BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016953
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/376 (89%), Positives = 360/376 (95%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
M+IS+Q DI G+RQ+GQDVRTQNVMACQAV+NIVK+SLGPVGLDKMLVDDIGDVTITND
Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATIL+MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI
Sbjct: 61 GATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
ISGYRLAMRE+CKY+ EKL KVEKLGK L+NCAKTSMSSKLI GDSDFFANLVVEAV
Sbjct: 121 ISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVL 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
+VKMTNQRGE+KYPIKGINILKAHG+SARDSY LNGYALN RAAQGMPLRV+PAKIACL
Sbjct: 181 SVKMTNQRGEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL 300
DFNLQKTKMQLGVQV+V DPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL
Sbjct: 241 DFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL 300
Query: 301 KYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVA 360
KYFVEAGAIAVRRVRKEDMRH+AKATGAT+V+TFADMEGEETFD + LGSADEVVEER+A
Sbjct: 301 KYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIA 360
Query: 361 DDDVIMIKGTKTTSAV 376
DDDVI+IKGTKT+SAV
Sbjct: 361 DDDVILIKGTKTSSAV 376
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/369 (68%), Positives = 316/369 (85%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + GER G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTSII GYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LGKD L+N AKTSMSSK+IG D DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDV 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
+G+ +YP+ IN+LKAHG+S ++S +NGYALN A+QGMP R+ AKIACLDF+LQKT
Sbjct: 185 KGQPRYPVNSINVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IR+READ+TKERI+K+L GANVILTT GIDDM LKYFVE+
Sbjct: 245 KMKLGVQVVITDPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESM 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
IAVRRV K D++ IAKA+GAT++ST A +EGEE+F++S+LG A+EVV+ER+ DD++I+I
Sbjct: 305 TIAVRRVLKRDLKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/369 (68%), Positives = 318/369 (86%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y++E L + ++LG+D L+N AKTSMSSK+IG + DFFANLVV+AV A+K T+
Sbjct: 125 CKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ IN+LKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++ IAKA+GAT++ST A++EGEETF++S+LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|P11983|TCPA_MOUSE T-complex protein 1 subunit alpha OS=Mus musculus GN=Tcp1 PE=1 SV=3
Length = 556
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/369 (67%), Positives = 317/369 (85%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ VR+QNVMA ++ANIVKSS GPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG + D+FAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDA 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMYLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++H+AKA+GA+++ST A++EGEETF+ ++LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKHVAKASGASILSTLANLEGEETFEVTMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/369 (68%), Positives = 318/369 (86%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L V ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV A+K T+
Sbjct: 125 CKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S ++GYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++ IAKA+GAT++ST A++EGEETF++++LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/369 (68%), Positives = 318/369 (86%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y++E L + ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYISENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDL 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERIEK+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++ IAKA+GA+++ST A++EGEETF++++LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 528 bits (1359), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/376 (67%), Positives = 317/376 (84%), Gaps = 1/376 (0%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
MA L +LGER +G VR QNV A +ANIVKSSLGPVGLDKMLVDDIGDVTITND
Sbjct: 1 MAALEGPLAVLGERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATILK+LEVEHPAAKVL ELAELQD+EVGDGTTSVVI+AAELLK +++LV+ KIHPTSI
Sbjct: 61 GATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
I GYRLA +EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG D DFFA++VV+A
Sbjct: 121 IGGYRLACKEAVRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAAS 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
AVK T+Q+G+ +YPI IN+LKAHG+S ++S +NGYALN +QGM R+ AKIACL
Sbjct: 181 AVKYTDQKGQARYPINSINVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL 300
DF+LQKTKM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM L
Sbjct: 241 DFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCL 300
Query: 301 KYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVA 360
KYFV+AGA+AVRRV K+D++ IAKA+GAT+ ST A++EGEE+F++S+LG A+EVV+ERV
Sbjct: 301 KYFVDAGAMAVRRVLKKDLKRIAKASGATVCSTLANLEGEESFEASMLGQAEEVVQERVC 360
Query: 361 DDDVIMIKGTKT-TSA 375
DD++I+IK TK TSA
Sbjct: 361 DDELILIKNTKARTSA 376
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/369 (67%), Positives = 317/369 (85%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++L + KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L V ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV A+K T+
Sbjct: 125 CKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDT 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S ++GYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQMESKLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++ IAKA+GAT++ST A++EGEETF++++LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/369 (67%), Positives = 317/369 (85%), Gaps = 1/369 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGM R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV++TDP +L++IRQRE+D+TKERI+K+L GANVILTT GIDDM LKYFVEAG
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG 304
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRRV K D++ IAKA+GA+++ST A++EGEETF++++LG A+EVV+ER+ DD++I+I
Sbjct: 305 AMAVRRVLKRDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILI 364
Query: 368 KGTKT-TSA 375
K TK TSA
Sbjct: 365 KNTKARTSA 373
>sp|P12613|TCPA_DROME T-complex protein 1 subunit alpha OS=Drosophila melanogaster
GN=T-cp1 PE=2 SV=2
Length = 557
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/375 (64%), Positives = 312/375 (83%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
M+ + L I G RQ+G VRTQNVMA +++NIVKSSLGPVGLDKMLVDDIGDVT+TND
Sbjct: 1 MSTLASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATIL++LEVEHPAAKVLVELA+LQD EVGDGTTSVVI+AAELLK A++LV+ KIHPTSI
Sbjct: 61 GATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
ISGYR+A +EACKY++E L V++LG+DSL+N AKTSMSSK+IG D++FF+ +VV+A Q
Sbjct: 121 ISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQ 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
+VK+T+ RG+ Y IK IN+LKAHGKSAR+S + GYALN A+Q MP ++ AKIACL
Sbjct: 181 SVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL 300
DF+LQKTKM++GVQVL+ DP +LE IR RE D+TKERI +L G NV+L + G+DD+ +
Sbjct: 241 DFSLQKTKMKMGVQVLINDPDKLEAIRARELDITKERINMILGTGVNVVLVSGGVDDLCM 300
Query: 301 KYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVA 360
KYFVEAGA+AVRRV+K D++ IAKATGA +++ +M+GEE+FD+S++G A EV +ER+
Sbjct: 301 KYFVEAGAMAVRRVKKSDLKIIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQERIC 360
Query: 361 DDDVIMIKGTKTTSA 375
DD++I+IKGTK +A
Sbjct: 361 DDELILIKGTKARAA 375
>sp|O94501|TCPA_SCHPO T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct1 PE=3 SV=1
Length = 556
Score = 510 bits (1314), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/369 (65%), Positives = 312/369 (84%)
Query: 7 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK 66
TL + GE+ +G+DVR QNV+A A+AN+VKSSLGPVGLDKMLVDDIGDVT+TNDGATIL
Sbjct: 9 TLFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILS 68
Query: 67 MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126
+L+VEHPA KVLVELA+ QD+EVGDGTTSVVI+AAELL+RAN+LV+NKIHPT+II+GYRL
Sbjct: 69 LLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRL 128
Query: 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTN 186
A+REA K++ + L+ V+ LGK+SL+N AKTSMSSK+IG DSDFF+ + V+A+ +VK +N
Sbjct: 129 AIREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSN 188
Query: 187 QRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQK 246
+GE +YP+K +NILKAHGKS+R+S + GYALN A+Q M RV AKIA LD +LQK
Sbjct: 189 SKGETRYPVKAVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQK 248
Query: 247 TKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEA 306
TKM LGV V + DP +LEKIR+RE +T ER++K+L AGANVILTTKGIDD+ LK +EA
Sbjct: 249 TKMALGVHVTIDDPDQLEKIREREVMITLERVKKILNAGANVILTTKGIDDLCLKSIIEA 308
Query: 307 GAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIM 366
GA+AVRR +KED+R IAKA+GAT++S+ +++EGEETF+SS LGSA+EVV+E+ +DD+ I+
Sbjct: 309 GAMAVRRCKKEDLRRIAKASGATLLSSLSNLEGEETFESSYLGSAEEVVQEKFSDDECIL 368
Query: 367 IKGTKTTSA 375
+KGTK S+
Sbjct: 369 VKGTKAYSS 377
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/368 (64%), Positives = 303/368 (82%), Gaps = 1/368 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R GQ +R+QNV A A+ANIVKSSLGPVGLDKMLVDD+GDV +TNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPA KVLVELA+LQD EVGDGTTSVVIVAAELLKRA++LV+ K+HPT+II+GYRLA
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA KY++E ++ + +G+ S+VN AKTSMSSK+IG D+DFF LVV+A +AV++ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENN 188
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
G+V YPI +N+LKAHGKSAR+S + GYALN A+Q MPLRV AKIACLDF+L K
Sbjct: 189 -GKVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKA 247
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM LG+ V+V DP +LE IR+ E D+TK RI+K+LKAGANV+LTT GIDD+ LK FVE+G
Sbjct: 248 KMHLGISVVVEDPAKLEAIRREEFDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESG 307
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRR +K D++ IAKATGAT+ + A +EG+E FD+SLLG ADE+V+ER++DD++I+I
Sbjct: 308 AMAVRRCKKSDLKRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDDELILI 367
Query: 368 KGTKTTSA 375
KG K+ +A
Sbjct: 368 KGPKSRTA 375
>sp|P12612|TCPA_YEAST T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TCP1 PE=1 SV=2
Length = 559
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/373 (62%), Positives = 308/373 (82%), Gaps = 2/373 (0%)
Query: 5 SQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATI 64
S TL + GE+ +G D+R QNV+A AVAN+VKSSLGPVGLDKMLVDDIGD T+TNDGATI
Sbjct: 10 SDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATI 69
Query: 65 LKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGY 124
L +L+V+HPA K+LVELA+ QDRE+GDGTTSVVI+A+ELLKRAN+LV+NKIHPT+II+G+
Sbjct: 70 LSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGF 129
Query: 125 RLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKM 184
R+A+REA +++NE L+ V+ LGK++L+N AKTSMSSK+IG DSDFF+N+VV+A+ AVK
Sbjct: 130 RVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKT 189
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPA--KIACLDF 242
N +GE+KYP+K +N+LKAHGKSA +S + GYALN A+Q MP R+A KIACLD
Sbjct: 190 QNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDL 249
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKY 302
NLQK +M +GVQ+ + DP +LE+IR+REA + ER++K++ AGA V+LTTKGIDD+ LK
Sbjct: 250 NLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKE 309
Query: 303 FVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADD 362
FVEA + VRR +KED+R IA+ATGAT+VS+ +++EGEETF+SS LG DEVV+ + +DD
Sbjct: 310 FVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDD 369
Query: 363 DVIMIKGTKTTSA 375
+ I+IKGT S+
Sbjct: 370 ECILIKGTSKHSS 382
>sp|Q55BM4|TCPA_DICDI T-complex protein 1 subunit alpha OS=Dictyostelium discoideum
GN=tcp1 PE=2 SV=1
Length = 548
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/373 (62%), Positives = 305/373 (81%)
Query: 3 ISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGA 62
+S++ L I G+R +G +VR QNV+A A+ANIVK+S GP+GLDKML+D+IG + +TNDGA
Sbjct: 1 MSNKVLMIDGDRISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGA 60
Query: 63 TILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIIS 122
TIL+ +++EHPAAK+LV+L+ELQD+EVGDGTT+VVI+AAELLKRAN+LV K+HPT IIS
Sbjct: 61 TILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIIS 120
Query: 123 GYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAV 182
G+RLA EA KY+NE LAVKVE L KD +VN AKTSMSSK I DSDFF+ +V+EA+ V
Sbjct: 121 GFRLACTEAIKYINETLAVKVETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRV 180
Query: 183 KMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242
K + +G+VKYPI INILKAHGKSA++S + GYALN A++GMP R+ AKIA LDF
Sbjct: 181 KTIDYKGDVKYPINAINILKAHGKSAKESTLVEGYALNCTVASEGMPKRIQGAKIAFLDF 240
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKY 302
NL KTKM+LG +V+VT+ +LE IR RE D+ KERI ++K+GANV+LTTKGIDD+ LKY
Sbjct: 241 NLAKTKMKLGQKVVVTNVNDLEAIRDRENDIVKERISLIIKSGANVVLTTKGIDDLCLKY 300
Query: 303 FVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADD 362
FVEAG +AVRR +KED++ IAK+ G T++ T A++EGEE+FD++ LG ADEVV++R+ADD
Sbjct: 301 FVEAGCMAVRRCKKEDLKRIAKSCGGTVLITLANLEGEESFDTTALGIADEVVQDRLADD 360
Query: 363 DVIMIKGTKTTSA 375
++I++K + SA
Sbjct: 361 ELIIVKNSNKKSA 373
>sp|O15891|TCPA_TETPY T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3
SV=1
Length = 547
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/365 (61%), Positives = 293/365 (80%)
Query: 7 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK 66
++ ILGER GQDVRT NV A A+ANIVKSSLGP GLDKMLVDD+GDVTITNDGATIL+
Sbjct: 4 SVGILGERDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILR 63
Query: 67 MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126
LEV+HPAAKV+VEL++LQD+EVGDGTTSVVI+AAELLKRAN+L++NK+HPTSII+G+++
Sbjct: 64 QLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKI 123
Query: 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTN 186
A +EAC Y+ E LA+ VE+LG+++L+N AKTSMSSKLIG +S+ F+ +VV+AV++VKMTN
Sbjct: 124 AAKEACTYIKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTN 183
Query: 187 QRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQK 246
G+ KYPIK + I+K+HG+S S + GY L R Q M R+ AKIA LDFNL K
Sbjct: 184 LMGDTKYPIKNVKIIKSHGQSTLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALLDFNLNK 243
Query: 247 TKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEA 306
++Q+G+Q+LV DP+ LEKIR +E ++ KER +K+++AGANVI+T+ G+DD+A KY VEA
Sbjct: 244 FRLQMGIQILVNDPKNLEKIRFKECEILKERCKKIIEAGANVIITSAGMDDVATKYLVEA 303
Query: 307 GAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIM 366
G + +RRV K D+R +AKATG T+V+T A EG+E F++S LG EV EE V D+D I
Sbjct: 304 GVMGLRRVDKHDLRRLAKATGGTIVTTLATPEGDEVFEASYLGECAEVYEEAVGDNDCIF 363
Query: 367 IKGTK 371
KGTK
Sbjct: 364 FKGTK 368
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/364 (61%), Positives = 292/364 (80%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + GER +G+ VR QNV+A + AN VK+SLGPVGLDKMLVDD+GDVTITNDGATILK+
Sbjct: 2 LTLGGERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKL 61
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
L+VEHPAAK+LV+LA+LQD EVGDGTTSVVI+AA LLK A++L+ +HPT++I+GYRLA
Sbjct: 62 LDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLA 121
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
REACKY+ E +A V KLGK L+N A+T+MSSKLI D+D F+ + V+A+ AV+++
Sbjct: 122 CREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGG 181
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
YPIK +NILKAHG+S +S ++GYALN A+Q MP + AKIA LDF+LQK
Sbjct: 182 PKGPVYPIKAVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFLDFSLQKV 241
Query: 248 KMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAG 307
KM+LGVQV+V DP +LE IRQREAD+TKERI+K+L AGANVILTT GIDD+ +KYFVE
Sbjct: 242 KMKLGVQVVVKDPAQLEAIRQREADITKERIQKILNAGANVILTTGGIDDLCMKYFVEVN 301
Query: 308 AIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMI 367
A+AVRR +K D++++AKATG ++ + ADMEG+E FD + LG+A+EV +ER+ DD++I++
Sbjct: 302 AMAVRRCKKVDLKNMAKATGGQLIVSLADMEGDEVFDPTKLGNAEEVSQERICDDELIIL 361
Query: 368 KGTK 371
+G K
Sbjct: 362 RGPK 365
>sp|Q8SSC9|TCPA_ENCCU T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi
(strain GB-M1) GN=TCP1 PE=1 SV=1
Length = 540
Score = 315 bits (806), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 245/367 (66%), Gaps = 4/367 (1%)
Query: 7 TLDIL--GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATI 64
T DIL GE +G +N A V N +K+S GP+GLDKM VD G+V+ITNDGATI
Sbjct: 7 TADILSGGESYSGISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATI 66
Query: 65 LKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGY 124
L+ + ++ PAAK+LV+LA QD EVGDGTTSVV++A L+++ L+ + +HP+ ++SGY
Sbjct: 67 LQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGY 126
Query: 125 RLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKM 184
++A E +++ + ++ LG +L N +TS+SSK+I +S+ F +V++A++ ++
Sbjct: 127 KMAFNECVQFIKKSMSKSTLNLGSKALRNVVETSISSKVISSESEVFCGIVIDALKCIES 186
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNL 244
++ + YPI+ INILK G S ++S+ GYALN A+ M +V KI C+DF L
Sbjct: 187 VDENRKNMYPIEDINILKHPGGSMKESFLHQGYALNCSLASNFMKRQVKKPKILCIDFGL 246
Query: 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFV 304
QK K L V ++V DP +LE IR++E ++T+ +I+ ++ +GANV+LTT+GIDDM K V
Sbjct: 247 QKYKNPLTVSIVVDDPNKLEDIRKKELEITRRQIKTIIDSGANVVLTTRGIDDMCTKLLV 306
Query: 305 EAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDV 364
EA + +RR +KED+ IAKATG ++VS+ AD+ G ++ S LG AD+ ++ +++
Sbjct: 307 EADVVGIRRCKKEDLLVIAKATGTSLVSSIADISGADSISS--LGFADKFEVVQIGEEEC 364
Query: 365 IMIKGTK 371
++I G K
Sbjct: 365 VLINGLK 371
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 230/370 (62%), Gaps = 12/370 (3%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + +A V+S+LGP G+DKMLVD +GDV ITNDG TILK ++VEH
Sbjct: 17 QRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEH 76
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+++E+A+ QD EVGDGTT+ V++A ELLKRA +L+ +IHP I +GYR A +A
Sbjct: 77 PAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKAL 136
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQR--GE 190
+ +NE +A+ + K + L A T+M+ K D A + AV AVKM + G+
Sbjct: 137 EILNE-IAIPISKDDDEILKKIATTAMTGKGAEVAIDKLAEI---AVNAVKMIAEESNGQ 192
Query: 191 VKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
V+ I I K G S ++ ++G L+ GMP RV AKI LD L+ + +
Sbjct: 193 VEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETE 252
Query: 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIA 310
+ ++ +TDP +L+K ++E M KE ++K++ AGANV+ KGIDD+A Y +AG +A
Sbjct: 253 IDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQYYLAKAGVLA 312
Query: 311 VRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGT 370
VRRV+K DM +AKATGA +++ D+ E+ LG A V E +V D+ ++ + G
Sbjct: 313 VRRVKKSDMEKLAKATGAKVLTDLRDISSED------LGEAALVEERKVGDEKMVFVTGC 366
Query: 371 KTTSAVCGLI 380
K AV L+
Sbjct: 367 KNPKAVTILV 376
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 271 bits (694), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 234/369 (63%), Gaps = 10/369 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D N++A +A++ ++K++ GP G+DKMLVD +GDVTITNDGATIL E++H
Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQH 60
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV++A+ QD EVGDGT VI+A ELLK A +L+ IHPT IISGYR+AM EA
Sbjct: 61 PAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEAL 120
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
K +++ +A ++ ++ L A+TS++SK + +FFA++ V+AV+ V +RG+
Sbjct: 121 KILDQ-MAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQV--VEKRGDKN 177
Query: 193 Y-PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
Y + I I+K +G + DS + G L+ GMP RV AKI LD L+ K ++
Sbjct: 178 YVDLDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEI 237
Query: 252 GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAV 311
++ + DP +LEK Q+E ++ + ++K+ GANV++ KGID++A + + G +AV
Sbjct: 238 DAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAV 297
Query: 312 RRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK 371
RRV++ D+ + +ATG +VS D+ E+ LG A V E +V +D ++ I+G K
Sbjct: 298 RRVKRSDLEKLERATGGRIVSNIEDLTPED------LGYAALVEERKVGEDKMVFIEGCK 351
Query: 372 TTSAVCGLI 380
+V +I
Sbjct: 352 NPRSVSIVI 360
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 271 bits (693), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 234/369 (63%), Gaps = 10/369 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G++ N+MA +A+A I+K++ GP G+DKMLVD +GD+TITN+GATIL ++V H
Sbjct: 24 QRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAH 83
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV++++ Q+ E GDGT + VI A ELLK A L+ IHPT I+ GY+ A+R+A
Sbjct: 84 PAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKAS 143
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E +A V + L AKTS++SK + D+FA L VEAV+ V +RG+
Sbjct: 144 EVI-ESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTV--AERRGDRW 200
Query: 193 Y-PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
Y + I I+K HG S RD+ + G L+ MP RV A+IA LD L+ K ++
Sbjct: 201 YVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEI 260
Query: 252 GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAV 311
+++ +T P +++ + +++ + +E+IEK+ GANV++T KGIDD+A + + G +AV
Sbjct: 261 DLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQHFLAKKGILAV 320
Query: 312 RRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK 371
RRV++ D+ IA+ATGA +V+ D+ E+ LG A+ V E +V +D ++ I+G K
Sbjct: 321 RRVKRSDIEKIARATGARIVTDIEDLRPED------LGYAELVEERKVGEDKMVFIEGAK 374
Query: 372 TTSAVCGLI 380
+V L+
Sbjct: 375 NPKSVTILL 383
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 232/369 (62%), Gaps = 12/369 (3%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R+ G++ + N+ A +A+A+ V+++LGP G+DKMLVD IGD+ I+NDGATILK ++VEH
Sbjct: 16 QREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEH 75
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
P AK++VE+++ QD VGDGTT+ V+++ ELLK+A L+ +HPT I +GYRLA+ EA
Sbjct: 76 PTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEAR 135
Query: 133 KYVNEKLAVKVEKLGKD-SLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEV 191
K ++E EK D +L A T++S K G +DF A+LVV+AV AV + G+
Sbjct: 136 KIIDE----IAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV-RDGKT 190
Query: 192 KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
I + K +G S D+ F++G ++ + MP V AKIA +D L+ K ++
Sbjct: 191 IVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEI 250
Query: 252 GVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAV 311
+V ++DP +++ +E + K+ +EK+ K+GANV+L KGIDD+A Y + G AV
Sbjct: 251 EAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAV 310
Query: 312 RRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTK 371
RRV+K DM +AKATGA +V+ D+ S+LG A+ V E ++ DD + + G K
Sbjct: 311 RRVKKSDMEKLAKATGAKIVTDLDDLT------PSVLGEAETVEERKIGDDRMTFVMGCK 364
Query: 372 TTSAVCGLI 380
AV LI
Sbjct: 365 NPKAVSILI 373
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 240/381 (62%), Gaps = 11/381 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA ++A + ++ +A +V+ ++ L+ A T+++ K + ++ A L VEAV
Sbjct: 124 IIKGYTLASQKAQEILD-SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G++K I I + K G + RD+ + G ++ GMP R+ AKIA
Sbjct: 183 KLV-AEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
++ L+ + + ++ +T P +L+ ++E M KE ++K+ + GANV+ KGIDD+A
Sbjct: 242 INDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLA 301
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V E +V
Sbjct: 302 QHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPED------LGEAELVEERKV 355
Query: 360 ADDDVIMIKGTKTTSAVCGLI 380
A +++I ++G K AV LI
Sbjct: 356 AGENMIFVEGCKNPKAVTILI 376
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 233/381 (61%), Gaps = 11/381 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
I+ Q + IL E R++G+D +N+ A A++N V+SSLGP G+DKMLVD +GD+ ITN
Sbjct: 2 IAGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITN 61
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DG TILK ++VEHPAAK++VE+++ QD VGDGTT+ VI+A LL++A L+ +HPT
Sbjct: 62 DGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTV 121
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
I GYR+A EA + ++E ++ K+ K L+ A+TS++SK D A + EAV
Sbjct: 122 ISEGYRMASEEAKRVIDE-ISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAV 180
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
++V + G+ I ++K G + D+ +NG ++ + GMP V AKIA
Sbjct: 181 KSVAEL-RDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIAL 239
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
LD L+ K + + + DP ++K +E +M +E ++K+ GANV++T KGIDDMA
Sbjct: 240 LDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMA 299
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y AG AVRRV+K DM +AKATGA++VST + SS LG+A+ V + +V
Sbjct: 300 QHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTI------DEISSSDLGTAERVEQVKV 353
Query: 360 ADDDVIMIKGTKTTSAVCGLI 380
+D + + G K AV L+
Sbjct: 354 GEDYMTFVTGCKNPKAVSILV 374
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 235/368 (63%), Gaps = 8/368 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + VA V+++LGP+G+DKMLVD++GDV +TNDG TIL+ +++EH
Sbjct: 19 QRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEH 78
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK++VE+A+ Q+ EVGDGTT+ V++A ELL +A DL++ IHPT I GYR+A+ E
Sbjct: 79 PAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAV-EKA 137
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E++A +++ +++L AKT+M+ K + D+ A LVV+AV+ V + GE+
Sbjct: 138 EEILEEIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQVA-EEEDGEIV 196
Query: 193 YPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
I + K G D+ + G ++ R GMP RV AKIA L+ ++ + +
Sbjct: 197 IDTDHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETD 256
Query: 253 VQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR 312
++ +TDP +L+ + E M E ++K+ + GANV+ KGIDD+A Y + G +AVR
Sbjct: 257 AEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHYLAKKGILAVR 316
Query: 313 RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKT 372
RV+K DM+ +A+ATGA +V+ D+ E+ LG A+ V E++VA D +I ++G K
Sbjct: 317 RVKKSDMQKLARATGARIVTNIDDLSEED------LGEAEVVEEKKVAGDKMIFVEGCKD 370
Query: 373 TSAVCGLI 380
AV LI
Sbjct: 371 PKAVTILI 378
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 233/370 (62%), Gaps = 12/370 (3%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + +A VKS+LGP G+DKMLVD +GDV ITNDG TILK ++VEH
Sbjct: 17 QRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEH 76
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+++E+A+ QD EVGDGTT+ V++A ELLK+A +L+ IHPT I GYR+A +A
Sbjct: 77 PAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAV 136
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E +A+ ++ +++L A T+++ K D ++LVVEAV+ V ++ + +
Sbjct: 137 EIL-ESIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRV---AEKVDDR 192
Query: 193 YPI--KGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
Y + I + K G S D+ +NG ++ GMP RV AKIA L L+ + +
Sbjct: 193 YKVDEDNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETE 252
Query: 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIA 310
++ +TDP +L K ++E M KE +++L +AGANV+ KGIDD+A Y +AG +A
Sbjct: 253 TDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYYLAKAGILA 312
Query: 311 VRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGT 370
VRRV++ D+ IAKA GA +++ ++ S+ LG A+ V E +V D+ ++ I+G
Sbjct: 313 VRRVKQSDIEKIAKACGAKIITDLREI------TSADLGEAELVEERKVGDEKMVFIEGC 366
Query: 371 KTTSAVCGLI 380
K AV LI
Sbjct: 367 KNPKAVTILI 376
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 235/385 (61%), Gaps = 12/385 (3%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA + + IL E R G++ N++A + +A ++KSSLGP GLDKMLVD GD+T+
Sbjct: 1 MAATGYPVLILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITV 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDGATI+K +E++HPAAK+LVE+A+ QD EVGDGTTSVV++A LL++A L+ +HP
Sbjct: 61 TNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLI--GGDSDFFANLV 175
T II GY AM EA + V+E AV VE L A+T+++SK + G + D ++V
Sbjct: 121 TIIIEGYTKAMEEALRLVDEA-AVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMV 179
Query: 176 VEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPA 235
++A++ V G + + + I K G S DS + G L+ MP RV A
Sbjct: 180 IDAIRTVAEKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENA 239
Query: 236 KIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI 295
KI LD L+ K +L ++ VTD +LE + E M ++ +EK+ GANV++T KGI
Sbjct: 240 KILVLDAPLEVQKPELTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQKGI 299
Query: 296 DDMALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVV 355
D++A + + G +AVRRV++ D+ +AKATGA +V++ D++ E LG A+ V
Sbjct: 300 DEVAQHFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPE------YLGYAELVE 353
Query: 356 EERVADDDVIMIKGTKTTSAVCGLI 380
E +V +D ++ I+G K +V L+
Sbjct: 354 ERKVGEDKMVFIEGAKNPKSVTILL 378
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 225/376 (59%), Gaps = 16/376 (4%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R +G+D N++A +A ++KSSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL +A +L+ +HPT II GY+ A+ +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALE 133
Query: 134 YVNEKLAVKVE------KLGKDSLVNCAKTSMSSKLIGGDS---DFFANLVVEAVQAVKM 184
+++ L++K++ K L T+MSSK I G + D +LV++A+ V
Sbjct: 134 IIDQ-LSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAE 192
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNL 244
G P+ I I K G S DS ++G L+ GMP RV AKIA LD L
Sbjct: 193 KRPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAAL 252
Query: 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFV 304
+ K ++ ++ +T P +++ EA KE ++KL GANV++ KGIDD+A +
Sbjct: 253 EVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQKGIDDVAQHFLA 312
Query: 305 EAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDV 364
+ G +AVRRV++ D+ + KA GA ++S+ D E+ LG A+ V E R+ +D +
Sbjct: 313 KKGILAVRRVKRSDIEKLEKALGARIISSIKDATPED------LGYAELVEERRIGNDKM 366
Query: 365 IMIKGTKTTSAVCGLI 380
+ I+G K AV L+
Sbjct: 367 VFIEGAKNPRAVNILL 382
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 264 bits (674), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 236/381 (61%), Gaps = 11/381 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
+I GY LA +A + ++ +A +V+ ++ L+ A T+++ K + ++ A L VEAV
Sbjct: 124 VIKGYMLAAEKAQEILD-SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ K I I K G + D+ + G ++ GMP RV AKIA
Sbjct: 183 KLV-AEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
++ L+ + + ++ +T P +L+ ++E M KE ++K+ + GANV+ KGIDD+A
Sbjct: 242 INDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLA 301
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V E +V
Sbjct: 302 QHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPED------LGEAELVEERKV 355
Query: 360 ADDDVIMIKGTKTTSAVCGLI 380
A +++I ++G K AV LI
Sbjct: 356 AGENMIFVEGCKNPKAVTILI 376
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 236/382 (61%), Gaps = 13/382 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGEV-KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + GE K + I K G S +D+ + G ++ GMP RV AKIA
Sbjct: 183 KQV--AEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDM 298
++ L+ + + ++ +T P +L+ ++E M +E ++K+ + GANV+ KGIDD+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDL 300
Query: 299 ALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEER 358
A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V + +
Sbjct: 301 AQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPED------LGEAELVEQRK 354
Query: 359 VADDDVIMIKGTKTTSAVCGLI 380
VA +++I ++G K AV LI
Sbjct: 355 VAGENMIFVEGCKNPKAVTILI 376
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 236/382 (61%), Gaps = 13/382 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGEV-KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + GE K + I K G S +D+ + G ++ GMP RV AKIA
Sbjct: 183 KQV--AEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDM 298
++ L+ + + ++ +T P +L+ ++E M +E ++K+ + GANV+ KGIDD+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDL 300
Query: 299 ALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEER 358
A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V + +
Sbjct: 301 AQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPED------LGEAELVEQRK 354
Query: 359 VADDDVIMIKGTKTTSAVCGLI 380
VA +++I ++G K AV LI
Sbjct: 355 VAGENMIFVEGCKNPKAVTILI 376
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 257 bits (657), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 227/376 (60%), Gaps = 15/376 (3%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R +G+D N++A +A ++KSSLGP GLDKML+D GDVTITNDGATI+K +E++H
Sbjct: 14 QRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQH 73
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LVE A+ QD EVGDGTTS V++A LL +A+DL+ IHPT II GY+ A+ ++
Sbjct: 74 PAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSL 133
Query: 133 KYVNEKLAVKVEKLG------KDSLVNCAKTSMSSKLIGG--DSDFFANLVVEAVQAVKM 184
+ +++ LA K++ +D L T+MSSK I G + D N+V++AV V
Sbjct: 134 EIIDQ-LATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAE 192
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNL 244
G P+ I I K G S DS ++G L+ GMP RV AKIA LD L
Sbjct: 193 PLPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAAL 252
Query: 245 QKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFV 304
+ K ++ ++ +T P +++ EA K+ ++KL GANV++ KGIDD+A +
Sbjct: 253 EVEKPEISAKISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVVICQKGIDDVAQHFLA 312
Query: 305 EAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDV 364
+ G +AVRRV++ D+ + KA GA ++S+ D E+ LG A+ V E RV +D +
Sbjct: 313 KKGILAVRRVKRSDIEKLEKALGARIISSIKDATPED------LGYAELVEERRVGNDKM 366
Query: 365 IMIKGTKTTSAVCGLI 380
+ I+G K AV L+
Sbjct: 367 VFIEGAKNPKAVNILL 382
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 238/383 (62%), Gaps = 17/383 (4%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA Q + +L E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +
Sbjct: 1 MAQGQQPILVLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVV 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDG TILK +++EHPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK+A +L+ +IHP
Sbjct: 61 TNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVE 177
T I GYR A +A + +++ + ++ +D+L+ A T+M+ K + A L+V+
Sbjct: 121 TIIAMGYRQAAEKAQEILDD---IAIDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVD 177
Query: 178 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AV+ V+ + GEV+ I I K G + DS + G ++ R GMP +V AKI
Sbjct: 178 AVKQVE---EDGEVEK--DHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKI 232
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDD 297
A L+ ++ + ++ ++ +TDP +++ ++E M ++ + ++ GANV+ KGIDD
Sbjct: 233 ALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDD 292
Query: 298 MALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEE 357
+A Y +AG +AVRRV+K DM ++KATGA +V+ D+ E+ LG A V E+
Sbjct: 293 LAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPED------LGEAGVVSEK 346
Query: 358 RVADDDVIMIKGTKTTSAVCGLI 380
+++ +++I ++ K AV L+
Sbjct: 347 KISGEEMIFVEECKEPKAVTILV 369
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 256 bits (653), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 227/368 (61%), Gaps = 10/368 (2%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +AV +K++ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 25 RTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 84
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LV++A+ QD E DGT + VI + EL+K+A +L+ +IHPT I+SGY+ A A K
Sbjct: 85 AAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIK 144
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E+++ KV + L A TS+SSK + G + A++VV+A+ V RG+ Y
Sbjct: 145 TI-EEISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQV--AELRGDKWY 201
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP RV AKIA LD +L+ K +L
Sbjct: 202 VDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPELD 261
Query: 253 VQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR 312
++ + DP +++K E ++ KE+++K+ + GANV++ KGID++A Y + G +AVR
Sbjct: 262 AEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANVVICQKGIDEVAQHYLAKKGILAVR 321
Query: 313 RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKT 372
R +K D+ +A+ATG +VS ++ ++ LG A V E ++ +D ++ I+G K
Sbjct: 322 RAKKSDLEKLARATGGRVVSNIDELTSQD------LGYATLVEERKIGEDKMVFIEGAKN 375
Query: 373 TSAVCGLI 380
AV LI
Sbjct: 376 PKAVSILI 383
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 254 bits (650), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 222/368 (60%), Gaps = 10/368 (2%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +A+ +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 83
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K
Sbjct: 84 TGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALK 143
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E +A V D L A TS+ SK + G ++ A+LVV+AV V RG+ Y
Sbjct: 144 TIQE-IAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV--AELRGDKWY 200
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP R+ AKIA LD +L+ K +L
Sbjct: 201 VDLDNVQIVKKHGGSVNDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELD 260
Query: 253 VQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR 312
++ + DP ++ K + E ++ KE+++K+ GANV++ KGID++A Y + G +AVR
Sbjct: 261 AEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVR 320
Query: 313 RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKT 372
R +K D+ +A+ATG ++S ++ ++ LG A V E +V +D ++ ++G K
Sbjct: 321 RAKKSDLEKLARATGGRVISNIDELTSQD------LGYAALVEERKVGEDKMVFVEGAKN 374
Query: 373 TSAVCGLI 380
+V LI
Sbjct: 375 PKSVSILI 382
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 254 bits (649), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 233/382 (60%), Gaps = 13/382 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + VA ++++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA E + + E +A +V ++L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAA-EKAQEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGE-VKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + G+ K + I K G S ++ + G ++ GMP RV AKIA
Sbjct: 183 RQV--AEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDM 298
++ L+ + + ++ +T P +L+ ++E M +E ++K+ + GANV+ KGIDD+
Sbjct: 241 LINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDL 300
Query: 299 ALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEER 358
A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V + +
Sbjct: 301 AQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPED------LGEAELVEQRK 354
Query: 359 VADDDVIMIKGTKTTSAVCGLI 380
VA +++I ++G K AV LI
Sbjct: 355 VAGENMIFVEGCKNPKAVTILI 376
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 238/380 (62%), Gaps = 14/380 (3%)
Query: 4 SSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
++Q + +L E R G+D + N++A + + V+S+LGP G+DKMLVDD+GD+ +TND
Sbjct: 3 ANQPVVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTND 62
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
G TILK + VEHPAAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ +HPT +
Sbjct: 63 GVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIV 122
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
I GY+LA+++A + + E +A+ V+ K+ L A TS++ K + ++VEAV
Sbjct: 123 IKGYQLAVQKAQEVLKE-IAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVT 181
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
AV ++ G+V + I I K G S ++ +NG ++ R + MP ++ AKIA L
Sbjct: 182 AV--VDESGKVDKDL--IKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALL 237
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMAL 300
+ ++ + + ++ +TDP +L + ++E M K+ ++ + +GANV+ KGIDD+A
Sbjct: 238 NCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQ 297
Query: 301 KYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVA 360
Y + G +AVRRV+K DM ++KATGA +V+ D++ E+ LG A V E ++A
Sbjct: 298 HYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAED------LGEAGIVEERKIA 351
Query: 361 DDDVIMIKGTKTTSAVCGLI 380
D +I ++ K AV LI
Sbjct: 352 GDAMIFVEECKHPKAVTMLI 371
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 233/381 (61%), Gaps = 11/381 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A++V+ +++L+ A TS++ K + A L VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ + I K G+ +S + G ++ MP RV AKIA
Sbjct: 183 KQV-AEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD+A
Sbjct: 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLA 301
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V E ++
Sbjct: 302 QHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEVVEERKL 355
Query: 360 ADDDVIMIKGTKTTSAVCGLI 380
A +++I ++G K AV LI
Sbjct: 356 AGENMIFVEGCKNPKAVTILI 376
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 233/381 (61%), Gaps = 11/381 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A++V+ +++L+ A TS++ K + A L VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ + I K G+ +S + G ++ MP RV AKIA
Sbjct: 183 KQV-AEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD+A
Sbjct: 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLA 301
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V E ++
Sbjct: 302 QHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEVVEERKL 355
Query: 360 ADDDVIMIKGTKTTSAVCGLI 380
A +++I ++G K AV LI
Sbjct: 356 AGENMIFVEGCKNPKAVTILI 376
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 221/371 (59%), Gaps = 15/371 (4%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALE 133
Query: 134 YVNEKLAVKVE------KLGKDSLVNCAKTSMSSKLI--GGDSDFFANLVVEAVQAVKMT 185
+ + L +++ + +D+L A T+++SK I G + + ++V++A+ V
Sbjct: 134 LLPQ-LGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEP 192
Query: 186 NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQ 245
G + I I K G S DS + G L+ GMP RV AKIA LD L+
Sbjct: 193 LPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALE 252
Query: 246 KTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVE 305
K ++ ++ +T P +++ E+ K+ ++KL GANV++ KGIDD+A + +
Sbjct: 253 VEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAK 312
Query: 306 AGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVI 365
G +AVRRV++ D+ + KA GA ++S+ D E+ LG A+ V E RV +D ++
Sbjct: 313 KGILAVRRVKRSDIEKLEKALGARIISSIKDATPED------LGYAELVEERRVGNDKMV 366
Query: 366 MIKGTKTTSAV 376
I+G K AV
Sbjct: 367 FIEGAKNLKAV 377
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 221/368 (60%), Gaps = 10/368 (2%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +A+ +KS+ GP G+DKM VD +GD+TITNDGATIL ++++HP
Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHP 83
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K
Sbjct: 84 TGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALK 143
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ + +A V D L A TS+ SK + G ++ A+LVV+AV V RG+ Y
Sbjct: 144 TIQD-IAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV--AELRGDKWY 200
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP R+ AKIA LD +L+ K +L
Sbjct: 201 VDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELD 260
Query: 253 VQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR 312
++ + DP ++ K + E ++ KE+++K+ GANV++ KGID++A Y + G +AVR
Sbjct: 261 AEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVR 320
Query: 313 RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKT 372
R +K D+ +A+ATG ++S ++ ++ LG A V E +V +D ++ ++G K
Sbjct: 321 RAKKSDLEKLARATGGRVISNIDELTSQD------LGYAALVEERKVGEDKMVFVEGAKN 374
Query: 373 TSAVCGLI 380
+V LI
Sbjct: 375 PKSVSILI 382
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 251 bits (640), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 232/383 (60%), Gaps = 15/383 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA E + + E++A+KV +++L+ A TS++ K + A L AV
Sbjct: 124 IIKGYALAA-EKAQEILEEIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKL---AV 179
Query: 180 QAVKMTNQRGEVKY--PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AVK ++ + KY + I K G+ +S + G ++ MP RV AKI
Sbjct: 180 DAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKI 239
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDD 297
A ++ L+ K + ++ +T P +L ++E M K+ ++ + + GANV+ KGIDD
Sbjct: 240 ALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDD 299
Query: 298 MALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEE 357
+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V E
Sbjct: 300 LAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPED------LGYAEIVEER 353
Query: 358 RVADDDVIMIKGTKTTSAVCGLI 380
++A +++I ++G K AV LI
Sbjct: 354 KLAGENMIFVEGCKNPKAVTILI 376
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 251 bits (640), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 223/375 (59%), Gaps = 15/375 (4%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALE 133
Query: 134 YVNEKLAVKVE------KLGKDSLVNCAKTSMSSKLI--GGDSDFFANLVVEAVQAVKMT 185
+ + L +++ + +D+L A T+++SK I G + + ++V++A+ V
Sbjct: 134 LLPQ-LGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEP 192
Query: 186 NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQ 245
G + I I K G S DS + G L+ GMP RV AKIA LD L+
Sbjct: 193 LPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALE 252
Query: 246 KTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVE 305
K ++ ++ +T P +++ E+ K+ ++KL GANV++ KGIDD+A + +
Sbjct: 253 VEKPEISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQKGIDDIAQHFLAK 312
Query: 306 AGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVI 365
G +AVRRV++ D+ + KA GA ++S+ D ++ LG A+ V E RV +D ++
Sbjct: 313 KGILAVRRVKRSDIEKLEKALGARIISSIKDATPDD------LGYAELVEERRVGNDKMV 366
Query: 366 MIKGTKTTSAVCGLI 380
I+G K AV L+
Sbjct: 367 FIEGAKNLKAVNILL 381
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 232/382 (60%), Gaps = 13/382 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++ +A V+ ++ L A T+++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILD-SIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAV 182
Query: 180 -QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
Q + R V + I K G S +D+ + G ++ GM RV AKIA
Sbjct: 183 KQVAEKVGDRYHVD--LDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDM 298
++ L+ + + ++ +T P +L+ ++E M +E ++K+ + GANV+ KGIDD+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDL 300
Query: 299 ALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEER 358
A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A+ V + +
Sbjct: 301 AQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPED------LGEAELVEQRK 354
Query: 359 VADDDVIMIKGTKTTSAVCGLI 380
VA +++I ++G K AV LI
Sbjct: 355 VAGENMIFVEGCKNPKAVTILI 376
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 233/382 (60%), Gaps = 13/382 (3%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA++ + +L + R G+D + N++A + +A V+++LGP G+DKMLVD++GD+ +
Sbjct: 1 MAMAGAPIVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVV 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDG TILK + VEHPAAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ IHP
Sbjct: 61 TNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVE 177
+ II+GY +A +A + + +A +V+ + L A TS++ K + A +VVE
Sbjct: 121 SVIINGYEMARNKAVEELK-SIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVE 179
Query: 178 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AV+AV + + G+V + I + K G ++ + G ++ R MP +V AKI
Sbjct: 180 AVRAV-VDEETGKVDKDL--IKVEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKI 236
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDD 297
A L+ ++ + + ++ +TDP +L + ++E M K+ +EK+ GANV+ KGIDD
Sbjct: 237 ALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDD 296
Query: 298 MALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEE 357
+A Y + G +AVRRV+K DM +AKATGA +V+ D+ E+ LG A V E
Sbjct: 297 LAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPED------LGEAGLVEER 350
Query: 358 RVADDDVIMIKGTKTTSAVCGL 379
+VA D +I ++ K AV L
Sbjct: 351 KVAGDAMIFVEQCKHPKAVTIL 372
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 229/380 (60%), Gaps = 17/380 (4%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA Q + IL + R G++ + N++A + +A V+++LGP G+DKMLVD +GD+ I
Sbjct: 1 MAQGQQPIFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVI 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDG TIL+ +++ HPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK A L+ +HP
Sbjct: 61 TNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVE 177
T I GYR A +A + + E + +E +D+L+ A T+M+ K + A LVV+
Sbjct: 121 TIIALGYRNAALKAQEILEE---ISMEASDRDTLMKVAITAMTGKGSERAKEKLAELVVD 177
Query: 178 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AV V+ + GE+ INI + G S +S +NG ++ RA MP R+ A+I
Sbjct: 178 AVMQVE---EDGEIDK--DNINIQRIQGASVNESRIVNGIVIDKSRADTSMPKRIEKARI 232
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDD 297
A L + ++ ++ ++ +TDP +++ ++E M ++ +EK+ +GANV+ KGIDD
Sbjct: 233 ALLKYPIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDD 292
Query: 298 MALKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEE 357
+AL Y G +A++RV+K D++ I KATGA +V+ D+ E+ LG A + E+
Sbjct: 293 LALHYLSREGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAED------LGEAGVIYEK 346
Query: 358 RVADDDVIMIKGTKTTSAVC 377
++ D+ + I+ + A+
Sbjct: 347 KIFDEVLTFIEECRDPKAIS 366
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 229/368 (62%), Gaps = 10/368 (2%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +AV +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 25 RTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 84
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LV++A+ QD E DGT + VI+A EL+K+A +L+ +IHPT I+SG++ A +A K
Sbjct: 85 AAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALK 144
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E++A KV D L A TS++SK + G ++ A++V +AV V RG+ Y
Sbjct: 145 TI-EEIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQV--AELRGDRWY 201
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ I I+K HG S D+ + G ++ GMP RV AKIA LD +L+ K +L
Sbjct: 202 VDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEKPELD 261
Query: 253 VQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVR 312
++ + DP +++K + E ++ KE+++K+ GANV++ KGID++A Y + G +AVR
Sbjct: 262 AEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVR 321
Query: 313 RVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVIMIKGTKT 372
R +K D+ +A+ATG +VS ++ ++ LG A V E +V +D ++ ++G K
Sbjct: 322 RAKKSDLEKLARATGGRVVSNIDELTPQD------LGYAALVEERKVGEDKMVFVEGAKN 375
Query: 373 TSAVCGLI 380
AV LI
Sbjct: 376 PKAVSILI 383
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 222/375 (59%), Gaps = 15/375 (4%)
Query: 6 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGA 62
Q + ILGE R +GQD ++ N+ A +AVA V+++LGP G+DKMLVD G V +TNDG
Sbjct: 9 QPMIILGEDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGV 68
Query: 63 TILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIIS 122
TILK ++++HPAA ++VE++E Q+ EVGDGTT+ VI A ELL +A DL+ + +H T+I
Sbjct: 69 TILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQ 128
Query: 123 GYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAV 182
GYR A E K V E A++V + +++L A T+M+ K D + LVV+AV AV
Sbjct: 129 GYRQAA-EKAKEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDAVLAV 187
Query: 183 KMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242
K + ++I K G + +S + G ++ R + MP V A IA LD
Sbjct: 188 KDDD-----GIDTNNVSIEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDD 242
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKY 302
L+ + ++ +V VTDP +L++ +E KE +++L++ GA+ + GIDDMA Y
Sbjct: 243 ALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDMAQHY 302
Query: 303 FVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADD 362
+ G +AVRR + D++ +A+ATG +VS+ D+E ++ LG A V ++ V D
Sbjct: 303 LAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADD------LGFAGSVGQKDVGGD 356
Query: 363 DVIMIKGTKTTSAVC 377
+ I ++ + +V
Sbjct: 357 ERIFVEDVEDAKSVT 371
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 219/378 (57%), Gaps = 15/378 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+ +Q L +L E R +G+D ++ N+ A +AVA V+++LGP G+DKMLVD G+V +TN
Sbjct: 5 MGNQPLIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTN 64
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DG TILK +++EHPAA ++VE+AE Q+ EVGDGTT+ V+V+ ELL A L+ IH T+
Sbjct: 65 DGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATT 124
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
+ GYR A +A + +++ A+ V ++L A T+M+ K ++LVV AV
Sbjct: 125 LAQGYRQAAEKAKELLDDA-AIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAV 183
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
Q+V N ++ K G + +S + G ++ R ++ MP V A IA
Sbjct: 184 QSVADDNDVDTDNVKVE-----KVTGGAIENSELIEGVIVDKERVSENMPYAVEDANIAL 238
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMA 299
+D L+ + ++ +V VTDP +L+ +E + KE ++ L AGANV+ GIDDMA
Sbjct: 239 VDDGLEVQETEIDTEVNVTDPDQLQNFLDQEEEQLKEMVDALKDAGANVVFADSGIDDMA 298
Query: 300 LKYFVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERV 359
Y + G +AVRR + +D +++ATGAT VS D+E ++ LG+A V ++ +
Sbjct: 299 QHYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIE------AADLGAAGSVAQKDI 352
Query: 360 ADDDVIMIKGTKTTSAVC 377
D+ I ++ + +V
Sbjct: 353 GGDERIFVEDVEEAKSVT 370
>sp|O30560|THS2_HALVD Thermosome subunit 2 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct2 PE=1 SV=1
Length = 557
Score = 214 bits (546), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 212/349 (60%), Gaps = 10/349 (2%)
Query: 6 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGA 62
Q + I+GE R +D + N+ A +AVA V+S+LGP G+DKMLVD +GDVTITNDG
Sbjct: 9 QPMIIMGEDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGV 68
Query: 63 TILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIIS 122
TILK +++++P A+++VE+AE Q+ E GDGTT+ V +A ELLK A DL+ IHPT+II
Sbjct: 69 TILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIR 128
Query: 123 GYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAV 182
G+ LA +A + +++ +A +V+ ++ L A+TSM+ K + + A+L+V AV+ V
Sbjct: 129 GFNLASEKAREEIDD-IAERVDPDDEELLKKVAETSMTGKSSELNKELLADLIVRAVRQV 187
Query: 183 KMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242
+ G ++ ++I G+SA +S L G ++ MP++ A + L+
Sbjct: 188 TVEANDGSHVVDLENVSIETQTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNE 247
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKY 302
++ + + V + P +L+K +E K+++++++ +GA+V+ KGIDD+A Y
Sbjct: 248 PVEVEETDIDTNVSIESPDQLQKFLDQEEAQLKQKVDQIVDSGADVVFCQKGIDDLAQHY 307
Query: 303 FVEAGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSA 351
+ G +AVRR +K D+R + TGA +VS ++ ++++LG A
Sbjct: 308 LAKQGILAVRRTKKSDIRFLKNITGAAVVSDL------DSIEAAVLGRA 350
>sp|P50999|TCPD_SCHPO T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct4 PE=2 SV=2
Length = 527
Score = 207 bits (528), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 213/376 (56%), Gaps = 21/376 (5%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R+ Q+VR N+MA ++VA+ +++SLGP G+DKM+ G+V +TNDGATILK L V H
Sbjct: 13 DREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLH 72
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV+L+ QD E GDGTTSVVI+A +L A L++ IHPT I ++ A
Sbjct: 73 PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ E A+ +E ++SL+ A TS++SK++ S+ A + V+AV +K+ + R
Sbjct: 133 DCMKEN-ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAV--LKVIDPRVATN 189
Query: 193 YPIKGINILKAHGKSARDSYFLNGYAL--NAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
+K I I+K G D+ + G AL A ++A G P R+ A IA + F L K
Sbjct: 190 VDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGG-PTRIEKANIALIQFQLSPPKPD 248
Query: 251 LGVQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGI-----DDMALKYFVE 305
+ QV+V D R+++KI + E +K+ KAGANVIL K I +D+AL + +
Sbjct: 249 MENQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAK 308
Query: 306 AGAIAVRRVRKEDMRHIAKATGATMVSTFADMEGEETFDSSLLGSADEVVEERVADDDVI 365
+ ++ + ++++ I K+TG AD+ E+F LG AD V E + + ++
Sbjct: 309 LKIMVIKDIERDEVEFICKSTGC---KPIADI---ESFAEDKLGHADLVEETSSSGEKIV 362
Query: 366 MIKGT----KTTSAVC 377
G KT S +C
Sbjct: 363 KFSGVKNAGKTVSILC 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,393,015
Number of Sequences: 539616
Number of extensions: 4773150
Number of successful extensions: 21081
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 18320
Number of HSP's gapped (non-prelim): 1555
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)