Query 016948
Match_columns 380
No_of_seqs 194 out of 1353
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:26:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gjz_A Lysine-specific demethy 100.0 2.6E-49 8.9E-54 365.7 17.3 233 20-314 1-235 (235)
2 3al5_A HTYW5, JMJC domain-cont 100.0 1.4E-43 4.8E-48 346.7 16.1 234 19-316 28-276 (338)
3 3d8c_A Hypoxia-inducible facto 100.0 9.6E-44 3.3E-48 349.1 13.3 264 9-318 30-302 (349)
4 3k2o_A Bifunctional arginine d 100.0 5E-41 1.7E-45 327.0 17.1 237 18-320 43-296 (336)
5 2yu1_A JMJC domain-containing 100.0 5.3E-33 1.8E-37 278.4 11.9 226 19-317 51-305 (451)
6 3k3o_A PHF8, PHD finger protei 100.0 2.2E-30 7.6E-35 252.5 10.0 236 10-317 6-256 (371)
7 1vrb_A Putative asparaginyl hy 100.0 3.1E-29 1E-33 245.2 15.1 233 27-331 26-268 (342)
8 3pua_A GRC5, PHD finger protei 100.0 2.8E-29 9.7E-34 246.1 13.0 218 29-317 49-283 (392)
9 3kv5_D JMJC domain-containing 100.0 5.1E-29 1.8E-33 252.7 11.7 216 21-316 137-372 (488)
10 3kv9_A JMJC domain-containing 100.0 7.5E-29 2.6E-33 243.7 12.4 234 10-316 34-283 (397)
11 3kv4_A PHD finger protein 8; e 100.0 5.2E-28 1.8E-32 242.0 14.2 212 29-316 106-339 (447)
12 2xdv_A MYC-induced nuclear ant 99.8 3.6E-21 1.2E-25 193.4 10.1 196 27-300 24-223 (442)
13 4diq_A Lysine-specific demethy 99.8 7.8E-20 2.7E-24 183.6 17.2 104 163-311 159-263 (489)
14 3pur_A Lysine-specific demethy 99.8 2E-18 6.8E-23 173.7 15.6 215 29-316 151-404 (528)
15 2ypd_A Probable JMJC domain-co 99.4 1.3E-13 4.6E-18 133.3 5.7 243 31-323 24-336 (392)
16 2xxz_A Lysine-specific demethy 98.0 2.5E-05 8.7E-10 74.8 9.5 109 169-311 201-312 (332)
17 3dxt_A JMJC domain-containing 97.7 3.6E-05 1.2E-09 74.2 5.2 115 169-312 176-296 (354)
18 4ask_A Lysine-specific demethy 97.6 0.00019 6.3E-09 72.0 9.5 110 169-312 235-347 (510)
19 3avr_A Lysine-specific demethy 97.5 0.00032 1.1E-08 71.2 10.5 110 169-312 260-372 (531)
20 3opt_A DNA damage-responsive t 97.4 0.00012 4E-09 71.1 5.5 114 169-311 219-338 (373)
21 2ox0_A JMJC domain-containing 97.1 0.00043 1.5E-08 67.5 5.3 115 169-312 194-314 (381)
22 2fqp_A Hypothetical protein BP 95.2 0.056 1.9E-06 41.6 7.1 26 276-301 59-84 (97)
23 2gm6_A Cysteine dioxygenase ty 95.1 0.086 2.9E-06 47.2 9.1 83 172-313 82-166 (208)
24 1fxz_A Glycinin G1; proglycini 95.0 0.059 2E-06 54.3 8.6 25 275-299 382-406 (476)
25 1x82_A Glucose-6-phosphate iso 94.7 0.18 6.3E-06 44.1 10.1 37 275-313 118-154 (190)
26 1dgw_A Canavalin; duplicated s 94.7 0.061 2.1E-06 46.7 6.8 25 277-301 84-108 (178)
27 3c3v_A Arachin ARAH3 isoform; 94.7 0.064 2.2E-06 54.4 7.7 25 275-299 416-440 (510)
28 3h8u_A Uncharacterized conserv 94.6 0.19 6.4E-06 40.2 9.1 25 277-301 80-104 (125)
29 2e9q_A 11S globulin subunit be 94.6 0.062 2.1E-06 53.9 7.3 64 172-299 326-390 (459)
30 1fi2_A Oxalate oxidase, germin 94.5 0.13 4.5E-06 45.4 8.7 35 276-312 119-153 (201)
31 3nw4_A Gentisate 1,2-dioxygena 94.5 0.074 2.5E-06 51.7 7.3 27 275-301 141-167 (368)
32 2vqa_A SLL1358 protein, MNCA; 94.3 0.12 4E-06 49.7 8.6 24 278-301 98-121 (361)
33 3bu7_A Gentisate 1,2-dioxygena 94.3 0.14 4.8E-06 50.2 9.1 26 275-300 331-356 (394)
34 3kgz_A Cupin 2 conserved barre 94.3 0.18 6.1E-06 42.8 8.7 25 277-301 83-107 (156)
35 3ibm_A Cupin 2, conserved barr 94.3 0.35 1.2E-05 41.4 10.6 24 277-300 95-118 (167)
36 3st7_A Capsular polysaccharide 94.2 0.14 4.8E-06 48.9 8.8 35 171-205 274-309 (369)
37 1lr5_A Auxin binding protein 1 94.1 0.44 1.5E-05 40.1 10.9 26 275-300 87-112 (163)
38 3fz3_A Prunin; TREE NUT allerg 94.1 0.091 3.1E-06 53.3 7.2 65 171-299 397-462 (531)
39 2b8m_A Hypothetical protein MJ 93.9 0.29 1E-05 38.6 8.8 23 279-301 69-91 (117)
40 4e2g_A Cupin 2 conserved barre 93.7 0.36 1.2E-05 38.5 9.1 24 277-300 80-103 (126)
41 2gu9_A Tetracenomycin polyketi 93.7 0.44 1.5E-05 36.8 9.3 25 277-301 63-87 (113)
42 2vqa_A SLL1358 protein, MNCA; 93.6 0.2 6.9E-06 48.0 8.6 26 276-301 278-303 (361)
43 3uss_A Putative uncharacterize 93.6 0.33 1.1E-05 43.5 9.3 85 171-314 75-161 (211)
44 3lag_A Uncharacterized protein 93.5 0.068 2.3E-06 41.7 4.1 25 277-301 60-84 (98)
45 4i4a_A Similar to unknown prot 93.4 0.4 1.4E-05 38.3 8.8 37 277-315 73-109 (128)
46 3jzv_A Uncharacterized protein 93.3 0.33 1.1E-05 41.6 8.6 25 277-301 92-116 (166)
47 3ksc_A LEGA class, prolegumin; 93.1 0.26 9E-06 49.7 8.8 66 171-300 361-427 (496)
48 2oa2_A BH2720 protein; 1017534 93.1 0.14 4.7E-06 42.7 5.7 27 275-301 87-113 (148)
49 3kgl_A Cruciferin; 11S SEED gl 92.8 0.28 9.5E-06 49.1 8.4 64 171-298 326-390 (466)
50 2o8q_A Hypothetical protein; c 92.8 0.29 1E-05 39.6 7.2 25 277-301 84-108 (134)
51 2d5f_A Glycinin A3B4 subunit; 92.6 0.21 7.1E-06 50.5 7.3 24 276-299 412-435 (493)
52 3eqe_A Putative cystein deoxyg 92.6 0.65 2.2E-05 40.1 9.4 37 276-314 117-153 (171)
53 3ejk_A DTDP sugar isomerase; Y 92.5 0.56 1.9E-05 40.6 8.9 75 169-301 53-131 (174)
54 1zvf_A 3-hydroxyanthranilate 3 92.5 0.43 1.5E-05 41.2 8.0 71 169-300 34-104 (176)
55 1v70_A Probable antibiotics sy 92.4 0.19 6.4E-06 38.2 5.3 25 277-301 68-92 (105)
56 3fjs_A Uncharacterized protein 92.4 0.53 1.8E-05 37.3 8.2 24 277-300 75-98 (114)
57 1yhf_A Hypothetical protein SP 92.4 0.55 1.9E-05 36.6 8.1 24 277-300 79-102 (115)
58 3lwc_A Uncharacterized protein 92.3 0.5 1.7E-05 38.0 8.0 23 277-299 78-100 (119)
59 3bu7_A Gentisate 1,2-dioxygena 92.3 0.51 1.8E-05 46.2 9.3 26 276-301 162-188 (394)
60 4b29_A Dimethylsulfoniopropion 92.1 0.56 1.9E-05 42.1 8.6 36 278-316 173-208 (217)
61 2y0o_A Probable D-lyxose ketol 92.1 0.57 2E-05 40.6 8.4 27 273-299 116-142 (175)
62 2d40_A Z3393, putative gentisa 92.0 0.37 1.3E-05 46.5 7.9 24 276-299 306-329 (354)
63 2d40_A Z3393, putative gentisa 92.0 0.22 7.5E-06 48.1 6.3 26 276-301 139-164 (354)
64 2opk_A Hypothetical protein; p 91.9 0.18 6.2E-06 40.0 4.7 24 278-301 75-98 (112)
65 1o4t_A Putative oxalate decarb 91.8 0.2 7E-06 40.9 5.0 26 276-301 96-121 (133)
66 1uij_A Beta subunit of beta co 91.7 0.28 9.6E-06 48.5 6.8 23 278-300 93-115 (416)
67 3l2h_A Putative sugar phosphat 91.6 1.6 5.4E-05 36.5 10.7 25 277-301 87-112 (162)
68 2pfw_A Cupin 2, conserved barr 91.6 1.3 4.4E-05 34.5 9.5 24 277-300 73-96 (116)
69 3qac_A 11S globulin SEED stora 91.5 0.34 1.2E-05 48.5 7.2 63 173-299 328-391 (465)
70 1j58_A YVRK protein; cupin, de 91.5 0.33 1.1E-05 47.0 7.1 24 277-300 123-146 (385)
71 2f4p_A Hypothetical protein TM 91.3 1.1 3.8E-05 37.1 9.3 24 278-301 89-112 (147)
72 3i7d_A Sugar phosphate isomera 91.2 1.2 4E-05 37.7 9.5 25 277-301 84-110 (163)
73 1j58_A YVRK protein; cupin, de 91.2 0.42 1.4E-05 46.2 7.4 26 276-301 301-326 (385)
74 3eln_A Cysteine dioxygenase ty 91.2 1.8 6.1E-05 38.3 10.9 81 177-315 78-160 (200)
75 2ea7_A 7S globulin-1; beta bar 91.2 0.36 1.2E-05 48.0 6.9 24 277-300 104-127 (434)
76 2ozj_A Cupin 2, conserved barr 91.0 1.6 5.6E-05 33.9 9.6 24 277-300 77-100 (114)
77 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 90.9 1.4 4.7E-05 38.9 9.8 28 274-301 107-134 (197)
78 3cew_A Uncharacterized cupin p 90.7 0.29 9.9E-06 39.2 4.8 37 277-315 67-103 (125)
79 1o5u_A Novel thermotoga mariti 90.7 0.19 6.3E-06 39.5 3.6 24 277-300 69-92 (101)
80 2phl_A Phaseolin; plant SEED s 90.6 0.25 8.5E-06 48.5 5.1 66 178-300 248-314 (397)
81 1yfu_A 3-hydroxyanthranilate-3 90.5 0.91 3.1E-05 39.2 7.9 65 170-299 36-100 (174)
82 1uij_A Beta subunit of beta co 90.0 0.31 1.1E-05 48.1 5.3 76 173-299 254-330 (416)
83 3h7j_A Bacilysin biosynthesis 90.0 0.99 3.4E-05 40.8 8.4 25 277-301 73-98 (243)
84 3ht1_A REMF protein; cupin fol 90.0 0.34 1.1E-05 39.5 4.8 26 276-301 79-104 (145)
85 2bnm_A Epoxidase; oxidoreducta 89.8 0.37 1.3E-05 41.8 5.2 26 276-301 162-188 (198)
86 4axo_A EUTQ, ethanolamine util 89.4 0.31 1.1E-05 41.3 4.2 24 276-299 102-125 (151)
87 3nw4_A Gentisate 1,2-dioxygena 89.4 1.7 5.7E-05 42.2 9.8 25 276-300 317-341 (368)
88 1wlt_A 176AA long hypothetical 89.1 3 0.0001 36.7 10.4 41 274-318 116-158 (196)
89 2ozi_A Hypothetical protein RP 89.1 0.27 9.2E-06 38.3 3.3 25 277-301 60-84 (98)
90 1vj2_A Novel manganese-contain 89.1 0.48 1.6E-05 38.1 4.9 25 277-301 87-111 (126)
91 3bb6_A Uncharacterized protein 89.0 0.59 2E-05 38.3 5.3 39 275-315 64-102 (127)
92 1y3t_A Hypothetical protein YX 88.9 1.5 5E-05 41.2 9.0 24 278-301 87-110 (337)
93 2cav_A Protein (canavalin); vi 88.5 0.54 1.8E-05 46.9 5.8 69 178-299 290-359 (445)
94 3d82_A Cupin 2, conserved barr 88.5 0.33 1.1E-05 36.8 3.4 23 277-299 69-91 (102)
95 2ea7_A 7S globulin-1; beta bar 88.5 0.44 1.5E-05 47.3 5.1 75 173-299 271-346 (434)
96 2ixk_A DTDP-4-dehydrorhamnose 88.3 4 0.00014 35.5 10.6 41 274-318 99-141 (184)
97 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 88.2 4.5 0.00015 35.2 10.9 41 274-318 98-140 (185)
98 1fxz_A Glycinin G1; proglycini 87.9 1.3 4.3E-05 44.5 8.1 88 171-301 51-138 (476)
99 3rns_A Cupin 2 conserved barre 87.9 1.6 5.5E-05 39.0 8.1 23 278-300 77-99 (227)
100 3ryk_A DTDP-4-dehydrorhamnose 87.8 5.4 0.00018 35.3 11.3 41 274-318 121-163 (205)
101 3bcw_A Uncharacterized protein 87.3 0.37 1.3E-05 39.2 3.2 25 276-300 87-111 (123)
102 2cav_A Protein (canavalin); vi 87.2 0.89 3.1E-05 45.2 6.5 24 277-300 129-152 (445)
103 3dl3_A Tellurite resistance pr 87.1 0.92 3.1E-05 36.7 5.3 39 275-316 63-101 (119)
104 2e9q_A 11S globulin subunit be 86.9 1.4 4.7E-05 44.1 7.7 87 171-301 66-152 (459)
105 2q30_A Uncharacterized protein 86.8 0.41 1.4E-05 36.9 3.1 24 277-300 75-98 (110)
106 1oi6_A PCZA361.16; epimerase, 86.8 6 0.0002 35.0 11.0 41 274-318 98-140 (205)
107 2i45_A Hypothetical protein; n 86.7 0.45 1.6E-05 36.8 3.3 23 277-299 68-90 (107)
108 3es1_A Cupin 2, conserved barr 86.5 1.2 4.1E-05 38.5 6.1 24 277-301 119-142 (172)
109 1dzr_A DTDP-4-dehydrorhamnose 86.4 5.7 0.00019 34.5 10.5 41 274-318 98-140 (183)
110 1y3t_A Hypothetical protein YX 86.3 3 0.0001 39.0 9.4 25 276-300 257-281 (337)
111 3h7j_A Bacilysin biosynthesis 86.2 1.2 4E-05 40.3 6.3 38 276-315 184-221 (243)
112 1y9q_A Transcriptional regulat 86.1 0.65 2.2E-05 40.1 4.3 27 275-301 143-169 (192)
113 2d5f_A Glycinin A3B4 subunit; 85.7 1.5 5.3E-05 44.1 7.4 39 171-210 48-86 (493)
114 2c0z_A NOVW; isomerase, epimer 85.5 6.1 0.00021 35.3 10.4 41 274-318 106-148 (216)
115 3qac_A 11S globulin SEED stora 85.2 2.1 7.3E-05 42.7 8.0 102 171-301 53-155 (465)
116 2pyt_A Ethanolamine utilizatio 85.2 0.63 2.2E-05 38.3 3.6 24 276-299 93-116 (133)
117 1upi_A DTDP-4-dehydrorhamnose 85.2 7.4 0.00025 34.9 10.8 89 168-318 65-159 (225)
118 2qnk_A 3-hydroxyanthranilate 3 84.3 2.6 9E-05 39.1 7.6 67 170-301 32-98 (286)
119 1vr3_A Acireductone dioxygenas 83.8 1.6 5.4E-05 38.4 5.6 38 275-314 126-163 (191)
120 2vpv_A Protein MIF2, MIF2P; nu 83.8 1.6 5.4E-05 37.5 5.5 26 276-301 128-153 (166)
121 1juh_A Quercetin 2,3-dioxygena 83.7 2.6 8.7E-05 40.4 7.6 24 277-300 292-315 (350)
122 1zrr_A E-2/E-2' protein; nicke 82.2 1.2 4E-05 38.7 4.2 37 274-312 120-156 (179)
123 3rns_A Cupin 2 conserved barre 82.0 7.1 0.00024 34.6 9.5 24 277-300 192-216 (227)
124 2xlg_A SLL1785 protein, CUCA; 82.0 1.2 4.2E-05 40.4 4.4 27 275-301 101-127 (239)
125 2rg4_A Uncharacterized protein 81.8 6.6 0.00022 34.8 9.1 41 276-316 169-210 (216)
126 3c3v_A Arachin ARAH3 isoform; 81.1 3.3 0.00011 41.9 7.5 39 170-209 50-88 (510)
127 4hn1_A Putative 3-epimerase in 80.3 9.9 0.00034 33.5 9.5 76 168-301 43-124 (201)
128 2pa7_A DTDP-6-deoxy-3,4-keto-h 78.9 8.3 0.00028 31.9 8.2 28 177-204 43-71 (141)
129 1sq4_A GLXB, glyoxylate-induce 78.6 2.5 8.4E-05 39.1 5.3 26 276-301 108-133 (278)
130 1sef_A Conserved hypothetical 77.4 17 0.00059 33.0 10.8 25 276-300 221-245 (274)
131 3kmh_A D-lyxose isomerase; cup 77.4 12 0.0004 33.8 9.1 87 171-300 108-196 (246)
132 1rc6_A Hypothetical protein YL 77.3 2.6 9E-05 38.3 5.1 26 276-301 99-124 (261)
133 3ksc_A LEGA class, prolegumin; 77.2 6.3 0.00022 39.6 8.1 87 171-301 49-135 (496)
134 3s7i_A Allergen ARA H 1, clone 76.8 2.7 9.1E-05 41.5 5.2 31 277-307 87-117 (418)
135 4h7l_A Uncharacterized protein 76.3 1.5 5E-05 37.3 2.8 22 277-298 87-108 (157)
136 1juh_A Quercetin 2,3-dioxygena 75.6 2.9 0.0001 40.0 5.1 26 276-301 94-119 (350)
137 1sef_A Conserved hypothetical 74.5 2.9 9.8E-05 38.4 4.6 26 276-301 102-127 (274)
138 2phl_A Phaseolin; plant SEED s 74.3 4.4 0.00015 39.6 6.0 23 278-300 96-124 (397)
139 1rc6_A Hypothetical protein YL 72.6 2.4 8.2E-05 38.6 3.5 26 275-300 217-242 (261)
140 2arc_A ARAC, arabinose operon 70.7 5.2 0.00018 32.6 4.9 25 276-300 56-80 (164)
141 3es4_A Uncharacterized protein 70.1 2 6.9E-05 34.5 2.1 22 277-298 81-102 (116)
142 3kgl_A Cruciferin; 11S SEED gl 69.5 3.5 0.00012 41.1 4.1 39 171-210 46-84 (466)
143 3d0j_A Uncharacterized protein 68.4 5.3 0.00018 33.1 4.3 26 275-300 75-100 (140)
144 1sfn_A Conserved hypothetical 68.3 5.2 0.00018 36.1 4.7 27 275-301 203-229 (246)
145 1zx5_A Mannosephosphate isomer 67.0 3 0.0001 39.1 2.9 23 276-298 158-180 (300)
146 1qwr_A Mannose-6-phosphate iso 66.1 3.2 0.00011 39.3 2.9 23 276-298 158-180 (319)
147 1dgw_Y Canavalin; duplicated s 64.9 5.1 0.00017 30.9 3.3 26 274-299 4-29 (93)
148 3s7i_A Allergen ARA H 1, clone 64.6 4.5 0.00016 39.8 3.7 26 274-299 330-355 (418)
149 1sfn_A Conserved hypothetical 63.8 4 0.00014 36.8 3.0 23 277-299 87-109 (246)
150 1pmi_A PMI, phosphomannose iso 63.6 4.5 0.00015 40.1 3.6 24 276-299 266-289 (440)
151 2wfp_A Mannose-6-phosphate iso 63.2 4.7 0.00016 39.3 3.6 23 276-298 240-262 (394)
152 3fz3_A Prunin; TREE NUT allerg 61.0 5.7 0.0002 40.2 3.8 40 170-210 50-89 (531)
153 1sq4_A GLXB, glyoxylate-induce 54.0 6.6 0.00023 36.2 2.7 28 274-301 228-255 (278)
154 4e2q_A Ureidoglycine aminohydr 51.4 11 0.00037 34.7 3.6 26 276-301 225-250 (266)
155 3myx_A Uncharacterized protein 49.5 8.6 0.00029 34.8 2.6 19 275-293 204-222 (238)
156 3s57_A Alpha-ketoglutarate-dep 49.4 22 0.00077 31.0 5.3 40 273-312 157-200 (204)
157 3dkq_A PKHD-type hydroxylase S 49.0 9.6 0.00033 34.6 2.9 40 275-316 157-196 (243)
158 2qnk_A 3-hydroxyanthranilate 3 49.0 15 0.00052 34.0 4.2 28 274-301 242-269 (286)
159 4e2q_A Ureidoglycine aminohydr 48.7 8.4 0.00029 35.5 2.4 23 277-299 110-132 (266)
160 1yud_A Hypothetical protein SO 46.5 25 0.00085 30.0 4.9 38 280-320 101-140 (170)
161 2q1z_B Anti-sigma factor CHRR, 41.5 19 0.00067 31.1 3.6 22 279-300 162-183 (195)
162 3ebr_A Uncharacterized RMLC-li 39.6 21 0.00072 29.9 3.4 21 279-299 81-101 (159)
163 3i3q_A Alpha-ketoglutarate-dep 37.3 50 0.0017 29.0 5.6 40 274-313 154-201 (211)
164 3gbg_A TCP pilus virulence reg 37.3 22 0.00075 31.8 3.4 23 277-299 50-72 (276)
165 2o1q_A Putative acetyl/propion 36.1 20 0.00067 29.4 2.6 22 278-299 86-108 (145)
166 3cjx_A Protein of unknown func 35.1 29 0.00098 29.3 3.5 22 279-300 83-104 (165)
167 3myx_A Uncharacterized protein 33.0 30 0.001 31.2 3.5 26 275-300 82-107 (238)
168 2iuw_A Alkylated repair protei 26.6 55 0.0019 29.2 4.1 41 273-313 184-228 (238)
169 3rcq_A Aspartyl/asparaginyl be 25.0 2.2E+02 0.0076 24.6 7.6 37 276-312 146-182 (197)
170 2opw_A Phyhd1 protein; double- 22.9 77 0.0026 28.5 4.4 40 273-312 225-265 (291)
171 2jig_A Prolyl-4 hydroxylase; h 22.9 59 0.002 28.4 3.5 40 275-316 170-218 (224)
172 1zuy_A Myosin-5 isoform; SH3 d 21.6 40 0.0014 22.3 1.6 22 277-298 17-42 (58)
173 4dpz_X HRAS-like suppressor 2; 20.8 39 0.0013 27.7 1.7 23 279-301 7-30 (137)
174 2a1x_A Phytanoyl-COA dioxygena 20.6 1.5E+02 0.005 26.9 5.9 42 273-315 213-254 (308)
No 1
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=2.6e-49 Score=365.70 Aligned_cols=233 Identities=23% Similarity=0.461 Sum_probs=187.5
Q ss_pred CcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCC
Q 016948 20 STIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS 99 (380)
Q Consensus 20 ~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~ 99 (380)
++|+|++. +|+++|+++|+.+++||||+|++.+ |||+++|+. +||++++|+. .|.|+.+.... +
T Consensus 1 stipri~~-pS~~eF~~~y~~~~~Pvvi~g~~~~--wpa~~~w~~-~yL~~~~g~~-~v~v~~~~~~~-~---------- 64 (235)
T 4gjz_A 1 STVPRLHR-PSLQHFREQFLVPGRPVILKGVADH--WPCMQKWSL-EYIQEIAGCR-TVPVEVGSRYT-D---------- 64 (235)
T ss_dssp CBCCEEES-CCHHHHHHHTTTTTCCEEEESSSTT--SHHHHHCSH-HHHHHHHTTS-EEEEEEC----------------
T ss_pred CCCCCCCC-CCHHHHHHHHhcCCCcEEEeCCCcC--CcccccCCH-HHHHHHcCCC-eEEEEecCccc-C----------
Confidence 37999998 9999999999999999999999999 999999998 9999999999 99998754311 1
Q ss_pred CcccccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccch-hhhh-hhCCCCCceEEEecC
Q 016948 100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WATE-ALGCYPEAVNLWIGN 177 (380)
Q Consensus 100 g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip-~~~~-~~~~~~~~~~lwiG~ 177 (380)
. ......|+|++|++.+..... ....|+.+.+ +...+|+|.+|+. +| +... .+.......++|||+
T Consensus 65 ----~---~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~--~~~~~~~l~~d~~--~p~~~~~~~~~~~~~~~~~wiG~ 132 (235)
T 4gjz_A 65 ----E---EWSQTLMTVNEFISKYIVNEP-RDVGYLAQHQ--LFDQIPELKQDIS--IPDYCSLGDGEEEEITINAWFGP 132 (235)
T ss_dssp ---------CEEEEEEHHHHHHHHTSSCC-SSCEEEEEEC--HHHHCHHHHTTCC--CCGGGGGSSSCGGGCEEEEEEEC
T ss_pred ----C---ccceeeccHHHHHHHHhhcCC-cccceeehhh--hhhhhHHHHHhhc--CCccccccccccCccceEEEEeC
Confidence 0 113578999999998877643 3467777643 4567788999884 33 2211 112234578999999
Q ss_pred CCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCcc
Q 016948 178 QLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPE 257 (380)
Q Consensus 178 ~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~~ 257 (380)
+|+.|++|+|+++|++|||+|+|+|+||||.+...||+..... ....|.+|+
T Consensus 133 ~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~-----------------------~~~~s~vd~----- 184 (235)
T 4gjz_A 133 QGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHL-----------------------LHNTSQVDV----- 184 (235)
T ss_dssp TTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTT-----------------------TTTBBSSCT-----
T ss_pred CCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccc-----------------------cCccccccc-----
Confidence 9999999999999999999999999999999999998643110 112355666
Q ss_pred ccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeec
Q 016948 258 TRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 258 ~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
.++|+++||+|++ +++++|+|+|||+||||+||||+|+|++ .||||||||.
T Consensus 185 -~~~d~~~~p~~~~-~~~~~~~l~pGD~LyiP~gW~H~V~~l~----~sisvn~w~s 235 (235)
T 4gjz_A 185 -ENPDLEKFPKFAK-APFLSCILSPGEILFIPVKYWHYVRALD----LSFSVSFWWS 235 (235)
T ss_dssp -TSCCTTTCGGGGG-CCCEEEEECTTCEEEECTTCEEEEEESS----SEEEEEEEEC
T ss_pred -cCcchhhCccccC-CCcEEEEECCCCEEEeCCCCcEEEEECC----CEEEEEEecC
Confidence 5789999999986 8999999999999999999999999994 6999999983
No 2
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=100.00 E-value=1.4e-43 Score=346.66 Aligned_cols=234 Identities=26% Similarity=0.511 Sum_probs=184.0
Q ss_pred CCcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCC
Q 016948 19 NSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPR 98 (380)
Q Consensus 19 ~~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~ 98 (380)
..+|+|+.. +|+++|.++|+.+++||||+| +.+ |||+++|+. +||++++|+. .|+|++++.+..+.+
T Consensus 28 ~~~I~r~~~-lS~~eF~~~y~~~~kPvVi~g-~~~--wpa~~~Ws~-dyL~~~~g~~-~V~v~~~~~~~~~~~------- 94 (338)
T 3al5_A 28 HLPVPRLEG-VSREQFMQHLYPQRKPLVLEG-IDL--GPCTSKWTV-DYLSQVGGKK-EVKIHVAAVAQMDFI------- 94 (338)
T ss_dssp CCBCCEEES-CCHHHHHHHTGGGCCCEEEES-CCC--CTHHHHCCH-HHHHHHHCSC-EEEEEC----CCCC--------
T ss_pred CCCCCEECC-CCHHHHHHHhhcCCCeEEEeC-CCC--CcccccCCH-HHHHHhhCCc-eEEEEEcCCCCcccc-------
Confidence 458999998 999999999999999999999 888 999999998 9999999998 999997765433321
Q ss_pred CCcccccccccccccCChHHHHHHHHccCC------CCcccccccccc-------cchhhhhhhcccccccch--hhhhh
Q 016948 99 SGEISQCFASAHVERLPFDEALQLVSNSKN------GDVVAYLQQQND-------CFRDEYSVLGSDCDEHIA--WATEA 163 (380)
Q Consensus 99 ~g~~~~~f~~~~~~~m~~~efl~~~~~~~~------~~~~~Yl~~~~~-------~l~~e~p~L~~Di~~~ip--~~~~~ 163 (380)
...| ..+.|+|++|++.+..... .+..+||++.+. .+..++|.|.+|+. +| |..+.
T Consensus 95 ----~~~~---~~~~~~f~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~--~P~~~~~d~ 165 (338)
T 3al5_A 95 ----SKNF---VYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK--FPEFFKEEQ 165 (338)
T ss_dssp ----CCCC---CEEEEEHHHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCC--CCCCSCGGG
T ss_pred ----cccc---eeEEeEHHHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcC--CCccccccc
Confidence 1122 3578999999999876532 235789887531 35567899999985 33 22222
Q ss_pred hCCCCCceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcc
Q 016948 164 LGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVR 243 (380)
Q Consensus 164 ~~~~~~~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~ 243 (380)
+ ...++|||++|+.|++|+|+++||+|||+|+|+|+||||.+...||+.. +.+
T Consensus 166 ~----~~s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~------------~~~----------- 218 (338)
T 3al5_A 166 F----FSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKG------------TKS----------- 218 (338)
T ss_dssp E----EEEEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEET------------TEE-----------
T ss_pred c----ccceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCC------------CCc-----------
Confidence 1 2468999999999999999999999999999999999999998888632 000
Q ss_pred cccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 244 YVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 244 ~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
+.+|. .++|+++||.|.+ +++++|+|+|||+||||+||||+|+|+ +.|||||+||...
T Consensus 219 ----~~~d~------~~~d~~~~p~~~~-~~~~~~~L~pGD~LyiP~gWwH~v~~l----~~sisvn~~~~~~ 276 (338)
T 3al5_A 219 ----EVLNI------DNPDLAKYPLFSK-ARRYECSLEAGDVLFIPALWFHNVISE----EFGVGVNIFWKHL 276 (338)
T ss_dssp ----SCCCS------SSCCTTTCTTGGG-CCEEEEEECTTCEEEECTTCEEEEEES----SCEEEEEEEECSS
T ss_pred ----ccccC------CCcchhhCccccc-CCCEEEEECCCCEEEECCCCeEEEeeC----CCEEEEEEEecCC
Confidence 12333 4568899999975 789999999999999999999999998 4799999888653
No 3
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=100.00 E-value=9.6e-44 Score=349.13 Aligned_cols=264 Identities=23% Similarity=0.402 Sum_probs=192.8
Q ss_pred HHhhhccCCCCCcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCc
Q 016948 9 DEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRA 88 (380)
Q Consensus 9 ~~~~~~~~~~~~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~ 88 (380)
.++|++++.. .+|+|++. +|++ | ++|+.+++||||+|+..+ ||| ++|+. +||++++|+. .|+|+.++.++.
T Consensus 30 ~~~~~~~~~~-~~I~Rv~~-~s~~-~-~~y~~~~~PVVi~g~~~~--wpA-~kWt~-eyL~~~~G~~-~V~V~~~~~~~~ 100 (349)
T 3d8c_A 30 SQLRSYSFPT-RPIPRLSQ-SDPR-A-EELIENEEPVVLTDTNLV--YPA-LKWDL-EYLQENIGNG-DFSVYSASTHKF 100 (349)
T ss_dssp GGSCCCSSCE-EECCEECT-TCHH-H-HHHHHTTCCEEESCCCTT--GGG-GGCCH-HHHHHHSCSS-CEEEEEESSSBC
T ss_pred HHHHhcCCCC-CCceEecC-CChh-H-HHHhcCCccEEEeCCCCC--ccc-ccCCH-HHHHHhhCCC-eEEEEECCCCcc
Confidence 4677776643 58999998 7887 5 779999999999999999 999 89998 9999999999 999988765432
Q ss_pred ccccccCCCCCCccccccccc-ccccCChHHHHHHHHccC--CCCcccccccccccchhhhhhhcccccccch--hhhhh
Q 016948 89 DSLVTLTHPRSGEISQCFASA-HVERLPFDEALQLVSNSK--NGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA--WATEA 163 (380)
Q Consensus 89 d~~~~~~~~~~g~~~~~f~~~-~~~~m~~~efl~~~~~~~--~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip--~~~~~ 163 (380)
...... .+.....|..+ ..+.|+|++|++.+.... .+...+||+++.. ....|.|..|+.. ++ |....
T Consensus 101 ~y~d~~----~~~~~~~F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~~--~~~~~~l~~D~~~-~~~~~~~~~ 173 (349)
T 3d8c_A 101 LYYDEK----KMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLN--DTVGRKIVMDFLG-FNWNWINKQ 173 (349)
T ss_dssp CCCCGG----GTTSCTTCCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEECC--TTSCHHHHHHHHT-SCHHHHHHH
T ss_pred cccccc----cccccccccccceeEeeEHHHHHHHHHhhcccCCCCCeeeecccc--cccchhhhhhhhc-cchhhhhhh
Confidence 110000 00001234332 357999999999988742 2346899987421 1122456666531 22 22211
Q ss_pred ---hCCCCC-ceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeec
Q 016948 164 ---LGCYPE-AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELE 239 (380)
Q Consensus 164 ---~~~~~~-~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d 239 (380)
.+..+. ..+||||++|+.|++|+|+++||+|||+|+|+|+||||.+...||+... .+.
T Consensus 174 ~~~~~~~~~~~~~l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~--~~~---------------- 235 (349)
T 3d8c_A 174 QGKRGWGQLTSNLLLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPV--HHP---------------- 235 (349)
T ss_dssp HHHTTCCCEEECEEEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCT--TST----------------
T ss_pred hhccccCccccceEEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccc--cCC----------------
Confidence 122222 2469999999999999999999999999999999999999888886421 110
Q ss_pred CCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 240 EPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 240 ~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
...+|.+|+ .++|+++||.|.+ +++++|+|+|||+||||+||||+|+|+++ +++||||||||++...
T Consensus 236 ----~~~~s~vd~------~~~d~~~~p~~~~-~~~~~~~l~pGD~LyiP~gWwH~V~~l~d-~~~sisvn~w~~~~~~ 302 (349)
T 3d8c_A 236 ----CDRQSQVDF------DNPDYERFPNFQN-VVGYETVVGPGDVLYIPMYWWHHIESLLN-GGITITVNFWYKGAPT 302 (349)
T ss_dssp ----TBTBBCSCT------TSCCTTTCGGGGG-CCEEEEEECTTCEEEECTTCEEEEEECTT-SCCEEEEEEEEECCCC
T ss_pred ----CCCcccccC------CCcchhhCccccc-CCcEEEEECCCCEEEECCCCcEEEEEcCC-CCcEEEEEEEcCCCCC
Confidence 011355665 4678999999975 78999999999999999999999999963 3799999999987643
No 4
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=5e-41 Score=327.02 Aligned_cols=237 Identities=17% Similarity=0.302 Sum_probs=180.2
Q ss_pred CCCcceeeCC-CCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCC
Q 016948 18 SNSTIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTH 96 (380)
Q Consensus 18 ~~~~V~rv~~-~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~ 96 (380)
..+.|+|++. .+|+++|.++|+.+++||||+|++.+ |||+++|+. +||++++|+. .|.|..+.+
T Consensus 43 ~~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~--WpA~~~Wt~-~yL~~~~G~~-~V~v~~~~~----------- 107 (336)
T 3k2o_A 43 VADNVERADALQLSVEEFVERYERPYKPVVLLNAQEG--WSAQEKWTL-ERLKRKYRNQ-KFKCGEDND----------- 107 (336)
T ss_dssp CCCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTT--CTHHHHCSH-HHHHHHSTTC-EEEEEECTT-----------
T ss_pred cCCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCC--ChhHhhhhH-HHHHHHhCCc-eEEEEecCC-----------
Confidence 3569999984 69999999999999999999999999 999999998 9999999999 998875421
Q ss_pred CCCCcccccccccccccCChHHHHHHHHccCCCCcccccccccccch--hhhhhhcccccccch--hhhhhhC-----CC
Q 016948 97 PRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFR--DEYSVLGSDCDEHIA--WATEALG-----CY 167 (380)
Q Consensus 97 ~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~--~e~p~L~~Di~~~ip--~~~~~~~-----~~ 167 (380)
| ....|+|++|++.+.+... +..+||.+.+ +. ..+|.|.+|+. +| |.++.|+ ..
T Consensus 108 ---~---------~~~~m~~~~fl~~~~~~~~-~~~lYL~d~~--~~e~~~~p~L~~dy~--~P~~f~~d~~~~~~~~~~ 170 (336)
T 3k2o_A 108 ---G---------YSVKMKMKYYIEYMESTRD-DSPLYIFDSS--YGEHPKRRKLLEDYK--VPKFFTDDLFQYAGEKRR 170 (336)
T ss_dssp ---S---------CEEEEEHHHHHHHHHHCCC-SSCCCEEESC--GGGSTTGGGGGGGCC--CCGGGCCCGGGGGCTTTS
T ss_pred ---C---------ceeeecHHHHHHHHHhcCC-CCCceEeccc--ccccccchhHHHhcC--CCcccccchhhhcccccC
Confidence 1 1468999999999987643 4589999753 33 24789999995 44 4444442 24
Q ss_pred CCceEEEecCCCCcccccccCCC--ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccc
Q 016948 168 PEAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (380)
Q Consensus 168 ~~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~ 245 (380)
+...++|||++|++|++|+|+++ ||++||.|+|+|+||||.+...||.. +... .+.. ....+
T Consensus 171 p~~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~--~~~~--------~~~~------~~~~~ 234 (336)
T 3k2o_A 171 PPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKV--TRDE--------GGNQ------QDEAI 234 (336)
T ss_dssp CCCEEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCC--CHHH--------HGGG------TTCHH
T ss_pred CCceEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccC--cccc--------cCCC------ccchh
Confidence 56789999999999999999987 69999999999999999988777742 1110 0000 00001
Q ss_pred cccccCCCCCccccchhhccCCCCCC-----CCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCChh
Q 016948 246 PWCSVNPYPSPETRESEMAKFPLYFN-----GPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFDIK 320 (380)
Q Consensus 246 ~~s~vd~~~~~~~~~~d~~~fP~f~~-----~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~~~ 320 (380)
.| +...||.+.. .+++++|+|+|||+||||+||||+|.|++ .||+||+||....+..
T Consensus 235 ~w--------------~~~~~P~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~----~sisv~~~f~~~~nl~ 296 (336)
T 3k2o_A 235 TW--------------FNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLD----TTIAITQNFASSTNFP 296 (336)
T ss_dssp HH--------------HHHTGGGGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESS----CEEEEEEEECCTTTHH
T ss_pred hh--------------hhhhCcchhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCC----CeEEEEcccCCcccHH
Confidence 11 1233443321 26789999999999999999999999995 4888888887776543
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.98 E-value=5.3e-33 Score=278.43 Aligned_cols=226 Identities=15% Similarity=0.165 Sum_probs=159.0
Q ss_pred CCcceeeCC-CCCHHHHHHHhhcCCCcEEEECCCCCCCCcc---ccCCCChhhhHhhcCCCCcEEEEecCCCCccccccc
Q 016948 19 NSTIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPA---FSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTL 94 (380)
Q Consensus 19 ~~~V~rv~~-~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA---~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~ 94 (380)
.+.|+|++. .+|. +|+++ ...++||||+|+ .+ |+| .++|+. +||++.+|+.+.|.|.-...
T Consensus 51 ~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~--Wpa~~P~~kWt~-dyL~~~~G~d~~V~V~D~~~--------- 115 (451)
T 2yu1_A 51 ANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DG--LGIKMPDPDFTV-NDVKMCVGSRRMVDVMDVNT--------- 115 (451)
T ss_dssp CCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TT--TTCBCCCTTCCH-HHHHHHTCTTCCCCCEETTS---------
T ss_pred CCceEecccccCCH-HHHHh-cCCCCcEEEccC-cC--CCCcCCcCCCCH-HHHHHHcCCCceEeeEEcCC---------
Confidence 368999996 7899 99988 689999999999 88 999 789998 99999999632777641110
Q ss_pred CCCCCCcccccccccccccCChHHHHHHHHccCCCCccccc-----ccccccch--hhhhhhcccccccch--hhh----
Q 016948 95 THPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYL-----QQQNDCFR--DEYSVLGSDCDEHIA--WAT---- 161 (380)
Q Consensus 95 ~~~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl-----~~~~~~l~--~e~p~L~~Di~~~ip--~~~---- 161 (380)
+ ...+|+|++|++++.+.......+|+ .+. ..+. ...|.|..|+. -++ |.+
T Consensus 116 -----q---------~~~~M~l~eyidy~~~~~d~r~~LY~v~sLeF~~-~~l~~~~~~P~l~~d~D-wv~~~~p~~l~~ 179 (451)
T 2yu1_A 116 -----Q---------KGIEMTMAQWTRYYETPEEEREKLYNVISLEFSH-TRLENMVQRPSTVDFID-WVDNMWPRHLKE 179 (451)
T ss_dssp -----S---------CCTTCCHHHHHHHHTSCTTTCCSCEEEEEECCTT-STTGGGCBCCHHHHHHC-HHHHHSCGGGCC
T ss_pred -----C---------cceeeeHHHHHHHHhhccccccchhhhccccccc-ccccccccCchhhhhhh-cccccCchhhhh
Confidence 1 24689999999999887543356777 221 1121 12356655442 122 222
Q ss_pred ---hhh---C--CCCCc-eEEEecCCCCcccccccCCC--ceEEEEeeeEEEEEeCCCCcCC-CcccccCCccccccccC
Q 016948 162 ---EAL---G--CYPEA-VNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVN 229 (380)
Q Consensus 162 ---~~~---~--~~~~~-~~lwiG~~gs~t~lH~D~~~--n~~~qv~G~K~~~L~pP~~~~~-Ly~~~~p~~~~~~~~~~ 229 (380)
+.| + ..|.. .++|||++||.|++|+|+++ +|++||+|+|+|+||||.+... +|... ..
T Consensus 180 ~~~d~f~~lge~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~------~~---- 249 (451)
T 2yu1_A 180 SQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENW------LL---- 249 (451)
T ss_dssp -----------CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHH------HH----
T ss_pred hhhhhhhhcccccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccc------cc----
Confidence 122 1 23433 79999999999999999965 8999999999999999998654 22210 00
Q ss_pred CCcceeeeecCCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEE
Q 016948 230 DVERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIAL 309 (380)
Q Consensus 230 ~~~~~~~~~d~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsv 309 (380)
++ + ..+ ..||.+. .++++|+|+|||+||||+||||+|.|+++ +++|+.
T Consensus 250 -s~------------------~--------q~~-~~~p~~~--~~~~~v~l~pGE~LfIPsGWwH~V~nled--sIait~ 297 (451)
T 2yu1_A 250 -SG------------------S--------QGD-IFLGDRV--SDCQRIELKQGYTFVIPSGWIHAVYTPTD--TLVFGG 297 (451)
T ss_dssp -TT------------------C--------CSS-SCHHHHS--SCCEEEEECTTCEEEECTTCEEEEECSSC--EEEEEE
T ss_pred -cc------------------c--------chh-hhhcccc--ccceEEEECCCcEEEeCCCceEEEecCCC--eEEEee
Confidence 00 0 000 1133332 57899999999999999999999999974 788888
Q ss_pred EeeecCCC
Q 016948 310 NYWYDMQF 317 (380)
Q Consensus 310 n~w~~~~~ 317 (380)
|||...++
T Consensus 298 NF~~~~nl 305 (451)
T 2yu1_A 298 NFLHSFNI 305 (451)
T ss_dssp EECCSSSH
T ss_pred eeCCcccH
Confidence 99976654
No 6
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.96 E-value=2.2e-30 Score=252.55 Aligned_cols=236 Identities=17% Similarity=0.232 Sum_probs=155.6
Q ss_pred HhhhccCCCC-CcceeeCC-CCCHHHHHHHhhcCCCcEEEECCC---CCCCCccccCCCChhhhHhhcCCCCcEEEEecC
Q 016948 10 EVRELSLGSN-STIERLES-PPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSP 84 (380)
Q Consensus 10 ~~~~~~~~~~-~~V~rv~~-~~s~~~F~~~yv~~~~PvVi~g~~---~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~ 84 (380)
+++.-.+++. .-|.++.. ++|.+-|.+.. .++||||++.. .. ||+. +|+. +|+++.+|+.+.|.|.-..
T Consensus 6 ~~~~~~~~~~~~~v~~i~~~d~t~~y~~~~~--~~~Pvli~~~~glg~~--~P~~-~~tv-~~v~~~vG~d~~V~ViDv~ 79 (371)
T 3k3o_A 6 ELRSRTFDSSDEVILKPTGNQLTVEFLEENS--FSVPILVLKKDGLGMT--LPSP-SFTV-RDVEHYVGSDKEIDVIDVT 79 (371)
T ss_dssp -CCCCCCBCCTTTSBCCCTTTCCHHHHHHHT--TCSCEEESSCTTSCCB--CCCT-TCCH-HHHHHHHCC-CEEEEEETT
T ss_pred HHhhCCCCCHHHhcccCChhhCcHHHHHhcC--CCCCEEEecCcccCCc--CCCC-CCCH-HHHHHHcCCCceEeeeecC
Confidence 3444444443 24556654 56666555532 48999999855 46 9987 8999 9999999944388876221
Q ss_pred CCCcccccccCCCCCCcccccccccccccCChHHHHHHHHccCCCCcccccccccc---cchh--hhhhhccccc-ccch
Q 016948 85 NGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQND---CFRD--EYSVLGSDCD-EHIA 158 (380)
Q Consensus 85 ~~~~d~~~~~~~~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~---~l~~--e~p~L~~Di~-~~ip 158 (380)
+ + ...+|+|++|++++.+.. .+..+|+.+..- .+.. +.|.+..|+. -..-
T Consensus 80 ~--------------Q---------~~~~M~l~~y~dY~~~~~-re~~lnv~d~efs~~~L~~~~~~P~~~~d~d~~~~~ 135 (371)
T 3k3o_A 80 R--------------Q---------ADCKMKLGDFVKYYYSGK-REKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENL 135 (371)
T ss_dssp T--------------T---------EEEEEEHHHHHHHHTCTT-CCSCEEEEEEECTTSGGGGTCBCCHHHHHHCHHHHH
T ss_pred c--------------C---------CCccccHHHHHHHHhccC-CCCceeeechhccchhhhccccCCchhhhhhhhhhc
Confidence 1 1 246899999999998764 356888866320 1111 3355554431 0001
Q ss_pred hhhhhhCCCCC-ceEEEecCCCCcccccccCCCc--eEEEEeeeEEEEEeCCCCcCC-CcccccCCccccccccCCCcce
Q 016948 159 WATEALGCYPE-AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVNDVERF 234 (380)
Q Consensus 159 ~~~~~~~~~~~-~~~lwiG~~gs~t~lH~D~~~n--~~~qv~G~K~~~L~pP~~~~~-Ly~~~~p~~~~~~~~~~~~~~~ 234 (380)
|+...++..|. ..++|||++||.|++|+|++++ |++||+|+|+|+||||.+.+. +|...
T Consensus 136 wp~~~~~~rP~~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~----------------- 198 (371)
T 3k3o_A 136 WPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECW----------------- 198 (371)
T ss_dssp SCSSCSSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH-----------------
T ss_pred CChhhhccCCCceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCcccccccccc-----------------
Confidence 22222334444 5799999999999999999875 899999999999999987643 43210
Q ss_pred eeeecCCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeec
Q 016948 235 TLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 235 ~~~~d~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
+. .. .+.+.|+... .+++++|+|+|||+||||+||||+|.|++| +++|+.||+-.
T Consensus 199 -------------~~-s~--------~~~e~~~~~~-~~~~~ev~l~pGEtLfIPsGWwH~V~nled--SIai~~NFl~~ 253 (371)
T 3k3o_A 199 -------------SS-SS--------NQNEMFFGDQ-VDKCYKCSVKQGQTLFIPTGWIHAVLTPVD--CLAFGGNFLHS 253 (371)
T ss_dssp -------------HT-ST--------TGGGSCGGGT-SSCCEEEEEETTCEEEECTTCEEEEEEEEE--EEEEEEEECCS
T ss_pred -------------cc-CC--------ccchhhcccc-cCceEEEEECCCcEEEeCCCCeEEEecCCC--eEEECCcccch
Confidence 00 00 0111222211 267899999999999999999999999974 77778788776
Q ss_pred CCC
Q 016948 315 MQF 317 (380)
Q Consensus 315 ~~~ 317 (380)
.+.
T Consensus 254 ~nl 256 (371)
T 3k3o_A 254 LNI 256 (371)
T ss_dssp TTH
T ss_pred hhH
Confidence 653
No 7
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.96 E-value=3.1e-29 Score=245.24 Aligned_cols=233 Identities=15% Similarity=0.127 Sum_probs=148.9
Q ss_pred CCCCHHHHHHHhhcCCCcEEEECCCCCCCC-ccccCCCChhhhHhhcCCCCc---EEEEecCCCCcccccccCCCCCCcc
Q 016948 27 SPPTPLQFLRDYVSQNKPCIIKNVSLHHQW-PAFSLWPHPSYLSKTLSSSPP---VSVHLSPNGRADSLVTLTHPRSGEI 102 (380)
Q Consensus 27 ~~~s~~~F~~~yv~~~~PvVi~g~~~~~~W-pA~~~Wt~~~yL~~~~G~~~~---V~v~~~~~~~~d~~~~~~~~~~g~~ 102 (380)
..+|+++|+++|+ .++||||+|+ .+ | ++ .|+. ++|.+.++.. . ..|++.. +...
T Consensus 26 ~~is~e~F~~~yw-~kkPlvir~~-~~--~~~~--l~s~-~~L~~l~~~~-~v~~~~vrl~~-~~~~------------- 83 (342)
T 1vrb_A 26 SPVTMSEFLEEYW-PVKPLVARGE-VE--RFTS--IPGF-EKVRTLENVL-AIYNNPVMVVG-DAVI------------- 83 (342)
T ss_dssp TTSCHHHHHHHTT-TTSCEEECCC-GG--GGGG--STTC-GGGSSHHHHH-HHCCSCEEEC-------------------
T ss_pred cCCCHHHHHHHHh-ccCCEEEcCC-cc--cccC--CCCH-HHHHHHHhhc-CcCcCceEEeC-CCcC-------------
Confidence 3499999999999 6899999999 66 6 43 6887 7777776643 2 1223211 1000
Q ss_pred cccccccccc-cCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccchhhhhhhCCCCCceE----EEecC
Q 016948 103 SQCFASAHVE-RLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVN----LWIGN 177 (380)
Q Consensus 103 ~~~f~~~~~~-~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip~~~~~~~~~~~~~~----lwiG~ 177 (380)
...|.. ... .+++.+|.+....+ ..+++.+.+. ...++..|.+++. ..++.. ...| +|+|+
T Consensus 84 ~~~~~~-~~g~~~~~~~~~~l~~~g----~tl~v~~~~~-~~p~l~~l~~~~~-------~~~~~~-~~~n~~~~~~~gp 149 (342)
T 1vrb_A 84 EESEGI-TDRFLVSPAEALEWYEKG----AALEFDFTDL-FIPQVRRWIEKLK-------AELRLP-AGTSSKAIVYAAK 149 (342)
T ss_dssp ---------CEEECHHHHHHHHHTT----CCEEECCGGG-TCTHHHHHHHHHH-------HHTTCC-TTCCEEEEEEEEC
T ss_pred cccccc-CCCcccCHHHHHHHHhCC----CeEEECChhH-hChHHHHHHHhhh-------hhcCCc-ccccccceEEEeC
Confidence 001211 122 57788887665442 4566665332 2234445555542 112221 2344 99999
Q ss_pred CCCcccccccCCCceEEEEeeeEEEEEe-CCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCc
Q 016948 178 QLSETSFHKDHYENLYTVVSGQKHFLLL-PPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSP 256 (380)
Q Consensus 178 ~gs~t~lH~D~~~n~~~qv~G~K~~~L~-pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~ 256 (380)
+|+.+++|+|+++||++||.|+|+|+|| ||.....||+... .+ .+.+.+|.
T Consensus 150 ~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~------------~~------------~~~~~~~~---- 201 (342)
T 1vrb_A 150 NGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDL------------SE------------APYYPDDL---- 201 (342)
T ss_dssp SSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEEC------------C----------------CCHHH----
T ss_pred CCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccc------------cc------------cccccccc----
Confidence 9999999999999999999999999999 8886655664110 00 01122322
Q ss_pred cccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCChhhHHHHHHHHhc
Q 016948 257 ETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFDIKYAYFNFLQSLH 331 (380)
Q Consensus 257 ~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~~~~~~~~~~~~~~ 331 (380)
.+++.++||.+.. +..++|+|+|||+||||+||||+|+++++ +.|+++++. ...+.+....+++.+.
T Consensus 202 --~~~~~~~~p~~~~-~~~~~~~L~pGD~LyiP~gwwH~v~s~~~--~~slsvsi~---~~~~~dll~~~l~~~~ 268 (342)
T 1vrb_A 202 --QSYWKGDPPKEDL-PDAEIVNLTPGTMLYLPRGLWHSTKSDQA--TLALNITFG---QPAWLDLMLAALRKKL 268 (342)
T ss_dssp --HHHCCSCCCCTTC-CSSEEEEECTTCEEEECTTCEEEEECSSC--EEEEEEEEC---CCBHHHHHHHHHHHHH
T ss_pred --cccchhhcccccc-CCceEEEECCCcEEEeCCCccEEEEECCC--CceEEEEEC---CCcHHHHHHHHHHHHH
Confidence 3556678999875 88999999999999999999999999842 345555555 3345555556666554
No 8
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.96 E-value=2.8e-29 Score=246.07 Aligned_cols=218 Identities=20% Similarity=0.304 Sum_probs=152.1
Q ss_pred CCHHHHHHHhhcC---CCcEEEECCC---CCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCCCcc
Q 016948 29 PTPLQFLRDYVSQ---NKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEI 102 (380)
Q Consensus 29 ~s~~~F~~~yv~~---~~PvVi~g~~---~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~g~~ 102 (380)
++.++|..+|+.. ++|+||++.. .. ||+ .+|+. +|+++.+|+.+.|.|.-..+ +
T Consensus 49 ~~g~~f~~~yl~~~g~~~Pvli~~~~glgm~--~P~-~~~tv-~~v~~~vG~d~~V~ViDv~~--------------Q-- 108 (392)
T 3pua_A 49 VPGSQLTLGYMEEHGFTEPILVPKKDGLGLA--VPA-PTFYV-SDVENYVGPERSVDVTDVTK--------------Q-- 108 (392)
T ss_dssp CCGGGCCHHHHHHHTTCSCEEESSCTTTTCB--CCC-TTCCH-HHHHHHHCTTCEEEEEETTT--------------T--
T ss_pred CChhhchHHHHHhcCCCccEEEeCCccccCc--CCC-CCCCH-HHHHHHcCCCcEEeeeecCc--------------C--
Confidence 4555555555555 9999999865 46 998 68999 99999999443888863211 1
Q ss_pred cccccccccccCChHHHHHHHHccCCCCccccccccc---ccchh--hhhhhcccccccch--hhhhhhCCCCC-ceEEE
Q 016948 103 SQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQN---DCFRD--EYSVLGSDCDEHIA--WATEALGCYPE-AVNLW 174 (380)
Q Consensus 103 ~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~---~~l~~--e~p~L~~Di~~~ip--~~~~~~~~~~~-~~~lw 174 (380)
...+|+|++|++++.+.. ....+|+.+.. ..+.. +.|.+..|+. -++ |.+..+...|. ..++|
T Consensus 109 -------~~~~M~l~~yv~Y~~~~~-re~~lnv~dlefs~t~L~~~~~~P~lv~d~d-~v~~~wp~~~~~~rP~v~r~~~ 179 (392)
T 3pua_A 109 -------KDCKMKLKEFVDYYYSTN-RKRVLNVTNLEFSDTRMSSFVEPPDIVKKLS-WVENYWPDDALLAKPKVTKYCL 179 (392)
T ss_dssp -------EEEEEEHHHHHHHHTCSS-CCSCEEEEEEECTTSGGGGGCBCCHHHHHHC-HHHHHSCTTCSSCCCSCSCEEE
T ss_pred -------cCccccHHHHHHHHhccC-CCcceEeeecccccchhhccccCchhhhhhh-hhhhccchhhhhcCCCceeEEE
Confidence 246899999999998874 45688887632 01111 3466666553 122 44445554554 88999
Q ss_pred ecCCCCcccccccCCC--ceEEEEeeeEEEEEeCCCCcCC-CcccccCCccccccccCCCcceeeeecCCcccccccccC
Q 016948 175 IGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVN 251 (380)
Q Consensus 175 iG~~gs~t~lH~D~~~--n~~~qv~G~K~~~L~pP~~~~~-Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd 251 (380)
||++||.|++|+|+.. +|+++++|+|+|+||||.+.+. +|.. |+.-.
T Consensus 180 mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~------------------------------~~~s~ 229 (392)
T 3pua_A 180 ICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYER------------------------------WRSAS 229 (392)
T ss_dssp EECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------------------------------HHHST
T ss_pred EeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhh------------------------------cccCc
Confidence 9999999999999976 5999999999999999987532 2211 00000
Q ss_pred CCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCC
Q 016948 252 PYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQF 317 (380)
Q Consensus 252 ~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~ 317 (380)
.+.+.|+... ..++++|+|+|||+||||+||||+|.|++| +++|+.||.-..+.
T Consensus 230 ---------~~~e~~~~~~-~~~~~ev~l~pGEtlfIPsGWwH~V~nled--SIai~gNFl~~~nl 283 (392)
T 3pua_A 230 ---------NHSEMFFADQ-VDKCYKCIVKQGQTLFIPSGWIYATLTPVD--CLAFAGHFLHSLSV 283 (392)
T ss_dssp ---------TGGGSCGGGG-SSCCEEEEEETTCEEEECTTCEEEEEEEEE--EEEEEEEECCTTCH
T ss_pred ---------chhhhhhccc-ccceEEEEECCCcEEeeCCCceEEEecCCC--EEEEcCcccChhhH
Confidence 0111222111 267899999999999999999999999974 67777788766553
No 9
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.96 E-value=5.1e-29 Score=252.73 Aligned_cols=216 Identities=19% Similarity=0.284 Sum_probs=144.9
Q ss_pred cceeeCC-CCCHHHHHHHhhcCCCcEEEECCC---CCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCC
Q 016948 21 TIERLES-PPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTH 96 (380)
Q Consensus 21 ~V~rv~~-~~s~~~F~~~yv~~~~PvVi~g~~---~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~ 96 (380)
-|.++.. +++.+-|.+.. .++||||++.. .. ||+ .+|+. +|+++.+|..+.|.|.-..+
T Consensus 137 ~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~--~P~-~~~t~-~~v~~~~G~d~~V~V~Dv~~----------- 199 (488)
T 3kv5_D 137 IIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLR--LPS-PTFSV-MDVERYVGGDKVIDVIDVAR----------- 199 (488)
T ss_dssp TCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCB--CCC-TTCCH-HHHHHHHCTTCEEEEEETTT-----------
T ss_pred eeeccccccchHHHHHhcC--CCCCEEEecCCCcCCc--CCC-CCCcH-HHHHHHhCCCceeeeeecCc-----------
Confidence 4556553 45555554432 49999999864 46 998 78999 99999999443888862211
Q ss_pred CCCCcccccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccch-------hhhhh-----h
Q 016948 97 PRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-------WATEA-----L 164 (380)
Q Consensus 97 ~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip-------~~~~~-----~ 164 (380)
+ ...+|+|++|++++.+.. ....+|+.+.. +. + ..|.+++. +| |.+.+ +
T Consensus 200 ---Q---------~~~~m~l~~yi~y~~~~~-r~~~~nv~sle--fs-~-~~L~~~~~--~P~~~~~~d~~~~~wp~~~~ 260 (488)
T 3kv5_D 200 ---Q---------ADSKMTLHNYVKYFMNPN-RPKVLNVISLE--FS-D-TKMSELVE--VPDIAKKLSWVENYWPDDSV 260 (488)
T ss_dssp ---T---------EEEEEEHHHHHHHHHSSS-CSSCEEEEEEE--CT-T-SGGGGGCB--CCHHHHHHCHHHHHCCTTCS
T ss_pred ---c---------ccccccHHHHHHHHhccC-Ccccccccccc--cc-c-chhhccCC--CChhhhhhchhhhcCccccc
Confidence 1 246899999999998863 34566666532 11 1 12444442 22 11111 1
Q ss_pred C-CCCCceEEEecCCCCcccccccCCCc--eEEEEeeeEEEEEeCCCCcC-CCcccccCCccccccccCCCcceeeeecC
Q 016948 165 G-CYPEAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RMYIRQYPAAHYSYSRVNDVERFTLELEE 240 (380)
Q Consensus 165 ~-~~~~~~~lwiG~~gs~t~lH~D~~~n--~~~qv~G~K~~~L~pP~~~~-~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~ 240 (380)
. +.....++|||++||.|++|+|+++| |++||+|+|+|+||||.+.+ .+|..
T Consensus 261 ~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~------------------------ 316 (488)
T 3kv5_D 261 FPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYES------------------------ 316 (488)
T ss_dssp SCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------------------------
T ss_pred ccCcccceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccc------------------------
Confidence 1 12235789999999999999999886 89999999999999998654 24421
Q ss_pred CcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 241 PVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 241 p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
|+.. .++.+.|+... ..++++|+|+|||+||||+||||+|.|+++ ||+||.+|-+.
T Consensus 317 ------~~~~---------~~~~~~~~~~~-~~~~~~~~l~pGe~lfIPsGWwH~V~nled----sIai~~NF~~~ 372 (488)
T 3kv5_D 317 ------WSSS---------VTQSEVFFGDK-VDKCYKCVVKQGHTLFVPTGWIHAVLTSQD----CMAFGGNFLHN 372 (488)
T ss_dssp ------HHTC---------SSGGGSCGGGS-SSCCEEEEEETTCEEEECTTCEEEEEEEEE----EEEEEEEECCS
T ss_pred ------cccC---------Cccchhhhccc-ccceEEEeeCCCCEEEeCCCceEEeeCCCC----eEEEccccCCc
Confidence 1100 01223444433 268999999999999999999999999963 55555444444
No 10
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.95 E-value=7.5e-29 Score=243.74 Aligned_cols=234 Identities=19% Similarity=0.278 Sum_probs=155.2
Q ss_pred HhhhccCCCC-CcceeeCC-CCCHHHHHHHhhcCCCcEEEECCC---CCCCCccccCCCChhhhHhhcCCCCcEEEEecC
Q 016948 10 EVRELSLGSN-STIERLES-PPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSP 84 (380)
Q Consensus 10 ~~~~~~~~~~-~~V~rv~~-~~s~~~F~~~yv~~~~PvVi~g~~---~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~ 84 (380)
+++--.+++. ..|.+++. +++.+-|.+. ..++||||++.. .. ||+ .+|+. +|+++.+|..+.|+|.-..
T Consensus 34 ~~~~~~~~~~~~~v~~i~g~d~t~~y~~~~--~~~~Pvli~~~~glg~~--~P~-~~~tv-~~v~~~vG~d~~V~ViDv~ 107 (397)
T 3kv9_A 34 ELRSRVFPSADEIIIKMHGSQLTQRYLEKH--GFDVPIMVPKLDDLGLR--LPS-PTFSV-MDVERYVGGDKVIDVIDVA 107 (397)
T ss_dssp HHHHCCCCBGGGTCEECCTTTCCHHHHHHH--CSCSCEEESSCTTSCCB--CCC-TTCCH-HHHHHHHTTTSEEEEEETT
T ss_pred HHhcCCCCChhHeeecCCHHHhhHHHHHhc--CCCCcEEEecCccccCc--CCC-CCCCH-HHHHHHhCCCceEeeeecC
Confidence 3444445542 36888875 6777766554 458999999865 46 999 79999 9999999944388886221
Q ss_pred CCCcccccccCCCCCCcccccccccccccCChHHHHHHHHccCCCCcccccccccc---cchh--hhhhhcccccccch-
Q 016948 85 NGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQND---CFRD--EYSVLGSDCDEHIA- 158 (380)
Q Consensus 85 ~~~~d~~~~~~~~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~---~l~~--e~p~L~~Di~~~ip- 158 (380)
+ + ...+|+|++|++++.+.. ....+|+.+..- .+.. +.|.+..|+. -+.
T Consensus 108 ~--------------Q---------~~~~M~l~~yv~Y~~~~~-r~~~lnvislefs~~~L~~~~~~P~~v~d~D-wv~~ 162 (397)
T 3kv9_A 108 R--------------Q---------ADSKMTLHNYVKYFMNPN-RPKVLNVISLEFSDTKMSELVEVPDIAKKLS-WVEN 162 (397)
T ss_dssp T--------------T---------EEEEEEHHHHHHHHHCSS-CSSCEEEEEEECTTSGGGGGCBCCHHHHHHC-HHHH
T ss_pred c--------------c---------cCccccHHHHHHHHhccC-CCccceecchhhccchhccCcCCCceeeccc-hhhh
Confidence 1 1 246899999999998874 345677765320 0111 1233433221 000
Q ss_pred -hhhhhhCCCC-CceEEEecCCCCcccccccCCCc--eEEEEeeeEEEEEeCCCCcC-CCcccccCCccccccccCCCcc
Q 016948 159 -WATEALGCYP-EAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RMYIRQYPAAHYSYSRVNDVER 233 (380)
Q Consensus 159 -~~~~~~~~~~-~~~~lwiG~~gs~t~lH~D~~~n--~~~qv~G~K~~~L~pP~~~~-~Ly~~~~p~~~~~~~~~~~~~~ 233 (380)
|.+..+...| ...++|||++||.|++|+|+.++ |++||+|+|+|+||||...+ .+|...
T Consensus 163 ~wp~~~~~~rP~v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~---------------- 226 (397)
T 3kv9_A 163 YWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESW---------------- 226 (397)
T ss_dssp HCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH----------------
T ss_pred cCCchhccCCccceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCccccccccccc----------------
Confidence 1111122222 45789999999999999999875 89999999999999998764 344210
Q ss_pred eeeeecCCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeee
Q 016948 234 FTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWY 313 (380)
Q Consensus 234 ~~~~~d~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~ 313 (380)
+. + ..+.+.|+... ..++++|+|+|||+||||+||||+|.|++| +++|+.||+-
T Consensus 227 --------------~~-s--------~~~~e~~~~~~-~~~~~~v~l~pGe~lfIPsGW~H~V~nled--SIai~~NFl~ 280 (397)
T 3kv9_A 227 --------------SS-S--------VTQSEVFFGDK-VDKCYKCVVKQGHTLFVPTGWIHAVLTSQD--CMAFGGNFLH 280 (397)
T ss_dssp --------------HT-S--------GGGGGSCGGGG-SSCCEEEEEETTCEEEECTTCEEEEEEEEE--EEEEEEEECC
T ss_pred --------------cc-C--------CCcchhhhccc-cCceEEEEECCCCEEEeCCCCeEEccCCcC--eEEECCcccC
Confidence 00 0 00111222211 267899999999999999999999999964 6666667876
Q ss_pred cCC
Q 016948 314 DMQ 316 (380)
Q Consensus 314 ~~~ 316 (380)
..+
T Consensus 281 ~~n 283 (397)
T 3kv9_A 281 NLN 283 (397)
T ss_dssp STT
T ss_pred chh
Confidence 655
No 11
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=242.05 Aligned_cols=212 Identities=19% Similarity=0.300 Sum_probs=146.9
Q ss_pred CCHHHHHHHhhcC---CCcEEEECCC---CCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCCCcc
Q 016948 29 PTPLQFLRDYVSQ---NKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEI 102 (380)
Q Consensus 29 ~s~~~F~~~yv~~---~~PvVi~g~~---~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~g~~ 102 (380)
++.++|..+|+.+ ++|+||++.. .. ||+. +|+. +|+++.+|..+.|.|.-..+ +
T Consensus 106 ~~g~~~~~~~~~~~~~~~Pvli~~~~glgm~--~P~~-~~tv-~~v~~~~G~d~~V~ViDv~~--------------Q-- 165 (447)
T 3kv4_A 106 PTGNQLTVEFLEENSFSVPILVLKKDGLGMT--LPSP-SFTV-RDVEHYVGSDKEIDVIDVTR--------------Q-- 165 (447)
T ss_dssp CCTTTCCHHHHHHTTSCSCEEESSCTTSCCB--CCCT-TCCH-HHHHHHHCTTCEEEEEETTT--------------T--
T ss_pred cchhhchHHHHHhcCCCCCEEEecCcccCCc--CCCc-cCCH-HHHHHHcCCCceEcceecCc--------------C--
Confidence 4555555555555 8999999654 57 9987 8999 99999999443888762211 1
Q ss_pred cccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccch-hh------h-----hhhCCCC-C
Q 016948 103 SQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WA------T-----EALGCYP-E 169 (380)
Q Consensus 103 ~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip-~~------~-----~~~~~~~-~ 169 (380)
...+|+|++|++++.+.. .+..+|+.+.. +. +. .|.+++. +| +. . ..+...| .
T Consensus 166 -------~~~~M~l~~y~dy~~~~~-r~~~lnv~d~e--fs-~~-~L~~~~~--~P~~~~~~D~~~~lw~~~~~~~rP~v 231 (447)
T 3kv4_A 166 -------ADCKMKLGDFVKYYYSGK-REKVLNVISLE--FS-DT-RLSNLVE--TPKIVRKLSWVENLWPEECVFERPNV 231 (447)
T ss_dssp -------EEEEEEHHHHHHHHHSSC-CSSCEEEEEEE--CT-TS-GGGGGCB--CCHHHHHHCHHHHHCCSCTTSCCCCC
T ss_pred -------ccccccHHHHHHHHhccC-CCCceeecccc--cc-cc-hhhhccC--CCceecccchhhhcccchhhccCCCc
Confidence 246899999999998874 45688887632 11 11 2555552 23 11 1 1223344 3
Q ss_pred ceEEEecCCCCcccccccCCCc--eEEEEeeeEEEEEeCCCCcCC-CcccccCCccccccccCCCcceeeeecCCccccc
Q 016948 170 AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVP 246 (380)
Q Consensus 170 ~~~lwiG~~gs~t~lH~D~~~n--~~~qv~G~K~~~L~pP~~~~~-Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~ 246 (380)
..++|||++||.|++|+|++.+ |+++|+|+|+|+||||..... +|..
T Consensus 232 ~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~------------------------------ 281 (447)
T 3kv4_A 232 QKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFEC------------------------------ 281 (447)
T ss_dssp SCEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHH------------------------------
T ss_pred eeEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhh------------------------------
Confidence 7899999999999999999875 899999999999999997532 2211
Q ss_pred ccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 247 WCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 247 ~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
|.. . ..+.+.|+... ..++++|+|+|||+||||+||||+|.|+++ +++|+.||+-..+
T Consensus 282 ~~~-s--------~~~~~~~~~~~-~~~~~~v~l~pGetlfIPsGWwH~V~nled--sIai~~NF~~~~n 339 (447)
T 3kv4_A 282 WSS-S--------SNQNEMFFGDQ-VDKCYKCSVKQGQTLFIPTGWIHAVLTPVD--CLAFGGNFLHSLN 339 (447)
T ss_dssp HHT-C--------SSGGGSCGGGG-SSCCEEEEEETTCEEEECTTCEEEEEESSC--EEEEEEEECCSTT
T ss_pred ccc-C--------cchhhhhcccc-ccceEEEEECCCcEEecCCCCeEEEecCCC--EEEEccccccccC
Confidence 000 0 00112222222 268999999999999999999999999974 7777778876655
No 12
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.84 E-value=3.6e-21 Score=193.43 Aligned_cols=196 Identities=18% Similarity=0.212 Sum_probs=109.3
Q ss_pred CCCCHHHHHHHhhcCCCcEEEECCCC-CCCCcccc-CCCChhhhHhhcCCCCcEEEE-ecCCCCcccccccCCCCCCccc
Q 016948 27 SPPTPLQFLRDYVSQNKPCIIKNVSL-HHQWPAFS-LWPHPSYLSKTLSSSPPVSVH-LSPNGRADSLVTLTHPRSGEIS 103 (380)
Q Consensus 27 ~~~s~~~F~~~yv~~~~PvVi~g~~~-~~~WpA~~-~Wt~~~yL~~~~G~~~~V~v~-~~~~~~~d~~~~~~~~~~g~~~ 103 (380)
..+|.++|+++|+. ++|+||++... . |+++. .|+. ++|.+..+.. .+.-. +.-....+ | .
T Consensus 24 ~~is~e~F~~~yw~-kkPllIr~~~~~~--~~~f~~l~s~-~~L~~La~~~-~v~~~~v~~~r~~~----------g--~ 86 (442)
T 2xdv_A 24 SPIKTETFFKEFWE-QKPLLIQRDDPAL--ATYYGSLFKL-TDLKSLCSRG-MYYGRDVNVCRCVN----------G--K 86 (442)
T ss_dssp TTSCHHHHHHHTTT-TSCEEECCCCHHH--HHHHHHHCCH-HHHSSCC--------------------------------
T ss_pred cCCCHHHHHHHhhh-hCcEEeecCCcch--hhhhcCcCCH-HHHHHHHccC-cccccccceeeecC----------C--c
Confidence 35899999999996 79999998654 5 88885 5676 9998887754 32210 00000000 0 0
Q ss_pred ccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccchhhhhhhCCCCCceEEEecCCCCcc-
Q 016948 104 QCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSET- 182 (380)
Q Consensus 104 ~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip~~~~~~~~~~~~~~lwiG~~gs~t- 182 (380)
+.... .....++.++.+.+.. .+..+-+.+ +....|.|.. +. .-....+|. ....|+|+|++|+.+
T Consensus 87 ~~~~~-~~g~~~~~~l~~~~~~---~g~tL~l~~----~~~~~p~L~~-l~---~~l~~~~g~-~~~~n~y~~~~g~~g~ 153 (442)
T 2xdv_A 87 KKVLN-KDGKAHFLQLRKDFDQ---KRATIQFHQ----PQRFKDELWR-IQ---EKLECYFGS-LVGSNVYITPAGSQGL 153 (442)
T ss_dssp -----------------CCEEE---ETTEEEEEC----GGGTCHHHHH-HH---HHHHHHHTS-CCEEEEEEECTTCBCS
T ss_pred ceeec-CCCccCHHHHHHHhcc---CCcEEEeCc----hhhhhhHHHH-HH---HHHHHHhCC-CcccceEECCCCCCCc
Confidence 00000 0001111111111011 011121111 1111233321 10 001123454 467899999999986
Q ss_pred cccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCccccchh
Q 016948 183 SFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPETRESE 262 (380)
Q Consensus 183 ~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~~~~~~d 262 (380)
++|||.++||++||.|+|+|+||+|... + +. . +++|+ ++
T Consensus 154 ~~H~D~~dvf~~Qv~G~Krw~l~~p~~p--l-----~~---------~-----------------~s~d~--------~~ 192 (442)
T 2xdv_A 154 PPHYDDVEVFILQLEGEKHWRLYHPTVP--L-----AR---------E-----------------YSVEA--------EE 192 (442)
T ss_dssp CSEECSSEEEEEEEESCEEEEEECCSST--T-----CS---------S-----------------CEECC--------TT
T ss_pred cceECCcceEEEEEEeEEEEEEccCCCC--c-----cc---------c-----------------CCCCc--------hh
Confidence 8999999999999999999999999752 1 11 0 01221 11
Q ss_pred hccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 263 MAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 263 ~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
+ + +...++++|+|||+||||+||||+|++++
T Consensus 193 --~---~--~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 193 --R---I--GRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp --T---S--CSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred --h---c--CCcceEEEECCCcEEEECCCceEEEEecC
Confidence 1 2 25679999999999999999999999985
No 13
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=99.83 E-value=7.8e-20 Score=183.62 Aligned_cols=104 Identities=17% Similarity=0.310 Sum_probs=77.8
Q ss_pred hhCCCCCceEEEecCCCCcc-cccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCC
Q 016948 163 ALGCYPEAVNLWIGNQLSET-SFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEP 241 (380)
Q Consensus 163 ~~~~~~~~~~lwiG~~gs~t-~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p 241 (380)
.||. ....|+|++++|+.+ ++|+|.++||++||.|+|+|+|++|.+...+++.. .
T Consensus 159 ~fg~-~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~------------~----------- 214 (489)
T 4diq_A 159 QFGS-MAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALT------------S----------- 214 (489)
T ss_dssp HHTS-CEEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSS------------C-----------
T ss_pred HhCC-cccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCc------------c-----------
Confidence 4554 457899999999874 89999999999999999999999998765443321 0
Q ss_pred cccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEe
Q 016948 242 VRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNY 311 (380)
Q Consensus 242 ~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~ 311 (380)
..|+ ..++ . +...++++|+|||+||||+||||+|++++++.++++++++
T Consensus 215 -------~~~~------~~~~------~--~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~ 263 (489)
T 4diq_A 215 -------SPNF------SQDD------L--GEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLST 263 (489)
T ss_dssp -------CCCC------CGGG------C--CCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEE
T ss_pred -------cccC------Cccc------c--cCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecc
Confidence 0111 0111 1 2578999999999999999999999999754455555554
No 14
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.78 E-value=2e-18 Score=173.74 Aligned_cols=215 Identities=19% Similarity=0.239 Sum_probs=133.6
Q ss_pred CCHHHHHHHhhcCC------CcEEEEC---CCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCC
Q 016948 29 PTPLQFLRDYVSQN------KPCIIKN---VSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS 99 (380)
Q Consensus 29 ~s~~~F~~~yv~~~------~PvVi~g---~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~ 99 (380)
.+-.+|...|...+ +|++|++ +... -|. ...+. +.+.+..|..+.|.|--..+
T Consensus 151 ~dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~--~P~-~~ftv-~dV~~~vG~d~~VdVIDV~t-------------- 212 (528)
T 3pur_A 151 EDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMT--MPK-PGFDL-EDVVKIMGSDYEVDTIDVYN-------------- 212 (528)
T ss_dssp EEHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCC--CCC-TTCCH-HHHHHHHCTTCEEEEEETTT--------------
T ss_pred cCchhhHHHHHhhcCcccCCeeEEEeccccCCCC--CCC-CCCCH-HHHHHhhCCCceEeeEECCC--------------
Confidence 35777887776543 6999995 3333 443 14565 88899998665888752111
Q ss_pred CcccccccccccccCChHHHHHHHHccCCCCcccccccccc----cchh--hhhhhcccccccchhhhhh----------
Q 016948 100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQND----CFRD--EYSVLGSDCDEHIAWATEA---------- 163 (380)
Q Consensus 100 g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~----~l~~--e~p~L~~Di~~~ip~~~~~---------- 163 (380)
+ ....|+|++|++++.+.......+++-+..- .+.. +.|.+..++ .|.+.+
T Consensus 213 Q---------~~~~mtl~~~~~yf~~~~~R~~i~NviSLEfS~~~~L~~~v~~P~~Vr~l----d~v~~~Wp~~~~~~~~ 279 (528)
T 3pur_A 213 Q---------STYSMKLDTFRKLFRDTKNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEI----SMVNRLWPDVSGAEYI 279 (528)
T ss_dssp T---------EEEEEEHHHHHHHHHCCSCCSSCEEECCEECTTSTTHHHHSCCCHHHHHH----CHHHHHSCCC------
T ss_pred C---------CCCcCcHHHHHHHhcCccccceeeEEeeEEecCchhhhccccCCcEEecc----cHHHHhcCcccchhhh
Confidence 1 2467999999999987533334455544210 0111 123333322 111111
Q ss_pred --------h--CCCC-CceEEEecCCCCcccccccCCC--ceEEEEeeeEEEEEeCCCCcCC-CcccccCCccccccccC
Q 016948 164 --------L--GCYP-EAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHR-MYIRQYPAAHYSYSRVN 229 (380)
Q Consensus 164 --------~--~~~~-~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~G~K~~~L~pP~~~~~-Ly~~~~p~~~~~~~~~~ 229 (380)
+ ...| ...+++||++||.|.+|+|+.. +|++++.|+|+|+||||..... +|.. +..
T Consensus 280 ~~~~~~~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~------w~~---- 349 (528)
T 3pur_A 280 KLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQA------HET---- 349 (528)
T ss_dssp -------CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHH------HHH----
T ss_pred hhhhcccccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhh------hcc----
Confidence 0 0122 3588999999999999999966 6999999999999999986432 3321 000
Q ss_pred CCcceeeeecCCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEE
Q 016948 230 DVERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIAL 309 (380)
Q Consensus 230 ~~~~~~~~~d~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsv 309 (380)
+ +. ...| |+.... ...++|+|+|||+||||+||||+|.|++| +++|+.
T Consensus 350 --s--------~~-~~~w------------------fgd~l~-~~~~~v~l~pGEtlfIPsGW~HaV~tleD--SIaigg 397 (528)
T 3pur_A 350 --S--------PD-TTTW------------------FGDIAN-GAVKRVVIKEGQTLLIPAGWIHAVLTPVD--SLVFGG 397 (528)
T ss_dssp --S--------SC-CSCC------------------GGGGTT-TCCEEEEEETTCEEEECTTCEEEEEEEEE--EEEEEE
T ss_pred --C--------Cc-hhhh------------------hccccc-ccEEEEEECCCCEEEecCCceEEEecCCC--eEEEcC
Confidence 0 00 0011 111111 45679999999999999999999999974 677777
Q ss_pred EeeecCC
Q 016948 310 NYWYDMQ 316 (380)
Q Consensus 310 n~w~~~~ 316 (380)
||--..+
T Consensus 398 NFl~~~n 404 (528)
T 3pur_A 398 NFLHLGN 404 (528)
T ss_dssp EECCGGG
T ss_pred cccchhh
Confidence 7765444
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.40 E-value=1.3e-13 Score=133.28 Aligned_cols=243 Identities=13% Similarity=0.135 Sum_probs=129.0
Q ss_pred HHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCCCcccccccccc
Q 016948 31 PLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAH 110 (380)
Q Consensus 31 ~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~g~~~~~f~~~~ 110 (380)
...|.+ +++.++|||++|+... .. ...|++ ++|.+.+|+. .+.+--+.+ ..
T Consensus 24 ~~~Fq~-hW~~GePViVs~V~~~--~~-~~~W~P-e~~~~~~gd~-~~~lidC~~-----------------------~~ 74 (392)
T 2ypd_A 24 WKLFKE-CWKQGQPAVVSGVHKK--MN-ISLWKA-ESISLDFGDH-QADLLNCKD-----------------------SI 74 (392)
T ss_dssp HHHHHH-HHTTTCCEEECCHHHH--SC-GGGGSH-HHHHHHHTTS-CCCCEETTT-----------------------CC
T ss_pred HHHHHH-HHhCCCcEEEechhhh--Cc-CCccCH-HHHHHHhcCc-eeeeeeCCC-----------------------Cc
Confidence 456754 6788999999998776 33 347999 9999999988 654421111 12
Q ss_pred cccCChHHHHHHHHccCC-------CCcccccccccc--cchhhhhhhcccccccchhhhhh-----hC----------C
Q 016948 111 VERLPFDEALQLVSNSKN-------GDVVAYLQQQND--CFRDEYSVLGSDCDEHIAWATEA-----LG----------C 166 (380)
Q Consensus 111 ~~~m~~~efl~~~~~~~~-------~~~~~Yl~~~~~--~l~~e~p~L~~Di~~~ip~~~~~-----~~----------~ 166 (380)
...+++++|.+-+..... ....+-|.+|.. .+.+.+|...+|+-..+|+.+.. ++ +
T Consensus 75 ~~~i~v~~Ff~Gf~~~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~G~LNLAs~LP~~~~k 154 (392)
T 2ypd_A 75 ISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVR 154 (392)
T ss_dssp BCSCCHHHHHHTSSBGGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTTCTTCCTTTSCGGGCC
T ss_pred cccCcHHHHhhhccccccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCCccchHHHhCCCCCCC
Confidence 467889999986654321 113444666532 22233566666665455643221 11 1
Q ss_pred CCCceEEEecCC--------CCcccccccCCCceEEEEeee--------------------------------------E
Q 016948 167 YPEAVNLWIGNQ--------LSETSFHKDHYENLYTVVSGQ--------------------------------------K 200 (380)
Q Consensus 167 ~~~~~~lwiG~~--------gs~t~lH~D~~~n~~~qv~G~--------------------------------------K 200 (380)
..-.+.+||+-+ -+.|.||+|..+..++++.-. -
T Consensus 155 PDLGPK~YiAYG~~~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~r~~~~~~~~GA 234 (392)
T 2ypd_A 155 PDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGA 234 (392)
T ss_dssp ---CCEEEEECCSTTTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCHHHHHHHHHTSCCCHHHHHHHTCTTCCEEE
T ss_pred CCCCcchhhhcCcchhcccCCCcceeeeehhhhhhhhheecccCccccchhhhhhhhhhhccccHHHhhhccCCCCCCCc
Confidence 113456676332 257999999998544444322 2
Q ss_pred EEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCccccchhhccCCCCCCCCCCeEEEE
Q 016948 201 HFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTV 280 (380)
Q Consensus 201 ~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L 280 (380)
.|-+|.+.+.+.|-. | ...+..+ +.+.+ ....-+.-.-..|...+..+--.+.| +.+++++++
T Consensus 235 lW~Ifr~~D~~klr~--~-----L~~~~~e---~~~~~--~~~~dPihdq~~yL~~~~r~~L~ee~-----gv~~~~~~Q 297 (392)
T 2ypd_A 235 LWHIYAGKDVDKIRE--F-----LQKISKE---QGLEV--LPEHDPIRDQSWYVNKKLRQRLLEEY-----GVRTCTLIQ 297 (392)
T ss_dssp EEEEECGGGHHHHHH--H-----HHHHHHH---HC--------CCHHHHTCCCCCHHHHHHHHHHH-----CCCCEEEEE
T ss_pred eeeeeCHhhHHHHHH--H-----HHHHHHh---hCCCc--cCCCCcCcCCCEEecHHHHHHHHHhc-----CCeeEEEEE
Confidence 344444444433210 0 0000000 00000 00000111112232111010001222 589999999
Q ss_pred cCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCChhhHH
Q 016948 281 NAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFDIKYAY 323 (380)
Q Consensus 281 ~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~~~~~~ 323 (380)
++||++|||+||+|||+|+.+ +++|+.|| -....+..|+
T Consensus 298 ~~GeavfiPaG~~HQV~Nl~~--~i~va~df--~spe~~~~c~ 336 (392)
T 2ypd_A 298 FLGDAIVLPAGALHQVQNFHS--CIQVTEDF--VSPEHLVESF 336 (392)
T ss_dssp ETTCEEEECTTCEEEEEESSE--EEEEEEEE--CCGGGHHHHH
T ss_pred cCCCEEEecCCCHHHHhcccc--hhhHhhhh--cChhhHHHHH
Confidence 999999999999999999962 44444454 4444455554
No 16
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.95 E-value=2.5e-05 Score=74.83 Aligned_cols=109 Identities=13% Similarity=0.195 Sum_probs=70.6
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEEe-eeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVS-GQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~-G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~ 245 (380)
..++|+||..|+.|++|.+..+ .++.++- |.|.|..+|++....+.. + .. ..+ +++- .+.
T Consensus 201 n~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~--l-----~~----k~~---~d~~---~~~ 263 (332)
T 2xxz_A 201 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISA--F-----CD----RHG---VDYL---TGS 263 (332)
T ss_dssp TSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHH--H-----HH----HTT---CCTT---TSC
T ss_pred ChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHH--H-----HH----hcC---Cchh---hce
Confidence 5688999999999999998754 4444444 889999999986544310 0 00 000 0000 000
Q ss_pred cccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEe
Q 016948 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNY 311 (380)
Q Consensus 246 ~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~ 311 (380)
-| .++ .++.+ .+.+.+.++++|||.+++++|-+|+|.|.+ -.+++|+|+
T Consensus 264 ~~------~~p----~~L~~-----~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G--~~~n~awN~ 312 (332)
T 2xxz_A 264 WW------PIL----DDLYA-----SNIPVYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNV 312 (332)
T ss_dssp BC------CCH----HHHHH-----TTCCCEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEE
T ss_pred ec------CCH----HHHHh-----CCCCeEEEEECCCCEEEECCCceEEEEecc--eeeEEEEEe
Confidence 11 111 12333 247889999999999999999999999984 245666665
No 17
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=97.66 E-value=3.6e-05 Score=74.18 Aligned_cols=115 Identities=18% Similarity=0.287 Sum_probs=74.7
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEEeee-EEEEEeCCCCcCCCcc---cccCCccccccccCCCcceeeeecCCc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQ-KHFLLLPPTDVHRMYI---RQYPAAHYSYSRVNDVERFTLELEEPV 242 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~G~-K~~~L~pP~~~~~Ly~---~~~p~~~~~~~~~~~~~~~~~~~d~p~ 242 (380)
..++|+||..+|.+.+|.+..+ .++-+..|. |.|..+|+++...+-. ..+|.. + . .-..|- .
T Consensus 176 ntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~-~-~----~c~~fL---~--- 243 (354)
T 3dxt_A 176 NTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGS-S-R----GCGAFL---R--- 243 (354)
T ss_dssp CCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHH-H-H----HCTTGG---G---
T ss_pred cceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchh-h-h----hcHHHH---h---
Confidence 5678999999999999999854 667777887 9999999998643210 000000 0 0 000000 0
Q ss_pred ccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
... ..+.| + .+.+ .+.+.+.++++|||.+++-++.||.+.|.+ -.++.||||-
T Consensus 244 h~~--~lisP----~----~L~~-----~GIpv~~~vQ~pGEfViTfP~aYH~gfn~G--fn~aEAvNFA 296 (354)
T 3dxt_A 244 HKV--ALISP----T----VLKE-----NGIPFNRITQEAGEFMVTFPYGYHAGFNHG--FNCAEAINFA 296 (354)
T ss_dssp GCC--EEECH----H----HHHH-----TTCCCEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEC
T ss_pred cCc--ccCCH----H----HHHH-----CCCceEEEEeCCCcEEEECCCceEEEeecc--ccHhHhhccC
Confidence 000 00111 0 1232 358899999999999999999999999985 3567777773
No 18
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=97.60 E-value=0.00019 Score=71.97 Aligned_cols=110 Identities=13% Similarity=0.213 Sum_probs=70.8
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEE-eeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVV-SGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv-~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~ 245 (380)
..+.|+||..|+.|++|.+..+ .++.++ =|.|.|...|++....+-. +.. ..+ +++- .+
T Consensus 235 NtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~-------l~~----k~~---~d~l---~~- 296 (510)
T 4ask_A 235 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISA-------FCD----RHG---VDYL---TG- 296 (510)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHH-------HHH----HTT---CCTT---TS-
T ss_pred ChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHH-------HHH----HhC---cchh---hc-
Confidence 5678999999999999998844 455555 4699999999986543210 000 000 0000 00
Q ss_pred cccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 246 ~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
.| ++++ .++.+ .+.+.+.++++|||.+++++|-+|.|.|.+ -..+||.|+=
T Consensus 297 ~~-----~psp----e~L~k-----agIPvyr~iQkPGdfVit~PgtyH~Vqs~G--f~~niaWNva 347 (510)
T 4ask_A 297 SW-----WPIL----DDLYA-----SNIPVYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNVG 347 (510)
T ss_dssp CB-----CCCH----HHHHH-----TTCCCEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEC
T ss_pred cc-----cCCH----HHHHh-----CCCCeEEEEECCCCEEEECCCceEEEEecC--eeeeeEEEec
Confidence 11 1111 12333 247889999999999999999999999984 1346666653
No 19
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.54 E-value=0.00032 Score=71.17 Aligned_cols=110 Identities=14% Similarity=0.188 Sum_probs=70.5
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEEe-eeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVS-GQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYV 245 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~-G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~ 245 (380)
..++|+||..|+.|++|.+... .++.++- |.|.|..+|.+....+.. + .. ..+ +++ ....
T Consensus 260 n~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e~--l-----~~----k~~---~~~---~~~~ 322 (531)
T 3avr_A 260 NTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLND--F-----CE----KNN---LNF---LMGS 322 (531)
T ss_dssp SSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHH--H-----HH----HTT---CCT---TTSC
T ss_pred ChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHHH--H-----HH----HcC---CCh---hhce
Confidence 5688999999999999999854 3444444 689999999987543211 0 00 000 000 0001
Q ss_pred cccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 246 PWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 246 ~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
.|. ++ .++.+ .+.+.+.++++|||.+++++|-+|+|.|.+ -.+++|+||=
T Consensus 323 ~~~------~p----~~L~~-----~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a 372 (531)
T 3avr_A 323 WWP------NL----EDLYE-----ANVPVYRFIQRPGDLVWINAGTVHWVQAIG--WCNNIAWNVG 372 (531)
T ss_dssp BCC------CH----HHHHH-----TTCCCEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEC
T ss_pred eec------CH----HHHHh-----CCCCeEEEEECCCCEEEECCCceEEEEecc--eeeeeEEEec
Confidence 111 01 12322 247789999999999999999999999984 2445566663
No 20
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=97.44 E-value=0.00012 Score=71.06 Aligned_cols=114 Identities=19% Similarity=0.312 Sum_probs=72.0
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEEeee-EEEEEeCCCCcCCCcc---cccCCccccccccCCCcceeeeecCCc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQ-KHFLLLPPTDVHRMYI---RQYPAAHYSYSRVNDVERFTLELEEPV 242 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~G~-K~~~L~pP~~~~~Ly~---~~~p~~~~~~~~~~~~~~~~~~~d~p~ 242 (380)
..++|++|..+|.+.+|.+..+ .++-+..|. |.|..+|+++...+.. ..+|.. +. ....+ +
T Consensus 219 ntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~-~~-----~c~~f---L---- 285 (373)
T 3opt_A 219 NDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEE-AK-----NCPEF---L---- 285 (373)
T ss_dssp -CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHH-HS-----SCSSC---T----
T ss_pred chhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhh-hh-----hCHHH---h----
Confidence 4678999999999999998754 555555564 9999999987643210 001100 00 00000 0
Q ss_pred ccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEe
Q 016948 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNY 311 (380)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~ 311 (380)
.. ....+.| ..+.+ .+.+.+.++++|||.+++=++-||.+.|.+ -.++.||||
T Consensus 286 ~h-~~~lisP--------~~L~~-----~GIpv~r~vQ~pGEfViTfP~aYH~gfn~G--fn~aEAvNF 338 (373)
T 3opt_A 286 RH-KMFLASP--------KLLQE-----NGIRCNEIVHHEGEFMITYPYGYHAGFNYG--YNLAESVNF 338 (373)
T ss_dssp TT-SCEEECH--------HHHHT-----TTCCCEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEE
T ss_pred hC-CcccCCH--------HHHHh-----cCCceEEEEECCCCEEEECCCceEEEEecC--ccHHHHHcc
Confidence 00 0001111 01222 358899999999999999999999999985 357778887
No 21
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=97.10 E-value=0.00043 Score=67.53 Aligned_cols=115 Identities=18% Similarity=0.241 Sum_probs=72.4
Q ss_pred CceEEEecCCCCcccccccCCC--ceEEEEee-eEEEEEeCCCCcCCCcc---cccCCccccccccCCCcceeeeecCCc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE--NLYTVVSG-QKHFLLLPPTDVHRMYI---RQYPAAHYSYSRVNDVERFTLELEEPV 242 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~--n~~~qv~G-~K~~~L~pP~~~~~Ly~---~~~p~~~~~~~~~~~~~~~~~~~d~p~ 242 (380)
..++|+||..+|.+.+|.+..+ .++.+..| .|.|..+|+++...+-. ..+|.. +. ....+-
T Consensus 194 n~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~-~~-----~~~~~L------- 260 (381)
T 2ox0_A 194 NTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGS-AQ-----SCEAFL------- 260 (381)
T ss_dssp TSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHH-HH-----HCTTGG-------
T ss_pred ccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhh-hh-----cchHHh-------
Confidence 5678999999999999998754 45555455 79999999987644311 000100 00 000000
Q ss_pred ccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
... ...+.| ..+.+ .+.+.+.++++|||.+++=++-||.+.|.+ -.++.||||-
T Consensus 261 ~h~-~~~isP--------~~L~~-----~GIpv~r~vQ~pGEfViTfP~aYH~gfn~G--fN~aEAvNFA 314 (381)
T 2ox0_A 261 RHK-MTLISP--------LMLKK-----YGIPFDKVTQEAGEFMITFPYGYHAGFNHG--FNCAESTNFA 314 (381)
T ss_dssp GGS-CEEECH--------HHHHH-----TTCCCEEEEECTTCEEEECTTCEEEEEECS--SEEEEEEEEC
T ss_pred hcc-ccccCH--------HHHHH-----CCCceEEEEecCCCEEEECCCcEEEeecCc--ccHHHHhccC
Confidence 000 001111 01332 358899999999999999999999999985 3566777763
No 22
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=95.16 E-value=0.056 Score=41.64 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-..+|+|||++|+|++-.|.++|..+
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEEcCCCEEEeCCCCcccCEeCCC
Confidence 35689999999999999999999864
No 23
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.14 E-value=0.086 Score=47.17 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=58.3
Q ss_pred EEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccC
Q 016948 172 NLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVN 251 (380)
Q Consensus 172 ~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd 251 (380)
.+..=.+|..|+.|-....-++.+++|+=+-.+|..... |.. +
T Consensus 82 ~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~---------------------g~~-l--------------- 124 (208)
T 2gm6_A 82 VSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGS---------------------GRP-V--------------- 124 (208)
T ss_dssp EEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTT---------------------SCE-E---------------
T ss_pred EEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCC---------------------Ccc-c---------------
Confidence 333446789999998776667889999987777632211 000 0
Q ss_pred CCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCC--CceeeeeecCCCCCeEEEEEeee
Q 016948 252 PYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPS--MWFHHVRQSPDDNGYTIALNYWY 313 (380)
Q Consensus 252 ~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~--gWwH~V~~l~d~~~~sIsvn~w~ 313 (380)
...-+.+|.|||+.++++ |..|.|.|... .+.+|+++...
T Consensus 125 ---------------------~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~-~~~avsLHvY~ 166 (208)
T 2gm6_A 125 ---------------------LHGEPTRLEPGHVEAVSPTVGDIHRVHNAYD-DRVSISIHVYG 166 (208)
T ss_dssp ---------------------ECSCCEEECTTCEEEEBTTTBCCEEEEESCS-SSCEEEEEEES
T ss_pred ---------------------cccceEEeCCCCEEEECCCCCCeEEeccCCC-CCcEEEEEEEc
Confidence 112346899999999999 99999998731 46899998753
No 24
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=95.05 E-value=0.059 Score=54.31 Aligned_cols=25 Identities=20% Similarity=0.470 Sum_probs=22.2
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeec
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.+..+|++||++|||+|+.|.+.|.
T Consensus 382 ~~~~~l~~GDv~viP~G~~H~~~ng 406 (476)
T 1fxz_A 382 VFDGELQEGRVLIVPQNFVVAARSQ 406 (476)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEEC
T ss_pred EeeeEEcCCCEEEECCCCeEEEEeC
Confidence 3556899999999999999999993
No 25
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=94.73 E-value=0.18 Score=44.10 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=28.2
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeee
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWY 313 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~ 313 (380)
.....|+|||+++||++.+|...|.++ +...-+.++.
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~g~--~~~~~l~v~~ 154 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNIGD--EPFIFLAIYP 154 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECSS--SCEEEEEEEE
T ss_pred EEEEEECCCcEEEECCCCeEEEEECCc--ccEEEEEEEC
Confidence 356799999999999999999999863 3344444443
No 26
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=94.72 E-value=0.061 Score=46.72 Aligned_cols=25 Identities=4% Similarity=0.070 Sum_probs=22.6
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+|++||++|||+|..|...|.++
T Consensus 84 ~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 84 TYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEETTEEEEECTTCCEEEEECCS
T ss_pred EEEECCCCEEEECCCCeEEEEeCCC
Confidence 3589999999999999999999864
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=94.66 E-value=0.064 Score=54.38 Aligned_cols=25 Identities=12% Similarity=0.323 Sum_probs=22.1
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeec
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.+..+|++||++|||+|+.|.+.|.
T Consensus 416 ~~~~~l~~GDv~viP~G~~H~~~Ng 440 (510)
T 3c3v_A 416 VYDEELQEGHVLVVPQNFAVAGKSQ 440 (510)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEEC
T ss_pred EEeEEEcCCcEEEECCCCeEEEEeC
Confidence 3556899999999999999999993
No 28
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=94.58 E-value=0.19 Score=40.22 Aligned_cols=25 Identities=20% Similarity=0.133 Sum_probs=22.6
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+..|++||+++||++-.|.+.|.++
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEeCCCCEEEECCCCEEEeEeCCC
Confidence 4689999999999999999999864
No 29
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=94.56 E-value=0.062 Score=53.88 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=48.5
Q ss_pred EEEecCCCCcccccccCC-CceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccccc
Q 016948 172 NLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (380)
Q Consensus 172 ~lwiG~~gs~t~lH~D~~-~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~v 250 (380)
.+-+. +|+...+|+.+. +-|+.+++|+=++.++.+..
T Consensus 326 ~v~l~-pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g----------------------------------------- 363 (459)
T 2e9q_A 326 RGVLY-SNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG----------------------------------------- 363 (459)
T ss_dssp EEEEC-TTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-----------------------------------------
T ss_pred EEEee-CCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-----------------------------------------
Confidence 34443 456778899884 47899999998888865431
Q ss_pred CCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 251 d~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.+.+..+|++||++|||.|+.|.+.|.
T Consensus 364 ----------------------~~~~~~~l~~GDv~v~P~G~~H~~~ng 390 (459)
T 2e9q_A 364 ----------------------QSVFDGEVREGQVLMIPQNFVVIKRAS 390 (459)
T ss_dssp ----------------------CEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred ----------------------CEEEeeEEeCCcEEEECCCCEEEEEeC
Confidence 223456899999999999999999994
No 30
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=94.52 E-value=0.13 Score=45.37 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=27.5
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
+..+|++||+++||+|.+|..+|.++ +....+.+.
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~--~~~~~l~v~ 153 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGK--TEAYMVVSF 153 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSS--SCEEEEEEE
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCC--CCEEEEEEE
Confidence 46799999999999999999999864 344444443
No 31
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=94.46 E-value=0.074 Score=51.73 Aligned_cols=27 Identities=22% Similarity=0.369 Sum_probs=24.3
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.-++.+++||++++|+|.||++.|.++
T Consensus 141 G~~~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 141 GDPVRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred CEEEEEeCCCEEEECCCCcEEeEeCCC
Confidence 467899999999999999999999764
No 32
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=94.35 E-value=0.12 Score=49.69 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=22.1
Q ss_pred EEEcCCCeEeeCCCceeeeeecCC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..|++||++|||+|.+|...|.++
T Consensus 98 ~~l~~GD~~~ip~g~~H~~~n~~~ 121 (361)
T 2vqa_A 98 ADVDKGGLWYFPRGWGHSIEGIGP 121 (361)
T ss_dssp EEEETTEEEEECTTCEEEEEECSS
T ss_pred EEEcCCCEEEECCCCeEEEEeCCC
Confidence 589999999999999999999864
No 33
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=94.34 E-value=0.14 Score=50.25 Aligned_cols=26 Identities=12% Similarity=0.176 Sum_probs=23.3
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.-++.+++||++|||++.||++.|.+
T Consensus 331 ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 331 GKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEECC
T ss_pred CEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 35689999999999999999999974
No 34
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=94.33 E-value=0.18 Score=42.82 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=22.5
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+|+|||++|||++-+|.+.|..+
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~n~g~ 107 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFRANRG 107 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4589999999999999999999864
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=94.27 E-value=0.35 Score=41.37 Aligned_cols=24 Identities=8% Similarity=0.243 Sum_probs=22.1
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||++|||++-+|.+.|..
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 468999999999999999999985
No 36
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.22 E-value=0.14 Score=48.94 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=24.8
Q ss_pred eEEEecCCCCcccccccCCC-ceEEEEeeeEEEEEe
Q 016948 171 VNLWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLL 205 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~ 205 (380)
.++....+|+...+|+.... -++..|+|+=++.|.
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~ 309 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFR 309 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEE
Confidence 44555667777888887644 468888888777775
No 37
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=94.13 E-value=0.44 Score=40.12 Aligned_cols=26 Identities=23% Similarity=0.177 Sum_probs=23.4
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.-+..|++||+++||++-.|.++|.+
T Consensus 87 ~~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 87 PQEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp CEEEEECTTEEEEECTTCCEEEECCC
T ss_pred cEEEEeCCCCEEEECCCCcEEeEeCC
Confidence 35679999999999999999999975
No 38
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=94.05 E-value=0.091 Score=53.27 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=48.2
Q ss_pred eEEEecCCCCcccccccCC-CceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~-~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..+-+.+ |+..++|+.+. +-|+.++.|+=++.++.+..
T Consensus 397 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G---------------------------------------- 435 (531)
T 3fz3_A 397 ERGFFYR-NGIYSPHWNVNAHSVVYVIRGNARVQVVNENG---------------------------------------- 435 (531)
T ss_dssp EEEEECT-TCEEEEEEESSCCEEEEEEEEEEEEEEECTTS----------------------------------------
T ss_pred EEEEeec-CccccceEcCCCCEEEEEEeCcEEEEEEeCCC----------------------------------------
Confidence 3455554 55667899885 57899999999888865431
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.+.+..+|++||++|||.|+.|...+.
T Consensus 436 -----------------------~~v~~~~L~~GDV~v~P~G~~H~~~ag 462 (531)
T 3fz3_A 436 -----------------------DAILDQEVQQGQLFIVPQNHGVIQQAG 462 (531)
T ss_dssp -----------------------CEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred -----------------------cEEEEEEecCCeEEEECCCCeEEEecC
Confidence 123567999999999999999976643
No 39
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=93.91 E-value=0.29 Score=38.59 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=21.2
Q ss_pred EEcCCCeEeeCCCceeeeeecCC
Q 016948 279 TVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 279 ~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.|+|||+++||++-.|.+.|.++
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSS
T ss_pred EeCCCCEEEECCCCcEEeEcCCC
Confidence 79999999999999999999753
No 40
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=93.73 E-value=0.36 Score=38.50 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=22.0
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||+++||++-.|.+.|.+
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~ 103 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRARTFE 103 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEECCT
T ss_pred EEEeCCCCEEEECCCCcEEeEECC
Confidence 358999999999999999999985
No 41
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=93.67 E-value=0.44 Score=36.77 Aligned_cols=25 Identities=20% Similarity=0.352 Sum_probs=22.2
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
...|+|||+++||++-.|...|.++
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~ 87 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGD 87 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCC
Confidence 3589999999999999999999754
No 42
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=93.58 E-value=0.2 Score=48.01 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=23.4
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
...+|++||+++||++.+|...|.++
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCSS
T ss_pred EEEEECCCCEEEECCCCeEEeEECCC
Confidence 46799999999999999999999864
No 43
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=93.56 E-value=0.33 Score=43.48 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=58.9
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~v 250 (380)
+.+..=++|..|+.|-.....++.+++|+=+-..|.......+
T Consensus 75 v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~------------------------------------- 117 (211)
T 3uss_A 75 VVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRP------------------------------------- 117 (211)
T ss_dssp EEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCE-------------------------------------
T ss_pred EEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCc-------------------------------------
Confidence 3344457788999998776678999999987777542211000
Q ss_pred CCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCC--ceeeeeecCCCCCeEEEEEeeec
Q 016948 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSM--WFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 251 d~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~g--WwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
. ...-+.+|.+||+.+++++ ..|+|.|... ++.+||++..-.
T Consensus 118 -------------~--------~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~-d~~avSLHvYg~ 161 (211)
T 3uss_A 118 -------------H--------PSGARRRLEPGEVEALSPRIGDVHQVSNAFS-DRTSISIHVYGA 161 (211)
T ss_dssp -------------E--------ECSCCEEECTTCEEEEBTTTBCCEEEEESCS-SSCEEEEEEESS
T ss_pred -------------c--------cccceEEecCCCEEEECCCCCCEEEEccCCC-CCCEEEEEEcCC
Confidence 0 0112368999999999987 9999998731 468999997543
No 44
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=93.46 E-value=0.068 Score=41.69 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=22.5
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+..|.+||.+|||.|-+|+++|..+
T Consensus 60 ~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEecCCcEEEEcCCCcEECEECCC
Confidence 3468999999999999999999975
No 45
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=93.37 E-value=0.4 Score=38.31 Aligned_cols=37 Identities=22% Similarity=0.393 Sum_probs=28.4
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
...|++||+++||++=.|.+.+.++ +....+.++|..
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~~~~--~~~~~~~i~f~~ 109 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVINNNQ--EDFHFYTIWWDK 109 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEECSS--SCEEEEEEEECH
T ss_pred EEEECCCcEEEECCCCcEEeEeCCC--CCEEEEEEEECH
Confidence 4689999999999999999999753 334455566544
No 46
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=93.30 E-value=0.33 Score=41.63 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=22.6
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+|+|||++|||++-+|.+.|..+
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~n~~~ 116 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFRAPAD 116 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEECCTT
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999754
No 47
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=93.12 E-value=0.26 Score=49.70 Aligned_cols=66 Identities=11% Similarity=0.122 Sum_probs=49.9
Q ss_pred eEEEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..+-+.+ |+..++|+.+.. -|..++.|+=++.++.+..
T Consensus 361 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g---------------------------------------- 399 (496)
T 3ksc_A 361 EHGSLHK-NAMFVPHYNLNANSIIYALKGRARLQVVNCNG---------------------------------------- 399 (496)
T ss_dssp EEEEEET-TCEEEEEEESSCCEEEEEEESEEEEEEECTTS----------------------------------------
T ss_pred EEEEeeC-CeEECCeeCCCCCEEEEEEeceEEEEEEeCCC----------------------------------------
Confidence 3455554 567788998754 6899999999998876541
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.+.+..+|++||++|||.|+.|...+..
T Consensus 400 -----------------------~~~f~~~l~~GDV~v~P~G~~H~~~a~~ 427 (496)
T 3ksc_A 400 -----------------------NTVFDGELEAGRALTVPQNYAVAAKSLS 427 (496)
T ss_dssp -----------------------CEEEEEEEETTCEEEECTTCEEEEEECS
T ss_pred -----------------------cEEEEEEecCCeEEEECCCCEEEEEeCC
Confidence 1224558999999999999999888763
No 48
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=93.09 E-value=0.14 Score=42.71 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=24.1
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.++..|.|||+++||++-.|.+.|.++
T Consensus 87 ~~~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 87 HFQEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEECSS
T ss_pred eeeEEECCCCEEEECCCCcEEEEECCC
Confidence 367899999999999999999999854
No 49
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=92.83 E-value=0.28 Score=49.14 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=47.9
Q ss_pred eEEEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..+-+.+ |+..++|+.+.. -|..+++|+=++.++.+..
T Consensus 326 a~v~L~p-Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g---------------------------------------- 364 (466)
T 3kgl_A 326 LRGSIRQ-NAMVLPQWNANANAVLYVTDGEAHVQVVNDNG---------------------------------------- 364 (466)
T ss_dssp EEEEEET-TEEEEEEEESSCCEEEEEEESEEEEEEECTTS----------------------------------------
T ss_pred EEEEeec-CcEeeeeECCCCCEEEEEEeceEEEEEEeCCC----------------------------------------
Confidence 3455554 567788998754 6899999999888876541
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeee
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
.+.+..+|++||++|||.|+.|...+
T Consensus 365 -----------------------~~~f~~~l~~GDV~v~P~G~~H~~~a 390 (466)
T 3kgl_A 365 -----------------------DRVFDGQVSQGQLLSIPQGFSVVKRA 390 (466)
T ss_dssp -----------------------CEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred -----------------------cEEEEeEecCCcEEEECCCCeEEEEc
Confidence 12245689999999999999998854
No 50
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=92.78 E-value=0.29 Score=39.59 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=22.3
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+|+|||+++||++-.|...|..+
T Consensus 84 ~~~l~~Gd~~~ip~g~~H~~~~~~~ 108 (134)
T 2o8q_A 84 AVMLEAGGSAFQPPGVRHRELRHSD 108 (134)
T ss_dssp EEEEETTCEEECCTTCCEEEEEECT
T ss_pred EEEecCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999753
No 51
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=92.65 E-value=0.21 Score=50.49 Aligned_cols=24 Identities=17% Similarity=0.423 Sum_probs=21.6
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+..+|++||++|||+|+.|...+.
T Consensus 412 ~~~~l~~GDv~vvP~G~~H~~~n~ 435 (493)
T 2d5f_A 412 FDGELRRGQLLVVPQNFVVAEQGG 435 (493)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEE
T ss_pred EeEEEcCCCEEEECCCCeEeeeeC
Confidence 456899999999999999999885
No 52
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=92.58 E-value=0.65 Score=40.08 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=31.2
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
-+.+|.+||+.+.|++..|+|+|..+ ..+||++....
T Consensus 117 ~~~~l~~G~~~~~~~~~iH~V~N~~~--~~aVSlHvY~p 153 (171)
T 3eqe_A 117 NSYFVHEGECLISTKGLIHKMSNPTS--ERMVSLHVYSP 153 (171)
T ss_dssp EEEEEETTCEEEECTTCEEEEECCSS--SCEEEEEEEES
T ss_pred ceEEeCCCcEEEeCCCCEEEEECCCC--CCEEEEEEeCC
Confidence 45689999999999999999999864 78999987543
No 53
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=92.52 E-value=0.56 Score=40.64 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=53.6
Q ss_pred CceEEEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPW 247 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~ 247 (380)
...++..+.+|+.-.+|+.... -++..++|+=..+++.-...
T Consensus 53 ~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~------------------------------------- 95 (174)
T 3ejk_A 53 GEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREK------------------------------------- 95 (174)
T ss_dssp CEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTT-------------------------------------
T ss_pred eEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCC-------------------------------------
Confidence 3556667788888899987643 57788899888877532110
Q ss_pred cccCCCCCccccchhhccCCCCCCCCCCeEEEEc---CCCeEeeCCCceeeeeecCC
Q 016948 248 CSVNPYPSPETRESEMAKFPLYFNGPKPFECTVN---AGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 248 s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~---pGD~LfiP~gWwH~V~~l~d 301 (380)
-|.| .+...++|. ++-.||||+|+||...++++
T Consensus 96 ------------------SpTf---g~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 96 ------------------SPTS---GRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp ------------------CTTT---TCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred ------------------CCCC---CeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 0222 235677787 67899999999999999963
No 54
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=92.49 E-value=0.43 Score=41.20 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=53.6
Q ss_pred CceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccc
Q 016948 169 EAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWC 248 (380)
Q Consensus 169 ~~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s 248 (380)
...-+++|.++..+.+|+|+.+-++.|+.|.=...+-.. |
T Consensus 34 ~~~V~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~------------------------g---------------- 73 (176)
T 1zvf_A 34 GFTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDE------------------------T---------------- 73 (176)
T ss_dssp SEEEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEEC------------------------S----------------
T ss_pred CEEEEEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcC------------------------C----------------
Confidence 345578999999999999999999999999865544210 0
Q ss_pred ccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 249 SVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 249 ~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
++ +.+..+++|++||+..+|+|--|.-....
T Consensus 74 --~~-------------------~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 74 --DA-------------------EPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp --SS-------------------SCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred --Cc-------------------ccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 00 01246789999999999999999986554
No 55
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=92.44 E-value=0.19 Score=38.20 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=22.5
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
...|++||+++||++-.|.+.+.++
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 92 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRNESA 92 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999753
No 56
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=92.43 E-value=0.53 Score=37.28 Aligned_cols=24 Identities=25% Similarity=0.394 Sum_probs=22.1
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
+.+|+|||+++||++-.|.++|.+
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~~~ 98 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNAIT 98 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEESS
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 468999999999999999999985
No 57
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=92.35 E-value=0.55 Score=36.63 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=21.7
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
...|.|||+++||++-.|.+.+.+
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~~~~~~ 102 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHALYAVE 102 (115)
T ss_dssp EEEEETTCEEEECTTSCEEEEESS
T ss_pred EEEECCCCEEEECCCCCEEEEECC
Confidence 358999999999999999999974
No 58
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=92.34 E-value=0.5 Score=38.01 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=20.9
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
..+|+|||++|||+|-.|...+.
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~~~ 100 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIRSH 100 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEEcC
Confidence 45899999999999999999886
No 59
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=92.27 E-value=0.51 Score=46.23 Aligned_cols=26 Identities=12% Similarity=0.226 Sum_probs=23.5
Q ss_pred eEEEEcCCCeEeeCCCceeeeee-cCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQ-SPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~-l~d 301 (380)
-++.+++||++++|+|.||.+.| .++
T Consensus 162 ~~~~~~~GD~i~~P~g~~H~~~N~~gd 188 (394)
T 3bu7_A 162 HKVELGANDFVLTPNGTWHEHGILESG 188 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECTTC
T ss_pred EEEEEcCCCEEEECcCCCEEEEcCCCC
Confidence 46799999999999999999999 754
No 60
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=92.14 E-value=0.56 Score=42.05 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=29.9
Q ss_pred EEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
.++.|||++|+|+|--|.+++.+ +..+++=.|....
T Consensus 173 ~~l~pGd~v~ipsgv~Ha~rt~d---ePllalwvW~G~~ 208 (217)
T 4b29_A 173 LMLEPGQTRFHPANAPHAMTTLT---DPILTLVLWRGAG 208 (217)
T ss_dssp EEECTTCEEEECTTCCEEEECCS---SCEEEEEEEESTT
T ss_pred EecCCCCEEEcCCCCceeEEECC---ccEEEEEEEeCCC
Confidence 48999999999999999999864 6778777776544
No 61
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=92.09 E-value=0.57 Score=40.61 Aligned_cols=27 Identities=15% Similarity=0.120 Sum_probs=24.3
Q ss_pred CCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 273 PKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 273 ~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+..-+++|+|||.+.||+|-||...+.
T Consensus 116 ~a~~~i~L~pGesvtIppg~~H~f~ag 142 (175)
T 2y0o_A 116 TVWHEIELEPGGQYTIPPNTKHWFQAG 142 (175)
T ss_dssp CCCEEEEECTTCEEEECTTCCEEEEEE
T ss_pred cCCcEEEECCCCEEEECCCCcEEEEeC
Confidence 346789999999999999999999994
No 62
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=92.01 E-value=0.37 Score=46.50 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=21.6
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
-+..+++||++|||++.+|+++|.
T Consensus 306 ~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 306 ETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEE
T ss_pred EEEEEcCCCEEEECCCCeEEEEeC
Confidence 457899999999999999999984
No 63
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=91.96 E-value=0.22 Score=48.09 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-+..|++||++|||++.+|...|.++
T Consensus 139 ~~~~l~~GD~~~iP~g~~H~~~n~~~ 164 (354)
T 2d40_A 139 ERTPMNEGDFILTPQWRWHDHGNPGD 164 (354)
T ss_dssp EEEECCTTCEEEECTTSCEEEECCSS
T ss_pred EEEEEcCCCEEEECCCCcEEeEeCCC
Confidence 35789999999999999999999864
No 64
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=91.90 E-value=0.18 Score=40.03 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=22.1
Q ss_pred EEEcCCCeEeeCCCceeeeeecCC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..|+|||++|||++-.|.+.|.++
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 589999999999999999999864
No 65
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=91.76 E-value=0.2 Score=40.86 Aligned_cols=26 Identities=15% Similarity=0.303 Sum_probs=23.1
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-..+|+|||++++|++-.|...|..+
T Consensus 96 ~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 96 KDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEEEeCCCcEEEECCCCcEEeEECCC
Confidence 35689999999999999999999764
No 66
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=91.69 E-value=0.28 Score=48.46 Aligned_cols=23 Identities=9% Similarity=0.091 Sum_probs=21.4
Q ss_pred EEEcCCCeEeeCCCceeeeeecC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.+|++||+++||+|..|.+.|.+
T Consensus 93 ~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 93 YNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp EEECTTEEEEECTTCEEEEEECC
T ss_pred EEecCCCEEEECCCCeEEEEecC
Confidence 58999999999999999999984
No 67
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=91.63 E-value=1.6 Score=36.51 Aligned_cols=25 Identities=12% Similarity=0.312 Sum_probs=22.2
Q ss_pred EEEEcCCCeEeeCCC-ceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSM-WFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~g-WwH~V~~l~d 301 (380)
+.+|+|||+++||++ -.|.+.|..+
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCceEEeEeCCC
Confidence 468999999999997 9999999754
No 68
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=91.55 E-value=1.3 Score=34.50 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=21.9
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|.|||+++||++-.|.+.+.+
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~ 96 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPT 96 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS
T ss_pred EEEeCCCCEEEECcCCceeeEeCC
Confidence 468999999999999999999974
No 69
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=91.53 E-value=0.34 Score=48.48 Aligned_cols=63 Identities=11% Similarity=0.143 Sum_probs=47.2
Q ss_pred EEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccC
Q 016948 173 LWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVN 251 (380)
Q Consensus 173 lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd 251 (380)
+-+. +|+..++|+.+.. -|..+++|+=++.++.+..
T Consensus 328 v~l~-pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g------------------------------------------ 364 (465)
T 3qac_A 328 GVLY-RNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG------------------------------------------ 364 (465)
T ss_dssp EEEC-TTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS------------------------------------------
T ss_pred EEec-CCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC------------------------------------------
Confidence 4444 4567788988854 6899999999988876531
Q ss_pred CCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 252 PYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 252 ~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.+.+..+|++||+++||.|+.|...+.
T Consensus 365 ---------------------~~~f~~~l~~GDVfvvP~g~~h~~~ag 391 (465)
T 3qac_A 365 ---------------------QSVFDEELSRGQLVVVPQNFAIVKQAF 391 (465)
T ss_dssp ---------------------CEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred ---------------------cEEEEEEecCCeEEEECCCcEEEEEcC
Confidence 123456899999999999999988653
No 70
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=91.52 E-value=0.33 Score=46.99 Aligned_cols=24 Identities=25% Similarity=0.397 Sum_probs=21.8
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||++|||+|.+|.+.|.+
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~ 146 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE 146 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEEEEECC
Confidence 458999999999999999999974
No 71
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=91.32 E-value=1.1 Score=37.10 Aligned_cols=24 Identities=21% Similarity=0.451 Sum_probs=21.8
Q ss_pred EEEcCCCeEeeCCCceeeeeecCC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..|+|||+++||++-.|...|..+
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~ 112 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPD 112 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTT
T ss_pred EEECCCCEEEECCCCcEEeEeCCC
Confidence 479999999999999999999864
No 72
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=91.23 E-value=1.2 Score=37.74 Aligned_cols=25 Identities=20% Similarity=0.214 Sum_probs=22.5
Q ss_pred EEEEcCCCeEeeCCC--ceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSM--WFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~g--WwH~V~~l~d 301 (380)
+.+|++||++|||++ -.|.++|..+
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECCSS
T ss_pred EEEeCCCCEEEECCCCCcceEEEECCC
Confidence 468999999999999 9999999864
No 73
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=91.19 E-value=0.42 Score=46.24 Aligned_cols=26 Identities=27% Similarity=0.303 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.+.+|++||++|||++.+|.+.|.++
T Consensus 301 ~~~~l~~GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 301 RTFNYQAGDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp EEEEEESSCEEEECTTCBEEEEECSS
T ss_pred EEEEEcCCCEEEECCCCeEEEEECCC
Confidence 46789999999999999999999864
No 74
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=91.18 E-value=1.8 Score=38.26 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=57.2
Q ss_pred CCCCcccccccCC-CceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCC
Q 016948 177 NQLSETSFHKDHY-ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPS 255 (380)
Q Consensus 177 ~~gs~t~lH~D~~-~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~ 255 (380)
++|..|+.|-... .-++.+++|+=+-..|..... +.
T Consensus 78 ~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~---------------------~~---------------------- 114 (200)
T 3eln_A 78 GEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDK---------------------KS---------------------- 114 (200)
T ss_dssp CTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCS---------------------SC----------------------
T ss_pred CCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCC---------------------Cc----------------------
Confidence 5788999997663 467889999988777643210 00
Q ss_pred ccccchhhccCCCCCCCCCCeEEEEcCCCeEee-CCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 256 PETRESEMAKFPLYFNGPKPFECTVNAGEILYL-PSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 256 ~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~Lfi-P~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
. + ....-+.+|.|||+.|+ |.+=.|+|.|... ++.+||++....+
T Consensus 115 ------~----~----l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~-~~~avSlHvY~pp 160 (200)
T 3eln_A 115 ------N----E----MIKKSERTLRENQCAYINDSIGLHRVENVSH-TEPAVSLHLYSPP 160 (200)
T ss_dssp ------C----C----CCEEEEEEECTTCEEEECTTTCEEEEECCCS-SCCEEEEEEEESC
T ss_pred ------c----c----ccccceEEeCCCCEEEecCCCcEEEEECCCC-CCCEEEEEeCCCC
Confidence 0 0 02345689999999999 8777999999752 4689999976543
No 75
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=91.15 E-value=0.36 Score=47.99 Aligned_cols=24 Identities=8% Similarity=0.091 Sum_probs=22.1
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||++|||+|..|.+.|.+
T Consensus 104 ~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 104 SYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEEEETTEEEEECTTCEEEEEECC
T ss_pred EEEeCCCCEEEECCCccEEEEeCC
Confidence 358999999999999999999986
No 76
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=90.98 E-value=1.6 Score=33.88 Aligned_cols=24 Identities=13% Similarity=0.289 Sum_probs=21.6
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
...|+|||+++||++-.|.+++..
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~~~ 100 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAGKG 100 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCC
Confidence 468999999999999999999863
No 77
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=90.88 E-value=1.4 Score=38.92 Aligned_cols=28 Identities=11% Similarity=0.315 Sum_probs=24.6
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+...++|.++-.||||+|.||...++++
T Consensus 107 ~~~~v~Ls~~~~L~IP~G~aHgf~~lsd 134 (197)
T 1nxm_A 107 NTYQTVIDASKSIFVPRGVANGFQVLSD 134 (197)
T ss_dssp CEEEEEECTTEEEEECTTEEEEEEECSS
T ss_pred eEEEEEeCCCcEEEeCCCeEEEEEeccC
Confidence 4577888899999999999999999964
No 78
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=90.70 E-value=0.29 Score=39.18 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=27.7
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
...|+|||+++||++-.|...|.++ +....+.+.+..
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~~~~--~~~~~~~i~~~~ 103 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISAASD--SPIGFLCIQVKA 103 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEEBTT--BCEEEEEEEEET
T ss_pred EEEeCCCCEEEECCCCcEEEEcCCC--CCEEEEEEEcCC
Confidence 4689999999999999999999753 334444454444
No 79
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=90.70 E-value=0.19 Score=39.48 Aligned_cols=24 Identities=8% Similarity=0.195 Sum_probs=21.8
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|+|||+++||++..|..+|.+
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 468999999999999999999864
No 80
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=90.60 E-value=0.25 Score=48.54 Aligned_cols=66 Identities=11% Similarity=0.195 Sum_probs=49.6
Q ss_pred CCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCc
Q 016948 178 QLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSP 256 (380)
Q Consensus 178 ~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~ 256 (380)
+|+...+|+.+.. -|+.+++|+=++.++.+.... . +
T Consensus 248 pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~-----~------------~-------------------------- 284 (397)
T 2phl_A 248 EGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNK-----E------------T-------------------------- 284 (397)
T ss_dssp TTEEEEEEEESSCEEEEEEEESEEEEEEEEECC-------C------------C--------------------------
T ss_pred CCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccc-----c------------C--------------------------
Confidence 4677888988744 688899999998887663210 0 0
Q ss_pred cccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 257 ETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 257 ~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
++.+.+..+|++||+++||.|+.|...|.+
T Consensus 285 --------------~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~ 314 (397)
T 2phl_A 285 --------------LEYESYRAELSKDDVFVIPAAYPVAIKATS 314 (397)
T ss_dssp --------------SCEEEEEEEEETTCEEEECTTCCEEEEESS
T ss_pred --------------CCceEEEEEecCCCEEEECCCCeEEEEeCC
Confidence 113467889999999999999999999973
No 81
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=90.49 E-value=0.91 Score=39.18 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=50.8
Q ss_pred ceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccc
Q 016948 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 170 ~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..-+++|.+++.+.+|.++.+-++.|+.|.=.+.+- +
T Consensus 36 ~~V~~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~------------------------d------------------- 72 (174)
T 1yfu_A 36 FIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLW------------------------V------------------- 72 (174)
T ss_dssp EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEE------------------------E-------------------
T ss_pred EEEEEEcCCCcCccCcCCCCceEEEEEeeEEEEEEE------------------------c-------------------
Confidence 445678999999999999999999999997544331 0
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
..+...++|++||++.+|+|--|.-...
T Consensus 73 ----------------------~g~~~~v~l~eGE~f~lP~gvpH~P~r~ 100 (174)
T 1yfu_A 73 ----------------------DGRRERADLKEGDIFLLPPHVRHSPQRP 100 (174)
T ss_dssp ----------------------TTEEEEEEECTTCEEEECTTCCEEEEBC
T ss_pred ----------------------CCceeeEEECCCCEEEeCCCCCcCcccc
Confidence 0113568999999999999999988654
No 82
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=90.02 E-value=0.31 Score=48.14 Aligned_cols=76 Identities=11% Similarity=0.173 Sum_probs=51.3
Q ss_pred EEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccC
Q 016948 173 LWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVN 251 (380)
Q Consensus 173 lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd 251 (380)
+-+. +|+...+|+.+.. -|+.+++|+=++.++.|..... ++ .
T Consensus 254 ~~l~-~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~-------------------~~---------------~-- 296 (416)
T 1uij_A 254 VDIN-EGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQ-------------------KQ---------------K-- 296 (416)
T ss_dssp EEEC-TTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-------------------------------------------
T ss_pred EEEc-CCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccc-------------------cc---------------c--
Confidence 3443 4677888998854 6899999999999987753100 00 0
Q ss_pred CCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 252 PYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 252 ~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
.. + . .+..+.+..+|++||+++||+|+.|...|.
T Consensus 297 -------~~-~--~----~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~ 330 (416)
T 1uij_A 297 -------QE-E--E----PLEVQRYRAELSEDDVFVIPAAYPFVVNAT 330 (416)
T ss_dssp -------------------CCEEEEEEEEETTCEEEECTTCCEEEEES
T ss_pred -------cc-c--c----ccceEEEEEEecCCcEEEECCCCeEEEEcC
Confidence 00 0 0 000235667999999999999999999997
No 83
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=90.02 E-value=0.99 Score=40.77 Aligned_cols=25 Identities=28% Similarity=0.279 Sum_probs=22.5
Q ss_pred EEEEcCCCeEe-eCCCceeeeeecCC
Q 016948 277 ECTVNAGEILY-LPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~Lf-iP~gWwH~V~~l~d 301 (380)
..+|.|||.+| ||++-+|.+.|..+
T Consensus 73 ~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 73 TRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp EEEEETTTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 46899999997 99999999999864
No 84
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=90.00 E-value=0.34 Score=39.52 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=23.2
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-..+|+|||+++||++-.|.+.|.++
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHGFVTGPG 104 (145)
T ss_dssp EEEEECTTCEEEECTTCCBEEECCTT
T ss_pred EEEEECCCCEEEECCCCeEEeEcCCC
Confidence 35789999999999999999999864
No 85
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=89.83 E-value=0.37 Score=41.82 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=23.5
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec-CC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS-PD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l-~d 301 (380)
-..+|+|||++|+|++-.|.+.|. ++
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~n~~~~ 188 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFTAAKGT 188 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESTTS
T ss_pred ccEEECCCCEEEeCCCCceEEEecCCC
Confidence 567999999999999999999997 54
No 86
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=89.45 E-value=0.31 Score=41.25 Aligned_cols=24 Identities=13% Similarity=0.289 Sum_probs=21.9
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
-..+|+|||++|||+|..|...|.
T Consensus 102 ~~~~l~~GD~i~iP~G~~h~~~n~ 125 (151)
T 4axo_A 102 RKVSASSGELIFIPKGSKIQFSVP 125 (151)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEE
T ss_pred EEEEEcCCCEEEECCCCEEEEEeC
Confidence 457999999999999999999985
No 87
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=89.42 E-value=1.7 Score=42.15 Aligned_cols=25 Identities=12% Similarity=0.231 Sum_probs=22.4
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.++..++||+++||++.||+..|.+
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~~~n~~ 341 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWSLQAET 341 (368)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS
T ss_pred EEEEecCCCEEEECCCCcEEEEeCC
Confidence 4578999999999999999999964
No 88
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=89.07 E-value=3 Score=36.68 Aligned_cols=41 Identities=17% Similarity=0.363 Sum_probs=29.1
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||+|+||...++++ ...+.|+....|+
T Consensus 116 ~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd----~a~~ly~~s~~Y~ 158 (196)
T 1wlt_A 116 KYVKAELNEENHYMLWIPPGFAHGFQALED----SIVIYFITHNEYS 158 (196)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEESSS----EEEEEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCC----CeEEEEEeCCcCC
Confidence 345667764 7899999999999999964 3334555555454
No 89
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=89.07 E-value=0.27 Score=38.31 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=22.8
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+..|+|||++|+|+|-.|.++|.++
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 4589999999999999999999875
No 90
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=89.06 E-value=0.48 Score=38.09 Aligned_cols=25 Identities=28% Similarity=0.387 Sum_probs=22.4
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+|+|||+++||++-.|...|..+
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEeEeCCC
Confidence 4689999999999999999999753
No 91
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=88.98 E-value=0.59 Score=38.28 Aligned_cols=39 Identities=13% Similarity=0.298 Sum_probs=33.3
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
.-++.+.+|+..+||++-||.|+.++| ++-+-|+||-..
T Consensus 64 ~~~~l~~~~~~~~i~Pq~wH~Ve~lsd--d~~f~leFyc~~ 102 (127)
T 3bb6_A 64 DQVILIEAGQFAVFPPEKWHNIEAMTD--DTYFNIDFFVAP 102 (127)
T ss_dssp SEEEEEEBTBEEECCSSCEEEEEESST--TCEEEEEEEECH
T ss_pred eEEEEeCCCCceEECCCCcEEEEEcCC--CEEEEEEEEeCC
Confidence 355789999999999999999999864 788889998654
No 92
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=88.93 E-value=1.5 Score=41.17 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=22.0
Q ss_pred EEEcCCCeEeeCCCceeeeeecCC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.+|++||++|||++-+|...|.++
T Consensus 87 ~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 87 YLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEECTTCEEEECTTCCEEEEECST
T ss_pred EEECCCCEEEECCCCcEEEEECCC
Confidence 589999999999999999999853
No 93
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=88.48 E-value=0.54 Score=46.85 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=49.0
Q ss_pred CCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCc
Q 016948 178 QLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSP 256 (380)
Q Consensus 178 ~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~ 256 (380)
+|+..++|+.+.. -|..+++|+=++.++.+.....- . +.|
T Consensus 290 pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~--~-------------~~g------------------------ 330 (445)
T 2cav_A 290 EGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQ--G-------------LES------------------------ 330 (445)
T ss_dssp TTEEEEEEEESSCEEEEEEEESCEEEEEEEC-------------------------------------------------
T ss_pred CCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccc--c-------------ccC------------------------
Confidence 4567788998854 68999999999999877521000 0 000
Q ss_pred cccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 257 ETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 257 ~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+..+.+..+|++||+++||.|+.|...|.
T Consensus 331 --------------~~~~~~~~~l~~GdV~vvP~g~~h~~~n~ 359 (445)
T 2cav_A 331 --------------MQLRRYAATLSEGDIIVIPSSFPVALKAA 359 (445)
T ss_dssp ---------------CCEEEEEEECTTCEEEECTTCCEEEEES
T ss_pred --------------cceEEEEeEecCCcEEEEcCCcEEEEEcC
Confidence 11235788999999999999999999997
No 94
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=88.46 E-value=0.33 Score=36.85 Aligned_cols=23 Identities=26% Similarity=0.325 Sum_probs=21.3
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
...|+|||+++||++-.|.+.+.
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~ 91 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAK 91 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcC
Confidence 56899999999999999999986
No 95
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=88.45 E-value=0.44 Score=47.34 Aligned_cols=75 Identities=9% Similarity=0.157 Sum_probs=51.3
Q ss_pred EEecCCCCcccccccCCC-ceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccC
Q 016948 173 LWIGNQLSETSFHKDHYE-NLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVN 251 (380)
Q Consensus 173 lwiG~~gs~t~lH~D~~~-n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd 251 (380)
+-+. +|+...+|+.+.. -|+.+++|+=++.++.+.....- . +.+
T Consensus 271 v~l~-pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~--~-------------~~~------------------- 315 (434)
T 2ea7_A 271 VDMK-EGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQ--K-------------QQE------------------- 315 (434)
T ss_dssp EEEC-TTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCC--T-------------TSC-------------------
T ss_pred EEEc-CCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccc--c-------------ccc-------------------
Confidence 4444 4567788998854 68999999999999876421000 0 000
Q ss_pred CCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 252 PYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 252 ~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
. .+.++.+..+|++||+++||.|+.|...|.
T Consensus 316 ----------~-------~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~ 346 (434)
T 2ea7_A 316 ----------E-------SLEVQRYRAELSEDDVFVIPAAYPVAINAT 346 (434)
T ss_dssp ----------C-------CEEEEEEEEEECTTCEEEECTTCCEEEEES
T ss_pred ----------c-------CcceEEEEEEecCCcEEEECCCCeEEEEcC
Confidence 0 000235667999999999999999999997
No 96
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=88.31 E-value=4 Score=35.52 Aligned_cols=41 Identities=10% Similarity=0.083 Sum_probs=28.1
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||+|+||...++++ ..-+.|+-...|+
T Consensus 99 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd----~a~~~y~~s~~Y~ 141 (184)
T 2ixk_A 99 QWVGERLSAENKRQMWIPAGFAHGFVVLSE----YAEFLYKTTDFWA 141 (184)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSS----EEEEEEEESSCCC
T ss_pred eEEEEEeCCCcCCEEEeCCCeEEEEEEcCC----CEEEEEeCCCccC
Confidence 345566665 5899999999999999964 2334454444444
No 97
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=88.15 E-value=4.5 Score=35.23 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=27.9
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||+|+||...++++ ..-+.|+-...|+
T Consensus 98 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd----~a~~~y~~s~~Y~ 140 (185)
T 1ep0_A 98 EWTGVRLSDENRREFFIPEGFAHGFLALSD----ECIVNYKCTELYH 140 (185)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSS----EEEEEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCC----CeEEEEecCCccC
Confidence 345566655 6899999999999999964 2334454444444
No 98
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=87.92 E-value=1.3 Score=44.52 Aligned_cols=88 Identities=7% Similarity=0.004 Sum_probs=53.9
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~v 250 (380)
..+-|.+ |+....|+-+..-++.++.|+=.+.+.-|.... .|.... .+. ..+.
T Consensus 51 ~r~~l~P-ggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~e-t~~~~~----~~~----~~~~----------------- 103 (476)
T 1fxz_A 51 SRCTLNR-NALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPS-TFEEPQ----QPQ----QRGQ----------------- 103 (476)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTCCC-C-------------------------------------
T ss_pred EEEEEcC-CCEecceecCCceEEEEEecEEEEEEEcCCCcc-hhhccc----ccc----cccc-----------------
Confidence 4455655 566777887777899999999999999886432 221100 000 0000
Q ss_pred CCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 251 d~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..+ +.+ ..-....|++||+++||+|-.|...|.++
T Consensus 104 ------------~~~---~~d-~~qk~~~l~~GDvi~iPaG~~h~~~N~G~ 138 (476)
T 1fxz_A 104 ------------SSR---PQD-RHQKIYNFREGDLIAVPTGVAWWMYNNED 138 (476)
T ss_dssp ----------------------CCCCEEEECTTEEEEECTTCEEEEEECSS
T ss_pred ------------ccc---ccc-ccceEEEEeCCCEEEECCCCcEEEEeCCC
Confidence 000 001 12235689999999999999999999864
No 99
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=87.89 E-value=1.6 Score=38.96 Aligned_cols=23 Identities=13% Similarity=0.189 Sum_probs=21.5
Q ss_pred EEEcCCCeEeeCCCceeeeeecC
Q 016948 278 CTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.+|+|||.+|||++-.|.+++.+
T Consensus 77 ~~l~~Gd~~~~p~~~~H~~~a~~ 99 (227)
T 3rns_A 77 KTISNGDFLEITANHNYSIEARD 99 (227)
T ss_dssp EEEETTEEEEECSSCCEEEEESS
T ss_pred EEECCCCEEEECCCCCEEEEECC
Confidence 58999999999999999999985
No 100
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=87.83 E-value=5.4 Score=35.32 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=29.1
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +-.||||+|+||...++++ + ++ +.|+....|+
T Consensus 121 ~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd--~-a~-~~Y~~s~~Y~ 163 (205)
T 3ryk_A 121 QWRGYILSADNHRQLLVPKGFAHGFCTLVP--H-TI-VMYKVDEYYS 163 (205)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSS--S-EE-EEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCceEEEEEcCC--C-EE-EEEEcCCCcC
Confidence 456677765 7999999999999999974 2 33 3355555454
No 101
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=87.34 E-value=0.37 Score=39.21 Aligned_cols=25 Identities=16% Similarity=0.211 Sum_probs=22.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
-.++|+|||+++||+|.-|..++.+
T Consensus 87 ~~~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 87 TVHAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp CEEEEETTCEEEECTTCCCEEEEEE
T ss_pred eEEEECCCCEEEECCCCeEEEEECC
Confidence 3478999999999999999999974
No 102
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=87.25 E-value=0.89 Score=45.25 Aligned_cols=24 Identities=4% Similarity=0.043 Sum_probs=22.1
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||++|+|+|--|.+.|.+
T Consensus 129 ~~~l~~GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 129 TYKLDQGDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp EEEEETTEEEEECTTCCEEEEECC
T ss_pred EEEecCCCEEEECCCCcEEEEECC
Confidence 458999999999999999999986
No 103
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=87.14 E-value=0.92 Score=36.73 Aligned_cols=39 Identities=21% Similarity=0.578 Sum_probs=33.1
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
.-++++.+|+.-+||+.-||.|. +. +++-..|+||....
T Consensus 63 ~~~~~~~~~~~~~i~Pq~wHrVe-~s--dD~~f~leFyc~~~ 101 (119)
T 3dl3_A 63 EIKVVINAGQFATSPPQYWHRIE-LS--DDAQFNINFWSDQD 101 (119)
T ss_dssp SEEEEEETTEEEEECTTCEEEEE-EC--TTCEEEEEEEECC-
T ss_pred cEEEEeCCCCCceeCCCceEEEE-EC--CCeEEEEEEEECch
Confidence 35679999999999999999999 65 47999999998765
No 104
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=86.91 E-value=1.4 Score=44.06 Aligned_cols=87 Identities=13% Similarity=0.036 Sum_probs=53.6
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~v 250 (380)
..+-|.+ |+....||....-++.++.|+=.+.+.-|... ..|.... ... ..+.
T Consensus 66 ~r~~i~p-ggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~-~tf~~~~---~~~-----~~~~----------------- 118 (459)
T 2e9q_A 66 IRHTIRP-KGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCA-ETYQTDL---RRS-----QSAG----------------- 118 (459)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECEEEEEECCTTCC-CCEEECC---C----------------------------
T ss_pred EEEEEcC-CCEecceecCCceEEEEEeeEEEEEEEeCCCc-chhccch---hhc-----cccc-----------------
Confidence 3455544 56677888776789999999999999877642 2221100 000 0000
Q ss_pred CCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 251 d~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.. +.+ ..-..-.|++||+++||+|--|...|.++
T Consensus 119 -------------~~---~~d-~~q~~~~l~~GDv~~iPaG~~H~~~N~g~ 152 (459)
T 2e9q_A 119 -------------SA---FKD-QHQKIRPFREGDLLVVPAGVSHWMYNRGQ 152 (459)
T ss_dssp --------------C---CCE-EECCCEEEETTEEEEECTTCCEEEEECSS
T ss_pred -------------cc---ccc-ccceeEEecCCCEEEECCCCCEEEEeCCC
Confidence 00 000 11123489999999999999999999864
No 105
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=86.80 E-value=0.41 Score=36.89 Aligned_cols=24 Identities=25% Similarity=0.221 Sum_probs=22.0
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
...|++||+++||++-.|.+.+.+
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~~~ 98 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRAVT 98 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEESS
T ss_pred EEEECCCCEEEeCCCCcEEEEEcC
Confidence 468999999999999999999975
No 106
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=86.76 E-value=6 Score=35.01 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=28.4
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||+|+||...++++ + + -+.|+....|+
T Consensus 98 ~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd--~-a-~~~y~~s~~Y~ 140 (205)
T 1oi6_A 98 QWDSVLMDQQDPRAVYLPVGVGHAFVALED--D-T-VMSYMLSRSYV 140 (205)
T ss_dssp CEEEEEECSSSCCEEEECTTCEEEEEECST--T-E-EEEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCeeEEEEEccC--C-e-EEEEecCCccC
Confidence 345667766 5899999999999999974 2 3 34454444443
No 107
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=86.66 E-value=0.45 Score=36.83 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=21.4
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
..+|+|||+++||+|-.|...+.
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeC
Confidence 57899999999999999999985
No 108
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=86.54 E-value=1.2 Score=38.46 Aligned_cols=24 Identities=29% Similarity=0.309 Sum_probs=21.6
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+.+|++||++ +|++-.|..+|..+
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~ 142 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTD 142 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSS
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCC
Confidence 4589999999 99999999999864
No 109
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=86.40 E-value=5.7 Score=34.48 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=27.8
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||+|+||...++++ -+ -+.|+-...|+
T Consensus 98 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd---~a-~~~y~~s~~Y~ 140 (183)
T 1dzr_A 98 QWVGVNLSAENKRQLWIPEGFAHGFVTLSE---YA-EFLYKATNYYS 140 (183)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSS---EE-EEEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCeEEEEEEcCC---Ce-EEEEEcCCccC
Confidence 345566665 5899999999999999964 23 34454444443
No 110
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=86.27 E-value=3 Score=38.97 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=23.0
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
-...|++||++|||++-.|...|..
T Consensus 257 ~~~~l~~GD~~~ip~~~~H~~~n~~ 281 (337)
T 1y3t_A 257 QEIQLNPGDFLHVPANTVHSYRLDS 281 (337)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECS
T ss_pred EEEEECCCCEEEECCCCeEEEEECC
Confidence 5679999999999999999999975
No 111
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=86.20 E-value=1.2 Score=40.26 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=28.7
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
-..+|+|||+++||++-.|.+.|..+ +....+.+....
T Consensus 184 ~~~~l~~Gd~i~ip~~~~H~~~n~~~--~~~~~l~v~~p~ 221 (243)
T 3h7j_A 184 CTVEMKFGTAYFCEPREDHGAINRSE--KESKSINIFFPP 221 (243)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECSS--SCEEEEEEEESC
T ss_pred EEEEECCCCEEEECCCCcEEeEeCCC--CCEEEEEEEcCC
Confidence 46789999999999999999999864 344444444433
No 112
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=86.06 E-value=0.65 Score=40.09 Aligned_cols=27 Identities=15% Similarity=-0.023 Sum_probs=23.8
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.-..+|+|||++|||++-.|..+|.++
T Consensus 143 ~~~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 143 EQWHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp TEEEEECTTCEEEEECSSSEEEEESSS
T ss_pred CEEEEeCCCCEEEEcCCCCeEeECCCC
Confidence 355799999999999999999999864
No 113
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=85.72 E-value=1.5 Score=44.11 Aligned_cols=39 Identities=13% Similarity=0.010 Sum_probs=29.5
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDV 210 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~ 210 (380)
..+-|.+ |+....||-+..-++.++.|+=++.+.-|...
T Consensus 48 ~r~~i~p-ggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~ 86 (493)
T 2d5f_A 48 SKRTLNR-NGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCP 86 (493)
T ss_dssp EEEEECT-TEEEEEEECSSCEEEEEEECEEEEEECCTTCC
T ss_pred EEEEeCC-CcEeCceecCCCeEEEEEeCEEEEEEEeCCCc
Confidence 3455554 56677788777788999999999999887653
No 114
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=85.52 E-value=6.1 Score=35.28 Aligned_cols=41 Identities=17% Similarity=0.092 Sum_probs=28.3
Q ss_pred CCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 274 KPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 274 ~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
+...++|.+ +..||||.|+||...++++ -+ -+.|+....|+
T Consensus 106 ~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd---~a-~~ly~~s~~Y~ 148 (216)
T 2c0z_A 106 CWEGTRLDDVSRRAVYLSEGIGHGFCAISD---EA-TLCYLSSGTYD 148 (216)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSS---EE-EEEEEESSCCC
T ss_pred eEEEEEecCCCCCEEEeCCCeeEEEEEcCC---Ce-EEEEecCCccC
Confidence 345666766 4799999999999999964 23 44455544443
No 115
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=85.23 E-value=2.1 Score=42.69 Aligned_cols=102 Identities=10% Similarity=0.003 Sum_probs=55.4
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccc-cCCCcceeeeecCCcccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSR-VNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~-~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..+-|.+ ++....||....-++.++.|+=.+.++-|.. +..|............+ ....|.-.
T Consensus 53 ~R~~i~P-~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~~~~~~~~~~~~-------------- 116 (465)
T 3qac_A 53 IRRTIEP-HGLLLPSFTSAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGEDERIREQGSRK-------------- 116 (465)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECEEEEEEECTTC-CCCC------------------------------------
T ss_pred EEEEEcC-CcCcccEEcCCCEEEEEEECcEEEEEecCCC-Cceeecchhccccccccccccccccc--------------
Confidence 3445654 5667778876678999999999999998864 34442110000000000 00000000
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..-.-.+ +.+ ..--...|++||+++||+|--|...|.++
T Consensus 117 ---------~~~~~~~---~~d-~hqk~~~~~~GDvi~iPaG~~hw~~N~G~ 155 (465)
T 3qac_A 117 ---------FGMRGDR---FQD-QHQKIRHLREGDIFAMPAGVSHWAYNNGD 155 (465)
T ss_dssp --------------------CC-CCCCEEEEETTEEEEECTTCEEEEECCSS
T ss_pred ---------ccccccc---ccc-cccceeeecCCCEEEECCCCeEEEEcCCC
Confidence 0000001 111 22335789999999999999999999875
No 116
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=85.20 E-value=0.63 Score=38.25 Aligned_cols=24 Identities=13% Similarity=0.234 Sum_probs=21.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
-..+|+|||++|||+|..|..++.
T Consensus 93 ~~~~l~~GD~i~~p~g~~h~~~~~ 116 (133)
T 2pyt_A 93 ETMIAKAGDVMFIPKGSSIEFGTP 116 (133)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEE
T ss_pred EEEEECCCcEEEECCCCEEEEEeC
Confidence 346899999999999999999874
No 117
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=85.15 E-value=7.4 Score=34.93 Aligned_cols=89 Identities=13% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCceEEEecCCCCcccccccCC----CceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcc
Q 016948 168 PEAVNLWIGNQLSETSFHKDHY----ENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVR 243 (380)
Q Consensus 168 ~~~~~lwiG~~gs~t~lH~D~~----~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~ 243 (380)
....|.-.+.+|+.-.+|+... .=++..++|+=.-+++.-.. +
T Consensus 65 f~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~--------------------~------------- 111 (225)
T 1upi_A 65 VRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIRE--------------------G------------- 111 (225)
T ss_dssp CCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCB--------------------T-------------
T ss_pred eEEEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCC--------------------C-------------
Confidence 3566777788888889998853 35788889984333321110 0
Q ss_pred cccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcC--CCeEeeCCCceeeeeecCCCCCeEEEEEeeecCCCC
Q 016948 244 YVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNA--GEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318 (380)
Q Consensus 244 ~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~p--GD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~ 318 (380)
-|.| .+...++|.+ +..||||+|+||...++++ + + -+.|+....|+
T Consensus 112 ----------------------SpTf---G~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd--~-a-~vly~~s~~Y~ 159 (225)
T 1upi_A 112 ----------------------SPTF---GRWDSVLLDDQDRRTIYVSEGLAHGFLALQD--N-S-TVMYLCSAEYN 159 (225)
T ss_dssp ----------------------CTTT---TCEEEEEEETTTCCEEEECTTCEEEEEECSS--S-E-EEEEEESSCCC
T ss_pred ----------------------CCCC---CcEEEEEecCCCCcEEEeCCCeeEEEEEcCC--C-E-EEEEecCCccC
Confidence 0222 2345666766 5799999999999999974 2 3 34454444443
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=84.31 E-value=2.6 Score=39.07 Aligned_cols=67 Identities=19% Similarity=0.351 Sum_probs=52.4
Q ss_pred ceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccc
Q 016948 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCS 249 (380)
Q Consensus 170 ~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~ 249 (380)
..-+.+|.++.++.+|+|..+=|+.|+.|.=+..+..
T Consensus 32 ~~V~~vgGpN~R~d~H~~~~dE~FyqlkG~m~l~~~d------------------------------------------- 68 (286)
T 2qnk_A 32 LKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLE------------------------------------------- 68 (286)
T ss_dssp EEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEE-------------------------------------------
T ss_pred EEEEEEeCCCcCccCcCCCCCeEEEEEeCeEEEEEEe-------------------------------------------
Confidence 3446789999999999999999999999976544310
Q ss_pred cCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 250 VNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 250 vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
+ .+...++|++||+..+|+|--|.-....+
T Consensus 69 ---------------------~-g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 69 ---------------------Q-GKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp ---------------------T-TEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred ---------------------C-CceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 0 12356899999999999999999987653
No 119
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=83.78 E-value=1.6 Score=38.38 Aligned_cols=38 Identities=16% Similarity=0.387 Sum_probs=29.4
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeec
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
.+++.+++||+|+||+|-+|...+.+ .....++.++-.
T Consensus 126 ~~~i~v~~GDlIiIPaG~~H~f~~~~--~~~~~airlF~~ 163 (191)
T 1vr3_A 126 WIRISMEKGDMITLPAGIYHRFTLDE--KNYVKAMRLFVG 163 (191)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECT--TCCEEEEEEESS
T ss_pred EEEEEECCCCEEEECcCCcCCcccCC--CCCEEEEEEECC
Confidence 46789999999999999999988754 245666765543
No 120
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=83.76 E-value=1.6 Score=37.45 Aligned_cols=26 Identities=8% Similarity=0.068 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-..+|.+||.+|||++-.|..+|..+
T Consensus 128 ~~~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 128 NKFLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp EEEEEETTCEEEECTTCEEEEEECSS
T ss_pred EEEEEcCCCEEEECCCCCEEEEECCC
Confidence 34589999999999999999999865
No 121
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=83.65 E-value=2.6 Score=40.38 Aligned_cols=24 Identities=8% Similarity=0.253 Sum_probs=22.1
Q ss_pred EEEEcCCCeEeeCCCceeeeeecC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
..+|++||++|||+|-.|.+.+.+
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~ 315 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEA 315 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESS
T ss_pred EEEeCCCCEEEECCCCCEEEEecC
Confidence 469999999999999999999974
No 122
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=82.19 E-value=1.2 Score=38.73 Aligned_cols=37 Identities=11% Similarity=0.237 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
..+.+.+++||+++||+|-+|...+.++ ....++.++
T Consensus 120 ~~~~~~l~~GDli~IP~g~~H~~~~~~~--~~~~~ir~F 156 (179)
T 1zrr_A 120 EVFQVLCEKNDLISVPAHTPHWFDMGSE--PNFTAIRIF 156 (179)
T ss_dssp CEEEEECCCSCEEEECTTCCBCCCCSSC--SSCEEEEEE
T ss_pred EEEEEEECCCCEEEECCCCeEeeecCCC--ceEEEEEec
Confidence 3467889999999999999999887542 345555554
No 123
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=82.03 E-value=7.1 Score=34.62 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=21.9
Q ss_pred EEEEcCCCeEeeCCCceeeeee-cC
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQ-SP 300 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~-l~ 300 (380)
...|++||+++||++-.|.+.+ .+
T Consensus 192 ~~~l~~Gd~i~ip~~~~H~~~~~~~ 216 (227)
T 3rns_A 192 PFIVKKGESAVLPANIPHAVEAETE 216 (227)
T ss_dssp EEEEETTEEEEECTTSCEEEECCSS
T ss_pred EEEECCCCEEEECCCCcEEEEeCCC
Confidence 5689999999999999999999 64
No 124
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=82.01 E-value=1.2 Score=40.43 Aligned_cols=27 Identities=15% Similarity=0.439 Sum_probs=24.4
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.....|+|||++|||+|-.|..+|.++
T Consensus 101 ~~~~~l~~GD~i~iP~g~~H~~~N~~~ 127 (239)
T 2xlg_A 101 LYSIQSEPKQLIYSPNHYMHGFVNPTD 127 (239)
T ss_dssp EEEEECCTTEEEEECTTEEEEEECCSS
T ss_pred eeEEEECCCCEEEECCCCCEEEEeCCC
Confidence 457899999999999999999999864
No 125
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=81.81 E-value=6.6 Score=34.84 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=30.4
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC-CCCeEEEEEeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD-DNGYTIALNYWYDMQ 316 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d-~~~~sIsvn~w~~~~ 316 (380)
..+.-++|++|+.|+.-+|.|..... ..-+|||+|+.....
T Consensus 169 ~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~~~ 210 (216)
T 2rg4_A 169 RSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG 210 (216)
T ss_dssp EEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC---
T ss_pred eEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecCCc
Confidence 47778999999999999999997432 245788888776543
No 126
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=81.08 E-value=3.3 Score=41.88 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=29.5
Q ss_pred ceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCC
Q 016948 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209 (380)
Q Consensus 170 ~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~ 209 (380)
...+-|.+ |+....||-+..-++.++.|+=.+.+.-|..
T Consensus 50 ~~r~~i~p-~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~ 88 (510)
T 3c3v_A 50 LSRLVLRR-NALRRPFYSNAPQEIFIQQGRGYFGLIFPGC 88 (510)
T ss_dssp EEEEEECT-TEEEEEEECSSCEEEEEEECCEEEEEECTTC
T ss_pred EEEEEECC-CCCccceecCCCeEEEEEeCEEEEEEEeCCC
Confidence 34455655 4566778877778999999999999998864
No 127
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=80.31 E-value=9.9 Score=33.50 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=52.0
Q ss_pred CCceEEEecCCCCcccccccC----CCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcc
Q 016948 168 PEAVNLWIGNQLSETSFHKDH----YENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVR 243 (380)
Q Consensus 168 ~~~~~lwiG~~gs~t~lH~D~----~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~ 243 (380)
....|.-++.+|+.-.+|+.. ..=++..++|+=.-+++.-..
T Consensus 43 fvQ~n~S~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~---------------------------------- 88 (201)
T 4hn1_A 43 VAQVNVAVSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRI---------------------------------- 88 (201)
T ss_dssp CCEEEEEEECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCB----------------------------------
T ss_pred eeEEEEEEcCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCC----------------------------------
Confidence 356777788899999999974 235788889984333322110
Q ss_pred cccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcC--CCeEeeCCCceeeeeecCC
Q 016948 244 YVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNA--GEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 244 ~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~p--GD~LfiP~gWwH~V~~l~d 301 (380)
.-|.| -+...++|.+ +-.||||.|.+|-..++++
T Consensus 89 ---------------------~SpTf---G~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd 124 (201)
T 4hn1_A 89 ---------------------GSPTF---GRWEIVPMDAERNTAVYLTAGLGRAFLSLTD 124 (201)
T ss_dssp ---------------------TCTTT---TCEEEEEEETTTCCEEEECTTCEEEEEECST
T ss_pred ---------------------CCCCC---CeEEEEEecCCCCCEEEeCCcceEEEeecCC
Confidence 01223 2345666765 7899999999999999975
No 128
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=78.93 E-value=8.3 Score=31.95 Aligned_cols=28 Identities=18% Similarity=0.343 Sum_probs=22.2
Q ss_pred CCCCcccccccCC-CceEEEEeeeEEEEE
Q 016948 177 NQLSETSFHKDHY-ENLYTVVSGQKHFLL 204 (380)
Q Consensus 177 ~~gs~t~lH~D~~-~n~~~qv~G~K~~~L 204 (380)
++|+.-.+|.... .-+++.++|+=+++|
T Consensus 43 ~~g~~RG~H~Hk~~~q~li~l~Gs~~v~l 71 (141)
T 2pa7_A 43 KGEEPRGFHAHKKLEQVLVCLNGSCRVIL 71 (141)
T ss_dssp CSSCCEEEEEESSCCEEEEEEESCEEEEE
T ss_pred CCCCEECcCcCCCceEEEEEEccEEEEEE
Confidence 3778788887663 467888999999998
No 129
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=78.61 E-value=2.5 Score=39.14 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-+.+|++||++|+|++-.|..+|..+
T Consensus 108 ~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 108 QVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp CEEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEEECCCCEEEECCCCcEEEEECCC
Confidence 35699999999999999999999864
No 130
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=77.42 E-value=17 Score=33.02 Aligned_cols=25 Identities=8% Similarity=0.074 Sum_probs=22.8
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
-...|++||++|||++-.|...|..
T Consensus 221 ~~~~l~~GD~i~i~~~~~H~~~n~~ 245 (274)
T 1sef_A 221 EWYPVEKGDYIFMSAYVPQAAYAVG 245 (274)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEEC
T ss_pred EEEEECCCCEEEECCCCCEEEEeCC
Confidence 4579999999999999999999985
No 131
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=77.41 E-value=12 Score=33.84 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=56.0
Q ss_pred eEEEecCCCCcccccccC--CCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccc
Q 016948 171 VNLWIGNQLSETSFHKDH--YENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWC 248 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~--~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s 248 (380)
--+.|..+|..+|+|+.. .+-+.+--=|.=.+.||-......+-. +...+.+|.
T Consensus 108 eK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~----------------~~v~V~~DG-------- 163 (246)
T 3kmh_A 108 EKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTAD----------------SDITVVIDG-------- 163 (246)
T ss_dssp EEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCC----------------SCEEEEETT--------
T ss_pred eeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccC----------------CCeEEecCC--------
Confidence 346677788889999987 346666666677777776654322210 001111110
Q ss_pred ccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 249 SVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 249 ~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
....+ ...-+++|.||+-+-||+|-||.....+
T Consensus 164 -------------~~~~~------~aG~~i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 164 -------------CRQKH------TAGSQLRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp -------------EEEEE------CTTCEEEECTTCEEEECTTEEEEEEECT
T ss_pred -------------eEEEe------CCCCEEEECCCCeEecCCCCEEEEEecC
Confidence 11122 4467899999999999999999999875
No 132
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=77.29 E-value=2.6 Score=38.29 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=23.3
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-+.+|+|||++|+|++-.|..+|..+
T Consensus 99 ~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 99 KTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEEECCCCEEEECCCCCEEEEeCCC
Confidence 35699999999999999999999864
No 133
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=77.16 E-value=6.3 Score=39.63 Aligned_cols=87 Identities=9% Similarity=0.069 Sum_probs=51.8
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCccccccccc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSV 250 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~v 250 (380)
..+-|.+ |+....||-...-++.++.|+=.+-+.-|... ..|.... . . ..|+
T Consensus 49 ~R~~i~p-ggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~-e~f~~~~--~---~----~~~~----------------- 100 (496)
T 3ksc_A 49 SRATLQR-NALRRPYYSNAPQEIFIQQGNGYFGMVFPGCP-ETFEEPQ--E---S----EQGE----------------- 100 (496)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECCEEEEEECTTCC-CC-------------------------------------
T ss_pred EEEEecC-CCEeCceEcCCCEEEEEEeCceEEEEEeCCCC-ccchhhh--h---c----cccc-----------------
Confidence 3344544 56666677655678999999999999988642 2331100 0 0 0000
Q ss_pred CCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 251 NPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 251 d~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-.+ +.+.-..+. .|++||++.||+|--|...|.++
T Consensus 101 ------------~~~---~~d~~qk~~-~l~~GDV~viPaG~~h~~~N~G~ 135 (496)
T 3ksc_A 101 ------------GRR---YRDRHQKVN-RFREGDIIAVPTGIVFWMYNDQD 135 (496)
T ss_dssp -------------------CCCCCCEE-EECTTEEEEECTTCEEEEEECSS
T ss_pred ------------ccc---cccchheee-ccCCCCEEEECCCCcEEEEcCCC
Confidence 001 111012233 99999999999999999999864
No 134
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=76.81 E-value=2.7 Score=41.45 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=25.0
Q ss_pred EEEEcCCCeEeeCCCceeeeeecCCCCCeEE
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQSPDDNGYTI 307 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sI 307 (380)
..+|++||+++||+|.-|.+.|.++...+.|
T Consensus 87 ~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i 117 (418)
T 3s7i_A 87 SFNLDEGHALRIPSGFISYILNRHDNQNLRV 117 (418)
T ss_dssp EEEEETTEEEEECTTCEEEEEECCSSCCEEE
T ss_pred EEEecCCCEEEECCCCeEEEEecCCCccEEE
Confidence 4599999999999999999999864333433
No 135
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=76.34 E-value=1.5 Score=37.35 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=20.0
Q ss_pred EEEEcCCCeEeeCCCceeeeee
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
...|+|||+++||+|-.|++.+
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES
T ss_pred EEEeCCCCEEEECCCCeEeeEC
Confidence 4689999999999999999974
No 136
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=75.60 E-value=2.9 Score=39.96 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=23.5
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
...+|+|||++|||++-.|..+|.++
T Consensus 94 ~~~~L~~GD~v~ip~g~~H~~~n~~~ 119 (350)
T 1juh_A 94 QTRVLSSGDYGSVPRNVTHTFQIQDP 119 (350)
T ss_dssp EEEEEETTCEEEECTTEEEEEEECST
T ss_pred EEEEECCCCEEEECCCCcEEEEeCCC
Confidence 46789999999999999999999864
No 137
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=74.49 E-value=2.9 Score=38.40 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=23.4
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-+.+|+|||.+|+|++-.|..+|..+
T Consensus 102 ~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 102 ETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp CEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEEEECCCCEEEECCCCCEEEEeCCC
Confidence 35799999999999999999999864
No 138
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=74.28 E-value=4.4 Score=39.57 Aligned_cols=23 Identities=4% Similarity=-0.070 Sum_probs=21.5
Q ss_pred EEEcCCCe------EeeCCCceeeeeecC
Q 016948 278 CTVNAGEI------LYLPSMWFHHVRQSP 300 (380)
Q Consensus 278 ~~L~pGD~------LfiP~gWwH~V~~l~ 300 (380)
.+|++||+ ++||+|.-|...|.+
T Consensus 96 ~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 96 YFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp EEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred EEECCCCcccccceEEECCCCcEEEEeCC
Confidence 48999999 999999999999986
No 139
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=72.55 E-value=2.4 Score=38.56 Aligned_cols=26 Identities=8% Similarity=0.047 Sum_probs=22.9
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.-...|++||++|+|++-.|..+|.+
T Consensus 217 ~~~~~l~~GD~i~~~~~~~H~~~n~g 242 (261)
T 1rc6_A 217 NNWIPVKKGDYIFMGAYSLQAGYGVG 242 (261)
T ss_dssp SCEEEEETTCEEEECSSEEEEEEEC-
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCC
Confidence 35679999999999999999999975
No 140
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=70.68 E-value=5.2 Score=32.64 Aligned_cols=25 Identities=32% Similarity=0.527 Sum_probs=21.9
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
-...++|||+++||+|-.|...+.+
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEEEecCCeEEEEcCCCCEEEEeCC
Confidence 4568999999999999999988753
No 141
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=70.15 E-value=2 Score=34.54 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=17.6
Q ss_pred EEEEcCCCeEeeCCCceeeeee
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
.++++|||++++|+||-..-+.
T Consensus 81 ~~~l~aGD~~~~P~G~~gtWev 102 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSRLEI 102 (116)
T ss_dssp CEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCeEEEEE
Confidence 4699999999999999544443
No 142
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=69.51 E-value=3.5 Score=41.15 Aligned_cols=39 Identities=15% Similarity=-0.069 Sum_probs=29.5
Q ss_pred eEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCc
Q 016948 171 VNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDV 210 (380)
Q Consensus 171 ~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~ 210 (380)
..+-|.+ ++..+.||-+..-++.++.|+=.+-++.|...
T Consensus 46 ~r~~i~p-~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~ 84 (466)
T 3kgl_A 46 VRYIIES-KGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCA 84 (466)
T ss_dssp EEEEECT-TEEEEEEEESSCEEEEEEECEEEEEEECTTCC
T ss_pred EEEEECC-CCEeCCeeCCCCeEEEEEeCeEEEEEecCCCc
Confidence 3455555 45666677777788999999999999999754
No 143
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=68.45 E-value=5.3 Score=33.12 Aligned_cols=26 Identities=8% Similarity=0.073 Sum_probs=22.9
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
...+.|+|||+..||.|-||...+-.
T Consensus 75 d~~V~l~~Ge~yvVPkGveH~p~a~~ 100 (140)
T 3d0j_A 75 IELTLMEKGKVYNVPAECWFYSITQK 100 (140)
T ss_dssp EEEEECCTTCCEEECTTCEEEEEECT
T ss_pred cceEEecCCCEEEeCCCccCcccCCC
Confidence 35689999999999999999998854
No 144
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=68.32 E-value=5.2 Score=36.05 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=24.0
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
.-...|+|||+||++++=.|..+|..+
T Consensus 203 ~~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 203 ENYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred CEEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 455699999999999999999999864
No 145
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=67.01 E-value=3 Score=39.13 Aligned_cols=23 Identities=4% Similarity=-0.139 Sum_probs=20.8
Q ss_pred eEEEEcCCCeEeeCCCceeeeee
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
-.+.|+|||++|||+|-.|..-.
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEG 180 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEES
T ss_pred ceeECCCCCEEEcCCCCceEcCC
Confidence 47889999999999999999865
No 146
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=66.13 E-value=3.2 Score=39.29 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=20.7
Q ss_pred eEEEEcCCCeEeeCCCceeeeee
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
-.+.|+|||++|||+|-.|..-+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 46899999999999999999765
No 147
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=64.89 E-value=5.1 Score=30.85 Aligned_cols=26 Identities=19% Similarity=0.529 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+.++..|++||++.||.|+.=...+.
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~ 29 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAA 29 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES
T ss_pred chhhceecCCcEEEECCCCceeEEec
Confidence 45788999999999999998888875
No 148
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=64.57 E-value=4.5 Score=39.77 Aligned_cols=26 Identities=12% Similarity=0.414 Sum_probs=23.2
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeec
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+.+...|++||+++||.|+.|...+.
T Consensus 330 ~~~~~~l~~GDV~vvP~G~~~~~~~~ 355 (418)
T 3s7i_A 330 RRYTARLKEGDVFIMPAAHPVAINAS 355 (418)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES
T ss_pred eEEEeeeCCCCEEEECCCCEEEEECC
Confidence 45688999999999999999998874
No 149
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=63.76 E-value=4 Score=36.82 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=21.5
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+.+|+|||.+|+|++-.|..+|.
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeC
Confidence 56899999999999999999996
No 150
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=63.60 E-value=4.5 Score=40.06 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=21.6
Q ss_pred eEEEEcCCCeEeeCCCceeeeeec
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
-.+.|+|||.+|||+|-.|...+-
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCCC
Confidence 378999999999999999998863
No 151
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=63.23 E-value=4.7 Score=39.33 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=20.9
Q ss_pred eEEEEcCCCeEeeCCCceeeeee
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQ 298 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~ 298 (380)
-.+.|+|||++|||+|-.|..-.
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcCC
Confidence 47899999999999999999865
No 152
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=61.00 E-value=5.7 Score=40.17 Aligned_cols=40 Identities=13% Similarity=-0.034 Sum_probs=29.6
Q ss_pred ceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCc
Q 016948 170 AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDV 210 (380)
Q Consensus 170 ~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~ 210 (380)
...+-|.+. ...+.||.+..-++.++.|+=.+=+.-|...
T Consensus 50 ~~R~~i~p~-Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcp 89 (531)
T 3fz3_A 50 ASRITIQRN-GLHLPSYSNAPQLIYIVQGRGVLGAVFSGCP 89 (531)
T ss_dssp EEEEEECTT-EEEEEEEESSCEEEEEEECEEEEEECCTTCC
T ss_pred EEEEEecCC-CEeCCccCCCCeEEEEEECcEEEEEEcCCCc
Confidence 344556654 4566788877788999999998888888754
No 153
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=54.04 E-value=6.6 Score=36.17 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
..-...|+|||+||++++=.|...|.++
T Consensus 228 ~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 228 NQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp TTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred CCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 3567899999999999999999999864
No 154
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=51.43 E-value=11 Score=34.73 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.4
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
-...+++||++|||++-.|...|.++
T Consensus 225 ~~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 225 NWYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEEecCCCEEEECCCCcEEEEeCCC
Confidence 46789999999999999999999864
No 155
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=49.51 E-value=8.6 Score=34.80 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=16.4
Q ss_pred CeEEEEcCCCeEeeCCCce
Q 016948 275 PFECTVNAGEILYLPSMWF 293 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWw 293 (380)
.-.++++|||+++||+||-
T Consensus 204 G~~~~~~aGD~~~~P~G~~ 222 (238)
T 3myx_A 204 GSSLTVNTGDTVFVAQGAP 222 (238)
T ss_dssp SCEEEECTTCEEEECTTCE
T ss_pred CCEEEECCCCEEEECCCCE
Confidence 3468999999999999994
No 156
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=49.39 E-value=22 Score=31.02 Aligned_cols=40 Identities=13% Similarity=0.291 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCCeEeeCCC----ceeeeeecCCCCCeEEEEEee
Q 016948 273 PKPFECTVNAGEILYLPSM----WFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 273 ~~~~~~~L~pGD~LfiP~g----WwH~V~~l~d~~~~sIsvn~w 312 (380)
.....+.|.+||+|.++.. |.|.|-......+.-||+.|.
T Consensus 157 ~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 157 VAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp CCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEE
T ss_pred CceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEee
Confidence 4568999999999999875 778887764334667777774
No 157
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=49.03 E-value=9.6 Score=34.56 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=32.9
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
...+..++|++|+.|+...|.|.-+. .+.-.+++.|+..-
T Consensus 157 ~~~V~P~~G~~v~F~s~~lH~v~pV~--~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSSSLHQVTPVL--SGERTAAFMWLQSM 196 (243)
T ss_dssp EEEECCCTTCEEEEETTSEEEECCEE--EECEEEEEEEEEES
T ss_pred cEEEecCCCEEEEECCCCeEcCcccc--ccCEEEEEEehhhc
Confidence 35677889999999999999998763 36779999999843
No 158
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=49.00 E-value=15 Score=33.97 Aligned_cols=28 Identities=4% Similarity=-0.118 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCeEeeCCCceeeeeecCC
Q 016948 274 KPFECTVNAGEILYLPSMWFHHVRQSPD 301 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~gWwH~V~~l~d 301 (380)
...+..|++||+|.||++--|+.....+
T Consensus 242 ~~q~~~L~~~DsLLIpa~~~y~~~r~~g 269 (286)
T 2qnk_A 242 GGRRLSLAPDDSLLVLAGTSYAWERTQG 269 (286)
T ss_dssp TTEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred CCeEEeccCCCEEEecCCCeEEEEecCC
Confidence 4577889999999999999999998765
No 159
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=48.65 E-value=8.4 Score=35.47 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=21.2
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
+.+|++||.+|+|++--|+++|.
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~ 132 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCV 132 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEES
T ss_pred EEEEcCCCEEEECCCCCEEEEeC
Confidence 46899999999999999999994
No 160
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=46.50 E-value=25 Score=30.04 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=26.0
Q ss_pred EcCCCe--EeeCCCceeeeeecCCCCCeEEEEEeeecCCCChh
Q 016948 280 VNAGEI--LYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFDIK 320 (380)
Q Consensus 280 L~pGD~--LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~~~~~ 320 (380)
+..||. ++||+|+|+..++.++ + -.-|.+...+.|+-+
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g--~-~~LV~C~VaPGF~f~ 140 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQD--G-FSLVGCMVSPGFTFD 140 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSS--S-EEEEEEEESSCCCGG
T ss_pred cccCceeEEEECCCCEEEEEECCC--C-cEEEEEEECCCccCC
Confidence 345787 9999999999998732 2 344556666666543
No 161
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=41.51 E-value=19 Score=31.12 Aligned_cols=22 Identities=18% Similarity=0.081 Sum_probs=20.3
Q ss_pred EEcCCCeEeeCCCceeeeeecC
Q 016948 279 TVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 279 ~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
++.+||.+++|+|--|+..+..
T Consensus 162 ~~~~Gd~~~~p~g~~H~p~a~~ 183 (195)
T 2q1z_B 162 RFGAGDIEIADQELEHTPVAER 183 (195)
T ss_dssp EEETTCEEEECSSCCCCCEECS
T ss_pred EECCCeEEEeCcCCccCCEeCC
Confidence 7899999999999999999953
No 162
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=39.60 E-value=21 Score=29.94 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=19.8
Q ss_pred EEcCCCeEeeCCCceeeeeec
Q 016948 279 TVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 279 ~L~pGD~LfiP~gWwH~V~~l 299 (380)
++.+||.++.|+|-.|...+.
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp CBCTTCEEEECSSEEECEEES
T ss_pred EECCCeEEEECCCCcceeEeC
Confidence 688999999999999999997
No 163
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=37.34 E-value=50 Score=29.03 Aligned_cols=40 Identities=8% Similarity=0.199 Sum_probs=29.0
Q ss_pred CCeEEEEcCCCeEeeCC---CceeeeeecCCCC-----CeEEEEEeee
Q 016948 274 KPFECTVNAGEILYLPS---MWFHHVRQSPDDN-----GYTIALNYWY 313 (380)
Q Consensus 274 ~~~~~~L~pGD~LfiP~---gWwH~V~~l~d~~-----~~sIsvn~w~ 313 (380)
....+.|.+||+|.++. .|+|.|....... +.-||+.|..
T Consensus 154 ~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 154 PLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp CCEEEEECTTCEEEECGGGTTCCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ceEEEECCCCCEEEECchHHceEeccCcccCCcCCCCCCCEEEEEeee
Confidence 45789999999999984 4899998764211 2367777654
No 164
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=37.27 E-value=22 Score=31.83 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=20.9
Q ss_pred EEEEcCCCeEeeCCCceeeeeec
Q 016948 277 ECTVNAGEILYLPSMWFHHVRQS 299 (380)
Q Consensus 277 ~~~L~pGD~LfiP~gWwH~V~~l 299 (380)
...+.|||+++||+|=.|.....
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeeccc
Confidence 67899999999999999998765
No 165
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=36.08 E-value=20 Score=29.42 Aligned_cols=22 Identities=18% Similarity=-0.094 Sum_probs=19.3
Q ss_pred EEEcCCCeEeeCCCceee-eeec
Q 016948 278 CTVNAGEILYLPSMWFHH-VRQS 299 (380)
Q Consensus 278 ~~L~pGD~LfiP~gWwH~-V~~l 299 (380)
.++++||.+|+|+|--|. +.+.
T Consensus 86 ~~~~~Gd~~~~p~g~~H~p~~~~ 108 (145)
T 2o1q_A 86 DTAIAPGYGYESANARHDKTEFP 108 (145)
T ss_dssp EEEESSEEEEECTTCEESCCEEE
T ss_pred eEeCCCEEEEECcCCccCCeECC
Confidence 589999999999999999 6554
No 166
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=35.10 E-value=29 Score=29.33 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=20.3
Q ss_pred EEcCCCeEeeCCCceeeeeecC
Q 016948 279 TVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 279 ~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
++++||.+++|+|--|...+.+
T Consensus 83 ~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 83 KQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp CEETTEEEEECTTCEECEECCT
T ss_pred EECCCeEEEeCCCCceeeEeCC
Confidence 5789999999999999999975
No 167
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=32.96 E-value=30 Score=31.17 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=22.3
Q ss_pred CeEEEEcCCCeEeeCCCceeeeeecC
Q 016948 275 PFECTVNAGEILYLPSMWFHHVRQSP 300 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~gWwH~V~~l~ 300 (380)
.-.++++|||+++||.|.-|......
T Consensus 82 g~~~~~~~Gd~~~ip~G~~~~w~~~~ 107 (238)
T 3myx_A 82 TDSVTLSTGESAVIGRGTQVRIDAQP 107 (238)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEECT
T ss_pred CeEEEEcCCCEEEECCCCEEEEEecC
Confidence 45678999999999999988888763
No 168
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=26.58 E-value=55 Score=29.21 Aligned_cols=41 Identities=15% Similarity=0.323 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCCeEeeCC----CceeeeeecCCCCCeEEEEEeee
Q 016948 273 PKPFECTVNAGEILYLPS----MWFHHVRQSPDDNGYTIALNYWY 313 (380)
Q Consensus 273 ~~~~~~~L~pGD~LfiP~----gWwH~V~~l~d~~~~sIsvn~w~ 313 (380)
.....+.|.+||+|.+.. .|.|.|.......+.-|++.|-.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEEC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeee
Confidence 356899999999999997 47799976522235677777754
No 169
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=25.00 E-value=2.2e+02 Score=24.58 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=30.7
Q ss_pred eEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEee
Q 016948 276 FECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYW 312 (380)
Q Consensus 276 ~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w 312 (380)
.....++|+++++=-.+-|.|.|-++..-+.+-|.+|
T Consensus 146 ~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~ 182 (197)
T 3rcq_A 146 ETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVW 182 (197)
T ss_dssp EEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEE
T ss_pred EEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeee
Confidence 3456789999999999999999987756667777786
No 170
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=22.91 E-value=77 Score=28.52 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCeEeeCCCceeeeee-cCCCCCeEEEEEee
Q 016948 273 PKPFECTVNAGEILYLPSMWFHHVRQ-SPDDNGYTIALNYW 312 (380)
Q Consensus 273 ~~~~~~~L~pGD~LfiP~gWwH~V~~-l~d~~~~sIsvn~w 312 (380)
.....+.++|||+|+.=..-||.... .++..-.++++.|.
T Consensus 225 ~~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~ 265 (291)
T 2opw_A 225 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLM 265 (291)
T ss_dssp GGCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEE
T ss_pred CCeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEE
Confidence 45788999999999999999999873 33223345555553
No 171
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=22.90 E-value=59 Score=28.37 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=33.8
Q ss_pred CeEEEEcCCCeEeeCC---------CceeeeeecCCCCCeEEEEEeeecCC
Q 016948 275 PFECTVNAGEILYLPS---------MWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 275 ~~~~~L~pGD~LfiP~---------gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
.+.+..++|++|+.|. ..+|.+.-+. .+.-.++|.|++..
T Consensus 170 ~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~--~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTL--KGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEE--ESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEeeCCCCCCCCCCcccCCccc--cceEEEEEEeEEcC
Confidence 6889999999999987 8999998764 36788999998754
No 172
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=21.63 E-value=40 Score=22.34 Aligned_cols=22 Identities=27% Similarity=0.593 Sum_probs=16.1
Q ss_pred EEEEcCCCeEee----CCCceeeeee
Q 016948 277 ECTVNAGEILYL----PSMWFHHVRQ 298 (380)
Q Consensus 277 ~~~L~pGD~Lfi----P~gWwH~V~~ 298 (380)
+..+++||+|.| ..+||.-...
T Consensus 17 eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 456788888888 6789876544
No 173
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=20.77 E-value=39 Score=27.74 Aligned_cols=23 Identities=13% Similarity=0.277 Sum_probs=16.9
Q ss_pred EEcCCCeEeeCCC-ceeeeeecCC
Q 016948 279 TVNAGEILYLPSM-WFHHVRQSPD 301 (380)
Q Consensus 279 ~L~pGD~LfiP~g-WwH~V~~l~d 301 (380)
.++|||+||++.+ .-|...-+++
T Consensus 7 ~~~pGDlv~~~~~~~~H~gIYvG~ 30 (137)
T 4dpz_X 7 RPRLGDLIEISRFGYAHWAIYVGD 30 (137)
T ss_dssp CCCTTCEEEEECSSSEEEEEEEET
T ss_pred cCCCCCEEEEeCCCCCEEEEEeCC
Confidence 5889999998754 4577666654
No 174
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=20.61 E-value=1.5e+02 Score=26.92 Aligned_cols=42 Identities=12% Similarity=0.343 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecC
Q 016948 273 PKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDM 315 (380)
Q Consensus 273 ~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~ 315 (380)
.....+.++|||+|++=..-||....... +..=.++.+.|..
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s-~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKT-QGFRKAISCHFAS 254 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCS-SSCEEEEEEEEEE
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCC-CCceEEEEEEEEC
Confidence 45688999999999999999999875421 2445555554443
Done!