Your job contains 1 sequence.
>016945
MAYYRRAKAALDAFRNLSSKAVPKSPVQESCSRVYSNGSANSAKFSSGFYSYSCISQRLR
NSYCNPNFNTAKRYYYVDRYHVQHFRPRGPRKWLQNPRTVFIVVVIGSGAFITLYLGNLE
TVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRLIAKDIIEALQ
RGLKHETVWSDMGYASTETDFVNEGRAARDTLRALSENSERGKTEGKWHQEDEILDDKWV
QQSRKKGQEKGLQSATSHLDGLNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEI
ATIIGHEVAHAVARHAAEGITKNLWFAILQLILYQFVMPDVVNTMSTLFLRLPFSRKCVS
LFILSNSFWNLWACLLVFVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016945
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165356 - symbol:AT5G51740 species:3702 "Arabi... 1064 1.3e-107 1
SGD|S000001795 - symbol:OMA1 "Metalloendopeptidase of the... 157 5.6e-14 2
ASPGD|ASPL0000044232 - symbol:AN1850 species:162425 "Emer... 127 8.6e-13 2
POMBASE|SPAP14E8.04 - symbol:oma1 "metallopeptidase Oma1 ... 113 9.9e-11 2
CGD|CAL0001997 - symbol:orf19.3827 species:5476 "Candida ... 104 2.2e-09 2
RGD|1304821 - symbol:Oma1 "zinc metallopeptidase homolog ... 103 4.4e-06 2
UNIPROTKB|E1C7A6 - symbol:OMA1 "Uncharacterized protein" ... 106 5.4e-06 2
UNIPROTKB|H7BZX2 - symbol:OMA1 "Metalloendopeptidase OMA1... 102 6.5e-06 2
MGI|MGI:1914263 - symbol:Oma1 "OMA1 homolog, zinc metallo... 102 1.2e-05 2
DICTYBASE|DDB_G0289335 - symbol:DDB_G0289335 "Metalloendo... 117 1.9e-05 2
UNIPROTKB|Q96E52 - symbol:OMA1 "Metalloendopeptidase OMA1... 102 2.6e-05 2
UNIPROTKB|Q9KM08 - symbol:VC_A0581 "Putative uncharacteri... 112 8.9e-05 2
TIGR_CMR|VC_A0581 - symbol:VC_A0581 "lipoprotein, putativ... 112 8.9e-05 2
UNIPROTKB|I3LV41 - symbol:OMA1 "Uncharacterized protein" ... 90 0.00033 2
UNIPROTKB|F1S7A5 - symbol:OMA1 "Uncharacterized protein" ... 90 0.00034 2
UNIPROTKB|Q8EHT0 - symbol:SO_1137 "Zn-dependent peptidase... 105 0.00063 2
TIGR_CMR|SO_1137 - symbol:SO_1137 "conserved hypothetical... 105 0.00063 2
>TAIR|locus:2165356 [details] [associations]
symbol:AT5G51740 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;ISS]
InterPro:IPR001915 Pfam:PF01435 EMBL:CP002688 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 eggNOG:COG0501 EMBL:AK118280
IPI:IPI00530565 RefSeq:NP_199987.2 UniGene:At.9107
ProteinModelPortal:Q8GXE5 SMR:Q8GXE5 STRING:Q8GXE5 MEROPS:M48.A01
PaxDb:Q8GXE5 PRIDE:Q8GXE5 EnsemblPlants:AT5G51740.1 GeneID:835248
KEGG:ath:AT5G51740 OMA:SRRMEIE ProtClustDB:CLSN2680512
Genevestigator:Q8GXE5 Uniprot:Q8GXE5
Length = 442
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 209/367 (56%), Positives = 271/367 (73%)
Query: 1 MAYYRRAKAALDAFR-NLSSKAVPKSPVQESCSRVYSN-GSAN-SAKFSS------GFYS 51
M++YRR K D+ R N++ K +P+S V SR+ + GS+N SAKFSS G S
Sbjct: 1 MSWYRRTKLVFDSLRRNINPKILPRSHVT---SRINNPIGSSNPSAKFSSISSREVGLRS 57
Query: 52 YSCISQRLRNSYCNPNFNTAKRYYYVDRYHVQHFRPRGPRKWLQNPRTVFIVVVIGSGAF 111
++ + + NP + KRYYYVDRY V+HF+PRGP +W QNPRTVF VV++GS
Sbjct: 58 WTSLGRNTNRIAYNPFLSQPKRYYYVDRYQVRHFKPRGPGRWFQNPRTVFTVVLVGSVGL 117
Query: 112 ITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRLI 171
ITL +GN ET+PYTKRTHF+LLSK +E+ LGE+QF+Q+K ++GKILPA HP+S+RVRLI
Sbjct: 118 ITLIVGNTETIPYTKRTHFILLSKPMEKLLGETQFEQIKKTYQGKILPATHPESIRVRLI 177
Query: 172 AKDIIEALQRGLKHETVWSDMGYASTETDFVN-EGRAARDTLRALSENSERGKTEGKWHQ 230
AK++I+ALQRGL +E VWSD+GYASTE+ + ++ A+S E T+ KW +
Sbjct: 178 AKEVIDALQRGLSNERVWSDLGYASTESSLGGGSDKGVKEMEMAMS--GEDTMTDMKWSK 235
Query: 231 EDEILDDKWVQQSRKKGQEKGLQSATSHLDGLNWEVLVVNEPVINAFCLPGGKIVVFTGL 290
ED++LDD+W+Q+SRKK + +ATSHL+G++WEVLVVNEP++NAFCLP GKIVVFTGL
Sbjct: 236 EDQVLDDQWIQKSRKKDSKA--HAATSHLEGISWEVLVVNEPIVNAFCLPAGKIVVFTGL 293
Query: 291 LEHFRTDAEIATIIGXXXXXXXXXXXXXGITKNLWFAILQLILYQFVMPDVVNTMSTLFL 350
L HF++DAE+AT+IG GITKNLWFAILQL+LYQFVMPD+VNTMS LFL
Sbjct: 294 LNHFKSDAEVATVIGHEVGHAVARHVAEGITKNLWFAILQLVLYQFVMPDLVNTMSALFL 353
Query: 351 RLPFSRK 357
RLPFSRK
Sbjct: 354 RLPFSRK 360
>SGD|S000001795 [details] [associations]
symbol:OMA1 "Metalloendopeptidase of the mitochondrial inner
membrane" species:4932 "Saccharomyces cerevisiae" [GO:0004222
"metalloendopeptidase activity" evidence=IEA;ISS;IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001915 Pfam:PF01435 PROSITE:PS00142
SGD:S000001795 GO:GO:0016021 GO:GO:0005743 GO:GO:0046872
GO:GO:0004222 EMBL:BK006944 GO:GO:0006515 EMBL:Z27116
eggNOG:COG0501 GeneTree:ENSGT00390000007027 MEROPS:M48.018
HOGENOM:HOG000266075 OMA:PASREME OrthoDB:EOG40GH1B EMBL:Z28312
PIR:S38165 RefSeq:NP_013013.2 ProteinModelPortal:P36163 SMR:P36163
DIP:DIP-5087N MINT:MINT-544282 STRING:P36163 EnsemblFungi:YKR087C
GeneID:853962 KEGG:sce:YKR087C CYGD:YKR087c NextBio:975389
Genevestigator:P36163 GermOnline:YKR087C Uniprot:P36163
Length = 345
Score = 157 (60.3 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 257 SHLDGLNWEVLVVNEPVI--NAFCLPGGKIVVFTGLLEHFRTDAEIATIIGXXXXXXXXX 314
S LDG+ WE+ VVN+P NAF LPGGK+ +F+ +L D IAT++
Sbjct: 152 SLLDGIKWEIHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQLAR 211
Query: 315 XXXXGITKNLWFAILQLILYQFVMPDVVNT-MSTLFLRLPFSRK 357
++K +++L L+LY +N + FLR+P SR+
Sbjct: 212 HTAENLSKAPIYSLLGLVLYTVTGAHAINNILLDGFLRMPASRQ 255
Score = 89 (36.4 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 109 GAFITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRV 168
G Y +L+ P + R+ F+ +S+ +E +G ++ + + +ILP HP S+++
Sbjct: 73 GGCSLFYYTHLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKI 132
Query: 169 RLIAKDIIEA 178
I I+EA
Sbjct: 133 ENIFMKIVEA 142
>ASPGD|ASPL0000044232 [details] [associations]
symbol:AN1850 species:162425 "Emericella nidulans"
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020
EMBL:BN001307 GO:GO:0006508 GO:GO:0004222 EMBL:AACD01000029
eggNOG:COG0501 MEROPS:M48.018 HOGENOM:HOG000266075 OMA:PASREME
OrthoDB:EOG40GH1B RefSeq:XP_659454.1 ProteinModelPortal:Q5BC80
STRING:Q5BC80 EnsemblFungi:CADANIAT00008501 GeneID:2875739
KEGG:ani:AN1850.2 Uniprot:Q5BC80
Length = 376
Score = 127 (49.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 259 LDGLNWEVLVVNEP-VINAFCLPGGKIVVFTGLLEHFRTDAEIATIIGXXXXXXXXXXXX 317
+DG +W+V V+ + ++NAF LPGGK+ VFTG+L + + +A ++G
Sbjct: 186 IDGADWKVHVIKDDNMVNAFVLPGGKVFVFTGILPICKDEDGLAAVLGHEIAHVVAHHTG 245
Query: 318 XGITKNLWFAILQLILYQFVMPDVVNTMSTLFLRLPFS 355
++ N F + +I ++ D+ + +L L L +S
Sbjct: 246 ERMSNN--FVTMGVIFLAALLFDISGNIPSLLLNLMYS 281
Score = 113 (44.8 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 23 PKSPVQESCSRVYSNGSANSAKFSS---GFYSYSC-ISQRLRNSYCNPNFNTAKRYYYVD 78
P+ + +S R S + S+K + F SYS + + ++ +++ R++Y
Sbjct: 22 PRPCISKSTFRCSSRSALASSKRTQPPRSFISYSRPVPRAFPQAHARSFSSSSHRHFYNG 81
Query: 79 RYHVQHFRPRGPRKW----LQNPRTVFIVVVIGSGAFITLYLGNLETVPYTKRTHFVLLS 134
+ F G + LQ R + V+V G +Y+ N +TV T R F +S
Sbjct: 82 GNRYRRFDGPGRQPLIVHLLQKARPIHFVMV--GGVIGGVYVYNTDTVEMTGRRRFNCVS 139
Query: 135 KAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRLIAKDII 176
E ++GE ++++ +G+ILP HP ++ V + ++
Sbjct: 140 HQQELKMGEQSYREVLRDCQGRILPEYHPLTIMVNRVLHRLV 181
>POMBASE|SPAP14E8.04 [details] [associations]
symbol:oma1 "metallopeptidase Oma1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001915 Pfam:PF01435
PROSITE:PS00142 PomBase:SPAP14E8.04 GO:GO:0016021 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0004222
GO:GO:0006515 eggNOG:COG0501 RefSeq:NP_593540.1
ProteinModelPortal:Q9P7G4 STRING:Q9P7G4 MEROPS:M48.018
EnsemblFungi:SPAP14E8.04.1 GeneID:2541915 KEGG:spo:SPAP14E8.04
HOGENOM:HOG000266075 OMA:PASREME OrthoDB:EOG40GH1B NextBio:20803002
Uniprot:Q9P7G4
Length = 337
Score = 113 (44.8 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 31/107 (28%), Positives = 47/107 (43%)
Query: 255 ATSHLDGLNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIGXXXXXXXXX 314
A S + L WE+ V+ +P NAF LPGGK+ VF G+L + + +A ++
Sbjct: 144 AVSGMSDLKWELHVIRDPTPNAFVLPGGKVFVFEGILPMCKGEDGLAAVLAHETAHQVAR 203
Query: 315 XXXXGITKNLWFAILQLILYQFVMPDVVNTMSTLFLR----LPFSRK 357
I A+ ++ D+ +S L LPFSRK
Sbjct: 204 HSAEKIAFTR--AVSCIVFLAAASLDLSGQLSHFLLNFGLLLPFSRK 248
Score = 107 (42.7 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 36/147 (24%), Positives = 69/147 (46%)
Query: 32 SRVYSNGSANSAKFSSGFYSYSCISQRLRNSYCNPNFNTAKRYYYVDRYHVQH--FRPRG 89
++ SN S A + SY S R N F + + +R V + F+P
Sbjct: 4 NKYISNYSRTRAVSCAPVLSYKKCSYRNFNGLLQARFQS-NNLSWSNRNRVVYKSFQPN- 61
Query: 90 PRKWLQNPRTVFIVVVIGSGAFITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQM 149
PR + + +F ++ G G + Y +LE VP + R F +S E+++ + ++++
Sbjct: 62 PRD--KRFQWIFGALIAGGGVY---YFTHLEYVPISNRRRFNDVSLDFEKRMAQDAYKEV 116
Query: 150 KAAFKGKILPAIHPDSVRVRLIAKDII 176
+ + ++LP+ HP ++ V + K II
Sbjct: 117 MSEYGDRMLPSYHPTTLYVSRVLKRII 143
>CGD|CAL0001997 [details] [associations]
symbol:orf19.3827 species:5476 "Candida albicans" [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR001915 Pfam:PF01435 CGD:CAL0001997
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AACQ01000057
EMBL:AACQ01000056 eggNOG:COG0501 RefSeq:XP_717231.1
RefSeq:XP_717307.1 ProteinModelPortal:Q5A663 STRING:Q5A663
GeneID:3641086 GeneID:3641106 KEGG:cal:CaO19.11308
KEGG:cal:CaO19.3827 Uniprot:Q5A663
Length = 336
Score = 104 (41.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 257 SHLDGLNWEVLVVNEPVI--NAFCLPGGKIVVFTGLLEHFRTDAEIATIIGXXXXXXXXX 314
+HL L WE+ ++ + NAF LP GKI +F+ ++ + + +AT++
Sbjct: 134 NHLKSLKWEINIIQNDSLPPNAFILPNGKIFIFSSIMPICKNEDGLATVLSHELSHQLAQ 193
Query: 315 XXXXGITKNLWFAILQLILY 334
++K + +L ILY
Sbjct: 194 HSSEQLSKQPIYMVLSTILY 213
Score = 104 (41.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 94 LQNPRTVFIVVVIGSGAFITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAF 153
L N +T++I G + Y+ NL PYT R+ F+ + +E ++G+ ++Q+ F
Sbjct: 39 LTNRKTLYI-----GGGLLGFYVYNLHDAPYTHRSRFIWVPYWLETKIGDYSYRQIYQQF 93
Query: 154 KGKILPAIHPDSVRVRLIAKDIIE 177
+ +ILP +P RV I +++
Sbjct: 94 QSQILPHSNPLYNRVSTIMNKLLD 117
>RGD|1304821 [details] [associations]
symbol:Oma1 "zinc metallopeptidase homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0002024 "diet induced
thermogenesis" evidence=ISO;ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISO;ISS] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006006 "glucose metabolic process"
evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0006629 "lipid metabolic process" evidence=ISO;ISS] [GO:0006950
"response to stress" evidence=ISO;ISS] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0010637 "negative regulation of
mitochondrial fusion" evidence=ISO;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031966 "mitochondrial membrane"
evidence=ISO;ISS] [GO:0034982 "mitochondrial protein processing"
evidence=IEA;ISO] [GO:0042407 "cristae formation" evidence=IEA;ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=ISO;ISS] InterPro:IPR001915 Pfam:PF01435
RGD:1304821 GO:GO:0016021 GO:GO:0006950 GO:GO:0005743 GO:GO:0031966
GO:GO:0046872 GO:GO:0006629 GO:GO:0004222 GO:GO:0006006
GO:GO:0002024 GO:GO:0006515 GO:GO:0042407 GO:GO:0034982
GO:GO:0010637 CTD:115209 GeneTree:ENSGT00390000007027 OMA:QKQEQIP
OrthoDB:EOG40GCQM GO:GO:0097009 EMBL:CH473998 IPI:IPI00192197
RefSeq:NP_001100139.1 UniGene:Rn.14712 ProteinModelPortal:D3ZS74
Ensembl:ENSRNOT00000009516 GeneID:298282 KEGG:rno:298282
UCSC:RGD:1304821 NextBio:643392 Uniprot:D3ZS74
Length = 504
Score = 103 (41.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 262 LNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+NW V VV+ P +NAF LP G++ VFTGLL +++ ++G
Sbjct: 262 INWVVHVVHSPKVNAFVLPNGQVFVFTGLLNSVTDMHQLSFLLG 305
Score = 78 (32.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRL 170
F+ Y +LE P T R+ +L+ K R L + +++ FK +LP P + V+
Sbjct: 185 FVVFYFTHLEVSPVTGRSKLLLVGKEHFRLLSDLEYEVWMEEFKNDLLPEEDPRYLTVKK 244
Query: 171 IAKDIIEALQ 180
+ + + Q
Sbjct: 245 VVYHLTQCNQ 254
>UNIPROTKB|E1C7A6 [details] [associations]
symbol:OMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002024 "diet induced thermogenesis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0010637
"negative regulation of mitochondrial fusion" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0042407
"cristae formation" evidence=IEA] [GO:0097009 "energy homeostasis"
evidence=IEA] InterPro:IPR001915 Pfam:PF01435 GO:GO:0006950
GO:GO:0031966 GO:GO:0006629 GO:GO:0004222 GO:GO:0006006
GO:GO:0006515 GO:GO:0042407 GO:GO:0034982 GO:GO:0010637
GeneTree:ENSGT00390000007027 OMA:QKQEQIP EMBL:AADN02012509
IPI:IPI00577617 Ensembl:ENSGALT00000017659 Uniprot:E1C7A6
Length = 468
Score = 106 (42.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 259 LDGLNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+ L W + VV+EP +NAF LP G++ VFTGLL +++ I+G
Sbjct: 237 VSALTWAIHVVDEPEVNAFVLPNGEVFVFTGLLNAVSDIHQLSFILG 283
Score = 73 (30.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILP 159
F+ Y +LE P T R ++ K RQL + ++ ++ K+LP
Sbjct: 163 FVVFYFTHLEETPITGRARLLVFGKEHLRQLSQVEYSMWMEKYESKMLP 211
>UNIPROTKB|H7BZX2 [details] [associations]
symbol:OMA1 "Metalloendopeptidase OMA1, mitochondrial"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001915
Pfam:PF01435 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AL365187 EMBL:AL109845 HGNC:HGNC:29661 PRIDE:H7BZX2
Ensembl:ENST00000421528 Uniprot:H7BZX2
Length = 328
Score = 102 (41.0 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 262 LNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+NW + VV+ P+INAF LP G++ VFTG L +++ ++G
Sbjct: 125 INWVIHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFLLG 168
Score = 72 (30.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRL 170
F+ Y +LE P T R+ +LL K R L E +++ FK +L + V+
Sbjct: 48 FVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKE 107
Query: 171 IAKDIIE 177
+ +IE
Sbjct: 108 VLCHLIE 114
>MGI|MGI:1914263 [details] [associations]
symbol:Oma1 "OMA1 homolog, zinc metallopeptidase (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0002024 "diet induced
thermogenesis" evidence=ISO] [GO:0004222 "metalloendopeptidase
activity" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=ISO] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006629
"lipid metabolic process" evidence=ISO] [GO:0006950 "response to
stress" evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0010637
"negative regulation of mitochondrial fusion" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=ISO]
[GO:0034982 "mitochondrial protein processing" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097009 "energy homeostasis"
evidence=ISO] InterPro:IPR001915 Pfam:PF01435 PROSITE:PS00142
MGI:MGI:1914263 GO:GO:0016021 GO:GO:0005739 GO:GO:0006950
GO:GO:0005743 GO:GO:0046872 GO:GO:0006629 GO:GO:0004222
GO:GO:0006006 GO:GO:0002024 GO:GO:0006515 GO:GO:0042407
GO:GO:0034982 GO:GO:0010637 EMBL:AL772338 eggNOG:COG0501
MEROPS:M48.017 CTD:115209 GeneTree:ENSGT00390000007027
HOGENOM:HOG000115266 HOVERGEN:HBG096685 OMA:QKQEQIP
OrthoDB:EOG40GCQM GO:GO:0097009 EMBL:AK008020 EMBL:AK076209
EMBL:AK136208 EMBL:BC016238 IPI:IPI00111512 IPI:IPI00856688
RefSeq:NP_080185.1 UniGene:Mm.30021 ProteinModelPortal:Q9D8H7
SMR:Q9D8H7 STRING:Q9D8H7 PhosphoSite:Q9D8H7 PaxDb:Q9D8H7
PRIDE:Q9D8H7 Ensembl:ENSMUST00000035780 GeneID:67013 KEGG:mmu:67013
UCSC:uc008txq.1 UCSC:uc012dht.1 InParanoid:Q9D8H7 NextBio:323306
Bgee:Q9D8H7 Genevestigator:Q9D8H7 Uniprot:Q9D8H7
Length = 521
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 263 NWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
NW V VV+ P +NAF LP G++ +FTGLL +++ ++G
Sbjct: 280 NWVVHVVDSPAVNAFVLPNGQVFIFTGLLNSVTDVHQLSFLLG 322
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVR 169
F+ Y +LE P T R+ +L+ K R L + +++ FK +LP P + V+
Sbjct: 202 FVVFYFTHLEVSPVTGRSKLLLVGKEHFRLLSDLEYEVWMEEFKNDLLPERDPRYLTVK 260
>DICTYBASE|DDB_G0289335 [details] [associations]
symbol:DDB_G0289335 "Metalloendopeptidase OMA1,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR001915 Pfam:PF01435 dictyBase:DDB_G0289335
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AAFI02000139
eggNOG:COG0501 RefSeq:XP_636264.1 ProteinModelPortal:Q54HN7
EnsemblProtists:DDB0188368 GeneID:8627083 KEGG:ddi:DDB_G0289335
InParanoid:Q54HN7 Uniprot:Q54HN7
Length = 687
Score = 117 (46.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 41/142 (28%), Positives = 61/142 (42%)
Query: 220 ERGKTEGKWHQEDEILDDKWVQQSRKKGQEKGLQSATSHLDGLNWEVLVVNEPVINAFCL 279
E G E K D L + Q+R + K + T D L WE VVN V+NA L
Sbjct: 397 EMGYEEMKTQLSDYFLPENNALQNRVREVAKRIIDVTDRPD-LAWECHVVNSEVVNACVL 455
Query: 280 PGGKIVVFTGLLEHFRTDAEIATIIGXXXXXXXXXXXXXGIT-KNLWFAILQLILYQFVM 338
P GKI VF+ L + ++ E+A++I ++ L + L L V
Sbjct: 456 PNGKIFVFSKLFDICESEDELASVISHEIGHAVARHAAEHLSISKLGYMFLTLTR-GLVG 514
Query: 339 PDVVNTMSTLF----LRLPFSR 356
+ ++T+F L L +SR
Sbjct: 515 ETITGNLTTMFSANLLNLRYSR 536
Score = 60 (26.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 45 FSSGFYSYSCISQRLRNSYCNPNFNTAKRYYYVDRYHVQHF 85
F S FY++S ++R N N NT +R D +H QH+
Sbjct: 131 FRSHFYNHS--NRRYYNRANKCNDNTQRRQQQYDYHHHQHY 169
>UNIPROTKB|Q96E52 [details] [associations]
symbol:OMA1 "Metalloendopeptidase OMA1, mitochondrial"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0034982 "mitochondrial protein processing" evidence=IEA]
[GO:0042407 "cristae formation" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IDA] [GO:0006950 "response to
stress" evidence=IDA] [GO:0004222 "metalloendopeptidase activity"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0010637 "negative
regulation of mitochondrial fusion" evidence=IMP] [GO:0006629
"lipid metabolic process" evidence=IMP] [GO:0006006 "glucose
metabolic process" evidence=IMP] [GO:0097009 "energy homeostasis"
evidence=IMP] [GO:0002024 "diet induced thermogenesis"
evidence=IMP] InterPro:IPR001915 Pfam:PF01435 PROSITE:PS00142
GO:GO:0016021 GO:GO:0006950 GO:GO:0005743 GO:GO:0031966
GO:GO:0046872 EMBL:CH471059 GO:GO:0006629 GO:GO:0004222
GO:GO:0006006 GO:GO:0002024 GO:GO:0006515 GO:GO:0042407
GO:GO:0034982 GO:GO:0010637 eggNOG:COG0501 MEROPS:M48.017
CTD:115209 HOVERGEN:HBG096685 OMA:QKQEQIP GO:GO:0097009
EMBL:AB048348 EMBL:AL365187 EMBL:AL109845 EMBL:BC012915
EMBL:AK091101 IPI:IPI00061229 IPI:IPI00168213 RefSeq:NP_660286.1
UniGene:Hs.425769 ProteinModelPortal:Q96E52 SMR:Q96E52
STRING:Q96E52 PhosphoSite:Q96E52 DMDM:74751828 PRIDE:Q96E52
DNASU:115209 Ensembl:ENST00000358603 Ensembl:ENST00000371226
Ensembl:ENST00000419242 Ensembl:ENST00000426139
Ensembl:ENST00000453710 Ensembl:ENST00000456980 GeneID:115209
KEGG:hsa:115209 UCSC:uc001cyx.1 UCSC:uc001cyy.3
GeneCards:GC01M058881 H-InvDB:HIX0077405 HGNC:HGNC:29661
neXtProt:NX_Q96E52 PharmGKB:PA134911478 InParanoid:Q96E52
PhylomeDB:Q96E52 GenomeRNAi:115209 NextBio:79540 Bgee:Q96E52
CleanEx:HS_OMA1 Genevestigator:Q96E52 Uniprot:Q96E52
Length = 524
Score = 102 (41.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 262 LNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+NW + VV+ P+INAF LP G++ VFTG L +++ ++G
Sbjct: 283 INWVIHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFLLG 326
Score = 72 (30.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRL 170
F+ Y +LE P T R+ +LL K R L E +++ FK +L + V+
Sbjct: 206 FVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKE 265
Query: 171 IAKDIIE 177
+ +IE
Sbjct: 266 VLCHLIE 272
>UNIPROTKB|Q9KM08 [details] [associations]
symbol:VC_A0581 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 EMBL:AE003853 GenomeReviews:AE003853_GR
MEROPS:M48.018 OMA:GRTQESE PIR:D82441 RefSeq:NP_232971.1
ProteinModelPortal:Q9KM08 DNASU:2612413 GeneID:2612413
KEGG:vch:VCA0581 PATRIC:20085716 ProtClustDB:CLSK869667
Uniprot:Q9KM08
Length = 263
Score = 112 (44.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 264 WEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
WEV+V +NAF LPGGKI V+TGLL+ ++AT+IG
Sbjct: 84 WEVVVFESDQVNAFALPGGKIGVYTGLLKVAVNQDQLATVIG 125
Score = 46 (21.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 112 ITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMK 150
+TL L P T R +L S QLG F QMK
Sbjct: 12 MTLGLAACSASP-TGRNQLLLFSDNDMSQLGAKSFTQMK 49
>TIGR_CMR|VC_A0581 [details] [associations]
symbol:VC_A0581 "lipoprotein, putative" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001915
Pfam:PF01435 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE003853 GenomeReviews:AE003853_GR MEROPS:M48.018 OMA:GRTQESE
PIR:D82441 RefSeq:NP_232971.1 ProteinModelPortal:Q9KM08
DNASU:2612413 GeneID:2612413 KEGG:vch:VCA0581 PATRIC:20085716
ProtClustDB:CLSK869667 Uniprot:Q9KM08
Length = 263
Score = 112 (44.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 264 WEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
WEV+V +NAF LPGGKI V+TGLL+ ++AT+IG
Sbjct: 84 WEVVVFESDQVNAFALPGGKIGVYTGLLKVAVNQDQLATVIG 125
Score = 46 (21.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 112 ITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMK 150
+TL L P T R +L S QLG F QMK
Sbjct: 12 MTLGLAACSASP-TGRNQLLLFSDNDMSQLGAKSFTQMK 49
>UNIPROTKB|I3LV41 [details] [associations]
symbol:OMA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] InterPro:IPR001915 Pfam:PF01435
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00390000007027 EMBL:FP476008
Ensembl:ENSSSCT00000032143 Uniprot:I3LV41
Length = 522
Score = 90 (36.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 262 LNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+NW + VV+ INAF LP G++ +FTGLL +++ ++G
Sbjct: 285 INWVIHVVDSSDINAFVLPNGQVFLFTGLLNSVTDIHQLSFLMG 328
Score = 74 (31.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRL 170
F+ Y +LE P T R+ +LL K R L E +++ FK +L + V+
Sbjct: 208 FVVFYFTHLEVSPVTGRSKLLLLGKEHFRLLSELEYEAWMEEFKNDMLTEKDARYLTVKE 267
Query: 171 IAKDIIE 177
+ +IE
Sbjct: 268 VVHHLIE 274
>UNIPROTKB|F1S7A5 [details] [associations]
symbol:OMA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097009 "energy homeostasis" evidence=IEA] [GO:0042407
"cristae formation" evidence=IEA] [GO:0034982 "mitochondrial
protein processing" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0010637 "negative regulation of
mitochondrial fusion" evidence=IEA] [GO:0006950 "response to
stress" evidence=IEA] [GO:0006629 "lipid metabolic process"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0002024 "diet induced thermogenesis"
evidence=IEA] InterPro:IPR001915 Pfam:PF01435 GO:GO:0006950
GO:GO:0031966 GO:GO:0006629 GO:GO:0004222 GO:GO:0006006
GO:GO:0002024 GO:GO:0006515 GO:GO:0042407 GO:GO:0034982
GO:GO:0010637 GeneTree:ENSGT00390000007027 OMA:QKQEQIP
GO:GO:0097009 EMBL:FP476008 Ensembl:ENSSSCT00000004240
Uniprot:F1S7A5
Length = 527
Score = 90 (36.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 262 LNWEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
+NW + VV+ INAF LP G++ +FTGLL +++ ++G
Sbjct: 285 INWVIHVVDSSDINAFVLPNGQVFLFTGLLNSVTDIHQLSFLMG 328
Score = 74 (31.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 111 FITLYLGNLETVPYTKRTHFVLLSKAVERQLGESQFQQMKAAFKGKILPAIHPDSVRVRL 170
F+ Y +LE P T R+ +LL K R L E +++ FK +L + V+
Sbjct: 208 FVVFYFTHLEVSPVTGRSKLLLLGKEHFRLLSELEYEAWMEEFKNDMLTEKDARYLTVKE 267
Query: 171 IAKDIIE 177
+ +IE
Sbjct: 268 VVHHLIE 274
>UNIPROTKB|Q8EHT0 [details] [associations]
symbol:SO_1137 "Zn-dependent peptidase M48 family"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE014299 GenomeReviews:AE014299_GR
MEROPS:M48.018 HOGENOM:HOG000266075 RefSeq:NP_716762.1
ProteinModelPortal:Q8EHT0 GeneID:1168968 KEGG:son:SO_1137
PATRIC:23521914 OMA:GRTQESE ProtClustDB:CLSK906107 Uniprot:Q8EHT0
Length = 269
Score = 105 (42.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 264 WEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
W+V++ + +NAF LPGG I V+TGLL+ T ++AT++G
Sbjct: 85 WDVVLFDSEQVNAFALPGGHIGVYTGLLKVASTPDQLATVLG 126
Score = 46 (21.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 125 TKRTHFVLLSKAVERQLGESQFQQMK 150
T R+ +L S + +Q+G++ F +MK
Sbjct: 27 TGRSQTLLYSSSQMQQMGDASFAEMK 52
>TIGR_CMR|SO_1137 [details] [associations]
symbol:SO_1137 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE014299 GenomeReviews:AE014299_GR
MEROPS:M48.018 HOGENOM:HOG000266075 RefSeq:NP_716762.1
ProteinModelPortal:Q8EHT0 GeneID:1168968 KEGG:son:SO_1137
PATRIC:23521914 OMA:GRTQESE ProtClustDB:CLSK906107 Uniprot:Q8EHT0
Length = 269
Score = 105 (42.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 264 WEVLVVNEPVINAFCLPGGKIVVFTGLLEHFRTDAEIATIIG 305
W+V++ + +NAF LPGG I V+TGLL+ T ++AT++G
Sbjct: 85 WDVVLFDSEQVNAFALPGGHIGVYTGLLKVASTPDQLATVLG 126
Score = 46 (21.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 125 TKRTHFVLLSKAVERQLGESQFQQMK 150
T R+ +L S + +Q+G++ F +MK
Sbjct: 27 TGRSQTLLYSSSQMQQMGDASFAEMK 52
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 367 0.00084 117 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 619 (66 KB)
Total size of DFA: 260 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.25u 0.13s 33.38t Elapsed: 00:00:02
Total cpu time: 33.26u 0.13s 33.39t Elapsed: 00:00:02
Start: Tue May 21 03:05:43 2013 End: Tue May 21 03:05:45 2013