Identities=36% Similarity=0.924 Sum_probs=7.6
Q ss_pred EEEecCCCCCc
Q 016941 25 KFNVGGKHGWV 35 (380)
Q Consensus 25 tyvVGGs~GWt 35 (380)
.+.||+..||.
T Consensus 27 ~~yvg~~~G~~ 37 (346)
T 3nb3_A 27 TWYTGAKLGWS 37 (346)
T ss_dssp EEEEEEEEEEE
T ss_pred CceEEEeeeee
Confidence 47788776664
No 108
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=24.75 E-value=1.1e+02 Score=28.19 Aligned_cols=77 Identities=12% Similarity=0.046 Sum_probs=43.1
Q ss_pred CeEecCceeeeeeecCC---ceEEE----ecccCCCC-CCCCCC------ccccCCCC---cEEEeccc----------c
Q 016941 49 NRFLVNDTLFFKYKKGS---DSVLL----VNKDDYDS-CNTKKP------LLKLDSGD---SEFKLDRS----------G 101 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~---HSVve----VnK~dYds-Cn~snp------I~~fSsGn---dvVtLdkp----------G 101 (380)
++++.||+|++++.+.. ++|.. +..+ .|. +...+. ......|. .+|++++. |
T Consensus 62 I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~-~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~G 140 (306)
T 1sdd_A 62 LYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF-SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCL 140 (306)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEESSCCCTT-TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEE
T ss_pred EEEeCCCEEEEEEEECCCCcccEeecceecccc-cCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCce
Confidence 47999999999997743 22211 1110 111 111110 00112333 36777654 7
Q ss_pred ceEEEeCCCC--cCCCCCeEEEEecCC
Q 016941 102 PFYFISGNHD--HCQKGQKLIVVVLHE 126 (380)
Q Consensus 102 ~yYFICGV~g--HCq~GMKLaInV~as 126 (380)
+|||-|-... +-..||.-.|.|...
T Consensus 141 T~wYHsH~~~~~q~~~GL~G~liV~~~ 167 (306)
T 1sdd_A 141 THIYYSYVNLVEDFNSGLIGPLLICKK 167 (306)
T ss_dssp EEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred EEEEeccCCchhhhccCceEEEEEccC
Confidence 9999997654 556899877777644
No 109
>4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis}
Probab=24.70 E-value=14 Score=35.46 Aligned_cols=11 Identities=45% Similarity=0.501 Sum_probs=0.0
Q ss_pred CcchhHHHHHH
Q 016941 1 MEFQKSLCLSL 11 (380)
Q Consensus 1 Ma~~k~l~llL 11 (380)
|..||..+|++
T Consensus 4 m~~k~~~~l~~ 14 (422)
T 4gb7_A 4 MKLKKSPLLLL 14 (422)
T ss_dssp -----------
T ss_pred hhHHHHHHHHH
Confidence 77777776543
No 110
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=24.67 E-value=36 Score=28.03 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=23.8
Q ss_pred EEEecCCCCCccCCCCC-----ccccc-CCCeEecCceeeeeeecCC
Q 016941 25 KFNVGGKHGWVTNPGEN-----YNKWS-GRNRFLVNDTLFFKYKKGS 65 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~n-----Yt~WA-S~kTF~VGDTLVFkY~aG~ 65 (380)
.|.+|+ ..|+..+++. +..|. ..+...-++.|.|.|+.+.
T Consensus 26 Hy~~~~-g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F~dG~ 71 (102)
T 2c3v_A 26 HYSLNQ-GAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAFNNGS 71 (102)
T ss_dssp EEEETT-CCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEEECSS
T ss_pred EEeCCC-CCcccCCCcCccccccCCceEEEEecCCCceEEEEEeCCC
Confidence 344555 4698766532 45563 3333444689999997654
No 111
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=24.65 E-value=46 Score=26.76 Aligned_cols=33 Identities=9% Similarity=0.173 Sum_probs=24.7
Q ss_pred eEEEecCCCCCccCCCCCccccc--CCCeEecCceeeeee
Q 016941 24 LKFNVGGKHGWVTNPGENYNKWS--GRNRFLVNDTLFFKY 61 (380)
Q Consensus 24 ~tyvVGGs~GWt~~P~~nYt~WA--S~kTF~VGDTLVFkY 61 (380)
+..++||+.| ...++.|. ....|..||+|.++.
T Consensus 37 ~~~~l~DeTG-----~I~~t~W~~~~~~~~~~G~~V~i~n 71 (109)
T 2kbn_A 37 QVGLLGDETG-----IIKFTIWKNAELPLLEQGESYLLRS 71 (109)
T ss_dssp EEEEEECTTC-----CEEEEEEGGGCCCCCCTTCEEEEEE
T ss_pred EEEEEECCCC-----eEEEEEECcccccccCCCCEEEEEE
Confidence 3567888877 24678897 334799999999983
No 112
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=24.64 E-value=78 Score=32.81 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=28.9
Q ss_pred EEEec-cccceEEEeCCCCcCCCCCeEEEEecCCC
Q 016941 94 EFKLD-RSGPFYFISGNHDHCQKGQKLIVVVLHER 127 (380)
Q Consensus 94 vVtLd-kpG~yYFICGV~gHCq~GMKLaInV~ass 127 (380)
.|..+ .+|.|.|=|-+..|=..||...++|....
T Consensus 559 ~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred EEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 35677 89999999999999999999999987543
No 113
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=24.52 E-value=1.5e+02 Score=29.65 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=26.7
Q ss_pred EEEeccccceEEEeCCCCcCCCCCeEEEEec
Q 016941 94 EFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 124 (380)
Q Consensus 94 vVtLdkpG~yYFICGV~gHCq~GMKLaInV~ 124 (380)
.|..+.+|.+.|=|-...|=..||.+.+.+.
T Consensus 440 rf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (495)
T 3t6v_A 440 RFCTDNPGPWFLHCHIDWHLDAGFAIVFAED 470 (495)
T ss_dssp EEECCSCEEEEEEESCHHHHHTTCEEEEEET
T ss_pred EEEcCCCeeEEEEecchhHhhcCCeEEEEEC
Confidence 5677899999999999999999998887654
No 114
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=24.50 E-value=43 Score=26.21 Aligned_cols=24 Identities=8% Similarity=0.110 Sum_probs=18.1
Q ss_pred ccccCCCeEecCceeeeeeecCCc
Q 016941 43 NKWSGRNRFLVNDTLFFKYKKGSD 66 (380)
Q Consensus 43 t~WAS~kTF~VGDTLVFkY~aG~H 66 (380)
.+.+.-..+++||.|.|.+.....
T Consensus 40 ~~~~~l~~lk~Gd~V~F~~~~~~~ 63 (82)
T 2l55_A 40 PPAGLPQGLKAGDRVAFSFRLDPH 63 (82)
T ss_dssp CTTCCCSSCSTTCEEEEEEEEETT
T ss_pred CChhHhhcCCCCCEEEEEEEECCC
Confidence 444445689999999999987544
No 115
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=22.89 E-value=44 Score=25.94 Aligned_cols=18 Identities=11% Similarity=0.285 Sum_probs=14.9
Q ss_pred CCeEecCceeeeeeecCC
Q 016941 48 RNRFLVNDTLFFKYKKGS 65 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~ 65 (380)
-..|++||.|.|.|....
T Consensus 51 l~~lk~Gd~V~F~~~~~~ 68 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQG 68 (80)
T ss_dssp ECCCCTTCEEEEEEEEET
T ss_pred hhcCCCCCEEEEEEEEeC
Confidence 457999999999997644
No 116
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=22.49 E-value=47 Score=25.56 Aligned_cols=18 Identities=28% Similarity=0.183 Sum_probs=14.6
Q ss_pred CCCeEecCceeeeeeecC
Q 016941 47 GRNRFLVNDTLFFKYKKG 64 (380)
Q Consensus 47 S~kTF~VGDTLVFkY~aG 64 (380)
.+++|.+||.|+|.-..+
T Consensus 26 ~rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 26 QRNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp ESSCBCTTCEEEEESTTS
T ss_pred EcCCcCCCCEEEEEcCCC
Confidence 477999999999876554
No 117
>1whl_A Cylindromatosis tumor suppressor CYLD; deubiquitinating enzyme, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=22.43 E-value=51 Score=26.57 Aligned_cols=15 Identities=7% Similarity=0.013 Sum_probs=11.3
Q ss_pred CeEecCceeeeeeec
Q 016941 49 NRFLVNDTLFFKYKK 63 (380)
Q Consensus 49 kTF~VGDTLVFkY~a 63 (380)
..|+|||.++.....
T Consensus 6 ~~~~VG~rV~V~~~~ 20 (95)
T 1whl_A 6 SGIDVGCPVKVQLRS 20 (95)
T ss_dssp CCCCSSCEEEEECSS
T ss_pred ccCcCCCEEEEecCC
Confidence 468999999886543
No 118
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=21.57 E-value=47 Score=26.29 Aligned_cols=23 Identities=9% Similarity=0.189 Sum_probs=17.3
Q ss_pred ccccCCCeEecCceeeeeeecCC
Q 016941 43 NKWSGRNRFLVNDTLFFKYKKGS 65 (380)
Q Consensus 43 t~WAS~kTF~VGDTLVFkY~aG~ 65 (380)
.+.+.-..|++||.|.|.|....
T Consensus 54 ~~~~~l~~lk~Gd~V~F~~~~~~ 76 (88)
T 2vb2_X 54 TPQTKMSEIKTGDKVAFNFVQQG 76 (88)
T ss_dssp CTTCEECCCCTTCEEEEEEEEET
T ss_pred CChhhhhcCCCCCEEEEEEEEeC
Confidence 34444567999999999997644
No 119
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=21.31 E-value=38 Score=33.17 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=46.8
Q ss_pred CCeEecCceeeeeeecCC---ceEEE----ec--ccCCCCCCCCCCccccCCCC---cEEEec-cccceEEEeCC----C
Q 016941 48 RNRFLVNDTLFFKYKKGS---DSVLL----VN--KDDYDSCNTKKPLLKLDSGD---SEFKLD-RSGPFYFISGN----H 110 (380)
Q Consensus 48 ~kTF~VGDTLVFkY~aG~---HSVve----Vn--K~dYdsCn~snpI~~fSsGn---dvVtLd-kpG~yYFICGV----~ 110 (380)
.++++.||+|+.++.+.. ++|.. +. .+....|-+. .|. ..|+++ ..|+|||=|-. .
T Consensus 39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~-------PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~ 111 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFAIT-------PGESYNYSFDVVNRAGTYLYHPHPHGLTA 111 (448)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGCBC-------TTCEEEEEEECCSCSEEEEEEECCTTTHH
T ss_pred eEEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCccCC-------CCCEEEEEEEcCCCCCceEeccCCCCchH
Confidence 357899999999998753 33322 11 1111124322 232 368887 68999999984 3
Q ss_pred CcCCCCCeEEEEecCCCC
Q 016941 111 DHCQKGQKLIVVVLHERP 128 (380)
Q Consensus 111 gHCq~GMKLaInV~asss 128 (380)
.+-..||--.|.|.....
T Consensus 112 ~q~~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 112 KQFYMGQLGLVIVEDSGS 129 (448)
T ss_dssp HHHHTTCCEEEEEECTTT
T ss_pred HHHhccceEEEEEeCCcc
Confidence 355689988888876543
No 120
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=21.11 E-value=66 Score=34.21 Aligned_cols=76 Identities=12% Similarity=0.167 Sum_probs=44.2
Q ss_pred CeEecCceeeeeeecCC--------ceEEEecccCCCCCCCCCCccccCCCCc---EEEec----------cccceEEEe
Q 016941 49 NRFLVNDTLFFKYKKGS--------DSVLLVNKDDYDSCNTKKPLLKLDSGDS---EFKLD----------RSGPFYFIS 107 (380)
Q Consensus 49 kTF~VGDTLVFkY~aG~--------HSVveVnK~dYdsCn~snpI~~fSsGnd---vVtLd----------kpG~yYFIC 107 (380)
+++++||+|+.++.+.. |-|.+- ....|.- .+.......|.. .|++. ..|+|||-|
T Consensus 201 Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~-~~~~dG~--~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHs 277 (770)
T 2r7e_B 201 IRAEVEDNIMVTFRNQASRPYSFYSSLISYE-EDQRQGA--EPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSS 277 (770)
T ss_dssp CCCCSSSCEEEEEECCSSSCCCCCBTTCCCC-CCSSSCT--TTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECC
T ss_pred EEEEcCCEEEEEEEECCCCCcceeecccccc-cccCCCC--cCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeec
Confidence 47889999999987743 222221 1111100 000011123332 45666 679999999
Q ss_pred CCCC--cCCCCCeEEEEecCCC
Q 016941 108 GNHD--HCQKGQKLIVVVLHER 127 (380)
Q Consensus 108 GV~g--HCq~GMKLaInV~ass 127 (380)
.+.. |...||.-.|.|....
T Consensus 278 h~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 278 DVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp CSSSSHHHHTSCCEEEEEECST
T ss_pred cCCcHHHHhCCceeeEEECCCc
Confidence 8875 6789998777776543
No 121
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=20.62 E-value=27 Score=29.26 Aligned_cols=13 Identities=15% Similarity=0.294 Sum_probs=10.8
Q ss_pred CeEecCceeeeee
Q 016941 49 NRFLVNDTLFFKY 61 (380)
Q Consensus 49 kTF~VGDTLVFkY 61 (380)
+.+++||+|+|+-
T Consensus 33 ~~i~vGD~I~f~~ 45 (113)
T 1xne_A 33 KDIKRGDKIIFND 45 (113)
T ss_dssp TTCCTTCEEEETT
T ss_pred hccCCCCEEEEcc
Confidence 4789999999953
No 122
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=20.58 E-value=56 Score=26.93 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=23.8
Q ss_pred CCCccCCC-----CCccccc-CCCeEecCceeeeeeecC
Q 016941 32 HGWVTNPG-----ENYNKWS-GRNRFLVNDTLFFKYKKG 64 (380)
Q Consensus 32 ~GWt~~P~-----~nYt~WA-S~kTF~VGDTLVFkY~aG 64 (380)
..|+..+. ..|+.|. ..+++..|+.|.|+|..+
T Consensus 27 g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~dG 65 (104)
T 2laa_A 27 GSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFNDG 65 (104)
T ss_dssp SCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEECS
T ss_pred CCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEeCC
Confidence 46986543 3478895 666777789999999654
No 123
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=20.53 E-value=35 Score=27.37 Aligned_cols=30 Identities=3% Similarity=0.004 Sum_probs=24.1
Q ss_pred EEEecCCCCCccCCCCCcccccCCCeEecCceeeeee
Q 016941 25 KFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKY 61 (380)
Q Consensus 25 tyvVGGs~GWt~~P~~nYt~WAS~kTF~VGDTLVFkY 61 (380)
+.+|||+.| . ..++.|-.. |+.||+|.++.
T Consensus 41 ~~~l~DeTG-~----I~~tlW~~~--l~~Gdvv~i~n 70 (106)
T 2k75_A 41 QGYIEDDTA-R----IRISSFGKQ--LQDSDVVRIDN 70 (106)
T ss_dssp EEEEECSSC-E----EEEEEESSC--CCTTEEEEEEE
T ss_pred EEEEEcCCC-e----EEEEEEcCc--cCCCCEEEEEe
Confidence 578898877 2 457889877 99999999983
Done!