BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016959
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 167/274 (60%), Gaps = 16/274 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 198
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWA--SLMFAICFAQPPEAPE-MASREFRD 331
DIWS+G+S++E +GR+P G G A L+ I PP+ P + S EF+D
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSG-SGSMAIFELLDYIVNEPPPKLPSGVFSLEFQD 257
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVN 365
F+++CL K+P R QL+ H FI R+ +V+
Sbjct: 258 FVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 291
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 166/279 (59%), Gaps = 20/279 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 179
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWA-------SLMFAICFAQPPEAPE-MAS 326
DIWS+G+S++E +GR+P + + L+ I PP+ P + S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVN 365
EF+DF+++CL K+P R QL+ H FI R+ +V+
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 164/275 (59%), Gaps = 22/275 (8%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L M N VGT +YMSPER+ G +
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM--ANEFVGTRSYMSPERL-----QGTH 182
Query: 275 DGYAGDIWSLGVSILEFYLGRF---PFAVGRQGDWASLMFAICFAQPPEAPE-MASREFR 330
DIWS+G+S++E +GR+ P A+ D+ I PP+ P + S EF+
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDY------IVNEPPPKLPSAVFSLEFQ 236
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVN 365
DF+++CL K+P R QL+ H FI R+ +V+
Sbjct: 237 DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 168/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 241
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 308 ------------SLMFAICFAQPPEAPEMA-SREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P S EF+DF+++CL K+P R QL+ H
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 361
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 362 FIKRSDAEEVD 372
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 206
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 308 ------------SLMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P + S EF+DF+++CL K+P R QL+ H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 327 FIKRSDAEEVD 337
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 179
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 308 ------------SLMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P + S EF+DF+++CL K+P R QL+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 300 FIKRSDAEEVD 310
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 179
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 308 ------------SLMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P + S EF+DF+++CL K+P R QL+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 300 FIKRSDAEEVD 310
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 179
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 308 ------------SLMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P + S EF+DF+++CL K+P R QL+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 300 FIKRSDAEEVD 310
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 169/311 (54%), Gaps = 52/311 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ +K + +G+G+GG V++V H P+ V A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYL-HKRKI 214
V + + +GEI + +E+MDGGSL+ + E IL ++ V+ GL YL K KI
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YMSPER+ G +
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-----QGTH 179
Query: 275 DGYAGDIWSLGVSILEFYLGRFP------------FAVGRQGDWA--------------- 307
DIWS+G+S++E +GR+P F +GD A
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 308 ------------SLMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQLLQHP 354
L+ I PP+ P + S EF+DF+++CL K+P R QL+ H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299
Query: 355 FILRAGQSQVN 365
FI R+ +V+
Sbjct: 300 FIKRSDAEEVD 310
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 168/316 (53%), Gaps = 58/316 (18%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNV 159
+ ++ + +G+G+GG V +V H P+ + A K+I+ + ++R+QI RE+++L + N P +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYL-HKRK 213
V + + +GEI + +E+MDGGSL E I +E IL ++ VL GLAYL K +
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE-ILGKVSIAVLRGLAYLREKHQ 135
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
I+HRD+KPSN+L+NS +K+ DFGVS L +M NS VGT +YM+PER+ G
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMAPERL-----QGT 188
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPF----------------AVGRQGDWAS--------- 308
+ DIWS+G+S++E +GR+P G +G+ S
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 248
Query: 309 ------------------LMFAICFAQPPEAPE-MASREFRDFISRCLQKDPHSRWPAAQ 349
L+ I PP+ P + + +F++F+++CL K+P R
Sbjct: 249 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKM 308
Query: 350 LLQHPFILRAGQSQVN 365
L H FI R+ +V+
Sbjct: 309 LTNHTFIKRSEVEEVD 324
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 143/258 (55%), Gaps = 11/258 (4%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G G+ G V++ + TS + A KVI E+ + + EI+IL +HPN+VK D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDA 102
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIK 220
+ + +L+E+ GG+++ + E L++ + +Q L L YLH KI+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N+L ++K+ADFGVS +T+ +S +GT +M+PE + + + + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCLQ 338
+WSLG++++E P + + ++ I ++PP P S F+DF+ +CL+
Sbjct: 223 VWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 339 KDPHSRWPAAQLLQHPFI 356
K+ +RW +QLLQHPF+
Sbjct: 280 KNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 142/258 (55%), Gaps = 11/258 (4%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G G+ G V++ + TS + A KVI E+ + + EI+IL +HPN+VK D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDA 102
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIK 220
+ + +L+E+ GG+++ + E L++ + +Q L L YLH KI+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N+L ++K+ADFGVS + + +S +GT +M+PE + + + + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCLQ 338
+WSLG++++E P + + ++ I ++PP P S F+DF+ +CL+
Sbjct: 223 VWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 339 KDPHSRWPAAQLLQHPFI 356
K+ +RW +QLLQHPF+
Sbjct: 280 KNVDARWTTSQLLQHPFV 297
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 148/275 (53%), Gaps = 26/275 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
++G GS G+V++ +H T ++ A+K + +S +I +EI I++ + P+VVK +
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 165 MYDRNGEIEVLLEYMDGGSLEGA-HIRQEHILSD----LARQVLSGLAYLHKRKIVHRDI 219
Y +N ++ +++EY GS+ +R + + D + + L GL YLH + +HRDI
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY-- 277
K N+L+N+ + K+ADFGV+ L M N +GT +M+PE I GY
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE-------IGYNC 204
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASL--MFAICFAQPPE--APEMASREFRDFI 333
DIWSLG++ +E G+ P+A D + +F I PP PE+ S F DF+
Sbjct: 205 VADIWSLGITAIEMAEGKPPYA-----DIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV 259
Query: 334 SRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+CL K P R A QLLQHPF+ A + ++L
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDL 294
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 141/258 (54%), Gaps = 11/258 (4%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G G+ G V++ + TS + A KVI E+ + + EI+IL +HPN+VK D
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDA 102
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIK 220
+ + +L+E+ GG+++ + E L++ + +Q L L YLH KI+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N+L ++K+ADFGVS + + + +GT +M+PE + + + + Y D
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCLQ 338
+WSLG++++E P + + ++ I ++PP P S F+DF+ +CL+
Sbjct: 223 VWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 339 KDPHSRWPAAQLLQHPFI 356
K+ +RW +QLLQHPF+
Sbjct: 280 KNVDARWTTSQLLQHPFV 297
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 152/275 (55%), Gaps = 16/275 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G G+ G V++ + T + A KVI E+ + I EIEIL +HP +VK
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGA 76
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIK 220
Y +G++ +++E+ GG+++ + + L++ + RQ+L L +LH ++I+HRD+K
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD-LNHGKYDGYAG 279
N+L+ ++++ADFGVS +T+ +S +GT +M+PE + + + YD Y
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKA 195
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCL 337
DIWSLG++++E P + + ++ I + PP P S EFRDF+ L
Sbjct: 196 DIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIAL 252
Query: 338 QKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
K+P +R AAQLL+HPF+ N+ LR+++
Sbjct: 253 DKNPETRPSAAQLLEHPFV---SSITSNKALRELV 284
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 152/275 (55%), Gaps = 16/275 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G G+ G V++ + T + A KVI E+ + I EIEIL +HP +VK
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGA 84
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIK 220
Y +G++ +++E+ GG+++ + + L++ + RQ+L L +LH ++I+HRD+K
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD-LNHGKYDGYAG 279
N+L+ ++++ADFGVS +T+ +S +GT +M+PE + + + YD Y
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKA 203
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCL 337
DIWSLG++++E P + + ++ I + PP P S EFRDF+ L
Sbjct: 204 DIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIAL 260
Query: 338 QKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
K+P +R AAQLL+HPF+ N+ LR+++
Sbjct: 261 DKNPETRPSAAQLLEHPFV---SSITSNKALRELV 292
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 140/255 (54%), Gaps = 12/255 (4%)
Query: 110 GSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMYDRN 169
G G V++ + TS + A KVI E+ + + EI+IL +HPN+VK D +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFYYE 79
Query: 170 GEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRDIKPSNL 224
+ +L+E+ GG+++ + E L++ + +Q L L YLH KI+HRD+K N+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 225 LINSSKNVKIADFGVSRILAQT-MDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWS 283
L ++K+ADFGVS +T + +S +GT +M+PE + + + + Y D+WS
Sbjct: 140 LFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 199
Query: 284 LGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--APEMASREFRDFISRCLQKDP 341
LG++++E P + + ++ I ++PP P S F+DF+ +CL+K+
Sbjct: 200 LGITLIEMAEIEPP---HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNV 256
Query: 342 HSRWPAAQLLQHPFI 356
+RW +QLLQHPF+
Sbjct: 257 DARWTTSQLLQHPFV 271
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 14/271 (5%)
Query: 96 INPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++P EL K +IG GS G V++ + T +V A+K+I + I +EI +L
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLH 210
+ P V K + Y ++ ++ +++EY+ GGS LE + + I + L R++L GL YLH
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL-REILKGLDYLH 121
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +HRDIK +N+L++ VK+ADFGV+ L T N+ VGT +M+PE I
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI----K 177
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
YD A DIWSLG++ +E G P + + ++F I PP S+ +
Sbjct: 178 QSAYDSKA-DIWSLGITAIELARGEPPHS---ELHPMKVLFLIPKNNPPTLEGNYSKPLK 233
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
+F+ CL K+P R A +LL+H FILR +
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 14/271 (5%)
Query: 96 INPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++P EL K +IG GS G V++ + T +V A+K+I + I +EI +L
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLH 210
+ P V K + Y ++ ++ +++EY+ GGS LE + + I + L R++L GL YLH
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL-REILKGLDYLH 141
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +HRDIK +N+L++ VK+ADFGV+ L T N+ VGT +M+PE I
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI----K 197
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
YD A DIWSLG++ +E G P + + ++F I PP S+ +
Sbjct: 198 QSAYDSKA-DIWSLGITAIELARGEPPHS---ELHPMKVLFLIPKNNPPTLEGNYSKPLK 253
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
+F+ CL K+P R A +LL+H FILR +
Sbjct: 254 EFVEACLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 14/271 (5%)
Query: 96 INPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++P EL K +IG GS G V++ + T +V A+K+I + I +EI +L
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLH 210
+ P V K + Y ++ ++ +++EY+ GGS LE + + I + L R++L GL YLH
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL-REILKGLDYLH 121
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +HRDIK +N+L++ VK+ADFGV+ L T N VGT +M+PE I
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI----K 177
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
YD A DIWSLG++ +E G P + + ++F I PP S+ +
Sbjct: 178 QSAYDSKA-DIWSLGITAIELARGEPPHS---ELHPMKVLFLIPKNNPPTLEGNYSKPLK 233
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
+F+ CL K+P R A +LL+H FILR +
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 97 NPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
+P EL K +IG GS G V++ + T +V A+K+I + I +EI +L +
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHK 211
P V K + Y ++ ++ +++EY+ GGS LE + + I + L R++L GL YLH
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL-REILKGLDYLHS 137
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
K +HRDIK +N+L++ VK+ADFGV+ L T N VGT +M+PE I
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI----KQ 193
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
YD A DIWSLG++ +E G P + + ++F I PP S+ ++
Sbjct: 194 SAYDSKA-DIWSLGITAIELARGEPPHS---ELHPMKVLFLIPKNNPPTLEGNYSKPLKE 249
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
F+ CL K+P R A +LL+H FILR +
Sbjct: 250 FVEACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 16/269 (5%)
Query: 96 INPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++P EL K +RIG GS G V++ + T V A+K+I + I +EI +L
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHK 211
+ P + + Y ++ ++ +++EY+ GGS L +E ++ + R++L GL YLH
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHS 134
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+ +HRDIK +N+L++ +VK+ADFGV+ L T N VGT +M+PE I
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI----KQ 190
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDW--ASLMFAICFAQPPEAPEMASREF 329
YD + DIWSLG++ +E G P D ++F I PP S+ F
Sbjct: 191 SAYD-FKADIWSLGITAIELAKGEPP-----NSDLHPMRVLFLIPKNSPPTLEGQHSKPF 244
Query: 330 RDFISRCLQKDPHSRWPAAQLLQHPFILR 358
++F+ CL KDP R A +LL+H FI R
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLKHKFITR 273
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 143/268 (53%), Gaps = 12/268 (4%)
Query: 95 LINPAEL-QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRD 153
+ +P EL K RIG GS G V++ + T +V A+K+I + I +EI +L
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLH 210
+ V K + Y + ++ +++EY+ GGS L A E ++ + +++L GL YLH
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLH 137
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +HRDIK +N+L++ +VK+ADFGV+ L T N+ VGT +M+PE I
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI----Q 193
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
YD A DIWSLG++ +E G P ++F I PP ++ F+
Sbjct: 194 QSAYDSKA-DIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFK 249
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
+FI CL KDP R A +LL+H FI++
Sbjct: 250 EFIDACLNKDPSFRPTAKELLKHKFIVK 277
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 141/271 (52%), Gaps = 14/271 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDV 154
+ +L+ +G G+ G V ++ H P+ ++ A+K I + ++ +++I +R V
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGG-------SLEGAHIRQEHILSDLARQVLSGLA 207
+ P V + R G++ + +E MD ++ E IL +A ++ L
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 208 YLH-KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
+LH K ++HRD+KPSN+LIN+ VK+ DFG+S L ++ A G YM+PERIN
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA-GCKPYMAPERIN 226
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAP-EMA 325
+LN Y DIWSLG++++E + RFP+ G + + P+ P +
Sbjct: 227 PELNQKGY-SVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF 283
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S EF DF S+CL+K+ R +L+QHPF
Sbjct: 284 SAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 143/279 (51%), Gaps = 23/279 (8%)
Query: 102 QKGNRI--GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPN 158
+ G+R+ G G+ G V+ A+K I DS SQ + EI + + + H N
Sbjct: 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKN 80
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLE-------GAHIRQEHILSDLARQVLSGLAYLHK 211
+V+ + NG I++ +E + GGSL G E + +Q+L GL YLH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 212 RKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSA-VGTIAYMSPERINTD- 268
+IVHRDIK N+LIN+ V KI+DFG S+ LA ++PC GT+ YM+PE I+
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 199
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-CFAQPPEAPEMASR 327
+GK A DIWSLG +I+E G+ PF G+ + MF + F PE PE S
Sbjct: 200 RGYGK----AADIWSLGCTIIEMATGKPPFY--ELGEPQAAMFKVGMFKVHPEIPESMSA 253
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQ 366
E + FI +C + DP R A LL F+ + + + Q
Sbjct: 254 EAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 139/269 (51%), Gaps = 23/269 (8%)
Query: 102 QKGNRI--GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPN 158
+ G+R+ G G+ G V+ A+K I DS SQ + EI + + + H N
Sbjct: 9 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKN 66
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLE-------GAHIRQEHILSDLARQVLSGLAYLHK 211
+V+ + NG I++ +E + GGSL G E + +Q+L GL YLH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 212 RKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSA-VGTIAYMSPERINTD- 268
+IVHRDIK N+LIN+ V KI+DFG S+ LA ++PC GT+ YM+PE I+
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 185
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-CFAQPPEAPEMASR 327
+GK A DIWSLG +I+E G+ PF G+ + MF + F PE PE S
Sbjct: 186 RGYGK----AADIWSLGCTIIEMATGKPPFY--ELGEPQAAMFKVGMFKVHPEIPESMSA 239
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
E + FI +C + DP R A LL F+
Sbjct: 240 EAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 140/271 (51%), Gaps = 14/271 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDV 154
+ +L+ +G G+ G V ++ H P+ ++ A+K I + ++ +++I +R V
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 63
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGG-------SLEGAHIRQEHILSDLARQVLSGLA 207
+ P V + R G++ + +E MD ++ E IL +A ++ L
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 208 YLH-KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
+LH K ++HRD+KPSN+LIN+ VK+ DFG+S L + A G YM+PERIN
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA-GCKPYMAPERIN 182
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAP-EMA 325
+LN Y DIWSLG++++E + RFP+ G + + P+ P +
Sbjct: 183 PELNQKGY-SVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF 239
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S EF DF S+CL+K+ R +L+QHPF
Sbjct: 240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 26/276 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPN 158
+L+ IG G+ G+V ++VH P+ ++ A+K I ++ + Q+ ++++ +R + P
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAH---------IRQEHILSDLARQVLSGLAYL 209
+V+ + R G+ + +E M S + + + E IL + + L +L
Sbjct: 83 IVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 210 HKR-KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
+ KI+HRDIKPSN+L++ S N+K+ DFG+S L ++ A G YM+PERI+
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA-GCRPYMAPERIDPS 200
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL---MFAICFAQPPEAPEMA 325
+ YD D+WSLG+++ E GRFP+ W S+ + + PP+
Sbjct: 201 ASRQGYD-VRSDVWSLGITLYELATGRFPYP-----KWNSVFDQLTQVVKGDPPQLSNSE 254
Query: 326 SREFR----DFISRCLQKDPHSRWPAAQLLQHPFIL 357
REF +F++ CL KD R +LL+HPFIL
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 33/298 (11%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
IN + + IGSG+ V P A+K I + ++ +EI+ + +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL---------EGAH---IRQEHILSDLARQVL 203
HPN+V + + E+ ++++ + GGS+ +G H + E ++ + R+VL
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-----NSAVGTIA 258
GL YLHK +HRD+K N+L+ +V+IADFGVS LA D + VGT
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF---------AVGRQGDWASL 309
+M+PE + YD + DIWS G++ +E G P+ + Q D SL
Sbjct: 192 WMAPEVMEQVRG---YD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQN 367
+ Q E + + FR IS CLQKDP R AA+LL+H F +A + Q
Sbjct: 248 ETGV---QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 33/290 (11%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
IN + + IGSG+ V P A+K I + ++ +EI+ + +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL---------EGAH---IRQEHILSDLARQVL 203
HPN+V + + E+ ++++ + GGS+ +G H + E ++ + R+VL
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-----NSAVGTIA 258
GL YLHK +HRD+K N+L+ +V+IADFGVS LA D + VGT
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF---------AVGRQGDWASL 309
+M+PE + YD + DIWS G++ +E G P+ + Q D SL
Sbjct: 187 WMAPEVMEQVRG---YD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRA 359
+ Q E + + FR IS CLQKDP R AA+LL+H F +A
Sbjct: 243 ETGV---QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 14/256 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG G+ GTV+ + T + A++ + + + I EI ++R+ +PN+V D
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDS 85
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIR---QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++EY+ GGSL E ++ + R+ L L +LH +++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
N+L+ +VK+ DFG + + VGT +M+PE + K G DIW
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-----KAYGPKVDIW 200
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFISRCLQKD 340
SLG+ +E G P+ + ++ I PE PE S FRDF++RCL+ D
Sbjct: 201 SLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 257
Query: 341 PHSRWPAAQLLQHPFI 356
R A +LLQH F+
Sbjct: 258 VEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 14/256 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG G+ GTV+ + T + A++ + + + I EI ++R+ +PN+V D
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDS 85
Query: 166 YDRNGEIEVLLEYMDGGSLEGA---HIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++EY+ GGSL E ++ + R+ L L +LH +++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
N+L+ +VK+ DFG + ++ VGT +M+PE + K G DIW
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-----KAYGPKVDIW 200
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFISRCLQKD 340
SLG+ +E G P+ + ++ I PE PE S FRDF++RCL D
Sbjct: 201 SLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD 257
Query: 341 PHSRWPAAQLLQHPFI 356
R A +LLQH F+
Sbjct: 258 VEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG G+ GTV+ + T + A++ + + + I EI ++R+ +PN+V D
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDS 85
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIR---QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++EY+ GGSL E ++ + R+ L L +LH +++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
N+L+ +VK+ DFG + + VGT +M+PE + K G DIW
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-----KAYGPKVDIW 200
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFISRCLQKD 340
SLG+ +E G P+ + ++ I PE PE S FRDF++RCL D
Sbjct: 201 SLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD 257
Query: 341 PHSRWPAAQLLQHPFI 356
R A +LLQH F+
Sbjct: 258 VEKRGSAKELLQHQFL 273
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 14/256 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG G+ GTV+ + T + A++ + + + I EI ++R+ +PN+V D
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDS 86
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIR---QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++EY+ GGSL E ++ + R+ L L +LH +++HRDIK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 146
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
N+L+ +VK+ DFG + + VGT +M+PE + K G DIW
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-----KAYGPKVDIW 201
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFISRCLQKD 340
SLG+ +E G P+ + ++ I PE PE S FRDF++RCL+ D
Sbjct: 202 SLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 341 PHSRWPAAQLLQHPFI 356
R A +L+QH F+
Sbjct: 259 VEKRGSAKELIQHQFL 274
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 41/296 (13%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRD 153
L++ QK +IG G+ G V++ + T V ALK I + E + V S REI +L++
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSG 205
+NHPN+VK D+ ++ ++ E+ MD +L G + ++ Q+L G
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQG 119
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
LA+ H +++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI- 178
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAIC 314
L KY A DIWSLG E R FP F + R G +++
Sbjct: 179 ---LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 315 FAQP---PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 144/277 (51%), Gaps = 17/277 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHP 157
+L+ +GSG+ G VW++ T V A+K + GN E++ R + ++ +L+ + P
Sbjct: 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV-VLKSHDCP 84
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYL-HK 211
+V+C + N ++ + +E M G E R E IL + ++ L YL K
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN-TDLN 270
++HRD+KPSN+L++ +K+ DFG+S L SA G AYM+PERI+ D
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA-GCAAYMAPERIDPPDPT 202
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA--SRE 328
YD A D+WSLG+S++E G+FP+ + D+ L + +PP P S +
Sbjct: 203 KPDYDIRA-DVWSLGISLVELATGQFPYKNCKT-DFEVLT-KVLQEEPPLLPGHMGFSGD 259
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVN 365
F+ F+ CL KD R +LL+H FI R +V+
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVD 296
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 14/256 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG G+ GTV+ + T + A++ + + + I EI ++R+ +PN+V D
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDS 86
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQ---EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++EY+ GGSL E ++ + R+ L L +LH +++HR+IK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSD 146
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
N+L+ +VK+ DFG + ++ VGT +M+PE + K G DIW
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-----KAYGPKVDIW 201
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFISRCLQKD 340
SLG+ +E G P+ + ++ I PE PE S FRDF++RCL+ D
Sbjct: 202 SLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD 258
Query: 341 PHSRWPAAQLLQHPFI 356
R A +L+QH F+
Sbjct: 259 VEKRGSAKELIQHQFL 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIY--GNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG GS G V+ S V A+K + G + I +E+ L+ + HPN ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIR----QEHILSDLARQVLSGLAYLHKRKIVHRDI 219
Y R +++EY G + + + QE ++ + L GLAYLH ++HRD+
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 180
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++ VK+ DFG + I+A P N VGT +M+PE I ++ G+YDG
Sbjct: 181 KAGNILLSEPGLVKLGDFGSASIMA----PANXFVGTPYWMAPEVI-LAMDEGQYDGKV- 234
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA----SREFRDFISR 335
D+WSLG++ +E + P + M A+ E+P + S FR+F+
Sbjct: 235 DVWSLGITCIELAERKPPLFN------MNAMSALYHIAQNESPALQSGHWSEYFRNFVDS 288
Query: 336 CLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
CLQK P R + LL+H F+LR V +L Q
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQ 323
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 128
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 184
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 178
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIY--GNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG GS G V+ S V A+K + G + I +E+ L+ + HPN ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIR----QEHILSDLARQVLSGLAYLHKRKIVHRDI 219
Y R +++EY G + + + QE ++ + L GLAYLH ++HRD+
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++ VK+ DFG + I+A P N VGT +M+PE I ++ G+YDG
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMA----PANXFVGTPYWMAPEVI-LAMDEGQYDGKV- 195
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA----SREFRDFISR 335
D+WSLG++ +E + P + M A+ E+P + S FR+F+
Sbjct: 196 DVWSLGITCIELAERKPPLFN------MNAMSALYHIAQNESPALQSGHWSEYFRNFVDS 249
Query: 336 CLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
CLQK P R + LL+H F+LR V +L Q
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQ 284
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 128
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 184
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E +MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 28/267 (10%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + R A+K++ + R + E+ I+RD H NVV+ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR-RELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ VL+E++ GG+L + +R E ++ + VL LAYLH + ++HRDIK
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I+ L + DIW
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV-----DIW 225
Query: 283 SLGVSILEFYLGRFPF-------AVGRQGDWASLMFAICFAQPPEA--PEMASREFRDFI 333
SLG+ ++E G P+ A+ R D + PP+ S RDF+
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRD----------SPPPKLKNSHKVSPVLRDFL 275
Query: 334 SRCLQKDPHSRWPAAQLLQHPFILRAG 360
R L +DP R A +LL HPF+L+ G
Sbjct: 276 ERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 179
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 125
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 181
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 179
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 178
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 179
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 178
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 178
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 178
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 160 VKCHDMYDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E +MD +L G + ++ Q+L GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 180
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 179
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKV--IYGNHEDSVRSQICREIEILRDVNH 156
A + +IG G V+R ALK I+ + R+ +EI++L+ +NH
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEG--AHIRQ------EHILSDLARQVLSGLAY 208
PNV+K + + + E+ ++LE D G L H ++ E + Q+ S L +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
+H R+++HRDIKP+N+ I ++ VK+ D G+ R + +S VGT YMSPERI
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI--- 208
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-----FAQPPEAPE 323
H + DIWSLG + E + PF GD +L +++C PP +
Sbjct: 209 --HENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKMNL-YSLCKKIEQCDYPPLPSD 261
Query: 324 MASREFRDFISRCLQKDPHSR 344
S E R ++ C+ DP R
Sbjct: 262 HYSEELRQLVNMCINPDPEKR 282
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V ALK I + E + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLSFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 137/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFAL-KVIYGNHEDSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V AL K+ + V S REI +L+++NHPN+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 137/290 (47%), Gaps = 41/290 (14%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFAL-KVIYGNHEDSVRSQICREIEILRDVNHPNV 159
QK +IG G+ G V++ + T V AL K+ + V S REI +L+++NHPN+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 160 VKCHDMYDRNGEIEVLLEY--------MDGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
VK D+ ++ ++ E+ MD +L G + ++ Q+L GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+++HRD+KP NLLIN+ +K+ADFG++R + V T+ Y +PE L
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI----LLG 176
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP--------FAVGRQ-GDWASLMFAICFAQP-- 318
KY A DIWSLG E R FP F + R G +++ + P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 319 -PEAPEMASREF-----------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P+ A ++F R +S+ L DP+ R A L HPF
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 25/271 (9%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNH 156
+ G +GSG V + T + +A K I S R +I RE+ ILR++ H
Sbjct: 8 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKR 212
PN++ HD+++ ++ ++LE + GG L +E + D A +Q+L G+ YLH +
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 213 KIVHRDIKPSNLLINSSKNV-----KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
+I H D+KP N+++ KNV K+ DFG++ + + + + GT +++PE +N
Sbjct: 128 RIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVN- 184
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 185 ------YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R AQ L+H +I
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 135/283 (47%), Gaps = 30/283 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEIL-RDVNHPNVVKCHDM 165
IG GS R +H T+ FA+K+I D + EIEIL R HPN++ D+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKII-----DKSKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVLSGLA----YLHKRKIVHRDIKP 221
YD + V+ E M GG L +RQ+ A VL + YLH + +VHRD+KP
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 222 SNLL-INSSKN---VKIADFGVSRIL----AQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
SN+L ++ S N ++I DFG ++ L M PC +A +++PE L
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA----NFVAPEV----LERQG 196
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC---FAQPPEAPEMASREFR 330
YD A DIWSLGV + G PFA G ++ I F+ S +
Sbjct: 197 YDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILP 373
D +S+ L DPH R AA +L+HP+I+ Q Q RQ P
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + + ++LEY G+ L+ E + ++ + L+Y H +K
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF D + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 150/271 (55%), Gaps = 33/271 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKV--IYGNHEDSVRSQICREIEILRDVNHP-NVVKCH 163
+G+G+ G V++ H T ++ A+KV + G+ E+ ++ +EI +L+ +H N+ +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK----QEINMLKKYSHHRNIATYY 87
Query: 164 DMYDR------NGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLH 210
+ + + ++ +++E+ GS+ +G +++E I + + R++L GL++LH
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI-AYICREILRGLSHLH 146
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
+ K++HRDIK N+L+ + VK+ DFGVS L +T+ N+ +GT +M+PE I D N
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA----S 326
+ D+WSLG++ +E G P D + + P AP + S
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEGAPPLC-----DMHPMRALFLIPRNP-APRLKSKKWS 260
Query: 327 REFRDFISRCLQKDPHSRWPAA-QLLQHPFI 356
++F+ FI CL K+ HS+ PA QL++HPFI
Sbjct: 261 KKFQSFIESCLVKN-HSQRPATEQLMKHPFI 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 25/271 (9%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNH 156
+ G +GSG V + T + +A K I S R +I RE+ ILR++ H
Sbjct: 15 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 74
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKR 212
PN++ HD+++ ++ ++LE + GG L +E + D A +Q+L G+ YLH +
Sbjct: 75 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 134
Query: 213 KIVHRDIKPSNLLINSSKNV-----KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
+I H D+KP N+++ KNV K+ DFG++ + + + + GT +++PE +N
Sbjct: 135 RIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVN- 191
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 192 ------YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R AQ L+H +I
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 25/271 (9%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNH 156
+ G +GSG V + T + +A K I S R +I RE+ ILR++ H
Sbjct: 29 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRH 88
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKR 212
PN++ HD+++ ++ ++LE + GG L +E + D A +Q+L G+ YLH +
Sbjct: 89 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 148
Query: 213 KIVHRDIKPSNLLINSSKNV-----KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
+I H D+KP N+++ KNV K+ DFG++ + + + + GT +++PE +N
Sbjct: 149 RIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIFGTPEFVAPEIVN- 205
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 206 ------YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 259
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R AQ L+H +I
Sbjct: 260 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G GS G V + T + +A+KVI + ++ S I RE+E+L+ ++HPN++K ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + ++ E GG L I++ EH + + +QV SG+ Y+HK IVHRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 222 SNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
N+L+ S + ++KI DFG+S Q +GT Y++PE + G YD
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVL-----RGTYDEKC 203
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D+WS GV + G PF + D + +A S + +D I + L
Sbjct: 204 -DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 339 KDPHSRWPAAQLLQHPFI 356
P R A Q L+HP+I
Sbjct: 263 FHPSLRITATQCLEHPWI 280
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDV 154
+ +L+ +G G+ G V + H P+ ++ A+K I + ++ +++I R V
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV 90
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGG-------SLEGAHIRQEHILSDLARQVLSGLA 207
+ P V + R G++ + E D ++ E IL +A ++ L
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 150
Query: 208 YLH-KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
+LH K ++HRD+KPSN+LIN+ VK DFG+S L + A G Y +PERIN
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA-GCKPYXAPERIN 209
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAP-EMA 325
+LN Y DIWSLG++ +E + RFP+ G + + P+ P +
Sbjct: 210 PELNQKGY-SVKSDIWSLGITXIELAILRFPY--DSWGTPFQQLKQVVEEPSPQLPADKF 266
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S EF DF S+CL+K+ R +L QHPF
Sbjct: 267 SAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 185
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 186 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 236
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 184
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 185 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 235
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 184
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 185 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 235
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHD 189
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 190 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 240
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 213 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 263
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHD 210
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 211 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 261
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 17/261 (6%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEILRDVNHPNVVKCHD 164
+IG GS G V R + +K I + S R + RE+ +L ++ HPN+V+ +
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 165 MYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
++ NG + ++++Y +GG L +G +++ IL D Q+ L ++H RKI+HR
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQIL-DWFVQICLALKHVHDRKILHR 149
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
DIK N+ + V++ DFG++R+L T++ + +GT Y+SPE + K
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK---- 205
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
DIW+LG + E + F G +L+ I P S + R +S+
Sbjct: 206 -SDIWALGCVLYELCTLKHAFEA---GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLF 261
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
+++P R +L+ FI +
Sbjct: 262 KRNPRDRPSVNSILEKGFIAK 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + ++ GT+ Y+ PE I ++ K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 188 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 238
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 15/265 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G GS G V + T + +A+KVI + ++ S I RE+E+L+ ++HPN++K ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + ++ E GG L I++ EH + + +QV SG+ Y+HK IVHRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 222 SNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
N+L+ S + ++KI DFG+S Q +GT Y++PE + G YD
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVL-----RGTYDE-K 202
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D+WS GV + G PF + D + +A S + +D I + L
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 339 KDPHSRWPAAQLLQHPFILRAGQSQ 363
P R A Q L+HP+I + +
Sbjct: 263 FHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I G+
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIE-----GR 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEIL-RDVNHPNVVKCHDM 165
IG GS R VH T+ +A+KVI D + EIEIL R HPN++ D+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVI-----DKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVLSGLA----YLHKRKIVHRDIKP 221
YD + ++ E M GG L +RQ+ A VL + YLH + +VHRD+KP
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKP 149
Query: 222 SNLL-INSSKN---VKIADFGVSRIL----AQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
SN+L ++ S N ++I DFG ++ L M PC +A +++PE + K
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA----NFVAPEVL-------K 198
Query: 274 YDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC---FAQPPEAPEMASRE 328
GY DIWSLG+ + G PFA G ++ I F S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFILRAG---QSQVNQNLRQIL 372
+D +S+ L DPH R A Q+LQHP++ + QSQ++ Q++
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLV 305
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 13 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 191 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 241
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 242 SRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 11/223 (4%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILSDLA 199
Q+ +EI IL+ ++HPNVVK ++ D E + ++ E ++ G + + + D A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQA 139
Query: 200 R----QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVG 255
R ++ G+ YLH +KI+HRDIKPSNLL+ ++KIADFGVS + ++ VG
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 256 TIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF 315
T A+M+PE ++ + G A D+W++GV++ F G+ PF R S + +
Sbjct: 200 TPAFMAPESLSE--TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 316 AQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILR 358
+ P+ P++A + +D I+R L K+P SR ++ HP++ R
Sbjct: 258 -EFPDQPDIA-EDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G GS G V + T + +A+KVI + ++ S I RE+E+L+ ++HPN++K ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + ++ E GG L I++ EH + + +QV SG+ Y+HK IVHRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 222 SNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
N+L+ S + ++KI DFG+S Q +GT Y++PE + G YD
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVL-----RGTYDE-K 202
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D+WS GV + G PF + D + +A S + +D I + L
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Query: 339 KDPHSRWPAAQLLQHPFI 356
P R A Q L+HP+I
Sbjct: 263 FHPSLRITATQCLEHPWI 280
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEIL-RDVNHPNVVKCHDM 165
IG GS R VH T+ +A+KVI D + EIEIL R HPN++ D+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVI-----DKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVLSGLA----YLHKRKIVHRDIKP 221
YD + ++ E M GG L +RQ+ A VL + YLH + +VHRD+KP
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKP 149
Query: 222 SNLL-INSSKN---VKIADFGVSRIL----AQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
SN+L ++ S N ++I DFG ++ L M PC +A +++PE + K
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA----NFVAPEVL-------K 198
Query: 274 YDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC---FAQPPEAPEMASRE 328
GY DIWSLG+ + G PFA G ++ I F S
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFILRAG---QSQVNQNLRQIL 372
+D +S+ L DPH R A Q+LQHP++ + QSQ++ Q++
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLV 305
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 190 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 240
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 186 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 236
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 237 SRLLKHNPSQRPMLREVLEHPWI 259
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 204 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 254
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 192 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 190 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 240
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFG--VSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++HRDIKP NLL+ S+ +KIADFG V ++ D C GT+ Y+ PE I ++
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHD 187
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WSLGV EF +G+ PF + + + F P E A RD
Sbjct: 188 EKV-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RD 238
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
ISR L+ +P R ++L+HP+I
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 24/267 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHD- 164
IG+GS G ++ ++ K + YG+ ++ + + E+ +LR++ HPN+V+ +D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 165 MYDR-NGEIEVLLEYMDGGSL-----EGAHIRQ---EHILSDLARQVLSGLAYLHKRK-- 213
+ DR N + +++EY +GG L +G RQ E + + Q+ L H+R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 ---IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
++HRD+KP+N+ ++ +NVK+ DFG++RIL D VGT YMSPE++N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+ K DIWSLG + E PF Q + A + F + P S E
Sbjct: 194 NEK-----SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYSDELN 245
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFIL 357
+ I+R L + R ++L++P IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G L+ E + ++ + L+Y H ++
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 192 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT A+++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPAFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + S GT+ Y+ PE I ++ K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--GTLDYLPPEMIEGRMHDEK 187
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 188 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 238
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + ALKV++ + V Q+ RE+EI + HP
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 184 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 234
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 235 SRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA--ALCGTLDYLPPEMIEGRMHDEK 189
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 190 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 240
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 30/297 (10%)
Query: 97 NPAELQKGNRIGSGSGGTVW---RVVHPPTSRVFALKVIYGNH---EDSVRSQICREIEI 150
+P+ + +G GS G V+ +V P + ++A+KV+ D VR+++ R+I
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI-- 83
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
L DVNHP VVK H + G++ ++L+++ GG L + +E + LA L G
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL-G 142
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
L +LH I++RD+KP N+L++ ++K+ DFG+S+ S GT+ YM+PE +
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
N + ++ D WS GV + E G PF QG + P+
Sbjct: 203 NRQGH-----SHSADWWSYGVLMFEMLTGSLPF----QGKDRKETMTLILKAKLGMPQFL 253
Query: 326 SREFRDFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
S E + + +++P +R A ++ +H F +++ + R+I PP +P
Sbjct: 254 STEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYR--REIKPPFKP 308
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 189 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 239
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 187 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 237
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHE-DSVRSQICREIEILRDVN-HP 157
+G G V R +H PT + +A+K+I + E +R +E++ILR V+ HP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKR 212
N+++ D Y+ N ++ + M G L ++ ++ LS+ + R +L + LHK
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGEL-FDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDL 269
IVHRD+KP N+L++ N+K+ DFG S +DP S GT +Y++PE I +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 270 --NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASR 327
NH Y G D+WS GV + G PF +Q ++ + + + S
Sbjct: 200 NDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D +SR L P R+ A + L HPF
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 190 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 240
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHD- 164
IG+GS G ++ ++ K + YG+ ++ + + E+ +LR++ HPN+V+ +D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 165 MYDR-NGEIEVLLEYMDGGSL-----EGAHIRQ---EHILSDLARQVLSGLAYLHKRK-- 213
+ DR N + +++EY +GG L +G RQ E + + Q+ L H+R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 ---IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
++HRD+KP+N+ ++ +NVK+ DFG++RIL + VGT YMSPE++N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+ K DIWSLG + E PF Q + A + F + P S E
Sbjct: 194 NEK-----SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYSDELN 245
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFIL 357
+ I+R L + R ++L++P IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIA+FG S + + GT+ Y+ PE I ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 190 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 240
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G L+ E + ++ + L+Y H ++
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIADFG S + GT+ Y+ PE I ++ K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 192 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 24/267 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVNHPNVVKCHD- 164
IG+GS G ++ ++ K + YG+ ++ + + E+ +LR++ HPN+V+ +D
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 165 MYDR-NGEIEVLLEYMDGGSL-----EGAHIRQ---EHILSDLARQVLSGLAYLHKRK-- 213
+ DR N + +++EY +GG L +G RQ E + + Q+ L H+R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 214 ---IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
++HRD+KP+N+ ++ +NVK+ DFG++RIL + VGT YMSPE++N
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+ K DIWSLG + E PF Q + A + F + P S E
Sbjct: 194 NEK-----SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IPYRYSDELN 245
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFIL 357
+ I+R L + R ++L++P IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLIL 272
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + V Q+ RE+EI + HP
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ + + + ++LEY G+ L+ E + ++ + L+Y H ++
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ S+ +KIA+FG S + + GT+ Y+ PE I ++ K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WSLGV EF +G+ PF + + + F P E A RD I
Sbjct: 189 V-----DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLI 239
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
SR L+ +P R ++L+HP+I
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 17/259 (6%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHPNVVK 161
G +G G G V+ + + ALKV++ + V Q+ RE+EI + HPN+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 162 CHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + ++LEY G+ L+ E + ++ + L+Y H ++++HR
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
DIKP NLL+ S+ +KIADFG S + ++ GT+ Y+ PE I ++ K
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV--- 191
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
D+WSLGV EF +G PF + + + F P E A RD ISR L
Sbjct: 192 --DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA----RDLISRLL 245
Query: 338 QKDPHSRWPAAQLLQHPFI 356
+ + R A++L+HP+I
Sbjct: 246 KHNASQRLTLAEVLEHPWI 264
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-------DSVRSQICREIEILRDV-NHPN 158
IG G V R VH T FA+K++ E + VR RE ILR V HP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRK 213
++ D Y+ + + ++ + M G L ++ ++ LS+ + R +L +++LH
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGEL-FDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPE--RINTDLNH 271
IVHRD+KP N+L++ + ++++DFG S L + + GT Y++PE + + D H
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHL-EPGEKLRELCGTPGYLAPEILKCSMDETH 279
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
Y G D+W+ GV + G PF RQ ++ + + S +D
Sbjct: 280 PGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILR 358
ISR LQ DP +R A Q LQHPF R
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 131/279 (46%), Gaps = 22/279 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEIL-RDVNHPNVVKCHDM 165
IG GS R +H T+ FA+K+I D + EIEIL R HPN++ D+
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKII-----DKSKRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVL----SGLAYLHKRKIVHRDIKP 221
YD + V+ E GG L +RQ+ A VL + YLH + +VHRD+KP
Sbjct: 85 YDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 222 SNLL-INSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
SN+L ++ S N ++I DFG ++ L + T +++PE L YD
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEV----LERQGYDA- 199
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC---FAQPPEAPEMASREFRDFIS 334
A DIWSLGV + G PFA G ++ I F+ S +D +S
Sbjct: 200 ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS 259
Query: 335 RCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILP 373
+ L DPH R AA +L+HP+I+ Q Q RQ P
Sbjct: 260 KXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH-EDSVRSQICREIEILRDVNHPNVV 160
Q+ ++GSG+ G V T A+K+I S S++ E+ +L+ ++HPN++
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVH 216
K +D ++ +++E GG L I + E + + +QVLSG+ YLHK IVH
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 217 RDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
RD+KP NLL+ S + +KI DFG+S + + +GT Y++PE + K
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERLGTAYYIAPEVLRK-----K 213
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRD 331
YD D+WS+GV + G PF G Q D L ++PE S +D
Sbjct: 214 YDEKC-DVWSIGVILFILLAGYPPF--GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
I + LQ D R A Q L+HP+I
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHPNVVK 161
G +G G G V+ + + ALKV++ + V Q+ RE+EI + HPN+++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 162 CHDMYDRNGEIEVLLEYMDGGS----LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + ++LEY G+ L+ E + ++ + L+Y H ++++HR
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
DIKP NLL+ S+ +KIADFG S + + GT+ Y+ PE I ++ K
Sbjct: 137 DIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV--- 191
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
D+WSLGV EF +G PF + + + F P E A RD ISR L
Sbjct: 192 --DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA----RDLISRLL 245
Query: 338 QKDPHSRWPAAQLLQHPFI 356
+ + R A++L+HP+I
Sbjct: 246 KHNASQRLTLAEVLEHPWI 264
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICRE-----IEILRDVNHPN 158
G +GSG V + T +A K I + R +CRE + ILR V HPN
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
++ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + A+ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 31/272 (11%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
V+ H++Y+ ++ ++LE + GG L E + +E ++ +Q+L+G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA-TEFLKQILNGVYYLHSLQ 134
Query: 214 IVHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERIN 266
I H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 267 TDLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM 324
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 -------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 325 ASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHE-DSVRSQICREIEILRDVN-HP 157
+G G V R +H PT + +A+K+I + E +R +E++ILR V+ HP
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKR 212
N+++ D Y+ N ++ + M G L ++ ++ LS+ + R +L + LHK
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGEL-FDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDL 269
IVHRD+KP N+L++ N+K+ DFG S +DP GT +Y++PE I +
Sbjct: 131 NIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 270 --NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASR 327
NH Y G D+WS GV + G PF +Q ++ + + + S
Sbjct: 187 NDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D +SR L P R+ A + L HPF
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHE-DSVRSQICREIEILRDVN-HP 157
+G G V R +H PT + +A+K+I + E +R +E++ILR V+ HP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKR 212
N+++ D Y+ N ++ + M G L ++ ++ LS+ + R +L + LHK
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGEL-FDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDL 269
IVHRD+KP N+L++ N+K+ DFG S +DP GT +Y++PE I +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 270 --NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASR 327
NH Y G D+WS GV + G PF +Q ++ + + + S
Sbjct: 200 NDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D +SR L P R+ A + L HPF
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 190 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 134
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 190 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 216
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 277 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 331
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 332 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 389 PAQRATAAELLKHPFLAKAG 408
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVK 161
G +G G G V+ + ALKV++ + ++ V Q+ REIEI + HPN+++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHR 217
++ + I ++LE+ G L H R E + ++ L Y H+RK++HR
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 139
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
DIKP NLL+ +KIADFG S + A ++ GT+ Y+ PE I GK
Sbjct: 140 DIKPENLLMGYKGELKIADFGWS-VHAPSLRR-RXMCGTLDYLPPEMIE-----GKTHDE 192
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
D+W GV EF +G PF + + + PP S +D IS+ L
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLL 248
Query: 338 QKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPP 374
+ P R P +++HP+ V N R++LPP
Sbjct: 249 RYHPPQRLPLKGVMEHPW--------VKANSRRVLPP 277
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 139
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 200 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 254
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 255 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 312 PAQRATAAELLKHPFLAKAG 331
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 94
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 155 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 209
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 210 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 267 PAQRATAAELLKHPFLAKAG 286
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVK 161
G +G G G V+ + ALKV++ + ++ V Q+ REIEI + HPN+++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHR 217
++ + I ++LE+ G L H R E + ++ L Y H+RK++HR
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
DIKP NLL+ +KIADFG S + A ++ GT+ Y+ PE I GK
Sbjct: 139 DIKPENLLMGYKGELKIADFGWS-VHAPSLRR-RXMCGTLDYLPPEMIE-----GKTHDE 191
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
D+W GV EF +G PF + + + PP S +D IS+ L
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLL 247
Query: 338 QKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPP 374
+ P R P +++HP+ V N R++LPP
Sbjct: 248 RYHPPQRLPLKGVMEHPW--------VKANSRRVLPP 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 130/271 (47%), Gaps = 15/271 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ V T ++FA+K I S I EI +LR + H N+V D+Y
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
+ + ++++ + GG L + + E S L RQVL + YLH+ IVHRD+KP
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 149
Query: 223 NLLINS---SKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL S + I+DFG+S++ + D ++A GT Y++PE + K A
Sbjct: 150 NLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTACGTPGYVAPEVLAQ-----KPYSKAV 203
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQK 339
D WS+GV G PF + + + S +DFI ++K
Sbjct: 204 DCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEK 263
Query: 340 DPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
DP+ R+ Q +HP+I AG + +N+N+ +
Sbjct: 264 DPNKRYTCEQAARHPWI--AGDTALNKNIHE 292
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 96
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 157 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 211
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 212 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 269 PAQRATAAELLKHPFLAKAG 288
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + + A +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++LE + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ G V RV T FA K + HE S + + +EI+ + + HP +V HD +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSGLAYLHKRKIVHRDIKP 221
+ + E+ ++ E+M GG L + + +S + RQV GL ++H+ VH D+KP
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 222 SNLLINS--SKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDLNHGKYDG 276
N++ + S +K+ DFG L +DP S GT + +PE + GK G
Sbjct: 178 ENIMFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPE-----VAEGKPVG 228
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-FAQPPEAPEMASREFRDFISR 335
Y D+WS+GV G PF G D C + A S + +DFI +
Sbjct: 229 YYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 336 CLQKDPHSRWPAAQLLQHPFI 356
L DP++R Q L+HP++
Sbjct: 288 LLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 22/262 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+G+G+ G V RV T FA K + HE S + + +EI+ + + HP +V HD
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSGLAYLHKRKIVHRDIK 220
++ + E+ ++ E+M GG L + + +S + RQV GL ++H+ VH D+K
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282
Query: 221 PSNLLINS--SKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDLNHGKYD 275
P N++ + S +K+ DFG L +DP S GT + +PE + GK
Sbjct: 283 PENIMFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPE-----VAEGKPV 333
Query: 276 GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-FAQPPEAPEMASREFRDFIS 334
GY D+WS+GV G PF G D C + A S + +DFI
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 392
Query: 335 RCLQKDPHSRWPAAQLLQHPFI 356
+ L DP++R Q L+HP++
Sbjct: 393 KLLLADPNTRMTIHQALEHPWL 414
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 85
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIRQ-EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 146 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 200
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 201 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 258 PAQRATAAELLKHPFLAKAG 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V + ++ A+K + + R + E+ I+RD H NVV+ ++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNS 89
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+ LH + ++HRDIK
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ VK++DFG +++ + VGT +M+PE I + L +G DIW
Sbjct: 150 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP----EVDIW 204
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I PP + S + F+ R L +D
Sbjct: 205 SLGIMVIEMVDGEPPYF---NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R AA+LL+HPF+ +AG
Sbjct: 262 PAQRATAAELLKHPFLAKAG 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++GSG+ G V V + +K I + QI EIE+L+ ++HPN++K ++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 166 YDRNGEIEVLLEYMDGGSL----EGAHIR----QEHILSDLARQVLSGLAYLHKRKIVHR 217
++ + +++E +GG L A R E +++L +Q+++ LAY H + +VH+
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 218 DIKPSNLLINSS---KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
D+KP N+L + +KI DFG++ + N+A GT YM+PE D+
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA-GTALYMAPEVFKRDVT---- 203
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFA------VGRQGDWASLMFAI-CFAQPPEAPEMASR 327
+ DIWS GV + G PF V ++ + +A+ C P+A
Sbjct: 204 --FKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV----- 256
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFILRA 359
D + + L KDP R AAQ+L H + +A
Sbjct: 257 ---DLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G G V+ + ALKV++ + ++ V Q+ REIEI + HPN+++ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 165 MYDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIK 220
+ I ++LE+ G L H R E + ++ L Y H+RK++HRDIK
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL+ +KIADFG S + A ++ GT+ Y+ PE I GK D
Sbjct: 142 PENLLMGYKGELKIADFGWS-VHAPSLRR-RXMCGTLDYLPPEMIE-----GKTHDEKVD 194
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+W GV EF +G PF + + + PP S +D IS+ L+
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYH 250
Query: 341 PHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPP 374
P R P +++HP+ V N R++LPP
Sbjct: 251 PPQRLPLKGVMEHPW--------VKANSRRVLPP 276
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 25/281 (8%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G G G V+ + + ALKV++ + ++ V Q+ REIEI ++HP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
N+++ ++ + I ++LEY G L + + E + + ++ L Y H +K
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
++HRDIKP NLL+ +KIADFG S + A ++ + GT+ Y+ PE I +++ K
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRR-KTMCGTLDYLPPEMIEGRMHNEK 201
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+W +GV E +G PF + + + P P A +D I
Sbjct: 202 V-----DLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA----QDLI 252
Query: 334 SRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPP 374
S+ L+ +P R P AQ+ HP+ V N R++LPP
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPW--------VRANSRRVLPP 285
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G GS G V H T + ALK I + + ++ REI L+ + HP+++K +D
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ +I +++EY GG L + ++ + D R Q++ + Y H+ KIVHRD+K
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLK 135
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL++ + NVKIADFG+S I+ + ++ G+ Y +PE IN L Y G D
Sbjct: 136 PENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKL----YAGPEVD 190
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS G+ + +GR PF ++ +F + P+ S + I R + D
Sbjct: 191 VWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVAD 246
Query: 341 PHSRWPAAQLLQHPFI 356
P R ++ + P+
Sbjct: 247 PMQRITIQEIRRDPWF 262
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G +G L+FA + PE + R
Sbjct: 209 --KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 14/260 (5%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
+IG GS G V T + A+K + + R + E+ I+RD +H NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 166 YDRNGEIEVLLEYMDGGSLEG--AHIRQ-EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
Y E+ V++E+++GG+L H R E ++ + VL L+YLH + ++HRDIK
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 223 NLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIW 282
++L+ S +K++DFG +++ + VGT +M+PE I+ L +G DIW
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISR-LPYGT----EVDIW 225
Query: 283 SLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEM--ASREFRDFISRCLQKD 340
SLG+ ++E G P+ M I + PP ++ S R F+ L ++
Sbjct: 226 SLGIMVIEMIDGEPPYF---NEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
Query: 341 PHSRWPAAQLLQHPFILRAG 360
P R A +LL HPF+ AG
Sbjct: 283 PSQRATAQELLGHPFLKLAG 302
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G +G L+FA + PE + R
Sbjct: 209 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 40/292 (13%)
Query: 103 KGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
K +++G G+ TV++ T + ALK I HE+ RE+ +L+D+ H N+V
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 163 HDMYDRNGEIEVLLEYMDGGSLE----GAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
HD+ + ++ EY+D + +I H + Q+L GLAY H++K++HRD
Sbjct: 66 HDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRD 125
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
+KP NLLIN +K+ADFG++R + ++ V T+ Y P D+ G D Y+
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP-----DILLGSTD-YS 179
Query: 279 G--DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE---MASREFR--- 330
D+W +G E GR F + +F I P E +++ EF+
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI-LGTPTEETWPGILSNEEFKTYN 238
Query: 331 ---------------------DFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
D +++ LQ + +R A ++HPF L G+
Sbjct: 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 103 KGNRI-GSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNV 159
KG R+ G GS G V T + A+KVI + + + + RE+++L+ ++HPN+
Sbjct: 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
+K ++ ++ G ++ E GG L I ++ + + RQVLSG+ Y+HK KIV
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 148
Query: 216 HRDIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S N++I DFG+S + +GT Y++PE + HG
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVL-----HG 202
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
YD D+WS GV + G PF + D + + + S +D
Sbjct: 203 TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
I + L P R A L H +I + Q++ ++
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 103 KGNRI-GSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNV 159
KG R+ G GS G V T + A+KVI + + + + RE+++L+ ++HPN+
Sbjct: 53 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
+K ++ ++ G ++ E GG L I ++ + + RQVLSG+ Y+HK KIV
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 216 HRDIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S N++I DFG+S + +GT Y++PE + HG
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVL-----HG 226
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
YD D+WS GV + G PF + D + + + S +D
Sbjct: 227 TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 285
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
I + L P R A L H +I + Q++ ++
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 321
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 103 KGNRI-GSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNV 159
KG R+ G GS G V T + A+KVI + + + + RE+++L+ ++HPN+
Sbjct: 52 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
+K ++ ++ G ++ E GG L I ++ + + RQVLSG+ Y+HK KIV
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 216 HRDIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S N++I DFG+S + +GT Y++PE + HG
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVL-----HG 225
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
YD D+WS GV + G PF + D + + + S +D
Sbjct: 226 TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 284
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
I + L P R A L H +I + Q++ ++
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 320
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I S R I RE+ IL+++ HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL----SDLARQVLSGLAYLHKRKI 214
V+ H++Y+ ++ ++ E + GG L +E + ++ +Q+L+G+ YLH +I
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 215 VHRDIKPSNLLI---NSSK-NVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINT 267
H D+KP N+++ N K +KI DFG LA +D N + GT +++PE +N
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 268 DLNHGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
Y+ G D+WS+GV G PF + + + + A+ + E
Sbjct: 191 ------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S +DFI R L KDP R LQHP+I
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ V T ++ A+K I + + EI +L + HPN+V D+Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
+ G + ++++ + GG L + + E S L QVL + YLH IVHRD+KP
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 223 NLL---INSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKYDG 276
NLL ++ + I+DFG+S++ DP ++A GT Y++PE + K
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ-----KPYS 196
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D WS+GV G PF + + + S +DFI
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 337 LQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
++KDP R+ Q LQHP+I AG + +++N+ Q
Sbjct: 257 MEKDPEKRFTCEQALQHPWI--AGDTALDKNIHQ 288
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ V T ++ A+K I + + EI +L + HPN+V D+Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
+ G + ++++ + GG L + + E S L QVL + YLH IVHRD+KP
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 223 NLL---INSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKYDG 276
NLL ++ + I+DFG+S++ DP ++A GT Y++PE + K
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ-----KPYS 196
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D WS+GV G PF + + + S +DFI
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 337 LQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
++KDP R+ Q LQHP+I AG + +++N+ Q
Sbjct: 257 MEKDPEKRFTCEQALQHPWI--AGDTALDKNIHQ 288
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ V T ++ A+K I + + EI +L + HPN+V D+Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
+ G + ++++ + GG L + + E S L QVL + YLH IVHRD+KP
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 223 NLL---INSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKYDG 276
NLL ++ + I+DFG+S++ DP ++A GT Y++PE + K
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ-----KPYS 196
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D WS+GV G PF + + + S +DFI
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 337 LQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
++KDP R+ Q LQHP+I AG + +++N+ Q
Sbjct: 257 MEKDPEKRFTCEQALQHPWI--AGDTALDKNIHQ 288
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G+G+ V T ++ A+K I + + EI +L + HPN+V D+Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDIKPS 222
+ G + ++++ + GG L + + E S L QVL + YLH IVHRD+KP
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPE 145
Query: 223 NLL---INSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKYDG 276
NLL ++ + I+DFG+S++ DP ++A GT Y++PE + K
Sbjct: 146 NLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ-----KPYS 196
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D WS+GV G PF + + + S +DFI
Sbjct: 197 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
Query: 337 LQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
++KDP R+ Q LQHP+I AG + +++N+ Q
Sbjct: 257 MEKDPEKRFTCEQALQHPWI--AGDTALDKNIHQ 288
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 129/271 (47%), Gaps = 17/271 (6%)
Query: 103 KGNRI-GSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNV 159
KG R+ G GS G V T + A+KVI + + + + RE+++L+ ++HPN+
Sbjct: 35 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 94
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
+K ++ ++ G ++ E GG L I ++ + + RQVLSG+ Y+HK KIV
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 154
Query: 216 HRDIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S N++I DFG+S + +GT Y++PE + HG
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVL-----HG 208
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
YD D+WS GV + G PF + D + + + S +D
Sbjct: 209 TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 267
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQ 363
I + L P R A L H +I + Q
Sbjct: 268 IRKMLTYVPSMRISARDALDHEWIQTYTKEQ 298
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 45/302 (14%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC-REIEILRDVNHPNVV 160
+K +IG GS G V++ + T ++ A+K + +D V +I REI +L+ + HPN+V
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVH 216
+++ R + ++ EY D L Q EH++ + Q L + + HK +H
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP N+LI +K+ DFG +R+L D + V T Y SPE + D +G
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP--- 182
Query: 277 YAGDIWSLGVSILE----------------FYLGRFPFA--VGRQGDWASLMFAICFAQP 318
D+W++G E YL R + R S +
Sbjct: 183 -PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 319 PEAPEMASREFR---------DFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLR 369
P+ +M E + + CL DP R QLL HP+ +N+R
Sbjct: 242 PDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF---------ENIR 292
Query: 370 QI 371
+I
Sbjct: 293 EI 294
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 138/276 (50%), Gaps = 21/276 (7%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCH 163
+ +G G+ V+R T + +ALKV+ + +V +I R EI +L ++HPN++K
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVL----KKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHRDI 219
++++ EI ++LE + GG L + + E +D +Q+L +AYLH+ IVHRD+
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 220 KPSNLLINS---SKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
KP NLL + +KIADFG+S+I+ + + GT Y +PE + G G
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEIL-----RGCAYG 228
Query: 277 YAGDIWSLGVSILEFYLGRFPF--AVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
D+WS+G+ G PF G Q + ++ + P E+ S +D +
Sbjct: 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV-SLNAKDLVR 287
Query: 335 RCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQ 370
+ + DP R Q LQHP++ + V+ + Q
Sbjct: 288 KLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQ 323
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I + R +I RE+ ILR V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + A+ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I + R +I RE+ ILR V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + A+ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 29/292 (9%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVN 155
P + + G +G GS TV TSR +A+K++ H +++ + RE +++ ++
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 67
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLH 210
HP VK + + + ++ L Y G L +IR+ E +++S L YLH
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTD 268
+ I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 185
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
K + D+W+LG I + G PF G + L+F + PE +
Sbjct: 186 ----KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPK 237
Query: 329 FRDFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
RD + + L D R + L HPF +S +NL Q PP
Sbjct: 238 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 285
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 29/292 (9%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVN 155
P + + G +G GS TV TSR +A+K++ H +++ + RE +++ ++
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 68
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLH 210
HP VK + + + ++ L Y G L +IR+ E +++S L YLH
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTD 268
+ I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 186
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
K + D+W+LG I + G PF G + L+F + PE +
Sbjct: 187 ----KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPK 238
Query: 329 FRDFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
RD + + L D R + L HPF +S +NL Q PP
Sbjct: 239 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 286
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 29/292 (9%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVN 155
P + + G +G GS TV TSR +A+K++ H +++ + RE +++ ++
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 66
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLH 210
HP VK + + + ++ L Y G L +IR+ E +++S L YLH
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTD 268
+ I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 184
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
K + D+W+LG I + G PF G + L+F + PE +
Sbjct: 185 ----KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPK 236
Query: 329 FRDFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
RD + + L D R + L HPF +S +NL Q PP
Sbjct: 237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 284
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 29/292 (9%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVN 155
P + + G +G GS TV TSR +A+K++ H +++ + RE +++ ++
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 65
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLH 210
HP VK + + + ++ L Y G L +IR+ E +++S L YLH
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTD 268
+ I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 183
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
K + D+W+LG I + G PF G + L+F + PE +
Sbjct: 184 ----KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPK 235
Query: 329 FRDFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
RD + + L D R + L HPF +S +NL Q PP
Sbjct: 236 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 283
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ NS VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 209 --KSASKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 103 KGNRI-GSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNV 159
KG R+ G GS G V T + A+KVI + + + + RE+++L+ ++HPN+
Sbjct: 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
K ++ ++ G ++ E GG L I ++ + + RQVLSG+ Y HK KIV
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 216 HRDIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S N++I DFG+S + +GT Y++PE + HG
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKIGTAYYIAPEVL-----HG 202
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
YD D+WS GV + G PF + D + + + S +D
Sbjct: 203 TYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
I + L P R A L H +I + Q++ ++
Sbjct: 262 IRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDV 297
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 74
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 75 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + + GT Y++PE + D ++G+ A
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGR----A 188
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF D L F + + P S E + ++ L+
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFY---NQDHERL-FELILMEEIRFPRTLSPEAKSLLAGLLK 244
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 245 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + + GT Y++PE + D ++G+ A
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGR----A 185
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF D L F + + P S E + ++ L+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFY---NQDHERL-FELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 283
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + + GT Y++PE + D ++G+ A
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGR----A 185
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF D L F + + P S E + ++ L+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFY---NQDHERL-FELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 283
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC-REIEILRDVNHPNVVKCHDM 165
+G GS G V + + T R+ A+K + +D + +I REI++L+ + H N+V ++
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHI----RQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ ++ E++D L+ + ++ Q+++G+ + H I+HRDIKP
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
N+L++ S VK+ DFG +R LA + + V T Y +PE + D+ +GK A D+
Sbjct: 153 ENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK----AVDV 208
Query: 282 WSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-----------FAQPP-----EAPEMA 325
W++G + E ++G P G +C F + P PE+
Sbjct: 209 WAIGCLVTEMFMGE-PLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 326 SRE------------FRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQ 363
RE D +CL DP R A+LL H F G ++
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAE 317
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ NS VGT Y+SPE +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--- 209
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 210 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 263
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 309
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ ++ ++G+G+ TV++ ++ T ALK + + E+ S REI +++++ H N
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 159 VVKCHDMYDRNGEIEVLLEYMD------------GGSLEGAHIRQEHILSDLARQVLSGL 206
+V+ +D+ ++ ++ E+MD G + G + +++ Q+L GL
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLEL---NLVKYFQWQLLQGL 121
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
A+ H+ KI+HRD+KP NLLIN +K+ DFG++R ++ +S V T+ Y +P+ +
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-----------CF 315
+ + DIWS G + E G+ F + L+F I
Sbjct: 182 GSRTYST----SIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 316 AQPPEAPEMASR-------------------EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
P P + R DF+ LQ +P R A Q L HP+
Sbjct: 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 29/278 (10%)
Query: 98 PAELQKGN---------RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREI 148
P E+++G+ +GSG+ G V R V T RVF K I + + + EI
Sbjct: 41 PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYTVKNEI 99
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVL 203
I+ ++HP ++ HD ++ E+ ++LE++ GG L +++ +S+ RQ
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC 159
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSK--NVKIADFGVSRILAQTMDP---CNSAVGTIA 258
GL ++H+ IVH DIKP N++ + K +VKI DFG LA ++P T
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG----LATKLNPDEIVKVTTATAE 215
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP 318
+ +PE ++ + G+ D+W++GV G PFA + + +
Sbjct: 216 FAAPEIVDREPV-----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 319 PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A S E +DFI LQK+P R L+HP++
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + GT Y++PE + D ++G+ A
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGR----A 185
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF +F + + P S E + ++ L+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 283
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + GT Y++PE + D ++G+ A
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGR----A 185
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF +F + + P S E + ++ L+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 283
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 76
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 135
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + GT Y++PE + D ++G+ A
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGR----A 190
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF +F + + P S E + ++ L+
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEEIRFPRTLSPEAKSLLAGLLK 246
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 247 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 288
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ NS VGT Y+SPE +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--- 205
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 206 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 259
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 305
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I + R +I RE+ ILR V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + ++ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G G+ G V V T R +A+K++ +D V + E +L++ HP +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV-AHTVTESRVLQNTRHPFLTALK 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + + ++EY +GG L H+ +E + ++ +++S L YLH R +V+RD
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
IK NL+++ ++KI DFG+ + GT Y++PE + D ++G+ A
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE-DNDYGR----A 185
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W LGV + E GR PF +F + + P S E + ++ L+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDH----ERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 339 KDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
KDP R A ++++H F L V Q +++LPP +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ--KKLLPPFKP 283
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 18/272 (6%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHP 157
+ + GN +G GS V+R T A+K+I ++ + ++ E++I + HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLSGLAYLHK 211
++++ ++ ++ + + ++LE G + +++ E+ Q+++G+ YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I+HRD+ SNLL+ + N+KIADFG++ L + + GT Y+SPE I T H
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSAH 189
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
G D+WSLG +GR PF D E P S E +D
Sbjct: 190 ----GLESDVWSLGCMFYTLLIGRPPF----DTDTVKNTLNKVVLADYEMPSFLSIEAKD 241
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQ 363
I + L+++P R + +L HPF+ R ++
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I + R +I RE+ ILR V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + ++ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 23/268 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-----SQICREIEILRDVNHPN 158
G +GSG V + T +A K I + R +I RE+ ILR V H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
V+ HD+Y+ ++ ++LE + GG L ++E + + A +Q+L G+ YLH +KI
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 215 VHRDIKPSNLLINSSK----NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
H D+KP N+++ ++K+ DFG++ + ++ N GT +++PE +N
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVN---- 191
Query: 271 HGKYD--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
Y+ G D+WS+GV G PF + + + + ++ + E S
Sbjct: 192 ---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+DFI + L K+ R + L+HP+I
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI----YGNHEDSVRSQICREIEILRDVNHPNVVKC 162
IG G+ V R ++ T + FA+K++ + + + RE I + HP++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 163 HDMYDRNGEIEVLLEYMDGGSL--------EGAHIRQEHILSDLARQVLSGLAYLHKRKI 214
+ Y +G + ++ E+MDG L + + E + S RQ+L L Y H I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 215 VHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+HRD+KP N+L+ S +N VK+ DFGV+ L ++ VGT +M+PE + + +
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-PY 210
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
GK D+W GV + G PF ++ + ++ + P S +D
Sbjct: 211 GK----PVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK-YKMNPRQWSHISESAKD 265
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
+ R L DP R + L HP++
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N+ VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE--- 206
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 207 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 260
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 306
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G GS G V H T + ALK+I + ++ +I REI LR + HP+++K +D
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ EI +++EY G L ++++ + AR Q++S + Y H+ KIVHRD+K
Sbjct: 72 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL++ NVKIADFG+S I+ + ++ G+ Y +PE I+ L Y G D
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKL----YAGPEVD 185
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS GV + R PF + ++F P+ S I R L +
Sbjct: 186 VWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 341 PHSRWPAAQLLQ 352
P +R +++Q
Sbjct: 242 PLNRISIHEIMQ 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 209 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 209
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 210 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 263
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 309
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 206
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 207 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 260
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 306
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G GS G V H T + ALK+I + ++ +I REI LR + HP+++K +D
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ EI +++EY G L ++++ + AR Q++S + Y H+ KIVHRD+K
Sbjct: 81 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 139
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL++ NVKIADFG+S I+ + ++ G+ Y +PE I+ L Y G D
Sbjct: 140 PENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKL----YAGPEVD 194
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS GV + R PF + ++F P+ S I R L +
Sbjct: 195 VWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 341 PHSRWPAAQLLQ 352
P +R +++Q
Sbjct: 251 PLNRISIHEIMQ 262
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 209 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 208
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 209 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 262
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 206
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 207 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 260
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 306
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G GS G V H T + ALK+I + ++ +I REI LR + HP+++K +D
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ EI +++EY G L ++++ + AR Q++S + Y H+ KIVHRD+K
Sbjct: 76 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 134
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL++ NVKIADFG+S I+ + ++ G+ Y +PE I+ L Y G D
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKL----YAGPEVD 189
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS GV + R PF + ++F P+ S I R L +
Sbjct: 190 VWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 341 PHSRWPAAQLLQ 352
P +R +++Q
Sbjct: 246 PLNRISIHEIMQ 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 190
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 191 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 244
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 245 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 290
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G GS G V H T + ALK+I + ++ +I REI LR + HP+++K +D
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ EI +++EY G L ++++ + AR Q++S + Y H+ KIVHRD+K
Sbjct: 82 VIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLL++ NVKIADFG+S I+ + ++ G+ Y +PE I+ L Y G D
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKL----YAGPEVD 195
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS GV + R PF + ++F P+ S I R L +
Sbjct: 196 VWSCGVILYVMLCRRLPF----DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 341 PHSRWPAAQLLQ 352
P +R +++Q
Sbjct: 252 PLNRISIHEIMQ 263
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 213
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 214 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 267
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 268 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 313
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 30/297 (10%)
Query: 97 NPAELQKGNRIGSGSGGTVWRVVHPPTS---RVFALKVIYGNH---EDSVRSQICREIEI 150
+P++ + +G GS G V+ V S +++A+KV+ D VR+++ R+I
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI-- 80
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
L +VNHP +VK H + G++ ++L+++ GG L + +E + LA L+
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA- 139
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
L +LH I++RD+KP N+L++ ++K+ DFG+S+ S GT+ YM+PE +
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
N H + + D WS GV + E G PF QG + P+
Sbjct: 200 NRR-GHTQ----SADWWSFGVLMFEMLTGTLPF----QGKDRKETMTMILKAKLGMPQFL 250
Query: 326 SREFRDFISRCLQKDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRP 377
S E + + +++P +R A ++ +H F +++ + R+I PP +P
Sbjct: 251 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR--REIHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 30/297 (10%)
Query: 97 NPAELQKGNRIGSGSGGTVWRVVHPPTS---RVFALKVIYGNH---EDSVRSQICREIEI 150
+P++ + +G GS G V+ V S +++A+KV+ D VR+++ R+I
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI-- 79
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
L +VNHP +VK H + G++ ++L+++ GG L + +E + LA L+
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA- 138
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
L +LH I++RD+KP N+L++ ++K+ DFG+S+ S GT+ YM+PE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
N H + + D WS GV + E G PF QG + P+
Sbjct: 199 NRR-GHTQ----SADWWSFGVLMFEMLTGTLPF----QGKDRKETMTMILKAKLGMPQFL 249
Query: 326 SREFRDFISRCLQKDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRP 377
S E + + +++P +R A ++ +H F +++ + R+I PP +P
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR--REIHPPFKP 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%), Gaps = 30/299 (10%)
Query: 97 NPAELQKGNRIGSGSGGTVWRVVHPPTS---RVFALKVIYGNH---EDSVRSQICREIEI 150
+P++ + +G GS G V+ V S +++A+KV+ D VR+++ R+I
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI-- 79
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
L +VNHP +VK H + G++ ++L+++ GG L + +E + LA L+
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA- 138
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
L +LH I++RD+KP N+L++ ++K+ DFG+S+ S GT+ YM+PE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
N H + + D WS GV + E G PF QG + P+
Sbjct: 199 NRR-GHTQ----SADWWSFGVLMFEMLTGTLPF----QGKDRKETMTMILKAKLGMPQFL 249
Query: 326 SREFRDFISRCLQKDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRPLS 379
S E + + +++P +R A ++ +H F +++ + R+I PP +P +
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR--REIHPPFKPAT 306
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 205
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 206 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 259
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 305
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
+ K +G G G V + T A K+I + ++ EI ++ ++H N++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHANLI 149
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIV 215
+ +D ++ +I +++EY+DGG L I + + L++L +Q+ G+ ++H+ I+
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209
Query: 216 HRDIKPSNLLI--NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
H D+KP N+L +K +KI DFG++R + + GT +++PE +N D
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLAR-RYKPREKLKVNFGTPEFLAPEVVNYD----- 263
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
+ + D+WS+GV G PF + + + A + E + S E ++FI
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 323
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
S+ L K+ R A++ L+HP++
Sbjct: 324 SKLLIKEKSWRISASEALKHPWL 346
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 15/258 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+G V H T + A+K++ N S +I EIE L+++ H ++ + + +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLAYLHKRKIVHRDIKPS 222
+ +I ++LEY GG L I Q+ + + + RQ++S +AY+H + HRD+KP
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPE 137
Query: 223 NLLINSSKNVKIADFGVSRILAQTMD-PCNSAVGTIAYMSPERINTDLNHGK-YDGYAGD 280
NLL + +K+ DFG+ D + G++AY +PE I GK Y G D
Sbjct: 138 NLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ-----GKSYLGSEAD 192
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G+ + G PF D ++ + P+ S + + LQ D
Sbjct: 193 VWSMGILLYVLMCGFLPF----DDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVD 248
Query: 341 PHSRWPAAQLLQHPFILR 358
P R LL HP+I++
Sbjct: 249 PKKRISMKNLLNHPWIMQ 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS T TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 206
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + PE + R
Sbjct: 207 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPEKFFPKAR 260
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 306
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T R A+K+I + Q + RE+ I++ +NHPN+VK ++
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H+++IVHRD+K
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 139
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S ++ G+ Y +PE KYDG D+
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFT-VGGKLDTFCGSPPYAAPELFQGK----KYDGPEVDV 194
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 195 WSLGVILYTLVSGSLPF 211
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 107 IGSGSGGTVW---RVVHPPTSRVFALKV-----IYGNHEDSVRSQICREIEILRDVNHPN 158
+G G G V+ +V T ++FA+KV I N +D+ ++ R I L +V HP
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHPF 82
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
+V + G++ ++LEY+ GG L R+ + D A ++ L +LH++ I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
++RD+KP N+++N +VK+ DFG+ + ++ GTI YM+PE I H +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE-ILMRSGHNR- 200
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
A D WSLG + + G PF + + PP ++E RD +
Sbjct: 201 ---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLK 253
Query: 335 RCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRPL 378
+ L+++ SR A ++ HPF ++ R++ PP +PL
Sbjct: 254 KLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA--RKVEPPFKPL 300
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDV-NHPNVVKCH 163
IG GS V V T R++A+KV+ ++D + E + NHP +V H
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++EY++GG L RQ + + AR ++ L YLH+R I++RD+
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 147
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++S ++K+ D+G+ + + D + GT Y++PE + G+ G++
Sbjct: 148 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL-----RGEDYGFSV 202
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGD-----WASLMFAICFAQPPEAPEMASREFRDFIS 334
D W+LGV + E GR PF + D +F + + P S + +
Sbjct: 203 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLK 262
Query: 335 RCLQKDPHSRWPA------AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
L KDP R A + HPF + Q +Q++PP +P
Sbjct: 263 SFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQ--KQVVPPFKP 309
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHP 157
+ + G +G GS TV TSR +A+K++ H +++ + RE +++ ++HP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKR 212
VK + + + ++ L Y G L +IR+ E +++S L YLH +
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+KP N+L+N +++I DFG +++L+ N VGT Y+SPE +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE--- 211
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K + D+W+LG I + G PF G + L+F + P + R
Sbjct: 212 --KSACKSSDLWALGCIIYQLVAGLPPFRAGNE----YLIFQKIIKLEYDFPAAFFPKAR 265
Query: 331 DFISRCLQKDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPP 374
D + + L D R + L HPF +S +NL Q PP
Sbjct: 266 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF----ESVTWENLHQQTPP 311
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDV-NHPNVVKCH 163
IG GS V V T R++A+KV+ ++D + E + NHP +V H
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++EY++GG L RQ + + AR ++ L YLH+R I++RD+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++S ++K+ D+G+ + + D + GT Y++PE + G+ G++
Sbjct: 137 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL-----RGEDYGFSV 191
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGD-----WASLMFAICFAQPPEAPEMASREFRDFIS 334
D W+LGV + E GR PF + D +F + + P S + +
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK 251
Query: 335 RCLQKDPHSRWPA------AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
L KDP R A + HPF + Q +Q++PP +P
Sbjct: 252 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ--KQVVPPFKP 298
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDV-NHPNVVKCH 163
IG GS V V T R++A+KV+ ++D + E + NHP +V H
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++EY++GG L RQ + + AR ++ L YLH+R I++RD+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 132
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++S ++K+ D+G+ + + D + GT Y++PE + G+ G++
Sbjct: 133 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL-----RGEDYGFSV 187
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGD-----WASLMFAICFAQPPEAPEMASREFRDFIS 334
D W+LGV + E GR PF + D +F + + P S + +
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK 247
Query: 335 RCLQKDPHSRWPA------AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
L KDP R A + HPF + Q +Q++PP +P
Sbjct: 248 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ--KQVVPPFKP 294
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T R A+K+I + Q + RE+ I++ +NHPN+VK ++
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H+++IVHRD+K
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA 142
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S ++ G Y +PE KYDG D+
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFT-VGGKLDAFCGAPPYAAPELFQGK----KYDGPEVDV 197
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 198 WSLGVILYTLVSGSLPF 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+K+I E + EIEIL+ +NHP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L + + + + Q+L + YLH+ I+
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 194
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 195 GYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+K+I E + EIEIL+ +NHP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L + + + + Q+L + YLH+ I+
Sbjct: 84 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 142
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 200
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 201 GYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 259
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 260 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 296
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 25/289 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN--HEDSVRSQICREIEILRDV-NHPNVVKCH 163
IG GS V V T R++A++V+ ++D + E + NHP +V H
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++EY++GG L RQ + + AR ++ L YLH+R I++RD+
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 179
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
K N+L++S ++K+ D+G+ + + D ++ GT Y++PE + G+ G++
Sbjct: 180 KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL-----RGEDYGFSV 234
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGD-----WASLMFAICFAQPPEAPEMASREFRDFIS 334
D W+LGV + E GR PF + D +F + + P S + +
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLK 294
Query: 335 RCLQKDPHSRWPA------AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
L KDP R A + HPF + Q +Q++PP +P
Sbjct: 295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ--KQVVPPFKP 341
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+K+I E + EIEIL+ +NHP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L + + + + Q+L + YLH+ I+
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 194
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 195 GYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+K+I E + EIEIL+ +NHP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L + + + + Q+L + YLH+ I+
Sbjct: 78 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 194
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 195 GYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+K+I E + EIEIL+ +NHP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L + + + + Q+L + YLH+ I+
Sbjct: 77 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 135
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 193
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 194 GYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 252
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 253 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 289
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 107 IGSGSGGTVW---RVVHPPTSRVFALKV-----IYGNHEDSVRSQICREIEILRDVNHPN 158
+G G G V+ +V T ++FA+KV I N +D+ ++ R I L +V HP
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LEEVKHPF 82
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLA----RQVLSGLAYLHKRKI 214
+V + G++ ++LEY+ GG L R+ + D A ++ L +LH++ I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
++RD+KP N+++N +VK+ DFG+ + + GTI YM+PE I H +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE-ILMRSGHNR- 200
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
A D WSLG + + G PF + + PP ++E RD +
Sbjct: 201 ---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLK 253
Query: 335 RCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRPL 378
+ L+++ SR A ++ HPF ++ R++ PP +PL
Sbjct: 254 KLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA--RKVEPPFKPL 300
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ--ICREIEILRDVNHPNV 159
Q+ ++GSG+ G V T A+K+I + + + + E+ +L+ ++HPN+
Sbjct: 24 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIV 215
+K ++ ++ +++E GG L + +RQ+ D A +QVLSG YLHK IV
Sbjct: 84 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 143
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S +KI DFG+S + +GT Y++PE +
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEVLRK----- 197
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL--MFAICFAQPPEAPEMASREFR 330
KYD D+WS GV + G PF G Q D L + F+ P S E +
Sbjct: 198 KYDEKC-DVWSCGVILYILLCGYPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
+ L +P R A + L HP+I++
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+K+I +S Q + RE+ I++ +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + ++ G+ Y +PE KYDG D+
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 21/260 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCHDM 165
+GSG+ V+ V T ++FALK I + R S + EI +L+ + H N+V D+
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 166 YDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDI 219
Y+ ++++ + GG L G + ++ L + +QVLS + YLH+ IVHRD+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAVKYLHENGIVHRDL 132
Query: 220 KPSNLLI---NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
KP NLL + + I DFG+S++ + ++A GT Y++PE L Y
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGYVAPEV----LAQKPYSK 186
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D WS+GV G PF + + + + S +DFI
Sbjct: 187 -AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Query: 337 LQKDPHSRWPAAQLLQHPFI 356
L+KDP+ R+ + L HP+I
Sbjct: 246 LEKDPNERYTCEKALSHPWI 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 12/203 (5%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNV 159
LQK IG G+ V H T R A+K+I + Q + RE+ I++ +NHPN+
Sbjct: 19 LQK--TIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIV 215
VK ++ + + +++EY GG + AH R +E RQ++S + Y H++ IV
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIV 136
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
HRD+K NLL++ N+KIADFG S + ++ G+ Y +PE KYD
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDTFCGSPPYAAPELFQGK----KYD 191
Query: 276 GYAGDIWSLGVSILEFYLGRFPF 298
G D+WSLGV + G PF
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+K+I +S Q + RE+ I++ +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + ++ G+ Y +PE KYDG D+
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 103 KGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN-HPNVVK 161
K +G GS + VH +++ FA+K+I E + + +EI L+ HPN+VK
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ----KEITALKLCEGHPNIVK 70
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIVHR 217
H+++ +++E ++GG L +++H S + R+++S ++++H +VHR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 218 DIKPSNLLI---NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
D+KP NLL N + +KI DFG +R+ P + T+ Y +PE LN Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL----LNQNGY 186
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-------FAQPPEAPEMASR 327
D + D+WSLGV + G+ PF + + I F+ EA + S+
Sbjct: 187 DE-SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQ 245
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVN 365
E +D I L DP+ R + L + ++ Q N
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ--ICREIEILRDVNHPNV 159
Q+ ++GSG+ G V T A+K+I + + + + E+ +L+ ++HPN+
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIV 215
+K ++ ++ +++E GG L + +RQ+ D A +QVLSG YLHK IV
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 126
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S +KI DFG+S + +GT Y++PE +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEVLRK----- 180
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL--MFAICFAQPPEAPEMASREFR 330
KYD D+WS GV + G PF G Q D L + F+ P S E +
Sbjct: 181 KYDEKC-DVWSCGVILYILLCGYPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
+ L +P R A + L HP+I++
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+K+I +S Q + RE+ I++ +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + ++ G Y +PE KYDG D+
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 47/292 (16%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVV 160
+K +IG G+ GTV++ + T + ALK + + +D V S REI +L+++ H N+V
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 161 KCHDMYDRNGEIEVLLEYMD----------GGSLEGAHIRQEHILSDLARQVLSGLAYLH 210
+ HD+ + ++ ++ E+ D G L+ I+ Q+L GL + H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQLLKGLGFCH 118
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
R ++HRD+KP NLLIN + +K+ADFG++R + ++ V T+ Y P+ L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV----LF 174
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD-----------------WASLMFAI 313
K + D+WS G E P G D W S+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 314 CFAQPPEAPEMAS---------REFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P P S RD + L+ +P R A + LQHP+
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 26/270 (9%)
Query: 107 IGSGSGGTVW---RVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNH-PNV 159
+G+G+ G V+ ++ T +++A+KV+ + E ++L + P +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKRKI 214
V H + ++ ++L+Y++GG L H+ Q EH + +++ L +LHK I
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGEL-FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAVGTIAYMSPERI-NTDLNHG 272
++RDIK N+L++S+ +V + DFG+S+ +A + GTI YM+P+ + D H
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAV-GRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K A D WSLGV + E G PF V G + A + I ++PP EM++ +D
Sbjct: 241 K----AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALA-KD 295
Query: 332 FISRCLQKDPHSRW-----PAAQLLQHPFI 356
I R L KDP R A ++ +H F
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 99 AELQKGN-----RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILR 152
A+L GN IG G+ V H T + A+K+I +S Q + RE+ I++
Sbjct: 2 ADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 61
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAY 208
+NHPN+VK ++ + + +++EY GG + + + AR Q++S + Y
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
H++ IVHRD+K NLL+++ N+KIADFG S + ++ G+ Y +PE
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGK 180
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPF 298
KYDG D+WSLGV + G PF
Sbjct: 181 ----KYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVVKCHD 164
+IG G+ G V++ FALK I ED + S REI IL+++ H N+VK +D
Sbjct: 9 KIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + ++ E++D + + + + S A+ Q+L+G+AY H R+++HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLLIN +KIADFG++R + V T+ Y +P+ + + KY D
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL---MGSKKYSTTI-D 183
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-----------CFAQPPEAPEMASRE- 328
IWS+G E G F + D +F I P P E
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 329 -----FR--------DFISRCLQKDPHSRWPAAQLLQHPFI 356
F D +S+ L+ DP+ R A Q L+H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVV 160
QK ++G G+ G V++ R+ ALK I + ED + S REI +L++++HPN+V
Sbjct: 24 QKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVH 216
D+ + ++ E+M+ E Q+ + Q+L G+A+ H+ +I+H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP NLLINS +K+ADFG++R + V T+ Y +P+ + + KY
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL---MGSKKYST 199
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-------FAQPPEAPEMASREF 329
+ DIWS+G E G+ F D +F+I + Q E P R F
Sbjct: 200 -SVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 330 R-------------------DFISRCLQKDPHSRWPAAQLLQHPFI 356
+ D +S L DP+ R A + HP+
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVV 160
QK ++G G+ G V++ R+ ALK I + ED + S REI +L++++HPN+V
Sbjct: 24 QKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVH 216
D+ + ++ E+M+ E Q+ + Q+L G+A+ H+ +I+H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP NLLINS +K+ADFG++R + V T+ Y +P+ + + KY
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL---MGSKKYST 199
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC-------FAQPPEAPEMASREF 329
+ DIWS+G E G+ F D +F+I + Q E P R F
Sbjct: 200 -SVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 330 R-------------------DFISRCLQKDPHSRWPAAQLLQHPFI 356
+ D +S L DP+ R A + HP+
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+++I +S Q + RE+ I++ +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + ++ G+ Y +PE KYDG D+
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVVKCHD 164
+IG G+ G V++ FALK I ED + S REI IL+++ H N+VK +D
Sbjct: 9 KIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + ++ E++D + + + + S A+ Q+L+G+AY H R+++HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLLIN +KIADFG++R + V T+ Y +P+ + + KY D
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL---MGSKKYSTTI-D 183
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-----------CFAQPPEAPEMASRE- 328
IWS+G E G F + D +F I P P E
Sbjct: 184 IWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 329 -----FR--------DFISRCLQKDPHSRWPAAQLLQHPFI 356
F D +S+ L+ DP+ R A Q L+H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+++I E + EIEIL+ +NHP +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L G +E Q+L + YLH+ I+
Sbjct: 217 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 275
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 333
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 334 GYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 392
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 393 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 429
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 19/277 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIY-------GNHEDSVRSQICREIEILRDVNHPNV 159
+GSG+ G V T + A+++I E + EIEIL+ +NHP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
+K + +D + ++LE M+GG L G +E Q+L + YLH+ I+
Sbjct: 203 IKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 261
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP N+L++S + +KI DFG S+IL +T + GT Y++PE + +
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPE-VLVSVGTA 319
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRD 331
Y+ A D WSLGV + G PF+ R Q + + + PE S + D
Sbjct: 320 GYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 378
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNL 368
+ + L DP +R+ + L+HP++ + Q+L
Sbjct: 379 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDL 415
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVVKCHD 164
+IG G+ G V++ FALK I ED + S REI IL+++ H N+VK +D
Sbjct: 9 KIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + ++ E++D + + + + S A+ Q+L+G+AY H R+++HRD+K
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
P NLLIN +KIADFG++R + + T+ Y +P+ + + KY D
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL---MGSKKYSTTI-D 183
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-----------CFAQPPEAPEMASRE- 328
IWS+G E G F + D +F I P P E
Sbjct: 184 IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP 243
Query: 329 -----FR--------DFISRCLQKDPHSRWPAAQLLQHPFI 356
F D +S+ L+ DP+ R A Q L+H +
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+++I +S Q + RE+ I++ +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + +++EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + + G+ Y +PE KYDG D+
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFG-NKLDEFCGSPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 15/268 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHP 157
E Q +G G+ V R + PT + +A K+I + S R ++ RE I R + HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHP 63
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
N+V+ HD G ++ + + GG L + +E+ S +Q+L + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 214 IVHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
IVHRD+KP NLL+ S VK+ADFG++ + GT Y+SPE + D
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD-P 182
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+GK D+W+ GV + +G PF Q + A + P + + E +
Sbjct: 183 YGK----PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
D I++ L +P R A++ L+HP+I +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 27/286 (9%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR------------SQICREIEILRD 153
++GSG+ G V A+KVI + D R +I EI +L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLE----GAHIRQEHILSDLARQVLSGLAYL 209
++HPN++K D+++ ++ E+ +GG L H E +++ +Q+LSG+ YL
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYL 162
Query: 210 HKRKIVHRDIKPSNLLI---NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
HK IVHRDIKP N+L+ NS N+KI DFG+S ++ +GT Y++PE +
Sbjct: 163 HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK 221
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS 326
N D+WS GV + G PF D + + + S
Sbjct: 222 KKYNE------KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
E ++ I L D + R A + L +I + + +N++ ++ L
Sbjct: 276 DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA-NNINKSDQKTL 320
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 18/286 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
IG G+ G V V H + +V+A+K++ + + S + E +I+ N P VV+
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 165 MYDRNGEIEVLLEYMDGG---SLEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + + +++EYM GG +L + E +V+ L +H ++HRD+KP
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKP 202
Query: 222 SNLLINSSKNVKIADFGVSRILAQT-MDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N+L++ ++K+ADFG + +T M C++AVGT Y+SPE + + G Y G D
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYY-GRECD 261
Query: 281 IWSLGVSILEFYLGRFPF-AVGRQGDWASLM---FAICFAQPPEAPEMASREFRDFISRC 336
WS+GV + E +G PF A G ++ +M ++CF + E + A F++
Sbjct: 262 WWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTD- 320
Query: 337 LQKDPHSRWPAAQLLQHPFILRAGQSQVN-QNLRQILPPPRP-LSS 380
++ R ++ QHPF Q N N+R+ P P LSS
Sbjct: 321 -REVRLGRNGVEEIKQHPFF---KNDQWNWDNIRETAAPVVPELSS 362
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS-----QICREIEILRDVNHPN 158
G+ +G G+ G V H T A+K++ + +RS +I REI+ L+ HP+
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL---NRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHILSD-LARQVLSGLAYLHKRKI 214
++K + + + +++EY+ GG L H R E + + L +Q+LS + Y H+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
VHRD+KP N+L+++ N KIADFG+S +++ + ++ G+ Y +PE I+ L Y
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRL----Y 187
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
G DIWS GV + G PF + +F PE +R +
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPF----DDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 335 RCLQKDPHSRWPAAQLLQHPFI 356
LQ DP R + +H +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWF 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 15/268 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHP 157
E Q +G G+ V R + PT + +A K+I + S R ++ RE I R + HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHP 63
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
N+V+ HD G ++ + + GG L + +E+ S +Q+L + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 214 IVHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
IVHRD+KP NLL+ S VK+ADFG++ + GT Y+SPE + D
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD-P 182
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+GK D+W+ GV + +G PF Q + A + P + + E +
Sbjct: 183 YGK----PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
D I++ L +P R A++ L+HP+I +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 21/265 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI----YGNHEDSVRSQICREIEILRDVNHPNVVKC 162
IG G V R ++ T + FA+K++ + + + RE I + HP++V+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 163 HDMYDRNGEIEVLLEYMDGGSL--------EGAHIRQEHILSDLARQVLSGLAYLHKRKI 214
+ Y +G + ++ E+MDG L + + E + S RQ+L L Y H I
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 215 VHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+HRD+KP +L+ S +N VK+ FGV+ L ++ VGT +M+PE + + +
Sbjct: 154 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-PY 212
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
GK D+W GV + G PF ++ + ++ + P S +D
Sbjct: 213 GK----PVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK-YKMNPRQWSHISESAKD 267
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
+ R L DP R + L HP++
Sbjct: 268 LVRRMLMLDPAERITVYEALNHPWL 292
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS--VRSQICREIEILRDVNHPNVVK 161
G+ +G G+ G V H T A+K++ S V +I REI+ L+ HP+++K
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKIVHR 217
+ + +I +++EY+ GG L + E L +Q+LSG+ Y H+ +VHR
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
D+KP N+L+++ N KIADFG+S +++ + + G+ Y +PE I+ L Y G
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRXSCGSPNYAAPEVISGRL----YAGP 195
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
DIWS GV + G PF D +F P+ + + L
Sbjct: 196 EVDIWSSGVILYALLCGTLPF----DDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHML 251
Query: 338 QKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPRPLSS 380
Q DP R + +H + Q+L + L P P S
Sbjct: 252 QVDPMKRATIKDIREHEWF--------KQDLPKYLFPEDPSYS 286
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 47/292 (16%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVV 160
+K +IG G+ GTV++ + T + ALK + + +D V S REI +L+++ H N+V
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 161 KCHDMYDRNGEIEVLLEYMD----------GGSLEGAHIRQEHILSDLARQVLSGLAYLH 210
+ HD+ + ++ ++ E+ D G L+ I+ Q+L GL + H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQLLKGLGFCH 118
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
R ++HRD+KP NLLIN + +K+A+FG++R + ++ V T+ Y P+ L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV----LF 174
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD-----------------WASLMFAI 313
K + D+WS G E P G D W S+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 314 CFAQPPEAPEMAS---------REFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P P S RD + L+ +P R A + LQHP+
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 21/262 (8%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS-----QICREIEILRDVNHPN 158
G+ +G G+ G V H T A+K++ + +RS +I REI+ L+ HP+
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKIL---NRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHILSD-LARQVLSGLAYLHKRKI 214
++K + + + +++EY+ GG L H R E + + L +Q+LS + Y H+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
VHRD+KP N+L+++ N KIADFG+S +++ + + G+ Y +PE I+ L Y
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRDSCGSPNYAAPEVISGRL----Y 187
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
G DIWS GV + G PF + +F PE +R +
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPF----DDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 335 RCLQKDPHSRWPAAQLLQHPFI 356
LQ DP R + +H +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWF 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 41/285 (14%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
+ P++L G +G G G +V H T V +K + E++ R+ + +E++++R +
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-KEVKVMRCL 64
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG--AHIRQEHILS---DLARQVLSGLAYL 209
HPNV+K + ++ + + EY+ GG+L G + ++ S A+ + SG+AYL
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL 124
Query: 210 HKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCN-------------SAVG 255
H I+HRD+ N L+ +KNV +ADFG++R++ + P + VG
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 256 TIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRF---PFAVGRQGDWA----S 308
+M+PE IN G+ D++S G+ + E +GR P + R D+
Sbjct: 185 NPYWMAPEMIN-----GRSYDEKVDVFSFGIVLCEI-IGRVNADPDYLPRTMDFGLNVRG 238
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ C PP P F RC DP R P+ L+H
Sbjct: 239 FLDRYC---PPNCPP----SFFPITVRCCDLDPEKR-PSFVKLEH 275
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 21/265 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI----YGNHEDSVRSQICREIEILRDVNHPNVVKC 162
IG G V R ++ T + FA+K++ + + + RE I + HP++V+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 163 HDMYDRNGEIEVLLEYMDGGSL--------EGAHIRQEHILSDLARQVLSGLAYLHKRKI 214
+ Y +G + ++ E+MDG L + + E + S RQ+L L Y H I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 215 VHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+HRD+KP +L+ S +N VK+ FGV+ L ++ VGT +M+PE + + +
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE-PY 210
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
GK D+W GV + G PF ++ + ++ + P S +D
Sbjct: 211 GK----PVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK-YKMNPRQWSHISESAKD 265
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
+ R L DP R + L HP++
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWL 290
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG G+ V H T + A+K+I +S Q + RE+ I + +NHPN+VK ++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 166 YDRNGEIEVLLEYMDGGSLEG---AHIR-QEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ + ++ EY GG + AH R +E RQ++S + Y H++ IVHRD+K
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 141
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
NLL+++ N+KIADFG S + ++ G Y +PE KYDG D+
Sbjct: 142 ENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGK----KYDGPEVDV 196
Query: 282 WSLGVSILEFYLGRFPF 298
WSLGV + G PF
Sbjct: 197 WSLGVILYTLVSGSLPF 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 143/283 (50%), Gaps = 29/283 (10%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIY---GNHEDSVRSQICREIEILRDVNHPNVVK 161
+++G G TV+ + A+K I+ E++++ + RE+ ++H N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-RFEREVHNSSQLSHQNIVS 75
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSGLAYLHKRKIVH 216
D+ + + +++EY++G +L +I LS + Q+L G+ + H +IVH
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTL-SEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQT-MDPCNSAVGTIAYMSPERINTDLNHGKYD 275
RDIKP N+LI+S+K +KI DFG+++ L++T + N +GT+ Y SPE+ G+
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-----GEAT 189
Query: 276 GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF--- 332
DI+S+G+ + E +G PF G+ A + AI Q P + + +D
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPF----NGETA-VSIAIKHIQDS-VPNVTTDVRKDIPQS 243
Query: 333 ----ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQI 371
I R +KD +R+ Q ++ +++ N+++ ++
Sbjct: 244 LSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYEL 286
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 27/292 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNH 156
E + +G G+ G V V T R +A+K++ +D V + E +L++ H
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQNSRH 207
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-DLAR----QVLSGLAYLHK 211
P + + + + ++EY +GG L H+ +E + S D AR +++S L YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 212 RK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +V+RD+K NL+++ ++KI DFG+ + + + GT Y++PE + D +
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE-DND 325
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+G+ A D W LGV + E GR PF D L F + + P E +
Sbjct: 326 YGR----AVDWWGLGVVMYEMMCGRLPFY---NQDHEKL-FELILMEEIRFPRTLGPEAK 377
Query: 331 DFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
+S L+KDP R A +++QH F AG + +++ PP +P
Sbjct: 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF--AGIVWQHVYEKKLSPPFKP 427
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 27/292 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNH 156
E + +G G+ G V V T R +A+K++ +D V + E +L++ H
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQNSRH 210
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-DLAR----QVLSGLAYLHK 211
P + + + + ++EY +GG L H+ +E + S D AR +++S L YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 212 RK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +V+RD+K NL+++ ++KI DFG+ + + + GT Y++PE + D +
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE-DND 328
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+G+ A D W LGV + E GR PF D L F + + P E +
Sbjct: 329 YGR----AVDWWGLGVVMYEMMCGRLPFY---NQDHEKL-FELILMEEIRFPRTLGPEAK 380
Query: 331 DFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
+S L+KDP R A +++QH F AG + +++ PP +P
Sbjct: 381 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF--AGIVWQHVYEKKLSPPFKP 430
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILR 152
+ E + +G G+ G V V T R +A+K++ +D V + E +L+
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQ 64
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-DLAR----QVLSGLA 207
+ HP + + + + ++EY +GG L H+ +E + S D AR +++S L
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 208 YLHKRK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
YLH K +V+RD+K NL+++ ++KI DFG+ + + GT Y++PE +
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS 326
D ++G+ A D W LGV + E GR PF D L F + + P
Sbjct: 184 -DNDYGR----AVDWWGLGVVMYEMMCGRLPFY---NQDHEKL-FELILMEEIRFPRTLG 234
Query: 327 REFRDFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
E + +S L+KDP R A +++QH F AG + +++ PP +P
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF--AGIVWQHVYEKKLSPPFKP 288
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 20/262 (7%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKCH 163
+G G+ V R VH T FA K+I + S R ++ RE I R + HPN+V+ H
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 164 DMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIVHRDI 219
D ++ + + GG L E R+ + +D + +Q+L +AY H IVHR++
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNL 154
Query: 220 KPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
KP NLL+ S VK+ADFG++ I + + GT Y+SPE + K D
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVL-------KKDP 206
Query: 277 YAG--DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
Y+ DIW+ GV + +G PF Q + + A + P + + E + I
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 335 RCLQKDPHSRWPAAQLLQHPFI 356
L +P R A Q L+ P+I
Sbjct: 267 SMLTVNPKKRITADQALKVPWI 288
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILR 152
+ E + +G G+ G V V T R +A+K++ +D V + E +L+
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQ 63
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-DLAR----QVLSGLA 207
+ HP + + + + ++EY +GG L H+ +E + S D AR +++S L
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 208 YLHKRK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
YLH K +V+RD+K NL+++ ++KI DFG+ + + GT Y++PE +
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS 326
D ++G+ A D W LGV + E GR PF D L F + + P
Sbjct: 183 -DNDYGR----AVDWWGLGVVMYEMMCGRLPFY---NQDHEKL-FELILMEEIRFPRTLG 233
Query: 327 REFRDFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
E + +S L+KDP R A +++QH F AG + +++ PP +P
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF--AGIVWQHVYEKKLSPPFKP 287
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 27/292 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNH 156
E + +G G+ G V V T R +A+K++ +D V + E +L++ H
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV-AHTLTENRVLQNSRH 69
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-DLAR----QVLSGLAYLHK 211
P + + + + ++EY +GG L H+ +E + S D AR +++S L YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 212 RK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
K +V+RD+K NL+++ ++KI DFG+ + + GT Y++PE + D +
Sbjct: 129 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE-DND 187
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+G+ A D W LGV + E GR PF D L F + + P E +
Sbjct: 188 YGR----AVDWWGLGVVMYEMMCGRLPFY---NQDHEKL-FELILMEEIRFPRTLGPEAK 239
Query: 331 DFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
+S L+KDP R A +++QH F AG + +++ PP +P
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF--AGIVWQHVYEKKLSPPFKP 289
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 141/317 (44%), Gaps = 65/317 (20%)
Query: 100 ELQKG----NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIEIL 151
ELQK IG GS G V + T + A+K++ N + +I E+ ++
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 152 RDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL--------------------------- 184
+ ++HPN+ + +++Y+ I +++E GG L
Sbjct: 83 KKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 185 ----EGA-------------HIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLIN 227
E A +++E ++S++ RQ+ S L YLH + I HRDIKP N L +
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 228 SSKN--VKIADFGVSRILAQTMD----PCNSAVGTIAYMSPERINTDLNHGKYDGYAGDI 281
++K+ +K+ DFG+S+ + + + GT +++PE +NT + G D
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT---NESYGPKCDA 259
Query: 282 WSLGVSILEFYLGRFPFAVGRQGDWASLMF--AICFAQPPEAPEMASREFRDFISRCLQK 339
WS GV + +G PF D S + +CF P + S RD +S L +
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY--NVLSPLARDLLSNLLNR 317
Query: 340 DPHSRWPAAQLLQHPFI 356
+ R+ A + LQHP+I
Sbjct: 318 NVDERFDAMRALQHPWI 334
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNV 159
Q +G G+ V R V + +A K+I + S R ++ RE I R + HPN+
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRKIV 215
V+ HD G ++ + + GG L + +E+ S +Q+L + + H+ +V
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 216 HRDIKPSNLLINSS---KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL+ S VK+ADFG++ + GT Y+SPE + D +G
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD-PYG 202
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
K D+W+ GV + +G PF Q + A + P + + E +D
Sbjct: 203 K----PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 258
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFI 356
I++ L +P R AA+ L+HP+I
Sbjct: 259 INKMLTINPSKRITAAEALKHPWI 282
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 17/261 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+G+ G + + + A+K Y + + + REI R + HPN+V+ ++
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q++SG++Y H ++ HRD+K
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLE 144
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KIADFG S+ P SAVGT AY++PE L +YDG D
Sbjct: 145 NTLLDGSPAPRLKIADFGYSKASVLHSQP-KSAVGTPAYIAPEV----LLKKEYDGKVAD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASLMFAICFAQPPEAPEMA--SREFRDFISRCL 337
+WS GV++ +G +PF + ++ + I Q P+ S E R ISR
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA-IPDYVHISPECRHLISRIF 258
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
DP R ++ H + L+
Sbjct: 259 VADPAKRISIPEIRNHEWFLK 279
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKC 162
+G G+ V R VH T FA K+I + S R ++ RE I R + HPN+V+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIVHRD 218
HD ++ + + GG L E R+ + +D + +Q+L +AY H IVHR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 219 IKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
+KP NLL+ S VK+ADFG++ I + + GT Y+SPE + K D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVL-------KKD 182
Query: 276 GYAG--DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
Y+ DIW+ GV + +G PF Q + + A + P + + E + I
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
L +P R A Q L+ P+I
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKC 162
+G G+ V R VH T FA K+I + S R ++ RE I R + HPN+V+
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIVHRD 218
HD ++ + + GG L E R+ + +D + +Q+L +AY H IVHR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 219 IKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
+KP NLL+ S VK+ADFG++ I + + GT Y+SPE + K D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVL-------KKD 182
Query: 276 GYAG--DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
Y+ DIW+ GV + +G PF Q + + A + P + + E + I
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
L +P R A Q L+ P+I
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKC 162
+G G+ V R VH T FA K+I + S R ++ RE I R + HPN+V+
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDLA---RQVLSGLAYLHKRKIVHRD 218
HD ++ + + GG L E R+ + +D + +Q+L +AY H IVHR+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 129
Query: 219 IKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
+KP NLL+ S VK+ADFG++ I + + GT Y+SPE + K D
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVL-------KKD 181
Query: 276 GYAG--DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
Y+ DIW+ GV + +G PF Q + + A + P + + E + I
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 334 SRCLQKDPHSRWPAAQLLQHPFI 356
L +P R A Q L+ P+I
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 22/287 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IGSG+ G + T + A+K Y ++ + REI R + HPN+V+ ++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVK--YIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q+LSG++Y H +I HRD+K
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLE 145
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KI DFG S+ P S VGT AY++PE L +YDG D
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEV----LLRQEYDGKIAD 200
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASL---MFAICFAQPPEAPEMASREFRDFISRC 336
+WS GV++ +G +PF + D+ + ++ ++ P + S E ISR
Sbjct: 201 VWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECCHLISRI 258
Query: 337 LQKDPHSRWPAAQLLQHPFILR---AGQSQVNQNLRQILPPPRPLSS 380
DP +R ++ H + L+ A + Q P +P+ S
Sbjct: 259 FVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQS 305
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 51/304 (16%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ Q + +G G+ G V H PT + A+K I + + REI+IL+ H N
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 159 VVKCH-----DMYDRNGEIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
++ D ++ E+ ++ E M D + + + + Q L + LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPCNSAVGTIA------YMS 261
++HRD+KPSNLLINS+ ++K+ DFG++RI+ A +P G + Y +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG-DWASLMFAI------- 313
PE + T + + A D+WS G + E +L R P GR L+F I
Sbjct: 191 PEVMLTSAKYSR----AMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 314 ----CFAQP------------PEAP--EMASR---EFRDFISRCLQKDPHSRWPAAQLLQ 352
C P P AP +M R + D + R L DP R A + L+
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 353 HPFI 356
HP++
Sbjct: 306 HPYL 309
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 23/265 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHE-DSVRSQICREIEILRDVNH-PNVVKCH 163
+G G V + + T + +A K + R++I EI +L P V+ H
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 164 DMYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
++Y+ EI ++LEY GG + E A + E+ + L +Q+L G+ YLH+ IVH
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL 155
Query: 218 DIKPSNLLINSSK---NVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
D+KP N+L++S ++KI DFG+SR + + +GT Y++PE +N Y
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILN-------Y 207
Query: 275 D--GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFA-ICFAQPPEAPEMASREFRD 331
D A D+W++G+ PF VG L + + E S+ D
Sbjct: 208 DPITTATDMWNIGIIAYMLLTHTSPF-VGEDNQETYLNISQVNVDYSEETFSSVSQLATD 266
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
FI L K+P R A L H ++
Sbjct: 267 FIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 55/306 (17%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ Q + +G G+ G V H PT + A+K I + + REI+IL+ H N
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 159 VVKCH-----DMYDRNGEIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
++ D ++ E+ ++ E M D + + + + Q L + LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPC------NSAVGTIAYMS 261
++HRD+KPSNLLINS+ ++K+ DFG++RI+ A +P V T Y +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS---LMFAI----- 313
PE + T + + A D+WS G + E +L R P GR D+ L+F I
Sbjct: 191 PEVMLTSAKYSR----AMDVWSCGCILAELFLRR-PIFPGR--DYRHQLLLIFGIIGTPH 243
Query: 314 ------CFAQP------------PEAP--EMASR---EFRDFISRCLQKDPHSRWPAAQL 350
C P P AP +M R + D + R L DP R A +
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 351 LQHPFI 356
L+HP++
Sbjct: 304 LEHPYL 309
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 15/268 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHP 157
+ Q +G G+ V R V ++ +A K+I + S R ++ RE I R + HP
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKII-NTKKLSARDHQKLEREARICRLLKHP 90
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
N+V+ HD G ++ + + GG L + +E+ S Q+L + ++H+
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 214 IVHRDIKPSNLLINSS---KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
IVHRD+KP NLL+ S VK+ADFG++ + GT Y+SPE + D
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD-P 209
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+GK DIW+ GV + +G PF Q + A + P + + E +
Sbjct: 210 YGK----PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 265
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
+ I++ L +P R A Q L+HP++ +
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQ 293
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 131/303 (43%), Gaps = 49/303 (16%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ Q + +G G+ G V H PT + A+K I + + REI+IL+ H N
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 159 VVKCH-----DMYDRNGEIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHK 211
++ D ++ E+ ++ E M D + + + + Q L + LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPCNSAVGTIAYM------S 261
++HRD+KPSNLLINS+ ++K+ DFG++RI+ A +P G Y+ +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAI-------- 313
PE + T + + A D+WS G + E +L R F L+F I
Sbjct: 191 PEVMLTSAKYSR----AMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 314 ---CFAQP------------PEAP--EMASR---EFRDFISRCLQKDPHSRWPAAQLLQH 353
C P P AP +M R + D + R L DP R A + L+H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 354 PFI 356
P++
Sbjct: 307 PYL 309
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 19/291 (6%)
Query: 95 LINPAELQK---GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIE 149
L++P +++ G +G G + + T VFA KV+ + + + ++ EI
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSG 205
I + +++P+VV H ++ + + V+LE SL H R++ + AR Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
+ YLH +++HRD+K NL +N +VKI DFG++ + + + GT Y++PE +
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL 214
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
K + DIWSLG + +G+ PF + + ++ P +A
Sbjct: 215 CK-----KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPR 376
S I R L DP R A+LL F +G + + + PPR
Sbjct: 270 SA----LIRRMLHADPTLRPSVAELLTDEF-FTSGYAPMRLPTSCLTVPPR 315
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 17/261 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IGSG+ G + ++ + A+K Y + + + + REI R + HPN+V+ ++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVK--YIERGEKIAANVKREIINHRSLRHPNIVRFKEVI 84
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q++SG++Y H ++ HRD+K
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLE 144
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KI DFG S+ P S VGT AY++PE L +YDG D
Sbjct: 145 NTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEV----LLKKEYDGKVAD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASLMFAICFAQPPEAPEMA--SREFRDFISRCL 337
+WS GV++ +G +PF + ++ + I Q P+ S E R ISR
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA-IPDYVHISPECRHLISRIF 258
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
DP R ++ H + L+
Sbjct: 259 VADPAKRISIPEIRNHEWFLK 279
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 19/291 (6%)
Query: 95 LINPAELQK---GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIE 149
L++P +++ G +G G + + T VFA KV+ + + + ++ EI
Sbjct: 19 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 78
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSG 205
I + +++P+VV H ++ + + V+LE SL H R++ + AR Q + G
Sbjct: 79 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
+ YLH +++HRD+K NL +N +VKI DFG++ + + GT Y++PE +
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 198
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
K + DIWSLG + +G+ PF + + ++ P +A
Sbjct: 199 CK-----KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 253
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPR 376
S I R L DP R A+LL F +G + + + PPR
Sbjct: 254 SA----LIRRMLHADPTLRPSVAELLTDEF-FTSGYAPMRLPTSCLTVPPR 299
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILR 152
I EL K +G GS G V+ T++ FA+K + + +D V + + +
Sbjct: 17 IEDFELHK--MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGL 206
HP + + + ++EY++GG L HI+ H DL+R +++ GL
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKF-DLSRATFYAAEIILGL 132
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
+LH + IV+RD+K N+L++ ++KIADFG+ + N GT Y++PE +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL- 191
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS 326
G+ ++ D WS GV + E +G+ PF G +F P P
Sbjct: 192 ----LGQKYNHSVDWWSFGVLLYEMLIGQSPF----HGQDEEELFHSIRMDNPFYPRWLE 243
Query: 327 REFRDFISRCLQKDPHSRWPA-AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
+E +D + + ++P R + QHP ++ + ++I PP RP
Sbjct: 244 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELER--KEIDPPFRP 293
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 35/282 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN-HPNVVKCHDM 165
+G G+ V V + +A+K+I S RS++ RE+E L + N+++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHS-RSRVFREVETLYQCQGNKNILELIEF 79
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHI-RQEHI----LSDLARQVLSGLAYLHKRKIVHRDIK 220
++ + ++ E + GGS+ AHI +Q+H S + R V + L +LH + I HRD+K
Sbjct: 80 FEDDTRFYLVFEKLQGGSIL-AHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 221 PSNLLINSSKN---VKIADF--GVSRILAQTMDP-----CNSAVGTIAYMSPERINTDLN 270
P N+L S + VKI DF G L + P + G+ YM+PE + +
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG---DWA-SLMFAICFAQPPEAPEMAS 326
+ D+WSLGV +L L +P VG G W + +C + E+ +
Sbjct: 199 QATFYDKRCDLWSLGV-VLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 327 REF------------RDFISRCLQKDPHSRWPAAQLLQHPFI 356
EF +D IS+ L +D R AAQ+LQHP++
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 19/291 (6%)
Query: 95 LINPAELQK---GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIE 149
L++P +++ G +G G + + T VFA KV+ + + + ++ EI
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSG 205
I + +++P+VV H ++ + + V+LE SL H R++ + AR Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
+ YLH +++HRD+K NL +N +VKI DFG++ + + GT Y++PE +
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 214
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
K + DIWSLG + +G+ PF + + ++ P +A
Sbjct: 215 CK-----KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPR 376
S I R L DP R A+LL F +G + + + PPR
Sbjct: 270 SA----LIRRMLHADPTLRPSVAELLTDEF-FTSGYAPMRLPTSCLTVPPR 315
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 53/292 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVN---HPNVVKC 162
IG G+ GTV++ P + ALK + N E+ + RE+ +LR + HPNVV+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 163 HDM-----YDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGLAYL 209
D+ DR ++ ++ E Y+D G + DL RQ L GL +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---PAETIKDLMRQFLRGLDFL 128
Query: 210 HKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDL 269
H IVHRD+KP N+L+ S VK+ADFG++RI + M + V T+ Y +PE L
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALDPVVVTLWYRAPEV----L 183
Query: 270 NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--------- 320
Y D+WS+G E + + F + D +F + PPE
Sbjct: 184 LQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL-IGLPPEDDWPRDVSL 241
Query: 321 ----------------APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
PEM + + L +PH R A + LQH ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 17/261 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IGSG+ G + ++ + A+K Y + + + REI R + HPN+V+ ++
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q++SG++Y H ++ HRD+K
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLE 143
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KI DFG S+ P S VGT AY++PE L +YDG D
Sbjct: 144 NTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEV----LLKKEYDGKVAD 198
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASLMFAICFAQPPEAPEMA--SREFRDFISRCL 337
+WS GV++ +G +PF + ++ + I Q P+ S E R ISR
Sbjct: 199 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA-IPDYVHISPECRHLISRIF 257
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
DP R ++ H + L+
Sbjct: 258 VADPAKRISIPEIRNHEWFLK 278
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 138/313 (44%), Gaps = 50/313 (15%)
Query: 107 IGSGSGGTVWRVVHPPTS-RVFALK-VIYGNHEDSVRSQICREIEILRDVN---HPNVVK 161
IG G+ G V++ R ALK V E+ + RE+ +LR + HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 162 CHDM-----YDRNGEIEVLLEYMDGGSLEGAHIRQE-----HILSDLARQVLSGLAYLHK 211
D+ DR ++ ++ E++D E + D+ Q+L GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++VHRD+KP N+L+ SS +K+ADFG++RI + M S V T+ Y +PE +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVL------ 191
Query: 272 GKYDGYAG--DIWSLGVSILEFY--------------LGRFPFAVGRQG--DWASLM--- 310
YA D+WS+G E + LG+ +G G DW +
Sbjct: 192 -LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 311 ---FAICFAQPPEAPEMASREF-RDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQ 366
F AQP E E +D + +CL +P R A L HP+ + +
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF--QDLERCKE 308
Query: 367 NLRQILPPPRPLS 379
NL LPP + S
Sbjct: 309 NLDSHLPPSQNTS 321
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EYM GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +K+ADFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 19/291 (6%)
Query: 95 LINPAELQK---GNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIE 149
L++P +++ G +G G + + T VFA KV+ + + + ++ EI
Sbjct: 35 LVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIA 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSG 205
I + +++P+VV H ++ + + V+LE SL H R++ + AR Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERI 265
+ YLH +++HRD+K NL +N +VKI DFG++ + + GT Y++PE +
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL 214
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMA 325
K + DIWSLG + +G+ PF + + ++ P +A
Sbjct: 215 CK-----KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 326 SREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPR 376
S I R L DP R A+LL F +G + + + PPR
Sbjct: 270 SA----LIRRMLHADPTLRPSVAELLTDEF-FTSGYAPMRLPTSCLTVPPR 315
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EYM GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +K+ADFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 23/281 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G GS G V+ T++ FA+K + + +D V + + + HP +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGLAYLHKRKIVHR 217
+ + ++EY++GG L HI+ H DL+R +++ GL +LH + IV+R
Sbjct: 85 CTFQTKENLFFVMEYLNGGDL-MYHIQSCHKF-DLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
D+K N+L++ ++KIADFG+ + N GT Y++PE + G+ +
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL-----LGQKYNH 197
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCL 337
+ D WS GV + E +G+ PF G +F P P +E +D + +
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPF----HGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 253
Query: 338 QKDPHSRWPA-AQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
++P R + QHP ++ + ++I PP RP
Sbjct: 254 VREPEKRLGVRGDIRQHPLFREINWEELER--KEIDPPFRP 292
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 15/266 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR--SQICREIEILRDVNHP 157
E Q +G G+ V R V + +A +I + S R ++ RE I R + HP
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMII-NTKKLSARDHQKLEREARICRLLKHP 70
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
N+V+ HD G ++ + + GG L + +E+ S +Q+L + + H+
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 214 IVHRDIKPSNLLINSS---KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
+VHR++KP NLL+ S VK+ADFG++ + GT Y+SPE + D
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD-P 189
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
+GK D+W+ GV + +G PF Q + A + P + + E +
Sbjct: 190 YGK----PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFI 356
D I++ L +P R AA+ L+HP+I
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVN---HPNVVKC 162
IG G+ GTV++ P + ALK + N E+ + RE+ +LR + HPNVV+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 163 HDM-----YDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGLAYL 209
D+ DR ++ ++ E Y+D G + DL RQ L GL +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---PAETIKDLMRQFLRGLDFL 128
Query: 210 HKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDL 269
H IVHRD+KP N+L+ S VK+ADFG++RI + M V T+ Y +PE L
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALAPVVVTLWYRAPEV----L 183
Query: 270 NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--------- 320
Y D+WS+G E + + F + D +F + PPE
Sbjct: 184 LQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL-IGLPPEDDWPRDVSL 241
Query: 321 ----------------APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
PEM + + L +PH R A + LQH ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 27/262 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH-------EDSVRSQICREIEILRDVNHPNV 159
+GSG+ G VW V ++ +K I ED ++ EI IL V H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 160 VKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ-----EHILSDLARQVLSGLAYLHKRKI 214
+K D+++ G ++++E G A I + E + S + RQ++S + YL + I
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI 151
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKY 274
+HRDIK N++I +K+ DFG + L + + GTI Y +PE L Y
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEV----LMGNPY 206
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
G ++WSLGV++ PF + A++ P + S+E +S
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI----------HPPYLVSKELMSLVS 256
Query: 335 RCLQKDPHSRWPAAQLLQHPFI 356
LQ P R +L+ P++
Sbjct: 257 GLLQPVPERRTTLEKLVTDPWV 278
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI-YGNHEDSVRSQICREIEILRDVN---HPNVVKC 162
IG G+ GTV++ P + ALK + N E+ + RE+ +LR + HPNVV+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 163 HDM-----YDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGLAYL 209
D+ DR ++ ++ E Y+D G + DL RQ L GL +L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---PAETIKDLMRQFLRGLDFL 128
Query: 210 HKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDL 269
H IVHRD+KP N+L+ S VK+ADFG++RI + M V T+ Y +PE L
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-ALFPVVVTLWYRAPEV----L 183
Query: 270 NHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--------- 320
Y D+WS+G E + + F + D +F + PPE
Sbjct: 184 LQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL-IGLPPEDDWPRDVSL 241
Query: 321 ----------------APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
PEM + + L +PH R A + LQH ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +K+ADFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 43/286 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN-HPNVVKCHDM 165
+G G+ V ++ TS+ +A+K+I +RS++ RE+E+L H NV++ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIVHRDIK 220
++ ++ E M GGS+ +HI + ++L + V S L +LH + I HRD+K
Sbjct: 80 FEEEDRFYLVFEKMRGGSIL-SHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 221 PSNLLI---NSSKNVKIADFGVSRILA-----------QTMDPCNSAVGTIAYMSPERIN 266
P N+L N VKI DFG+ + + + PC SA YM+PE +
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA----EYMAPEVVE 194
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD---W---------ASLMFAIC 314
D+WSLGV IL L +P VGR G W +++F
Sbjct: 195 AFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 315 FAQPPEAPEM----ASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
E P+ S +D IS+ L +D R AAQ+LQHP++
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
IG G+ G V V H T +V+A+K++ + + S + E +I+ N P VV+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + + +++EYM GG L + + AR +V+ L +H +HRD+K
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVK 195
Query: 221 PSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
P N+L++ S ++K+ADFG ++ + M C++AVGT Y+SPE + + G Y G
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY-GREC 254
Query: 280 DIWSLGVSILEFYLGRFPF-AVGRQGDWASLM 310
D WS+GV + E +G PF A G ++ +M
Sbjct: 255 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
IG G+ G V V H T +V+A+K++ + + S + E +I+ N P VV+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + + +++EYM GG L + + AR +V+ L +H +HRD+K
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVK 200
Query: 221 PSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
P N+L++ S ++K+ADFG ++ + M C++AVGT Y+SPE + + G Y G
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY-GREC 259
Query: 280 DIWSLGVSILEFYLGRFPF-AVGRQGDWASLM 310
D WS+GV + E +G PF A G ++ +M
Sbjct: 260 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI--YGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
IG G+ G V V H T +V+A+K++ + + S + E +I+ N P VV+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
+ + + +++EYM GG L + + AR +V+ L +H +HRD+K
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNL-MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVK 200
Query: 221 PSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
P N+L++ S ++K+ADFG ++ + M C++AVGT Y+SPE + + G Y G
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY-GREC 259
Query: 280 DIWSLGVSILEFYLGRFPF-AVGRQGDWASLM 310
D WS+GV + E +G PF A G ++ +M
Sbjct: 260 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 17/261 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IGSG+ G + ++ + A+K Y + + + REI R + HPN+V+ ++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q++SG++Y H ++ HRD+K
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLE 144
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KI FG S+ P S VGT AY++PE L +YDG D
Sbjct: 145 NTLLDGSPAPRLKICAFGYSKSSVLHSQP-KSTVGTPAYIAPEV----LLKKEYDGKVAD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASLMFAICFAQPPEAPEMA--SREFRDFISRCL 337
+WS GV++ +G +PF + ++ + I Q P+ S E R ISR
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA-IPDYVHISPECRHLISRIF 258
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
DP R ++ H + L+
Sbjct: 259 VADPAKRISIPEIRNHEWFLK 279
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T FA+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T FA+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T FA+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHP 157
P E+++ R+G+G G V R +H T A+K R + C EI+I++ +NHP
Sbjct: 16 PWEMKE--RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 158 NVVKCHDMYDRNGEIE------VLLEYMDGGSL-------EGAHIRQEHILSDLARQVLS 204
NVV ++ D ++ + +EY +GG L E +E + L + S
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNV---KIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L YLH+ +I+HRD+KP N+++ KI D G ++ L Q + C VGT+ Y++
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLA 192
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF 298
PE L KY D WS G E G PF
Sbjct: 193 PEL----LEQKKYT-VTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHP 157
P E+++ R+G+G G V R +H T A+K R + C EI+I++ +NHP
Sbjct: 15 PWEMKE--RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 158 NVVKCHDMYDRNGEIE------VLLEYMDGGSL-------EGAHIRQEHILSDLARQVLS 204
NVV ++ D ++ + +EY +GG L E +E + L + S
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNV---KIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L YLH+ +I+HRD+KP N+++ KI D G ++ L Q + C VGT+ Y++
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLA 191
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF 298
PE L KY D WS G E G PF
Sbjct: 192 PEL----LEQKKYT-VTVDYWSFGTLAFECITGFRPF 223
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 39/267 (14%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIE---- 149
N A L + RI G+GS G V V H T +A+K++ D + +EIE
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLKEIEHTLN 90
Query: 150 ---ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQ 201
IL+ VN P +VK + N + +++EY GG + +H+R+ S+ A Q
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQ 149
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYM 260
++ YLH +++RD+KP NL+I+ +K+ DFG++ R+ +T C GT Y+
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----GTPEYL 205
Query: 261 SPERINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP 318
+PE I + GY A D W+LGV I E G PF D ++ +
Sbjct: 206 APEIILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGK 254
Query: 319 PEAPEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 25/278 (8%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
N IG GS G V V T A K I + V + +EIEI++ ++HPN+++ ++
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-DRFKQEIEIMKSLDHPNIIRLYE 73
Query: 165 MYDRNGEIEVLLEYMDGGSL--EGAHIR--QEHILSDLARQVLSGLAYLHKRKIVHRDIK 220
++ N +I +++E GG L H R +E + + + VLS +AY HK + HRD+K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 221 PSNLLI---NSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKY 274
P N L + +K+ DFG LA P + VGT Y+SP+ + G Y
Sbjct: 134 PENFLFLTDSPDSPLKLIDFG----LAARFKPGKMMRTKVGTPYYVSPQVL-----EGLY 184
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
G D WS GV + G PF+ + + F P + S + I
Sbjct: 185 -GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 335 RCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
R L K P R + Q L+H + + Q++ + R +L
Sbjct: 244 RLLTKSPKQRITSLQALEHEWF----EKQLSSSPRNLL 277
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 48/290 (16%)
Query: 107 IGSGSGGTVWRVVHPPTS-RVFALK-VIYGNHEDSVRSQICREIEILRDVN---HPNVVK 161
IG G+ G V++ R ALK V E+ + RE+ +LR + HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 162 CHDM-----YDRNGEIEVLLEYMDGGSLEGAHIRQE-----HILSDLARQVLSGLAYLHK 211
D+ DR ++ ++ E++D E + D+ Q+L GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++VHRD+KP N+L+ SS +K+ADFG++RI + M S V T+ Y +PE +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQ---- 193
Query: 272 GKYDGYAG--DIWSLGVSILEFY--------------LGRFPFAVGRQG--DWASLM--- 310
YA D+WS+G E + LG+ +G G DW +
Sbjct: 194 ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 311 ---FAICFAQPPEAPEMASREF-RDFISRCLQKDPHSRWPAAQLLQHPFI 356
F AQP E E +D + +CL +P R A L HP+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 48/290 (16%)
Query: 107 IGSGSGGTVWRVVHPPTS-RVFALK-VIYGNHEDSVRSQICREIEILRDVN---HPNVVK 161
IG G+ G V++ R ALK V E+ + RE+ +LR + HPNVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 162 CHDM-----YDRNGEIEVLLEYMDGGSLEGAHIRQE-----HILSDLARQVLSGLAYLHK 211
D+ DR ++ ++ E++D E + D+ Q+L GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
++VHRD+KP N+L+ SS +K+ADFG++RI + M S V T+ Y +PE +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQ---- 193
Query: 272 GKYDGYAG--DIWSLGVSILEFY--------------LGRFPFAVGRQG--DWASLM--- 310
YA D+WS+G E + LG+ +G G DW +
Sbjct: 194 ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 311 ---FAICFAQPPEAPEMASREF-RDFISRCLQKDPHSRWPAAQLLQHPFI 356
F AQP E E +D + +CL +P R A L HP+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNH----EDSVRSQICREIEILRDVNHP 157
+K + +G G TV++ T+++ A+K I H +D + REI++L++++HP
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGG----------SLEGAHIRQEHILSDLARQVLSGLA 207
N++ D + I ++ ++M+ L +HI+ +++ L GL
Sbjct: 73 NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT------LQGLE 126
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
YLH+ I+HRD+KP+NLL++ + +K+ADFG+++ V T Y +PE
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL--- 183
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVG 301
L + G D+W++G + E L R PF G
Sbjct: 184 -LFGARMYGVGVDMWAVGCILAELLL-RVPFLPG 215
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 25/278 (8%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
N IG GS G V V T A K I + V + +EIEI++ ++HPN+++ ++
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-DRFKQEIEIMKSLDHPNIIRLYE 90
Query: 165 MYDRNGEIEVLLEYMDGGSL--EGAHIR--QEHILSDLARQVLSGLAYLHKRKIVHRDIK 220
++ N +I +++E GG L H R +E + + + VLS +AY HK + HRD+K
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 221 PSNLLI---NSSKNVKIADFGVSRILAQTMDP---CNSAVGTIAYMSPERINTDLNHGKY 274
P N L + +K+ DFG LA P + VGT Y+SP+ + G Y
Sbjct: 151 PENFLFLTDSPDSPLKLIDFG----LAARFKPGKMMRTKVGTPYYVSPQVL-----EGLY 201
Query: 275 DGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFIS 334
G D WS GV + G PF+ + + F P + S + I
Sbjct: 202 -GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 335 RCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
R L K P R + Q L+H + + Q++ + R +L
Sbjct: 261 RLLTKSPKQRITSLQALEHEWF----EKQLSSSPRNLL 294
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V + + SR +A+K I H + S I E+ +L +NH VV+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 167 -------------DRNGEIEVLLEYMDGGSLEGAHIRQEHILSD------LARQVLSGLA 207
+ + + +EY + G+L I E++ L RQ+L L+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL-IHSENLNQQRDEYWRLFRQILEALS 130
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTM--------------DPCNSA 253
Y+H + I+HRD+KP N+ I+ S+NVKI DFG+++ + +++ D SA
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG-DWASLMFA 312
+GT Y++ E ++ G Y+ D++SLG+ E +PF+ G + + + +
Sbjct: 191 IGTAMYVATEVLD---GTGHYNEKI-DMYSLGIIFFEMI---YPFSTGMERVNILKKLRS 243
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQV 364
+ PP+ + + + I + DP+ R A LL ++ Q +V
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEV 295
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
I + VN P +VK + N + ++LEY GG + +H+R+ S+ A Q++
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +K+ADFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 23 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 80
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 139
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 195
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 196 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 244
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 245 PSHFSSDLKDLLRNLLQVDLTKRF 268
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 37 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + + GT Y++PE ++ K + D
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK-----KGHSFEVD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 255
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 256 PTARPTINELLNDEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + + GT Y++PE ++ K + D
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK-----KGHSFEVD 203
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 259
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 260 PTARPTINELLNDEFF 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + + GT Y++PE ++ K + D
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK-----KGHSFEVD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 255
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 256 PTARPTINELLNDEFF 271
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHP 157
E Q IG G+ V R V T +A K+I + S R ++ RE I R + H
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKII-NTKKLSARDHQKLEREARICRLLKHS 63
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
N+V+ HD G ++ + + GG L + +E+ S +Q+L + + H+
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 214 IVHRDIKPSNLLINSS---KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
+VHRD+KP NLL+ S VK+ADFG++ + GT Y+SPE + +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
G DIW+ GV + +G PF Q + A + P + + E +
Sbjct: 184 -----GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILR 358
+ I++ L +P R A + L+HP++ +
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQ 266
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 132/301 (43%), Gaps = 61/301 (20%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G G V+ V + A+K I SV+ + REI+I+R ++H N+VK ++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL-REIKIIRRLDHDNIVKVFEIL 77
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR-----------------QVLSGLAYL 209
+G ++ + L +I QE++ +DLA Q+L GL Y+
Sbjct: 78 GPSGS-QLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 210 HKRKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIA-------YMS 261
H ++HRD+KP+NL IN+ V KI DFG++RI MDP S G ++ Y S
Sbjct: 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARI----MDPHYSHKGHLSEGLVTKWYRS 192
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMF-AICFAQPPE 320
P + + N+ K A D+W+ G E G+ FA + + L+ +I +
Sbjct: 193 PRLLLSPNNYTK----AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 321 APEM-------------------------ASREFRDFISRCLQKDPHSRWPAAQLLQHPF 355
E+ SRE DF+ + L P R A + L HP+
Sbjct: 249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308
Query: 356 I 356
+
Sbjct: 309 M 309
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADEPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 86
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 145
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 201
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 202 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 250
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 57 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 114
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 173
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ T C GT Y++PE
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC----GTPEYLAPE 229
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 230 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 278
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 22/276 (7%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDV 154
I +E+ RIGSGS GTV++ V LKV+ E + Q R E+ +LR
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPE---QFQAFRNEVAVLRKT 89
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYL 209
H N++ Y + ++ ++ +G SL + H+++ L D+ARQ G+ YL
Sbjct: 90 RHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 210 HKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ--TMDPCNSAVGTIAYMSPERINT 267
H + I+HRD+K +N+ ++ VKI DFG++ + ++ G++ +M+PE I
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP--PEAPEMA 325
N+ + D++S G+ + E G P++ D M +A P + +
Sbjct: 209 QDNNPF--SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266
Query: 326 SREFRDFISRCLQKDPHSR------WPAAQLLQHPF 355
+ + ++ C++K R + +LLQH
Sbjct: 267 PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 20/250 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ----ICREIEILRDVNHPNVVKC 162
IG GS G V V T +++A+K Y N + V + +E++I++ + HP +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMK--YMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ ++ ++++ + GG L + H ++E + + V++ L YL ++I+HR
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA-LDYLQNQRIIHR 139
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
D+KP N+L++ +V I DF ++ +L + + GT YM+PE ++ G +
Sbjct: 140 DMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRKGAGY--SF 196
Query: 278 AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM--FAICFAQPPEAPEMASREFRDFISR 335
A D WSLGV+ E GR P+ + ++ F P A S+E + +
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA---WSQEMVSLLKK 253
Query: 336 CLQKDPHSRW 345
L+ +P R+
Sbjct: 254 LLEPNPDQRF 263
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 57 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 114
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 173
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 229
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 230 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 278
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 17/261 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IGSG+ G + ++ + A+K Y + + + REI R + HPN+V+ ++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 167 DRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIKPS 222
+ +++EY GG L D AR Q++SG++Y H ++ HRD+K
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLE 144
Query: 223 NLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
N L++ S +KI FG S+ P ++ VGT AY++PE L +YDG D
Sbjct: 145 NTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT-VGTPAYIAPEV----LLKKEYDGKVAD 199
Query: 281 IWSLGVSILEFYLGRFPFAVGRQ-GDWASLMFAICFAQPPEAPEMA--SREFRDFISRCL 337
+WS GV++ +G +PF + ++ + I Q P+ S E R ISR
Sbjct: 200 VWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA-IPDYVHISPECRHLISRIF 258
Query: 338 QKDPHSRWPAAQLLQHPFILR 358
DP R ++ H + L+
Sbjct: 259 VADPAKRISIPEIRNHEWFLK 279
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 39/267 (14%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIE---- 149
N A L + RI G+GS G V V H T +A+K++ D + +EIE
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLKEIEHTLN 90
Query: 150 ---ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQ 201
IL+ VN P +VK + N + +++EY GG + +H+R+ S+ A Q
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQ 149
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYM 260
++ YLH +++RD+KP NL+I+ +++ DFG++ R+ +T C GT Y+
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----GTPEYL 205
Query: 261 SPERINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP 318
+PE I + GY A D W+LGV I E G PF D ++ +
Sbjct: 206 APEIILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGK 254
Query: 319 PEAPEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 22 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 79
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 138
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPE 194
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 195 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 243
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 244 PSHFSSDLKDLLRNLLQVDLTKRF 267
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 33/259 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKD 340
P S + +D + LQ D
Sbjct: 258 PSHFSSDLKDLLRNLLQVD 276
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ ++ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFAEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN-HPNVVKCHDM 165
+G G+ V ++ TS+ +A+K+I +RS++ RE+E+L H NV++ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 166 YDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIVHRDIK 220
++ ++ E M GGS+ +HI + ++L + V S L +LH + I HRD+K
Sbjct: 80 FEEEDRFYLVFEKMRGGSIL-SHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 221 PSNLLI---NSSKNVKIADFGVSRILA-----------QTMDPCNSAVGTIAYMSPERIN 266
P N+L N VKI DF + + + + PC SA YM+PE +
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA----EYMAPEVVE 194
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD---W---------ASLMFAIC 314
D+WSLGV IL L +P VGR G W +++F
Sbjct: 195 AFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 315 FAQPPEAPEM----ASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
E P+ S +D IS+ L +D R AAQ+LQHP++
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IIIS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + GT Y++PE ++ K + D
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK-----KGHSFEVD 221
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 277
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 278 PTARPTINELLNDEFF 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + GT Y++PE ++ K + D
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK-----KGHSFEVD 223
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 279
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 280 PTARPTINELLNDEFF 295
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I + G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYQMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 57 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 114
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHARFYAAQIVL 173
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 229
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 230 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 278
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 31 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 88
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHARFYAAQIVL 147
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 203
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 204 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 252
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 253 PSHFSSDLKDLLRNLLQVDLTKRF 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNH--EDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G + + T VFA K++ + + R ++ EI I R + H +VV H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHKRKIVHRDIK 220
++ N + V+LE SL H R++ + AR Q++ G YLH+ +++HRD+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 221 PSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGD 280
NL +N VKI DFG++ + + GT Y++PE ++ K + D
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK-----KGHSFEVD 197
Query: 281 IWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKD 340
+WS+G + +G+ PF + + ++ P +A+ I + LQ D
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA----SLIQKMLQTD 253
Query: 341 PHSRWPAAQLLQHPFI 356
P +R +LL F
Sbjct: 254 PTARPTINELLNDEFF 269
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 86
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 145
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 201
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 202 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 250
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++P
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPA 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 124/295 (42%), Gaps = 56/295 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQI----CREIEILRDVN---HPNV 159
IG G+ GTV++ P + ALK + + + RE+ +LR + HPNV
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 160 VKCHDM-----YDRNGEIEVLLE--------YMDGGSLEGAHIRQEHILSDLARQVLSGL 206
V+ D+ DR ++ ++ E Y+D G + DL RQ L GL
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---PAETIKDLMRQFLRGL 133
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
+LH IVHRD+KP N+L+ S VK+ADFG++RI + M V T+ Y +PE
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRAPEV-- 190
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE------ 320
L Y D+WS+G E + + F + D +F + PPE
Sbjct: 191 --LLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL-IGLPPEDDWPRD 246
Query: 321 -------------------APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
PEM + + L +PH R A + LQH ++
Sbjct: 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P + K + N + +++EY GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
+L +IG+GS GTV R + + + H + V ++ RE+ I++ + HPN
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPN 95
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL------EGA--HIRQEHILSDLARQVLSGLAYLH 210
+V + + ++ EY+ GSL GA + + LS +A V G+ YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS-MAYDVAKGMNYLH 154
Query: 211 KRK--IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
R IVHR++K NLL++ VK+ DFG+SR+ A T SA GT +M+PE + +
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASR 327
++ K D++S GV + E + P+ + A ++ A+ F + E P +
Sbjct: 215 PSNEK-----SDVYSFGVILWELATLQQPWG---NLNPAQVVAAVGFKCKRLEIPRNLNP 266
Query: 328 EFRDFISRCLQKDPHSR 344
+ I C +P R
Sbjct: 267 QVAAIIEGCWTNEPWKR 283
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P + K + N + +++EY GG + +H+R+ S+ A Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 71
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 131
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 187
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 188 DVWSCGIVLTAMLAGELPW 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ + A Q++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 36 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY GG + +H+R+ + A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 44/292 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V + + SR +A+K I H + S I E+ +L +NH VV+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 167 -------------DRNGEIEVLLEYMDGGSLEGAHIRQEHILSD------LARQVLSGLA 207
+ + + +EY + +L I E++ L RQ+L L+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDL-IHSENLNQQRDEYWRLFRQILEALS 130
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTM--------------DPCNSA 253
Y+H + I+HRD+KP N+ I+ S+NVKI DFG+++ + +++ D SA
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG-DWASLMFA 312
+GT Y++ E ++ G Y+ D++SLG+ E +PF+ G + + + +
Sbjct: 191 IGTAMYVATEVLD---GTGHYNEKI-DMYSLGIIFFEMI---YPFSTGMERVNILKKLRS 243
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQV 364
+ PP+ + + + I + DP+ R A LL ++ Q +V
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEV 295
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW----XLAGTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T C GT ++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEALAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I + +NH NVVK + +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 72
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL----LKRREFHAEPV 188
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 189 DVWSCGIVLTAMLAGELPW 207
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A+L + +RI G+GS G V V H + +A+K++ + + V+ E
Sbjct: 36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 93
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P +VK + N + +++EY+ GG + +H+R+ S+ A Q++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NLLI+ +++ DFG + R+ +T GT Y++PE
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW----XLXGTPEYLAPE 208
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 209 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 257
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 26/285 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G GS G V T ++A+KV+ + +D V + + + NHP + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + ++E+++GG L HI++ + A +++S L +LH + I++RD
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLM-FHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
+K N+L++ + K+ADFG+ + + GT Y++PE + L G A
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY-----GPA 204
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W++GV + E G PF + D + P E A+ + F++
Sbjct: 205 VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT---- 260
Query: 339 KDPHSRWPAAQ------LLQHPFILRAGQSQVNQNLRQILPPPRP 377
K+P R + +L+HPF +Q+N RQI PP RP
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNH--RQIEPPFRP 303
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 25/268 (9%)
Query: 104 GNRIGSGSGGTVWRVVHPPT---SRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
G+ +G GS G V V+ T V LK + + + +EI++LR + H NV+
Sbjct: 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 161 KCHDMY--DRNGEIEVLLEYMDGGSLEGAH--------IRQEHILSDLARQVLSGLAYLH 210
+ D+ + ++ +++EY G E + Q H Q++ GL YLH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH---GYFCQLIDGLEYLH 126
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPERINTD 268
+ IVH+DIKP NLL+ + +KI+ GV+ L D C ++ G+ A+ PE N
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN-- 184
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
+ G+ DIWS GV++ G +PF +GD +F P
Sbjct: 185 -GLDTFSGFKVDIWSAGVTLYNITTGLYPF----EGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
D + L+ +P R+ Q+ QH +
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 97 NPAELQKGNRI---GSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIE 149
N A L + RI G+GS G V V H T +A+K++ + + V+ E
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKR 94
Query: 150 ILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLS 204
IL+ VN P + K + N + +++EY GG + +H+R+ + A Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFXEPHARFYAAQIVL 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPE 263
YLH +++RD+KP NL+I+ +K+ DFG + R+ +T C GT Y++PE
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPE 209
Query: 264 RINTDLNHGKYDGY--AGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
I + GY A D W+LGV I E G PF D ++ +
Sbjct: 210 IILS-------KGYNKAVDWWALGVLIYEMAAGYPPFF----ADQPIQIYEKIVSGKVRF 258
Query: 322 PEMASREFRDFISRCLQKDPHSRW 345
P S + +D + LQ D R+
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V V+ T A+K++ I +EI I +NH NVVK + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-H 73
Query: 167 DRNGEIEVL-LEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
R G I+ L LEY GG L E E Q+++G+ YLH I HRDIKP
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 222 SNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
NLL++ N+KI+DFG++ + N GT+ Y++PE L ++
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL----LKRREFHAEPV 189
Query: 280 DIWSLGVSILEFYLGRFPF 298
D+WS G+ + G P+
Sbjct: 190 DVWSCGIVLTAMLAGELPW 208
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 15/257 (5%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G G V R V + + + K + D V + +EI IL H N++ H+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL--VKKEISILNIARHRNILHLHESF 70
Query: 167 DRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKP 221
+ E+ ++ E++ G + A E + QV L +LH I H DI+P
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130
Query: 222 SNLLINS--SKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAG 279
N++ + S +KI +FG +R + P ++ + + +PE +++ A
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQAR----QLKPGDNF--RLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 280 DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQK 339
D+WSLG + G PF + + EA + S E DF+ R L K
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 340 DPHSRWPAAQLLQHPFI 356
+ SR A++ LQHP++
Sbjct: 245 ERKSRMTASEALQHPWL 261
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 135/310 (43%), Gaps = 56/310 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + V KV+ + RE++I+R V HPNVV +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVVDLKAFF 101
Query: 167 DRNGE------IEVLLEYMDG----GSLEGAHIRQEH---ILSDLARQVLSGLAYLHKRK 213
NG+ + ++LEY+ S A ++Q ++ Q+L LAY+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++IL +P S + + Y +PE I N+
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSXICSRYYRAPELIFGATNYT 220
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA----------- 321
DIWS G + E G+ P G G + P
Sbjct: 221 T----NIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275
Query: 322 -------PEMASREFR--------DFISRCLQKDPHSRWPAAQLLQHPFI--LRAGQSQV 364
P S+ FR D ISR L+ P +R A + L HPF LR G++++
Sbjct: 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARM 335
Query: 365 NQNLRQILPP 374
N R+ LPP
Sbjct: 336 -PNGRE-LPP 343
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
+L +IG+GS GTV R + + + H + V ++ RE+ I++ + HPN
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPN 95
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL------EGA--HIRQEHILSDLARQVLSGLAYLH 210
+V + + ++ EY+ GSL GA + + LS +A V G+ YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS-MAYDVAKGMNYLH 154
Query: 211 KRK--IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
R IVHRD+K NLL++ VK+ DFG+SR+ A A GT +M+PE + +
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASR 327
++ K D++S GV + E + P+ + A ++ A+ F + E P +
Sbjct: 215 PSNEK-----SDVYSFGVILWELATLQQPWG---NLNPAQVVAAVGFKCKRLEIPRNLNP 266
Query: 328 EFRDFISRCLQKDPHSR 344
+ I C +P R
Sbjct: 267 QVAAIIEGCWTNEPWKR 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I +++EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEG----AHIRQEHILSDLARQVLSGLA 207
NV+ D++ +E L+ ++ G L A + +H+ L Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHV-QFLIYQILRGLK 135
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 190
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 191 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 249 ESARNYIQSLAQ 260
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 24/261 (9%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGN------HEDSVRSQICREIEIL 151
P++ IG GS G V H +A+KV+ E + S+ R + +L
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE--RNV-LL 93
Query: 152 RDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGL 206
++V HP +V H + ++ +L+Y++GG L H+++E + A ++ S L
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL-FYHLQRERCFLEPRARFYAAEIASAL 152
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
YLH IV+RD+KP N+L++S ++ + DFG+ + + ++ GT Y++PE
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-- 210
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS 326
L+ YD D W LG + E G PF + M+ +P + +
Sbjct: 211 --LHKQPYDRTV-DWWCLGAVLYEMLYGLPPFYSRNTAE----MYDNILNKPLQLKPNIT 263
Query: 327 REFRDFISRCLQKDPHSRWPA 347
R + LQKD R A
Sbjct: 264 NSARHLLEGLLQKDRTKRLGA 284
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + IGSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 26 PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 144
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 199
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 200 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 258 ESARNYIQSLTQ 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + GN +E ++++ + H +V+ + +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAV 248
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 306
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG+ R++ A I + +PE +G++
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 361
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 362 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 414
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 415 MCQCWRKDPEER-PTFEYLQ 433
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKSQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG+ R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
+GSG+ G V V T A+K +Y + + ++ RE+ +L+ + H NV+ D+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 166 Y------DRNGEIEVLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLAYLHKRKIV 215
+ D + +++ +M G+ G ++ E + D L Q+L GL Y+H I+
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
HRD+KP NL +N +KI DFG++R Q V T Y +PE I LN +Y
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVI---LNWMRYT 204
Query: 276 GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE--------------- 320
DIWS+G + E G+ F D + + P E
Sbjct: 205 QTV-DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 321 -APEMASREFR-----------DFISRCLQKDPHSRWPAAQLLQHPFI 356
PE+ ++F + + + L D R A + L HP+
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 78
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSLEG---AHI-RQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL AH R +HI L Q+ G+ YL +
Sbjct: 79 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 192
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 193 TESKF-SVASDVWSFGVVLYELF 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 22/257 (8%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
R+G+G G VW + +++V + G SV++ E +++ + H +V+ +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQA-FLEEANLMKTLQHDKLVRLYA 75
Query: 165 MYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ R I ++ EYM GSL EG + ++ D + Q+ G+AY+ ++ +HR
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI-DFSAQIAEGMAYIERKNYIHR 134
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDG 276
D++ +N+L++ S KIADFG++R++ A I + +PE IN K
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK--- 191
Query: 277 YAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISR 335
D+WS G+ + E G+ P+ GR A +M A+ E E D +
Sbjct: 192 --SDVWSFGILLYEIVTYGKIPYP-GRTN--ADVMTALSQGYRMPRVENCPDELYDIMKM 246
Query: 336 CLQKDPHSRWPAAQLLQ 352
C ++ R P LQ
Sbjct: 247 CWKEKAEER-PTFDYLQ 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I +++EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 44/292 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G+ G V + + SR +A+K I H + S I E+ +L +NH VV+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 167 -------------DRNGEIEVLLEYMDGGSLEGAHIRQEHILSD------LARQVLSGLA 207
+ + + EY + +L I E++ L RQ+L L+
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDL-IHSENLNQQRDEYWRLFRQILEALS 130
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTM--------------DPCNSA 253
Y+H + I+HR++KP N+ I+ S+NVKI DFG+++ + +++ D SA
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG-DWASLMFA 312
+GT Y++ E ++ G Y+ D +SLG+ E +PF+ G + + + +
Sbjct: 191 IGTAXYVATEVLD---GTGHYNEKI-DXYSLGIIFFEXI---YPFSTGXERVNILKKLRS 243
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQV 364
+ PP+ + + + I + DP+ R A LL ++ Q +V
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEV 295
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKIRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 144
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 199
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 200 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 258 ESARNYIQSLTQ 269
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 141
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 196
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 197 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 255 ESARNYIQSLTQ 266
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 146
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIM-- 201
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 202 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 260 ESARNYIQSLTQ 271
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 146
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIM-- 201
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 202 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 260 ESARNYIQSLTQ 271
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 145
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 200
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 201 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 259 ESARNYIQSLTQ 270
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 146
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIM-- 201
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 202 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 260 ESARNYIQSLTQ 271
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 150
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 205
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 206 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 264 ESARNYIQSLTQ 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 70
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 71 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 128
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 183
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 236
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 237 MCQCWRKDPEER-PTFEYLQ 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 151
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 206
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 207 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 265 ESARNYIQSLTQ 276
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 71
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 72 VSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 129
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA----LYGRFT-I 184
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 185 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 237
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 238 MCQCWRKEPEER-PTFEYLQ 256
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 104 GNRIGSGSGGTVWR-VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
GN++G G G V++ V+ T V L + + ++ Q +EI+++ H N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
++ ++ YM GSL +G H+ +A+ +G+ +LH+ +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRI---LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRDIK +N+L++ + KI+DFG++R AQT+ + VGT AYM+PE + ++
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV-MXSRIVGTTAYMAPEALRGEITP- 213
Query: 273 KYDGYAGDIWSLGVSILEFYLG 294
DI+S GV +LE G
Sbjct: 214 -----KSDIYSFGVVLLEIITG 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 35/208 (16%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK---CH 163
IGSG G V++ H + + +K + N+E + R E++ L ++H N+V C
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER-----EVKALAKLDHVNIVHYNGCW 73
Query: 164 DMYDRNGEIE-------------VLLEYMDGGSLE-------GAHIRQEHILSDLARQVL 203
D +D + E + +E+ D G+LE G + + L +L Q+
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL-ELFEQIT 132
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPE 263
G+ Y+H +K+++RD+KPSN+ + +K VKI DFG+ L S GT+ YMSPE
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-GTLRYMSPE 191
Query: 264 RINTDLNHGKYDGYAGDIWSLGVSILEF 291
+I++ ++GK D+++LG+ + E
Sbjct: 192 QISSQ-DYGK----EVDLYALGLILAEL 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 158
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 213
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 214 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 272 ESARNYIQSLAQ 283
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 159
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 214
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 215 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 273 ESARNYIQSLAQ 284
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 106
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 107 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 220
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 221 TESKF-SVASDVWSFGVVLYELF 242
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNAMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 159
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXVATRWYRAPEIM-- 214
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 215 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 273 ESARNYIQSLAQ 284
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 135
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 190
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 191 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 249 ESARNYIQSLAQ 260
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 79
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 80 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 193
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 194 TESKF-SVASDVWSFGVVLYELF 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 145
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 200
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 201 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 259 ESARNYIQSLAQ 270
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 73
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 74 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 187
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 188 TESKF-SVASDVWSFGVVLYELF 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLAQ 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 72
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 73 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 130
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 185
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 238
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 239 MCQCWRKDPEER-PTFEYLQ 257
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 81
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 82 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 195
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 196 TESKF-SVASDVWSFGVVLYELF 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 162
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 217
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 218 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 276 ESARNYIQSLTQ 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 80
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 81 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 194
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 195 TESKF-SVASDVWSFGVVLYELF 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 74
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 75 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 188
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 189 TESKF-SVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 75
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 76 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 189
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 190 TESKF-SVASDVWSFGVVLYELF 211
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 146
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 201
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 202 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 260 ESARNYIQSLTQ 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I +++EYM G L G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 82
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 83 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 196
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 197 TESKF-SVASDVWSFGVVLYELF 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 135
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 190
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 191 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 249 ESARNYIQSLTQ 260
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 150
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 205
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 206 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 264 ESARNYIQSLTQ 275
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 136
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 191
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 192 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 250 ESARNYIQSLTQ 261
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 78
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 79 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 192
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 193 TESKF-SVASDVWSFGVVLYELF 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 136
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 191
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 192 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 250 ESARNYIQSLTQ 261
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC---REIEILR 152
I+ AEL IG G G V+R A+K + ++ + I +E ++
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGG----SLEGAHIRQEHILSDLARQVLSGLAY 208
+ HPN++ + + + +++E+ GG L G I + IL + A Q+ G+ Y
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD-ILVNWAVQIARGMNY 120
Query: 209 LHKRKIV---HRDIKPSNLLI--------NSSKNVKIADFGVSRILAQTMDPCNSAVGTI 257
LH IV HRD+K SN+LI S+K +KI DFG++R +T SA G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAY 178
Query: 258 AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF--AVGRQGDWASLMFAICF 315
A+M+PE I + D+WS GV + E G PF G + M +
Sbjct: 179 AWMAPEVIRASMF-----SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
Query: 316 AQPPEAPEMASREFRDFISRCLQKDPHSR 344
P PE F + C DPHSR
Sbjct: 234 PIPSTCPE----PFAKLMEDCWNPDPHSR 258
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 144
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 199
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 200 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 258 ESARNYIQSLTQ 269
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 20 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 138
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 139 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 193
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 194 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 251
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 252 ESARNYIQSLTQ 263
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 141
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 196
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 197 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 255 ESARNYIQSLTQ 266
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 144
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 199
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 200 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 258 ESARNYIQSLTQ 269
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 159
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 214
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 215 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 273 ESARNYIQSLTQ 284
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 145
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 200
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 201 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 259 ESARNYIQSLTQ 270
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 19 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 137
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 138 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 192
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 193 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 250
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 251 ESARNYIQSLTQ 262
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 75
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 76 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 189
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 190 TESKF-SVASDVWSFGVVLYELF 211
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 158
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 213
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 214 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 272 ESARNYIQSLTQ 283
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 151
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 206
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 207 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 265 ESARNYIQSLTQ 276
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 151
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 206
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 207 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 265 ESARNYIQSLTQ 276
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 104 GNRIGSGSGGTVWR-VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
GN++G G G V++ V+ T V L + + ++ Q +EI+++ H N+V+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
++ ++ YM GSL +G H+ +A+ +G+ +LH+ +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRI---LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRDIK +N+L++ + KI+DFG++R AQT+ VGT AYM+PE + ++
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV-MXXRIVGTTAYMAPEALRGEITP- 213
Query: 273 KYDGYAGDIWSLGVSILEFYLG 294
DI+S GV +LE G
Sbjct: 214 -----KSDIYSFGVVLLEIITG 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 141
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 196
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 197 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 255 ESARNYIQSLTQ 266
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 30/206 (14%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 75
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 76 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ------TMDPCNSAVGTIAYMSPERIN 266
+ +HRD+ N+L+ + VKI DFG++++L Q +P S I + +PE
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP---IFWYAPE--- 187
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFY 292
L K+ A D+WS GV + E +
Sbjct: 188 -SLTESKF-SVASDVWSFGVVLYELF 211
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 141
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 196
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 197 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 255 ESARNYIQSLTQ 266
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 145
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 200
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 201 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 259 ESARNYIQSLTQ 270
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 93
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 94 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 207
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 208 TESKF-SVASDVWSFGVVLYELF 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 56/303 (18%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPN 158
Q+ IGSG+ G V A+K + + N + R+ RE+ +L+ VNH N
Sbjct: 25 QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKN 82
Query: 159 VVKCHDMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHK 211
++ +++ +E +++E MD + H+ +H +S L Q+L G+ +LH
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS 142
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I+HRD+KPSN+++ S +KI DFG++R A T V T Y +PE I L
Sbjct: 143 AGIIHRDLKPSNIVVKSDCTLKILDFGLART-ASTNFMMTPYVVTRYYRAPEVI---LGM 198
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD-W-----------ASLMFAI------ 313
G + DIWS+G + E G F D W A M A+
Sbjct: 199 GYKENV--DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 256
Query: 314 --------------------CFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
F E ++ + + RD +S+ L DP R + L+H
Sbjct: 257 YVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 316
Query: 354 PFI 356
P+I
Sbjct: 317 PYI 319
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSLEGAHIRQEHILSD 197
RE + +NHP +V +D GE E +++EY+DG +L + +
Sbjct: 61 REAQNAAALNHPAIVAVYD----TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 198 LARQVLS----GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCN-- 251
A +V++ L + H+ I+HRD+KP+N++I+++ VK+ DFG++R +A + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 252 -SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM 310
+ +GT Y+SPE+ D + D++SLG + E G PF G D +
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF-TGDSPDSVAYQ 230
Query: 311 FAICFAQPPEA-PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
PP A E S + + + L K+P +R+ A ++ +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 93
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 94 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 207
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 208 TESKF-SVASDVWSFGVVLYELF 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKXVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 74
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 75 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 132
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 187
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 240
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 241 MCQCWRKEPEER-PTFEYLQ 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 31 PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 149
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 150 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 204
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 205 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 262
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 263 ESARNYIQSLAQ 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 135
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEIM-- 190
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 191 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 249 ESARNYIQSLAQ 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++N +L G +IG G+ G V+ + + A+K ++++ +E IL+
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
+HPN+V+ + + I +++E + GG EGA +R + +L + +G+ Y
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL-QMVGDAAAGMEY 228
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT-----IAYMSPE 263
L + +HRD+ N L+ +KI+DFG+SR + D +A G + + +PE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPE 285
Query: 264 RINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
LN+G+Y + D+WS G+ + E F LG P+
Sbjct: 286 ----ALNYGRYSSES-DVWSFGILLWETFSLGASPY 316
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLAQ 264
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
+ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 35/280 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G +E ++++ + H +V+ + +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAV 330
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 331 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 388
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 443
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 496
Query: 333 ISRCLQKDPHSRWPAAQLLQ----HPFILRAGQSQVNQNL 368
+ +C +K+P R P + LQ F Q Q +NL
Sbjct: 497 MCQCWRKEPEER-PTFEYLQAFLEDYFTSTEPQXQPGENL 535
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P LQ +GSG+ G+V + A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA---HIRQEHILSD-----LARQVLSGLAY 208
NV+ D++ IE E +L GA +I + LSD L Q+L GL Y
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
+H I+HRD+KPSN+ +N ++I DFG++R Q + V T Y +PE +
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIM--- 200
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
LN Y+ DIWS+G + E G+ F D + + PE S E
Sbjct: 201 LNWMHYNQTV-DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 329 --------------------FR-------DFISRCLQKDPHSRWPAAQLLQHPFI 356
FR D + R L D R AA+ L H +
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 162
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYVATRWYRAPEIM-- 217
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 218 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 276 ESARNYIQSLTQ 287
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV 154
++N +L G +IG G+ G V+ + + A+K ++++ +E IL+
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
+HPN+V+ + + I +++E + GG EGA +R + +L + +G+ Y
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL-QMVGDAAAGMEY 228
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT-----IAYMSPE 263
L + +HRD+ N L+ +KI+DFG+SR + D +A G + + +PE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPE 285
Query: 264 RINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
LN+G+Y + D+WS G+ + E F LG P+
Sbjct: 286 ----ALNYGRYSSES-DVWSFGILLWETFSLGASPY 316
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 24/203 (11%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 78
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++E++ GSL + R +HI L Q+ G+ YL +
Sbjct: 79 YKGVCYSAGRRN--LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS---AVGTIAYMSPERINTDL 269
+ +HRD+ N+L+ + VKI DFG++++L Q + I + +PE L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE----SL 192
Query: 270 NHGKYDGYAGDIWSLGVSILEFY 292
K+ A D+WS GV + E +
Sbjct: 193 TESKF-SVASDVWSFGVVLYELF 214
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI D+G++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 125/289 (43%), Gaps = 45/289 (15%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 167 DRNGEIE-----VLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
R IE L+ ++ G L + H+ +HI L Q+L GL Y+H ++HR
Sbjct: 111 -RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHR 168
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKY 274
D+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 169 DLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGY 225
Query: 275 DGYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FA 312
+ DIWS+G + E YL + +G Q D ++ +
Sbjct: 226 TK-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 284
Query: 313 ICFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ + P A + D + + L +PH R Q L HP++
Sbjct: 285 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV A+K + +E ++++ + H +V+ + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM+ GSL G ++R ++ D++ Q+ SG+AY+ + VHRD
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-DMSAQIASGMAYVERMNYVHRD 136
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 191
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 244
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 245 MCQCWRKEPEER-PTFEYLQ 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G +E ++++ + H +V+ + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAV 247
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 305
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 360
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 413
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 414 MCQCWRKEPEER-PTFEYLQ 432
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G +E ++++ + H +V+ + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAV 247
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 305
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 360
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 413
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 414 MCQCWRKEPEER-PTFEYLQ 432
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 81
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM G L G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 82 VSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 139
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 194
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 247
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +KDP R P + LQ
Sbjct: 248 MCQCWRKDPEER-PTFEYLQ 266
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+GV + E G F V +
Sbjct: 206 V--DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 32 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 89
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 90 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 148
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 209 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 266
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 267 KAMKRLMAECLKKKRDER 284
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 49/295 (16%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKCHD 164
IG+G+ G V T + A+K I N D V + + RE++IL+ H N++ D
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 165 M------YDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKI 214
+ Y + V+L+ M+ + H Q EH+ L Q+L GL Y+H ++
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMHSAQV 179
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPCNSAVGTIAYMSPERINTDLN 270
+HRD+KPSNLL+N + +KI DFG++R L A+ V T Y +PE + L+
Sbjct: 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM---LS 236
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGR--FP------------FAVGR------QGDWASLM 310
+Y A D+WS+G E R FP +G Q A +
Sbjct: 237 LHEYTQ-AIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILR 358
A + PP P A R+ + R L+ +P +R AA L+HPF+ +
Sbjct: 296 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 90
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 91 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 210 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 268 KAMKRLMAECLKKKRDER 285
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 82
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 142
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 143 RDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 198
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 199 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 150 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 206
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 207 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLL 265
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 266 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ G RIGSGS GTV++ V L V + E+ +LR H N
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVN 65
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH +
Sbjct: 66 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNH 271
I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ-DK 183
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS--REF 329
Y + D+++ G+ + E G+ P++ D M + P + ++ +
Sbjct: 184 NPYS-FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 330 RDFISRCLQKDPHSR 344
+ ++ CL+K R
Sbjct: 243 KRLMAECLKKKRDER 257
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 150 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 206
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 207 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 265
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 266 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 130/305 (42%), Gaps = 60/305 (19%)
Query: 102 QKGNRIGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPN 158
Q+ IGSG+ G V A+K + + N + R+ RE+ +L+ VNH N
Sbjct: 27 QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKN 84
Query: 159 VVKCHDMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHK 211
++ +++ +E +++E MD + H+ +H +S L Q+L G+ +LH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS 144
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I+HRD+KPSN+++ S +KI DFG++R A T V T Y +PE I
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVILG---- 199
Query: 272 GKYDGYAG--DIWSLGVSILEFYLGRFPFAVGRQGD-W-----------ASLMFAI---- 313
GYA DIWS+G + E G F D W A M A+
Sbjct: 200 ---MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 314 ----------------------CFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLL 351
F E ++ + + RD +S+ L DP R + L
Sbjct: 257 RNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEAL 316
Query: 352 QHPFI 356
+HP+I
Sbjct: 317 RHPYI 321
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ G RIGSGS GTV++ V L V + E+ +LR H N
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVN 67
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH +
Sbjct: 68 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNH 271
I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ-DK 185
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS--REF 329
Y + D+++ G+ + E G+ P++ D M + P + ++ +
Sbjct: 186 NPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 330 RDFISRCLQKDPHSR 344
+ ++ CL+K R
Sbjct: 245 KRLMAECLKKKRDER 259
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 10 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 67
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 68 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 187 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 244
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 245 KAMKRLMAECLKKKRDER 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G Q E ++++ + H +V+ + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLYAV 78
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM+ GSL G ++R ++ D++ Q+ SG+AY+ + VHRD
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-DMSAQIASGMAYVERMNYVHRD 136
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQT-MDPCNSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAA----LYGRFT-I 191
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 244
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 245 MCQCWRKEPEER-PTFEYLQ 263
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 150 LKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 206
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 207 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLL 265
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 266 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+GV + E G F V +
Sbjct: 206 V--DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIEILRDVN 155
+ Q +G+GS G V + R +A+KV+ E VR E +L V
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL--KKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLAR----QVLSGLAYLHK 211
HP +++ + +I ++++Y++GG L + + + +A+ +V L YLH
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
+ I++RD+KP N+L++ + ++KI DFG ++ + D GT Y++PE ++T
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP---DVTYXLCGTPDYIAPEVVST---- 177
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K + D WS G+ I E G PF + PP + + +D
Sbjct: 178 -KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKD 232
Query: 332 FISRCLQKDPHSR 344
+SR + +D R
Sbjct: 233 LLSRLITRDLSQR 245
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ G RIGSGS GTV++ V L V + E+ +LR H N
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVN 70
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH +
Sbjct: 71 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNH 271
I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ-DK 188
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS--REF 329
Y + D+++ G+ + E G+ P++ D M + P + ++ +
Sbjct: 189 NPYS-FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 330 RDFISRCLQKDPHSR 344
+ ++ CL+K R
Sbjct: 248 KRLMAECLKKKRDER 262
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 88
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 148
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 149 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 204
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 205 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 262
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 263 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 90
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 206
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 207 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 90
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 206
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 207 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 127
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 187
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 243
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 244 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCH 163
+GSG+ G+V + + A+K + + + ++ RE+ +L+ + H NV+
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 164 DMYD-----RNG-EIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
D++ RN + +++ +M D + G +E I L Q+L GL Y+H +V
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKI-QYLVYQMLKGLKYIHSAGVV 166
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
HRD+KP NL +N +KI DFG++R M V T Y +PE I + +++ +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSWMHYNQ-- 221
Query: 276 GYAGDIWSLGVSILEFYLGRFPFA----------------------VGRQGDWASLMFAI 313
DIWS+G + E G+ F V + D A+ +
Sbjct: 222 --TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 279
Query: 314 CFAQPPEAPEM-----ASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
Q P AS + D + + L+ D R AAQ L HPF
Sbjct: 280 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 47/297 (15%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V + A+K + + + ++ RE+ +L+ + H
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 168
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DFG++R T D V T Y +PE +
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPEIM-- 223
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA------ 321
LN Y+ DIWS+G + E GR F + + + PP +
Sbjct: 224 -LNWMHYN-MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT-GTPPASVISRMP 280
Query: 322 -----------PEMASREFR-----------DFISRCLQKDPHSRWPAAQLLQHPFI 356
P+M R F D + + L D R A++ L HP+
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 49/295 (16%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRS--QICREIEILRDVNHPNVVKCHD 164
IG+G+ G V T + A+K I N D V + + RE++IL+ H N++ D
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 165 M------YDRNGEIEVLLEYMDGGSLEGAHIRQ----EHILSDLARQVLSGLAYLHKRKI 214
+ Y + V+L+ M+ + H Q EH+ L Q+L GL Y+H ++
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMHSAQV 180
Query: 215 VHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPCNSAVGTIAYMSPERINTDLN 270
+HRD+KPSNLL+N + +KI DFG++R L A+ V T Y +PE + L+
Sbjct: 181 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM---LS 237
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGR--FP------------FAVGR------QGDWASLM 310
+Y A D+WS+G E R FP +G Q A +
Sbjct: 238 LHEYTQ-AIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 296
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILR 358
A + PP P A R+ + R L+ +P +R AA L+HPF+ +
Sbjct: 297 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 206 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
++ G RIGSGS GTV++ V L V + E+ +LR H N
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVN 65
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLHKRK 213
++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH +
Sbjct: 66 ILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTDLNH 271
I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ-DK 183
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS--REF 329
Y + D+++ G+ + E G+ P++ D M + P + ++ +
Sbjct: 184 NPYS-FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 330 RDFISRCLQKDPHSR 344
+ ++ CL+K R
Sbjct: 243 KRLMAECLKKKRDER 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 82
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 142
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 198
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 199 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P LQ +GSG+ G+V + A+K + + + ++ RE+ +L+ + H
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA---HIRQEHILSD-----LARQVLSGLAY 208
NV+ D++ IE E +L GA +I + LSD L Q+L GL Y
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
+H I+HRD+KPSN+ +N ++I DFG++R Q + V T Y +PE +
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIM--- 200
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
LN Y+ DIWS+G + E G+ F D + + PE S E
Sbjct: 201 LNWMHYNQTV-DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 329 --------------------FR-------DFISRCLQKDPHSRWPAAQLLQHPFI 356
FR D + R L D R AA+ L H +
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 83
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 199
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 200 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEH--------I 194
E++I+ D+ + + C + E+ ++ EYM+ S+ E + ++ +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 195 LSDLARQVLSGLAYLHKRK-IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSA 253
+ + + VL+ +Y+H K I HRD+KPSN+L++ + VK++DFG S + +
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK--KIKGS 210
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFA-------------- 299
GT +M PE + N Y+G DIWSLG+ + + PF+
Sbjct: 211 RGTYEFMPPEFFS---NESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267
Query: 300 --VGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFIL 357
+ D ++ + + + S E DF+ L+K+P R + L+H ++
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327
Query: 358 RAGQSQVNQNLRQILPPPRPL 378
+ + +++ + L
Sbjct: 328 DTNIEDLREFSKELYKKRKKL 348
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 83
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 199
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 200 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 151
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 152 LKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 208
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVGRQG-----------DWASLMFAI 313
+ DIWS+G + E YL + +G G + + + +
Sbjct: 209 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLL 267
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 268 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLL 127
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 187
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 243
Query: 277 YAGDIWSLGVSILEF-----------YLGRFPFAVGRQG--------------------- 304
DIWS+G + E Y+ ++ + + G
Sbjct: 244 V--DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 305 -DWASLMFAICFAQP-----PEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A L F F E ++ + + RD +S+ L DP R LQHP+I
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 147
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 204
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 205 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLL 263
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 264 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 30/206 (14%)
Query: 106 RIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
++G G+ G+V + P T V A+K + + E+ +R REIEIL+ + H N+VK
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 76
Query: 162 ----CHDMYDRNGEIEVLLEYMDGGSL----EGAHIRQEHI-LSDLARQVLSGLAYLHKR 212
C+ RN +++++EY+ GSL + R +HI L Q+ G+ YL +
Sbjct: 77 YKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ------TMDPCNSAVGTIAYMSPERIN 266
+ +HR++ N+L+ + VKI DFG++++L Q +P S I + +PE
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP---IFWYAPE--- 188
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFY 292
L K+ A D+WS GV + E +
Sbjct: 189 -SLTESKF-SVASDVWSFGVVLYELF 212
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 206
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 207 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 265
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 266 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 169
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 170 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 226
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 227 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 285
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 286 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 151
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 208
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 209 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 267
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 268 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 104 GNRIGSGSGGTVWR-VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
GN++G G G V++ V+ T V L + + ++ Q +EI+++ H N+V+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
++ ++ YM GSL +G H+ +A+ +G+ +LH+ +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRI---LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRDIK +N+L++ + KI+DFG++R AQ + VGT AYM+PE + ++
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXV-MXXRIVGTTAYMAPEALRGEITP- 207
Query: 273 KYDGYAGDIWSLGVSILEFYLG 294
DI+S GV +LE G
Sbjct: 208 -----KSDIYSFGVVLLEIITG 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 151
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 208
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 209 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 267
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 268 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 154
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 211
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 212 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 270
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 271 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 155
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 156 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 212
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 213 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 271
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 272 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 146
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 147 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 203
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 204 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 262
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 263 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 157
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 158 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 214
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 215 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 273
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 274 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 206
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 207 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 265
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 266 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 154
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCN---SAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM---LNSKGYT 211
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 212 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 270
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 271 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 147
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 204
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 205 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 263
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 264 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ ++G+G G VW + ++V + G+ SV + + E +++ + H +V
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLA-EANVMKTLQHDKLV 73
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
K H + + I ++ E+M GSL EG+ ++ D + Q+ G+A++ +R
Sbjct: 74 KLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQIAEGMAFIEQRN 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L+++S KIADFG++R++ A I + +PE I N G
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI----NFG 187
Query: 273 KYDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
+ D+WS G+ ++E GR P+ G + P PE E +
Sbjct: 188 SFT-IKSDVWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERGYRMP--RPENCPEELYN 243
Query: 332 FISRCLQKDPHSRWPAAQLLQ 352
+ RC + P R P + +Q
Sbjct: 244 IMMRCWKNRPEER-PTFEYIQ 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 31/260 (11%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
++G G G VW T+RV + G +E ++++ + H +V+ + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAV 247
Query: 166 YDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
I ++ EYM GSL G ++R ++ D+A Q+ SG+AY+ + VHRD
Sbjct: 248 VSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRD 305
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDGY 277
++ +N+L+ + K+ADFG++R++ A I + +PE +G++
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA----LYGRFT-I 360
Query: 278 AGDIWSLGVSILEFYL-GRFPF--AVGRQG-DWASLMFAI-CFAQPPEAPEMASREFRDF 332
D+WS G+ + E GR P+ V R+ D + + C PPE PE D
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---PPECPE----SLHDL 413
Query: 333 ISRCLQKDPHSRWPAAQLLQ 352
+ +C +K+P R P + LQ
Sbjct: 414 MCQCWRKEPEER-PTFEYLQ 432
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCH 163
+GSG+ G+V + + A+K + + + ++ RE+ +L+ + H NV+
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 164 DMYD-----RNG-EIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
D++ RN + +++ +M D + G +E I L Q+L GL Y+H +V
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKI-QYLVYQMLKGLKYIHSAGVV 148
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
HRD+KP NL +N +KI DFG++R M V T Y +PE I + +++ +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSWMHYNQ-- 203
Query: 276 GYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAIC------FAQP----------- 318
DIWS+G + E G+ F D + + + F Q
Sbjct: 204 --TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 261
Query: 319 --PEAPEM--------ASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
P+ P AS + D + + L+ D R AAQ L HPF
Sbjct: 262 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 33/268 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHED-----SVRSQICREIEILRDVNHPNVVK 161
IG GS TV++ + T+ ++V + +D S R + E E L+ + HPN+V+
Sbjct: 34 IGRGSFKTVYKGLDTETT----VEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 162 CHDMYDRNGE----IEVLLEYMDGGSLEGA----HIRQEHILSDLARQVLSGLAYLHKRK 213
+D ++ + I ++ E G+L+ + + +L RQ+L GL +LH R
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 214 --IVHRDIKPSNLLINS-SKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLN 270
I+HRD+K N+ I + +VKI D G++ + + + +GT + +PE
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFXAPEXYEE--- 204
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMF--AICFAQPPEAPEMASRE 328
KYD + D+++ G LE +P++ + A+ ++ +P ++A E
Sbjct: 205 --KYDE-SVDVYAFGXCXLEXATSEYPYSECQN---AAQIYRRVTSGVKPASFDKVAIPE 258
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ I C++++ R+ LL H F
Sbjct: 259 VKEIIEGCIRQNKDERYSIKDLLNHAFF 286
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A+K I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 48/221 (21%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK---CH 163
IGSG G V++ H + + ++ + N+E + R E++ L ++H N+V C
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER-----EVKALAKLDHVNIVHYNGCW 74
Query: 164 DMYDRNGEIE--------------------------VLLEYMDGGSLE-------GAHIR 190
D +D + E + +E+ D G+LE G +
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 191 QEHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
+ L +L Q+ G+ Y+H +K++HRD+KPSN+ + +K VKI DFG+ L
Sbjct: 135 KVLAL-ELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 193
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
S GT+ YMSPE+I++ ++GK D+++LG+ + E
Sbjct: 194 RSK-GTLRYMSPEQISSQ-DYGK----EVDLYALGLILAEL 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 140/327 (42%), Gaps = 86/327 (26%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVN-HPNVVKCH 163
++G G+ G VW+ + T V A+K I+ ++S +Q REI IL +++ H N+V
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 164 DMY--DRNGEIEVLLEYM--DGGSLEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDI 219
++ D + ++ ++ +YM D ++ A+I + + Q++ + YLH ++HRD+
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDM 135
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSA---------------------VGTIA 258
KPSN+L+N+ +VK+ADFG+SR N+ V T
Sbjct: 136 KPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGR----------------------- 295
Y +PE + L KY D+WSLG + E G+
Sbjct: 196 YRAPEIL---LGSTKYTK-GIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPS 251
Query: 296 --------FPFAVG-----------RQGD-------WASLMFAICFAQPPEAPEMASREF 329
PFA RQ + W +L+ I P+A + E
Sbjct: 252 NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI----NPKAD--CNEEA 305
Query: 330 RDFISRCLQKDPHSRWPAAQLLQHPFI 356
D + + LQ +P+ R A L+HPF+
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI DF ++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P LQ +GSG+ G+V + A+K + + + ++ RE+ +L+ + H
Sbjct: 19 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 78
Query: 157 PNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA---HIRQEHILSD-----LARQVLSGLAY 208
NV+ D++ IE E +L GA +I + LSD L Q+L GL Y
Sbjct: 79 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
+H I+HRD+KPSN+ +N ++I DFG++R Q + V T Y +PE +
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIM--- 192
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASRE 328
LN Y+ DIWS+G + E G+ F D + + PE S E
Sbjct: 193 LNWMHYNQTV-DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 251
Query: 329 --------------------FR-------DFISRCLQKDPHSRWPAAQLLQHPFI 356
FR D + R L D R AA+ L H +
Sbjct: 252 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 60/300 (20%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQT--MDPCNSAVGTIAYMSPERINTDLNHGKY 274
RD+KPSN+++ S +KI DFG++R + M+P V T Y +PE I L G
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---EVVTRYYRAPEVI---LGMGYK 203
Query: 275 DGYAGDIWSLGVSILEFYLGRFPF---------------------------------AVG 301
+ DIWS+G + E + F V
Sbjct: 204 ENV--DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVE 261
Query: 302 RQGDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ +A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI FG++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSLEGAHIRQEHILSD 197
RE + +NHP +V +D GE E +++EY+DG +L + +
Sbjct: 61 REAQNAAALNHPAIVAVYD----TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 198 LARQVLS----GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA---QTMDPC 250
A +V++ L + H+ I+HRD+KP+N+LI+++ VK+ DFG++R +A ++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM 310
+ +GT Y+SPE+ D + D++SLG + E G PF GD
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF----TGDSP--- 224
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ + E P E S + + + L K+P +R+ A ++ +
Sbjct: 225 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 33/277 (11%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ ++G+G G VW + ++V + G+ SV + + E +++ + H +V
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLA-EANVMKTLQHDKLV 240
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
K H + + I ++ E+M GSL EG+ ++ D + Q+ G+A++ +R
Sbjct: 241 KLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQIAEGMAFIEQRN 298
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
+HRD++ +N+L+++S KIADFG++R+ A+ I + +PE I N G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKF---------PIKWTAPEAI----NFGS 345
Query: 274 YDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
+ D+WS G+ ++E GR P+ G + P PE E +
Sbjct: 346 FT-IKSDVWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERGYRMP--RPENCPEELYNI 401
Query: 333 ISRCLQKDPHSRWPAAQLLQHPF--ILRAGQSQVNQN 367
+ RC + P R P + +Q A +SQ Q
Sbjct: 402 MMRCWKNRPEER-PTFEYIQSVLDDFYTATESQXQQQ 437
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 29/286 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G GS G V T ++A+K++ + +D V + + + P + + H
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + ++EY++GG L HI+Q + A ++ GL +LHKR I++RD
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLM-YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNS--AVGTIAYMSPERINTDLNHGKYDG 276
+K N++++S ++KIADFG+ + MD + GT Y++PE I + Y G
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEII----AYQPY-G 198
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
+ D W+ GV + E G+ PF G+ +F P+ S+E
Sbjct: 199 KSVDWWAYGVLLYEMLAGQPPF----DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGL 254
Query: 337 LQKDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRP 377
+ K P R + +H F R ++ R+I PP +P
Sbjct: 255 MTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLEN--REIQPPFKP 298
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 63/334 (18%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHP 157
++ +K +IG G+ G V++ H T + ALK V+ N ++ REI+IL+ + H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 158 NVVKCHDM-------YDR-NGEIEVLLEYMD---GGSLEGAHIRQEHILSDLAR---QVL 203
NVV ++ Y+R G I ++ ++ + G L ++ LS++ R +L
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLL 134
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRI--LAQTMDP--CNSAVGTIAY 259
+GL Y+H+ KI+HRD+K +N+LI +K+ADFG++R LA+ P + V T+ Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQP 318
PE + + ++G D+W G + E + R P G + +L+ +C +
Sbjct: 195 RPPELLLGERDYGP----PIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 319 PEA-PEMASREFR---------------------------DFISRCLQKDPHSRWPAAQL 350
PE P + + E D I + L DP R +
Sbjct: 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309
Query: 351 LQHPFI--------LRAGQSQVNQNLRQILPPPR 376
L H F L+ S ++ + L PPR
Sbjct: 310 LNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPR 343
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI D G++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 63/334 (18%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHP 157
++ +K +IG G+ G V++ H T + ALK V+ N ++ REI+IL+ + H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 158 NVVKCHDM-------YDR-NGEIEVLLEYMD---GGSLEGAHIRQEHILSDLAR---QVL 203
NVV ++ Y+R G I ++ ++ + G L ++ LS++ R +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLL 135
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRI--LAQTMDP--CNSAVGTIAY 259
+GL Y+H+ KI+HRD+K +N+LI +K+ADFG++R LA+ P + V T+ Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQP 318
PE + + ++G D+W G + E + R P G + +L+ +C +
Sbjct: 196 RPPELLLGERDYGP----PIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 319 PEA-PEMASREFR---------------------------DFISRCLQKDPHSRWPAAQL 350
PE P + + E D I + L DP R +
Sbjct: 251 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 310
Query: 351 LQHPFI--------LRAGQSQVNQNLRQILPPPR 376
L H F L+ S ++ + L PPR
Sbjct: 311 LNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPR 344
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI----NYG 185
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG G+ G V A++ I + + REI+IL H N++ +D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 167 -----DRNGEIEVLLEYMDGGS---LEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRD 218
++ ++ ++ + M+ L+ H+ +HI L Q+L GL Y+H ++HRD
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSANVLHRD 153
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGKYD 275
+KPSNLL+N++ ++KI DFG++R+ D V T Y +PE + LN Y
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM---LNSKGYT 210
Query: 276 GYAGDIWSLGVSILEF-----------YLGRFPFAVG-----RQGDWASLM------FAI 313
+ DIWS+G + E YL + +G Q D ++ + +
Sbjct: 211 K-SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 314 CFAQPPEAP-----EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ P A + D + + L +PH R Q L HP++
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 90
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 206
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 207 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 264
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 265 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ ++G+G G VW + ++V + G+ SV + + E +++ + H +V
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLA-EANVMKTLQHDKLV 246
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
K H + + I ++ E+M GSL EG+ ++ D + Q+ G+A++ +R
Sbjct: 247 KLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQIAEGMAFIEQRN 304
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L+++S KIADFG++R++ A I + +PE I N G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI----NFG 360
Query: 273 KYDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
+ D+WS G+ ++E GR P+ G + P PE E +
Sbjct: 361 SFT-IKSDVWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERGYRMP--RPENCPEELYN 416
Query: 332 FISRCLQKDPHSRWPAAQLLQ 352
+ RC + P R P + +Q
Sbjct: 417 IMMRCWKNRPEER-PTFEYIQ 436
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPEVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E + + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSLEGAHIRQEHILSD 197
RE + +NHP +V +D GE E +++EY+DG +L + +
Sbjct: 61 REAQNAAALNHPAIVAVYD----TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 198 LARQVLS----GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCN-- 251
A +V++ L + H+ I+HRD+KP+N++I+++ VK+ DFG++R +A + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 252 -SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM 310
+ +GT Y+SPE+ D + D++SLG + E G PF GD
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF----TGDSP--- 224
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ + E P E S + + + L K+P +R+ A ++ +
Sbjct: 225 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSLEGAHIRQEHILSD 197
RE + +NHP +V +D GE E +++EY+DG +L + +
Sbjct: 61 REAQNAAALNHPAIVAVYD----TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 198 LARQVLS----GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCN-- 251
A +V++ L + H+ I+HRD+KP+N++I+++ VK+ DFG++R +A + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 252 -SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM 310
+ +GT Y+SPE+ D + D++SLG + E G PF GD
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF----TGDSP--- 224
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ + E P E S + + + L K+P +R+ A ++ +
Sbjct: 225 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 25 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 82
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 83 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 141
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ ++ G+I +M+PE I
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 202 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 259
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 260 KAMKRLMAECLKKKRDER 277
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTS----RVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+K +G G G V + PT+ + A+K + +RS REIEILR + H
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 157 PNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILSDL---ARQVLSGLAYLHK 211
++VK + GE +++++EY+ GSL R L+ L A+Q+ G+AYLH
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTD 268
+ +HR + N+L+++ + VKI DFG+++ + + + + + +PE
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE----C 185
Query: 269 LNHGKYDGYAGDIWSLGVSILEF 291
L K+ YA D+WS GV++ E
Sbjct: 186 LKECKF-YYASDVWSFGVTLYEL 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 62
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 63 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ ++ G+I +M+PE I
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 182 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 240 KAMKRLMAECLKKKRDER 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSLEGAHIRQEHILSD 197
RE + +NHP +V +D GE E +++EY+DG +L + +
Sbjct: 78 REAQNAAALNHPAIVAVYD----TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 133
Query: 198 LARQVLS----GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCN-- 251
A +V++ L + H+ I+HRD+KP+N++I+++ VK+ DFG++R +A + +
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 252 -SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLM 310
+ +GT Y+SPE+ D + D++SLG + E G PF GD
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF----TGDSP--- 241
Query: 311 FAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ + E P E S + + + L K+P +R+ A ++ +
Sbjct: 242 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 294
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI D G++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 20/198 (10%)
Query: 107 IGSGSGGTVW--RVVHPPTSRVF-ALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V + P +F A+K + + + R E I+ +HPNV+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ ++ + ++ E+M+ GSL+ + +RQ L + R + +G+ YL VHR
Sbjct: 101 GVVTKSTPVMIITEFMENGSLD-SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR 159
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILA-QTMDPC-NSAVGT---IAYMSPERINTDLNHG 272
D+ N+L+NS+ K++DFG+SR L T DP SA+G I + +PE I +
Sbjct: 160 DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI----QYR 215
Query: 273 KYDGYAGDIWSLGVSILE 290
K+ A D+WS G+ + E
Sbjct: 216 KFTS-ASDVWSYGIVMWE 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTS----RVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+K +G G G V + PT+ + A+K + +RS REIEILR + H
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 157 PNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILSDL---ARQVLSGLAYLHK 211
++VK + GE +++++EY+ GSL R L+ L A+Q+ G+AYLH
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTD 268
+ +HR + N+L+++ + VKI DFG+++ + + + + + +PE
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE----C 186
Query: 269 LNHGKYDGYAGDIWSLGVSILEF 291
L K+ YA D+WS GV++ E
Sbjct: 187 LKECKF-YYASDVWSFGVTLYEL 208
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 60/300 (20%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQT--MDPCNSAVGTIAYMSPERINTDLNHGKY 274
RD+KPSN+++ S +KI DFG++R + M+P V T Y +PE I L G
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---EVVTRYYRAPEVI---LGMGYK 203
Query: 275 DGYAGDIWSLGVSILEFYLGRFPF---------------------------------AVG 301
+ D+WS+G + E + F V
Sbjct: 204 ENV--DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 302 RQGDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ +A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 26/259 (10%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
++G+G G VW + +++V + G SV++ E +++ + H +V+ +
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQA-FLEEANLMKTLQHDKLVRLYA 74
Query: 165 MYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + I ++ E+M GSL EG + ++ D + Q+ G+AY+ ++ +HR
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI-DFSAQIAEGMAYIERKNYIHR 133
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDG 276
D++ +N+L++ S KIADFG++R++ A I + +PE IN K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK--- 190
Query: 277 YAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS--REFRDFI 333
++WS G+ + E G+ P+ GR A +M A+ +Q P M + E D +
Sbjct: 191 --SNVWSFGILLYEIVTYGKIPYP-GRTN--ADVMSAL--SQGYRMPRMENCPDELYDIM 243
Query: 334 SRCLQKDPHSRWPAAQLLQ 352
C ++ R P LQ
Sbjct: 244 KMCWKEKAEER-PTFDYLQ 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 90
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL HI + L D+ARQ G+ YLH
Sbjct: 91 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ ++ G+I +M+PE I
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMAS-- 326
+ Y + D+++ G+ + E G+ P++ D M + P + ++
Sbjct: 210 -DKNPY-SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 327 REFRDFISRCLQKDPHSR 344
+ + ++ CL+K R
Sbjct: 268 KAMKRLMAECLKKKRDER 285
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P Q + +GSG+ G+V T A+K + + + ++ RE+ +L+ + H
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 157 PNVVKCHDMYDRNGEIE-----VLLEYMDGGSLEGAHIRQEHILSD----LARQVLSGLA 207
NV+ D++ +E L+ ++ G L ++ + + D L Q+L GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLK 139
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINT 267
Y+H I+HRD+KPSNL +N +KI D G++R T D V T Y +PE +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYVATRWYRAPEIM-- 194
Query: 268 DLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE-APEMAS 326
LN Y+ DIWS+G + E GR F D L+ + E +++S
Sbjct: 195 -LNWMHYNQTV-DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 327 REFRDFISRCLQ 338
R++I Q
Sbjct: 253 ESARNYIQSLTQ 264
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 27/243 (11%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHP 157
++ +K +IG G+ G V++ H T + ALK V+ N ++ REI+IL+ + H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 158 NVVKCHDM-------YDR-NGEIEVLLEYMD---GGSLEGAHIRQEHILSDLAR---QVL 203
NVV ++ Y+R G I ++ ++ + G L ++ LS++ R +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLL 135
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRI--LAQTMDP--CNSAVGTIAY 259
+GL Y+H+ KI+HRD+K +N+LI +K+ADFG++R LA+ P + V T+ Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQP 318
PE + + ++G D+W G + E + R P G + +L+ +C +
Sbjct: 196 RPPELLLGERDYGP----PIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 319 PEA 321
PE
Sbjct: 251 PEV 253
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHP 157
++ +++G G G V+ V S A+K + ED++ + +E +++++ HP
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHP 74
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLH 210
N+V+ + R +++E+M G+L ++R+ + +L +A Q+ S + YL
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINT 267
K+ +HRD+ N L+ + VK+ADFG+SR++ T D + G I + +PE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE---- 187
Query: 268 DLNHGKYDGYAGDIWSLGVSILE 290
L + K+ D+W+ GV + E
Sbjct: 188 SLAYNKF-SIKSDVWAFGVLLWE 209
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 89
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 205
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 206 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 23/244 (9%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG--AHIRQ----EHILSDLAR 200
E +IL VN VV Y+ + ++L M+GG L+ H+ Q E A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 201 QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIA 258
++ GL LH+ +IV+RD+KP N+L++ +++I+D G++ + QT+ VGT+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVG 350
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP 318
YM+PE + + +Y ++ D W+LG + E G+ PF ++ + + P
Sbjct: 351 YMAPEVVKNE----RYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 319 PEAPEMASREFRDFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILP 373
E E S + R S+ L KDP R A ++ +HP + ++ + + P
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM--LEP 463
Query: 374 PPRP 377
P +P
Sbjct: 464 PFKP 467
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 123
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 183
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 238
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 239 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 295
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 23/244 (9%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG--AHIRQ----EHILSDLAR 200
E +IL VN VV Y+ + ++L M+GG L+ H+ Q E A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 201 QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIA 258
++ GL LH+ +IV+RD+KP N+L++ +++I+D G++ + QT+ VGT+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVG 350
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQP 318
YM+PE + + +Y ++ D W+LG + E G+ PF ++ + + P
Sbjct: 351 YMAPEVVKNE----RYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 319 PEAPEMASREFRDFISRCLQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILP 373
E E S + R S+ L KDP R A ++ +HP + ++ + + P
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM--LEP 463
Query: 374 PPRP 377
P +P
Sbjct: 464 PFKP 467
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R +++E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 188
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 189 F-SIKSDVWAFGVLLWE 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 94
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 154
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 155 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 210
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
D+WS+G + E + F V +
Sbjct: 211 V--DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 268
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 269 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 84
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 85 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 144
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 199
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F PE E+ S
Sbjct: 200 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEV-S 256
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R +++E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE----SLAYNK 186
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 187 F-SIKSDVWAFGVLLWE 202
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 83
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 84 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 143
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 198
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 199 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 255
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 290
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 77
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 192
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 193 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 249
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ EL++ +GSG+ GTV++ + P A+K++ + E I
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDL----ARQVLSG 205
+ ++HP++V+ + + I+++ + M G L E H +++I S L Q+ G
Sbjct: 71 MASMDHPHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPE 263
+ YL +R++VHRD+ N+L+ S +VKI DFG++R+L N+ G I +M+ E
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 264 RINTDLNHGKYDGYAGDIWSLGVSILEF 291
I H + + D+WS GV+I E
Sbjct: 190 CI-----HYRKFTHQSDVWSYGVTIWEL 212
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 91
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 151
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 152 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMVPFVVTRYYRAPEVI---LGMGYKEN 207
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
DIWS+G + E G F V +
Sbjct: 208 V--DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 265
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 266 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R +++E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE----SLAYNK 189
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 190 F-SIKSDVWAFGVLLWE 205
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 85
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 86 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 145
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 200
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 201 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 257
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 292
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R +++E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 188
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 189 F-SIKSDVWAFGVLLWE 204
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 79
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 194
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS--LMFAICFAQ----PPEAPEMAS 326
KYD + D+WSLGV I+ L +P G S + I Q PE E+ S
Sbjct: 195 KYDK-SCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-S 251
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ EL++ +GSG+ GTV++ + P A+K++ + E I
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 93
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDL----ARQVLSG 205
+ ++HP++V+ + + I+++ + M G L E H +++I S L Q+ G
Sbjct: 94 MASMDHPHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPE 263
+ YL +R++VHRD+ N+L+ S +VKI DFG++R+L N+ G I +M+ E
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 264 RINTDLNHGKYDGYAGDIWSLGVSILEF 291
I H + + D+WS GV+I E
Sbjct: 213 CI-----HYRKFTHQSDVWSYGVTIWEL 235
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 129
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 130 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 189
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 244
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS--LMFAICFAQ----PPEAPEMAS 326
KYD + D+WSLGV I+ L +P G S + I Q PE E+ S
Sbjct: 245 KYDK-SCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-S 301
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 336
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 77
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 78 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 135
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 191
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 192 TFT-IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 40/278 (14%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 77
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILA---QTMDPCNSAVGTIAYMSPERINTDL 269
HRD+KP NLL S + +K+ DFG ++ +PC T Y++PE + +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY----TPYYVAPEVLGPE- 192
Query: 270 NHGKYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPE 323
KYD + D+WSLGV + G PF A+ M F P +
Sbjct: 193 ---KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE- 247
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
S E + I L+ +P R + + HP+I+++ +
Sbjct: 248 -VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR---------QEHILSD 197
E +IL V+ +V ++ ++ +++ M+GG + HI QE
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR-YHIYNVDEDNPGFQEPRAIF 293
Query: 198 LARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTI 257
Q++SGL +LH+R I++RD+KP N+L++ NV+I+D G++ L GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 258 AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFA 316
+M+PE + + +YD ++ D ++LGV++ E R PF A G + + L +
Sbjct: 354 GFMAPELLLGE----EYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LE 407
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
Q P+ S +DF LQKDP R
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
R+G+G G VW + ++V + G+ E +++ + H +V+ +
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA 83
Query: 165 MYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R +HR
Sbjct: 84 VVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERNYIHR 141
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDG 276
D++ +N+L++ + + KIADFG++R++ A I + +PE I N+G +
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYGTFT- 196
Query: 277 YAGDIWSLGVSILEFYL-GRFPF 298
D+WS G+ + E GR P+
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR---------QEHILSD 197
E +IL V+ +V ++ ++ +++ M+GG + HI QE
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR-YHIYNVDEDNPGFQEPRAIF 293
Query: 198 LARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTI 257
Q++SGL +LH+R I++RD+KP N+L++ NV+I+D G++ L GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 258 AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFA 316
+M+PE + + +YD ++ D ++LGV++ E R PF A G + + L +
Sbjct: 354 GFMAPELLLGE----EYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LE 407
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
Q P+ S +DF LQKDP R
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 78
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 79 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 138
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 193
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 194 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 250
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 285
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR---------QEHILSD 197
E +IL V+ +V ++ ++ +++ M+GG + HI QE
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR-YHIYNVDEDNPGFQEPRAIF 293
Query: 198 LARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTI 257
Q++SGL +LH+R I++RD+KP N+L++ NV+I+D G++ L GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 258 AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFA 316
+M+PE + + +YD ++ D ++LGV++ E R PF A G + + L +
Sbjct: 354 GFMAPELLLGE----EYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LE 407
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
Q P+ S +DF LQKDP R
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 32/274 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 93
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 94 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 153
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 208
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ-----GDWASLMFAICFAQPPEAPEMASR 327
KYD + D+WSLGV + G PF G + PE E+ S
Sbjct: 209 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-SE 266
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 267 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 300
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 79
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 194
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPF------AVGRQGDWASLMFAICFAQPPEAPEMAS 326
KYD + D+WSLGV + G PF A+ M F P + S
Sbjct: 195 KYDK-SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE--VS 251
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 80
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 81 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 138
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 194
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 195 TFT-IKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVI---YGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG+ G V R A+K + + N + R+ RE+ +++ VNH N++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLL 83
Query: 164 DMYDRNGEIE------VLLEYMDGGSLEGAHIRQEHI-LSDLARQVLSGLAYLHKRKIVH 216
+++ +E +++E MD + + +H +S L Q+L G+ +LH I+H
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KPSN+++ S +KI DFG++R A T V T Y +PE I L G +
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVI---LGMGYKEN 199
Query: 277 YAGDIWSLGVSILEFYLGRFPF---------------------------------AVGRQ 303
D+WS+G + E + F V +
Sbjct: 200 V--DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 257
Query: 304 GDWASLMFA-----ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+A F + F E ++ + + RD +S+ L D R + LQHP+I
Sbjct: 258 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR---------QEHILSD 197
E +IL V+ +V ++ ++ +++ M+GG + HI QE
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR-YHIYNVDEDNPGFQEPRAIF 293
Query: 198 LARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTI 257
Q++SGL +LH+R I++RD+KP N+L++ NV+I+D G++ L GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 258 AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFA 316
+M+PE + + +YD ++ D ++LGV++ E R PF A G + + L +
Sbjct: 354 GFMAPELLLGE----EYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LE 407
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
Q P+ S +DF LQKDP R
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPT---SRVFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ + A+K DSVR + +E +R
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVL------SGL 206
+HP++VK + N + +++E G L + ++ DLA +L + L
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELR-SFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERI 265
AYL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQ 317
N + A D+W GV + E + G PF +GR + L
Sbjct: 185 NF-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PM 233
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
PP P +++C DP R
Sbjct: 234 PPNCPPT----LYSLMTKCWAYDPSRR 256
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 188
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 189 F-SIKSDVWAFGVLLWE 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPE----SLAYNK 189
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 190 F-SIKSDVWAFGVLLWE 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 193
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 194 F-SIKSDVWAFGVLLWE 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 73
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 74 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 131
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 187
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 188 TFT-IKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 192
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 193 F-SIKSDVWAFGVLLWE 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 185
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 160
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 161 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 216
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 217 S-ASDVWSYGIVLWE 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE----SLAYNK 193
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 194 F-SIKSDVWAFGVLLWE 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 9 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 66
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL H + L D+ARQ G+ YLH
Sbjct: 67 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 125
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ + ++ G+I +M+PE I
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR-- 183
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFA 299
+ + D+++ G+ + E G+ P++
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 143
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 199
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 200 S-ASDVWSYGIVLWE 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHP 157
++ +++G G G V+ V S A+K + ED++ + +E +++++ HP
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHP 69
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLH 210
N+V+ + R ++ E+M G+L ++R+ + +L +A Q+ S + YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINT 267
K+ +HRD+ N L+ + VK+ADFG+SR++ T D + G I + +PE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE---- 182
Query: 268 DLNHGKYDGYAGDIWSLGVSILE 290
L + K+ D+W+ GV + E
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG G V R+ P V A+K + + + R E I+ +HPN+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ R ++ EYM+ GSL+ H Q I L + R V +G+ YL VHRD
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+L++S+ K++DFG+SR+L D + G I + +PE I +
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF-----RTF 231
Query: 276 GYAGDIWSLGVSILE 290
A D+WS GV + E
Sbjct: 232 SSASDVWSFGVVMWE 246
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 72
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 73 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 130
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 186
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 187 TFT-IKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE----SLAYNK 186
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 187 F-SIKSDVWAFGVLLWE 202
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPE----SLAYNK 190
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 191 F-SIKSDVWAFGVLLWE 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI----NYG 185
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 33/227 (14%)
Query: 103 KGNRIGSGSGGTVWRVVHPPTSRV--FALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
+G ++G G+ G V++ +ALK I G + CREI +LR++ HPNV+
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIALLRELKHPNVI 81
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH---------------ILSDLARQVLSG 205
++ + + +V L + D + HI + H ++ L Q+L G
Sbjct: 82 SLQKVFLSHADRKVWLLF-DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 206 LAYLHKRKIVHRDIKPSNLLINSS----KNVKIADFGVSRILAQTMDP---CNSAVGTIA 258
+ YLH ++HRD+KP+N+L+ VKIAD G +R+ + P + V T
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGD 305
Y +PE + ++ K A DIW++G E L P RQ D
Sbjct: 201 YRAPELLLGARHYTK----AIDIWAIGCIFAEL-LTSEPIFHCRQED 242
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 201
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 202 F-SIKSDVWAFGVLLWE 217
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTFTAHAGAKFPIKWTAPE----SLAYNK 186
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 187 F-SIKSDVWAFGVLLWE 202
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 170
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 171 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 226
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 227 S-ASDVWSYGIVLWE 240
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNH-------PNV 159
+G G G V H T + ALK++Y DS +++ ++V+H P++
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLY----DSPKAR--------QEVDHHWQASGGPHI 65
Query: 160 VKCHDMYD--RNGE--IEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYL 209
V D+Y+ +G+ + +++E M+GG L G E +++ R + + + +L
Sbjct: 66 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 125
Query: 210 HKRKIVHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
H I HRD+KP NLL S + +K+ DFG ++ T + + T Y++PE +
Sbjct: 126 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLG 183
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS--LMFAICFAQ----PPE 320
+ KYD + D+WSLGV I+ L FP G S + I Q PE
Sbjct: 184 PE----KYDK-SCDMWSLGV-IMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 321 APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
E+ S + + I L+ DP R Q + HP+I
Sbjct: 238 WSEV-SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNH-------PNV 159
+G G G V H T + ALK++Y DS +++ ++V+H P++
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLY----DSPKAR--------QEVDHHWQASGGPHI 84
Query: 160 VKCHDMYD--RNGE--IEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYL 209
V D+Y+ +G+ + +++E M+GG L G E +++ R + + + +L
Sbjct: 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 144
Query: 210 HKRKIVHRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERIN 266
H I HRD+KP NLL S + +K+ DFG ++ T + + T Y++PE +
Sbjct: 145 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLG 202
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS--LMFAICFAQ----PPE 320
+ KYD + D+WSLGV I+ L FP G S + I Q PE
Sbjct: 203 PE----KYDK-SCDMWSLGV-IMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 321 APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
E+ S + + I L+ DP R Q + HP+I
Sbjct: 257 WSEV-SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 188
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 189 F-SIKSDVWAFGVLLWE 204
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 193
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 194 F-SIKSDVWAFGVLLWE 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
R+G+G G VW + ++V + G+ E +++ + H +V+ +
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYA 85
Query: 165 MYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R +HR
Sbjct: 86 VVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERNYIHR 143
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHGKYDG 276
D++ +N+L++ + + KIADFG++R++ A I + +PE I N+G +
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYGTFT- 198
Query: 277 YAGDIWSLGVSILEFYL-GRFPF 298
D+WS G+ + E GR P+
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPT---SRVFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ + A+K DSVR + +E +R
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 186 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 234
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 235 PNCPPT----LYSLMTKCWAYDPSRR 256
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 190
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 191 F-SIKSDVWAFGVLLWE 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 193
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 194 F-SIKSDVWAFGVLLWE 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 94
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 95 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 214 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 262
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 263 PNCPPT----LYSLMTKCWAYDPSRR 284
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 107 IGSGSGGTVWRVV-HPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
IG G+ G V H +RV A+K I + + REI+IL H NV+ D+
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRV-AIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 166 YDRNGEIEV---------LLEYMDGGSLEGAHIRQEHILSDLARQVLSGLAYLHKRKIVH 216
R +E L+E L+ + +HI L Q+L GL Y+H ++H
Sbjct: 110 L-RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY-QILRGLKYIHSANVLH 167
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTDLNHGK 273
RD+KPSNLLIN++ ++KI DFG++RI D V T Y +PE + LN
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM---LNSKG 224
Query: 274 YDGYAGDIWSLGVSILEFYLGR--FP 297
Y + DIWS+G + E R FP
Sbjct: 225 YTK-SIDIWSVGCILAEMLSNRPIFP 249
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 190
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 191 F-SIKSDVWAFGVLLWE 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 188
Query: 274 YDGYAGDIWSLGVSILE 290
+ D+W+ GV + E
Sbjct: 189 F-SIKSDVWAFGVLLWE 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 77
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 78 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 135
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYG 191
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 192 TFT-IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 186 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 234
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 235 PNCPPT----LYSLMTKCWAYDPSRR 256
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IGSG G V R+ P V A+K + + + R E I+ +HPN+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ R ++ EYM+ GSL+ H Q I L + R V +G+ YL VHRD
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+L++S+ K++DFG+SR+L D + G I + +PE I +
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF-----RTF 231
Query: 276 GYAGDIWSLGVSILE 290
A D+WS GV + E
Sbjct: 232 SSASDVWSFGVVMWE 246
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 76
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 77 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 134
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYG 190
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 191 TFT-IKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTS----RVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+K +G G G V + PT+ + A+K + + RS +EI+ILR + H
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH 92
Query: 157 PNVVKCHDMYDRNG--EIEVLLEYMDGGSLEGAHIRQEHILSDL---ARQVLSGLAYLHK 211
+++K + G +++++EY+ GSL R L+ L A+Q+ G+AYLH
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTD 268
+ +HRD+ N+L+++ + VKI DFG+++ + + + + + +PE +
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 269 LNHGKYDGYAGDIWSLGVSILEF 291
+ YA D+WS GV++ E
Sbjct: 213 KFY-----YASDVWSFGVTLYEL 230
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 72 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 191 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 239
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 240 PNCPPT----LYSLMTKCWAYDPSRR 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 64 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 183 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 231
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 232 PNCPPT----LYSLMTKCWAYDPSRR 253
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTS----RVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+K +G G G V + PT+ + A+K + + RS +EI+ILR + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 157 PNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILSDL---ARQVLSGLAYLHK 211
+++K + GE +++++EY+ GSL R L+ L A+Q+ G+AYLH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTD 268
+ +HR++ N+L+++ + VKI DFG+++ + + + + + +PE +
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 269 LNHGKYDGYAGDIWSLGVSILEF 291
+ YA D+WS GV++ E
Sbjct: 196 KFY-----YASDVWSFGVTLYEL 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 69
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 70 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 189 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 237
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 238 PNCPPT----LYSLMTKCWAYDPSRR 259
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTS----RVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+K +G G G V + PT+ + A+K + + RS +EI+ILR + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 157 PNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILSDL---ARQVLSGLAYLHK 211
+++K + GE +++++EY+ GSL R L+ L A+Q+ G+AYLH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERINTD 268
+ +HR++ N+L+++ + VKI DFG+++ + + + + + +PE +
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 269 LNHGKYDGYAGDIWSLGVSILEF 291
+ YA D+WS GV++ E
Sbjct: 196 KFY-----YASDVWSFGVTLYEL 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 129
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYG 185
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 186 TFT-IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 66
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 67 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 124
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYG 180
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 181 TFT-IKSDVWSFGILLTEIVTHGRIPY 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPT---SRVFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ + A+K DSVR + +E +R
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVL------SGL 206
+HP++VK + N + +++E G L + ++ DLA +L + L
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELR-SFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERI 265
AYL ++ VHRDI N+L++++ VK+ DFG+SR + T + I +M+PE I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQ 317
N + A D+W GV + E + G PF +GR + L
Sbjct: 185 NF-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PM 233
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
PP P +++C DP R
Sbjct: 234 PPNCPPT----LYSLMTKCWAYDPSRR 256
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSR---VFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ A+K DSVR + +E +R
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 68
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG-AHIRQEHI-LSDL---ARQVLSGLA 207
+HP++VK + N + +++E G L +R+ + L+ L A Q+ + LA
Sbjct: 69 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERIN 266
YL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE IN
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 267 TDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQP 318
+ A D+W GV + E + G PF +GR + L P
Sbjct: 188 F-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PMP 236
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P P +++C DP R
Sbjct: 237 PNCPPT----LYSLMTKCWAYDPSRR 258
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 27/243 (11%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHP 157
++ +K +IG G+ G V++ H T + ALK V+ N ++ REI+IL+ + H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 158 NVVKCHDM-------YDR-NGEIEVLLEYMD---GGSLEGAHIRQEHILSDLAR---QVL 203
NVV ++ Y+R I ++ ++ + G L ++ LS++ R +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLL 135
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRI--LAQTMDP--CNSAVGTIAY 259
+GL Y+H+ KI+HRD+K +N+LI +K+ADFG++R LA+ P + V T+ Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQP 318
PE + + ++G D+W G + E + R P G + +L+ +C +
Sbjct: 196 RPPELLLGERDYGP----PIDLWGAGCIMAEMW-TRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 319 PEA 321
PE
Sbjct: 251 PEV 253
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG++R+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 42/235 (17%)
Query: 146 REIEILRDVNHPNVVKCHDMYDRNGEIE--------VLLEYMDGGSL------EGAHIRQ 191
RE + +NHP +V + GE E +++EY+DG +L EG +
Sbjct: 61 REAQNAAALNHPAIVAVY----ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCN 251
I ++ L + H+ I+HRD+KP+N++I+++ VK+ DFG++R +A + +
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 252 ---SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS 308
+ +GT Y+SPE+ D + D++SLG + E G PF GD
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDAR-----SDVYSLGCVLYEVLTGEPPF----TGDSP- 224
Query: 309 LMFAICFAQPPEAP-------EMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
++ + E P E S + + + L K+P +R+ A ++ +
Sbjct: 225 --VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E ++ + E E++
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---REGAMSEEDFIEEAEVMMK 58
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 118 YLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 175
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 176 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 227
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 39/267 (14%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI 150
+I+ E++ +G G+ G V WR ++ A+K I +S R E+
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKWR------AKDVAIKQI---ESESERKAFIVELRQ 55
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL----EGA----HIRQEHILSDLARQV 202
L VNHPN+VK + + +++EY +GGSL GA + H +S Q
Sbjct: 56 LSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS-WCLQC 112
Query: 203 LSGLAYLHK---RKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIA 258
G+AYLH + ++HRD+KP NLL+ + V KI DFG + + M + G+ A
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSAA 169
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFAQ 317
+M+PE + G D++S G+ + E R PF +G G +M+A+
Sbjct: 170 WMAPE-----VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNGT 222
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P + + ++RC KDP R
Sbjct: 223 RPPLIKNLPKPIESLMTRCWSKDPSQR 249
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 52
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 112
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPP 170
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 171 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 5 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 56
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 116
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 117 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPP 174
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 175 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 39/267 (14%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI 150
+I+ E++ +G G+ G V WR ++ A+K I +S R E+
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKWR------AKDVAIKQI---ESESERKAFIVELRQ 54
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL----EGA----HIRQEHILSDLARQV 202
L VNHPN+VK + + +++EY +GGSL GA + H +S Q
Sbjct: 55 LSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS-WCLQC 111
Query: 203 LSGLAYLHK---RKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIA 258
G+AYLH + ++HRD+KP NLL+ + V KI DFG + + M + G+ A
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSAA 168
Query: 259 YMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFAQ 317
+M+PE + G D++S G+ + E R PF +G G +M+A+
Sbjct: 169 WMAPE-----VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNGT 221
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P + + ++RC KDP R
Sbjct: 222 RPPLIKNLPKPIESLMTRCWSKDPSQR 248
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 57
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 118 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPP 175
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 176 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 107 IGSGSGGTVWR-VVHPPTSR--VFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V R + P + A+K + G + + R + E I+ HPN+++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +L E+M+ G+L+ + +R L + R + SG+ YL + VHR
Sbjct: 84 GVVTNSMPVMILTEFMENGALD-SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQ-TMDPC-NSAVGT---IAYMSPERINTDLNHG 272
D+ N+L+NS+ K++DFG+SR L + + DP S++G I + +PE I
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI----AFR 198
Query: 273 KYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K+ A D WS G+ + E G P+ + Q ++ PP+ P +
Sbjct: 199 KFTS-ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLML 257
Query: 331 DFISRCLQKDPHSR 344
D C QKD ++R
Sbjct: 258 D----CWQKDRNAR 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+ R+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG G G V R+ P + A+K + + D R E I+ +HPN++
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ + + ++ EYM+ GSL+ A +R+ L + R + SG+ YL VHR
Sbjct: 97 GVVTKCKPVMIITEYMENGSLD-AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHR 155
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+NS+ K++DFG+SR+L + + G I + +PE I + K+
Sbjct: 156 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKF 211
Query: 275 DGYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 212 TS-ASDVWSYGIVMWE 226
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPP 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 191 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 107 IGSGSGGTVWR-VVHPPTSR--VFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V R + P + A+K + G + + R + E I+ HPN+++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +L E+M+ G+L+ + +R L + R + SG+ YL + VHR
Sbjct: 82 GVVTNSMPVMILTEFMENGALD-SFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQ-TMDPC-NSAVGT---IAYMSPERINTDLNHG 272
D+ N+L+NS+ K++DFG+SR L + + DP S++G I + +PE I
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI----AFR 196
Query: 273 KYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQPPEAPEMASREFR 330
K+ A D WS G+ + E G P+ + Q ++ PP+ P +
Sbjct: 197 KFTS-ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLML 255
Query: 331 DFISRCLQKDPHSR 344
D C QKD ++R
Sbjct: 256 D----CWQKDRNAR 265
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVH---PPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ + A+K DSVR + +E +R
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVL------SGL 206
+HP++VK + N + +++E G L + ++ DLA +L + L
Sbjct: 447 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELR-SFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERI 265
AYL ++ VHRDI N+L++S+ VK+ DFG+SR + T + I +M+PE I
Sbjct: 505 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQ 317
N + A D+W GV + E + G PF +GR + L
Sbjct: 565 NF-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PM 613
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
PP P +++C DP R
Sbjct: 614 PPNCPPT----LYSLMTKCWAYDPSRR 636
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 12 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 63
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 124 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPP 181
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 182 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 22/264 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHED-SVRSQICREIEILRDVN-HPN 158
Q+ +R+G GS G V++V R++A+K R++ E+ V HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLE------GAHIRQEHILSDLARQVLSGLAYLHKR 212
V+ ++ G I L + G SL+ GA + + + L R L LA+LH +
Sbjct: 119 CVRLEQAWEEGG-ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYL-RDTLLALAHLHSQ 176
Query: 213 KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+VH D+KP+N+ + K+ DFG+ ++ + G + P + +L G
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGL------LVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
Y G A D++SLG++ILE G +G W L PPE S E R
Sbjct: 231 SY-GTAADVFSLGLTILEVAC-NMELPHGGEG-WQQLRQGYL---PPEFTAGLSSELRSV 284
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFI 356
+ L+ DP R A LL P +
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVL 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E S+ E E++
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---KEGSMSEDDFIEEAEVMMK 78
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 79 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 138 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 195
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 196 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 247
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQ 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
+IGSG V++V++ +++A+K + D+ R EI L + + K
Sbjct: 19 QIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIR 76
Query: 165 MYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHRD 218
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH D
Sbjct: 77 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 136
Query: 219 IKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +G
Sbjct: 137 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSRENG 194
Query: 277 YAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASRE 328
+ D+WSLG + G+ PF + + S + AI E P++ ++
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKD 252
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D + CL++DP R +LL HP++
Sbjct: 253 LQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-----EIEILRDVNHPNVVK 161
IG G G V+ T +++A+K + + + + ++ + P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVH 216
+ ++ +L+ M+GG L H+ Q + S+ A +++ GL ++H R +V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP+N+L++ +V+I+D G++ ++ +++VGT YM+PE + + YD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGV---AYDS 370
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D +SLG + + G PF + D + + E P+ S E R +
Sbjct: 371 SA-DWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGL 428
Query: 337 LQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPP 375
LQ+D + R A ++ + PF V Q PPP
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV---FLQKYPPP 469
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E ++ + E E++
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---REGAMSEEDFIEEAEVMMK 56
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 116 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 173
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 174 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 225
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG G G V R+ P + A+K + + D R E I+ +HPN++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ + + ++ EYM+ GSL+ A +R+ L + R + SG+ YL VHR
Sbjct: 82 GVVTKCKPVMIITEYMENGSLD-AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 140
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+NS+ K++DFG+SR+L + + G I + +PE I + K+
Sbjct: 141 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKF 196
Query: 275 DGYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 197 TS-ASDVWSYGIVMWE 211
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-----EIEILRDVNHPNVVK 161
IG G G V+ T +++A+K + + + + ++ + P +V
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVH 216
+ ++ +L+ M+GG L H+ Q + S+ A +++ GL ++H R +V+
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP+N+L++ +V+I+D G++ ++ +++VGT YM+PE + + YD
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGV---AYDS 369
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D +SLG + + G PF + D + + E P+ S E R +
Sbjct: 370 SA-DWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGL 427
Query: 337 LQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPP 375
LQ+D + R A ++ + PF V Q PPP
Sbjct: 428 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV---FLQKYPPP 468
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 107 IGSGSGGTVW--RVVHPPTSRVF-ALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V + P +F A+K + + + R E I+ +HPNV+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ ++ + ++ E+M+ GSL+ + +RQ L + R + +G+ YL VHR
Sbjct: 75 GVVTKSTPVMIITEFMENGSLD-SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR 133
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILA-QTMDPC-NSAVGT---IAYMSPERINTDLNHG 272
+ N+L+NS+ K++DFG+SR L T DP SA+G I + +PE I +
Sbjct: 134 ALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI----QYR 189
Query: 273 KYDGYAGDIWSLGVSILE 290
K+ A D+WS G+ + E
Sbjct: 190 KFTS-ASDVWSYGIVMWE 206
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRV----FALKVIYGNHEDSVRSQICREIEIL 151
I+P+ + + IG+G G V++ + +S A+K + + + R E I+
Sbjct: 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 100
Query: 152 RDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSG 205
+H N+++ + + + ++ EYM+ G+L+ +R++ L + R + +G
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALD-KFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL VHRD+ N+L+NS+ K++DFG+SR+L + + G I + +P
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILE 290
E I ++ K+ A D+WS G+ + E
Sbjct: 220 EAI----SYRKFTS-ASDVWSFGIVMWE 242
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG G G V R+ P + A+K + + D R E I+ +HPN++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------ILSDLARQVLSGLAYLHKRKIVHR 217
+ + + ++ EYM+ GSL+ A +R+ L + R + SG+ YL VHR
Sbjct: 76 GVVTKCKPVMIITEYMENGSLD-AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 134
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+NS+ K++DFG+SR+L + + G I + +PE I + K+
Sbjct: 135 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKF 190
Query: 275 DGYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 191 TS-ASDVWSYGIVMWE 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 27/280 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
R++ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 395
Query: 274 YDGYAGDIWSLGVSILEF-YLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
+ D+W+ GV + E G P+ D + + + E PE + +
Sbjct: 396 FS-IKSDVWAFGVLLWEIATYGMSPYP---GIDLSQVYELLEKDYRMERPEGCPEKVYEL 451
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
+ C Q +P R P+ + F +S ++ + + L
Sbjct: 452 MRACWQWNPSDR-PSFAEIHQAFETMFQESSISDEVEKEL 490
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVN-HPNVVKCH 163
+IGSG V++V++ +++A+K + D+ R EI L + H + K
Sbjct: 15 QIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD--KII 71
Query: 164 DMYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHR 217
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH
Sbjct: 72 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 131
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
D+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +
Sbjct: 132 DLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSREN 189
Query: 276 GYAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASR 327
G + D+WSLG + G+ PF + + S + AI E P++ +
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEK 247
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ +D + CL++DP R +LL HP++
Sbjct: 248 DLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E ++ + E E++
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---REGAMSEEDFIEEAEVMMK 58
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 118 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 175
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 176 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 227
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 27/280 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
R++ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 392
Query: 274 YDGYAGDIWSLGVSILEF-YLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
+ D+W+ GV + E G P+ D + + + E PE + +
Sbjct: 393 FS-IKSDVWAFGVLLWEIATYGMSPYP---GIDLSQVYELLEKDYRMERPEGCPEKVYEL 448
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
+ C Q +P R P+ + F +S ++ + + L
Sbjct: 449 MRACWQWNPSDR-PSFAEIHQAFETMFQESSISDEVEKEL 487
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 78
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL H + L D+ARQ G+ YLH
Sbjct: 79 HVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ ++ G+I +M+PE I
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR-- 195
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFA 299
+ + D+++ G+ + E G+ P++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
LQ R+G+G G VW ++V A+K + E +I++ + H +V
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTMSP--ESFLEEAQIMKKLKHDKLV 67
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + I ++ EYM+ GSL EG ++ + L D+A QV +G+AY+ +
Sbjct: 68 QLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPN-LVDMAAQVAAGMAYIERMN 125
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HRD++ +N+L+ + KIADFG++R++ A I + +PE +G
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAA----LYG 181
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
++ D+WS G+ + E GR P+ G + P P+ +
Sbjct: 182 RFT-IKSDVWSFGILLTELVTKGRVPYP-GMNNREVLEQVERGYRMP--CPQDCPISLHE 237
Query: 332 FISRCLQKDPHSRWPAAQLLQ 352
+ C +KDP R P + LQ
Sbjct: 238 LMIHCWKKDPEER-PTFEYLQ 257
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-----EIEILRDVNHPNVVK 161
IG G G V+ T +++A+K + + + + ++ + P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVH 216
+ ++ +L+ M+GG L H+ Q + S+ A +++ GL ++H R +V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP+N+L++ +V+I+D G++ ++ +++VGT YM+PE + + YD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGV---AYDS 370
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D +SLG + + G PF + D + + E P+ S E R +
Sbjct: 371 SA-DWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGL 428
Query: 337 LQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPP 375
LQ+D + R A ++ + PF V Q PPP
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV---FLQKYPPP 469
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-----EIEILRDVNHPNVVK 161
IG G G V+ T +++A+K + + + + ++ + P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVH 216
+ ++ +L+ M+GG L H+ Q + S+ A +++ GL ++H R +V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
RD+KP+N+L++ +V+I+D G++ ++ +++VGT YM+PE + + YD
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGV---AYDS 370
Query: 277 YAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
A D +SLG + + G PF + D + + E P+ S E R +
Sbjct: 371 SA-DWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGL 428
Query: 337 LQKDPHSRW-----PAAQLLQHPFILRAGQSQVNQNLRQILPPP 375
LQ+D + R A ++ + PF V Q PPP
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV---FLQKYPPP 469
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+VG+ + + P
Sbjct: 133 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEETSSVGSKFPVRWSPP 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 191 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVH---PPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
I ++ G IG G G V + ++ + A+K DSVR + +E +R
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 153 DVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDLARQVL------SGL 206
+HP++VK + N + +++E G L + ++ DLA +L + L
Sbjct: 447 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELR-SFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 207 AYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILA-QTMDPCNSAVGTIAYMSPERI 265
AYL ++ VHRDI N+L++++ VK+ DFG+SR + T + I +M+PE I
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFYL-GRFPF-------AVGRQGDWASLMFAICFAQ 317
N + A D+W GV + E + G PF +GR + L
Sbjct: 565 NF-----RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------PM 613
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
PP P +++C DP R
Sbjct: 614 PPNCPPT----LYSLMTKCWAYDPSRR 636
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 27/280 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ R ++ E+M G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
R++ N L+ + VK+ADFG+SR++ T D + G I + +PE L + K
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE----SLAYNK 434
Query: 274 YDGYAGDIWSLGVSILEF-YLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
+ D+W+ GV + E G P+ D + + + E PE + +
Sbjct: 435 FS-IKSDVWAFGVLLWEIATYGMSPYP---GIDLSQVYELLEKDYRMERPEGCPEKVYEL 490
Query: 333 ISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQIL 372
+ C Q +P R P+ + F +S ++ + + L
Sbjct: 491 MRACWQWNPSDR-PSFAEIHQAFETMFQESSISDEVEKEL 529
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVN-HPNVVKCH 163
+IGSG V++V++ +++A+K + D+ R EI L + H + K
Sbjct: 35 QIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD--KII 91
Query: 164 DMYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHR 217
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH
Sbjct: 92 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 151
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
D+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +
Sbjct: 152 DLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSREN 209
Query: 276 GYAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASR 327
G + D+WSLG + G+ PF + + S + AI E P++ +
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEK 267
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ +D + CL++DP R +LL HP++
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
+IGSG V++V++ +++A+K + D+ R EI L + + K
Sbjct: 16 QIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIR 73
Query: 165 MYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHRD 218
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH D
Sbjct: 74 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 133
Query: 219 IKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +G
Sbjct: 134 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSRENG 191
Query: 277 YAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASRE 328
+ D+WSLG + G+ PF + + S + AI E P++ ++
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKD 249
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D + CL++DP R +LL HP++
Sbjct: 250 LQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E ++ + E E++
Sbjct: 6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---REGAMSEEDFIEEAEVMMK 61
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 120
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 121 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 178
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 179 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 230
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
+IGSG V++V++ +++A+K + D+ R EI L + + K
Sbjct: 63 QIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIR 120
Query: 165 MYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHRD 218
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH D
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 219 IKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +G
Sbjct: 181 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSRENG 238
Query: 277 YAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASRE 328
+ D+WSLG + G+ PF + + S + AI E P++ ++
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D + CL++DP R +LL HP++
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
L+ R+G+G G VW + ++V + G+ E +++ + H +V
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 67
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRK 213
+ + + + I ++ EYM+ GSL G + +L D+A Q+ G+A++ +R
Sbjct: 68 RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLL-DMAAQIAEGMAFIEERN 125
Query: 214 IVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-NSAVGTIAYMSPERINTDLNHG 272
+HR+++ +N+L++ + + KIADFG++R++ A I + +PE I N+G
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI----NYG 181
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPF 298
+ D+WS G+ + E GR P+
Sbjct: 182 TFT-IKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 37/235 (15%)
Query: 146 REIEILRDVN-HPNVVK--CHDMYDRNGE---IEV----LLEYMDGGSLEGAHIRQEHIL 195
RE+++LR+ + HPNV++ C + DR + IE+ L EY++ AH+ E I
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCAATLQEYVEQKDF--AHLGLEPIT 122
Query: 196 SDLARQVLSGLAYLHKRKIVHRDIKPSNLLI---NSSKNVK--IADFGVSRILA---QTM 247
L +Q SGLA+LH IVHRD+KP N+LI N+ +K I+DFG+ + LA +
Sbjct: 123 --LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 248 DPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYL---GRFPFAVGRQG 304
+ GT +++PE ++ D Y DI+S G +Y+ G PF Q
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENP--TYTVDIFSAGCVF--YYVISEGSHPFGKSLQR 236
Query: 305 DWASLMFAIC---FAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
A+++ C P + ++ +RE I + + DP R A +L+HPF
Sbjct: 237 Q-ANILLGACSLDCLHPEKHEDVIARE---LIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 33/273 (12%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVN-HPNVVKCH 163
+IGSG V++V++ +++A+K + D+ R EI L + H + K
Sbjct: 35 QIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD--KII 91
Query: 164 DMYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHR 217
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH
Sbjct: 92 RLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 151
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDP------CNSAVGTIAYMSPERINTDLNH 271
D+KP+N LI +K+ DFG+ A M P +S VGT+ YM PE I D++
Sbjct: 152 DLKPANFLIVDGM-LKLIDFGI----ANQMQPDXXXVVKDSQVGTVNYMPPEAIK-DMSS 205
Query: 272 GKYDGYAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPE 323
+ +G + D+WSLG + G+ PF + + S + AI E P+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPD 263
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ ++ +D + CL++DP R +LL HP++
Sbjct: 264 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
I ++ G RIGSGS GTV++ V L V + E+ +LR
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTR 78
Query: 156 HPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI----LSDLARQVLSGLAYLH 210
H N++ Y ++ ++ ++ +G SL H + L D+ARQ G+ YLH
Sbjct: 79 HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 211 KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDP--CNSAVGTIAYMSPERINTD 268
+ I+HRD+K +N+ ++ VKI DFG++ ++ G+I +M+PE I
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR-- 195
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPFA 299
+ + D+++ G+ + E G+ P++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
+IGSG V++V++ +++A+K + D+ R EI L + + K
Sbjct: 63 QIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIR 120
Query: 165 MYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHRD 218
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH D
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 219 IKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
+KP+N LI +K+ DFG++ + T +S VGT+ YM PE I D++ + +G
Sbjct: 181 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK-DMSSSRENG 238
Query: 277 YAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASRE 328
+ D+WSLG + G+ PF + + S + AI E P++ ++
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D + CL++DP R +LL HP++
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ E M+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ E M+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 143
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 199
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 200 S-ASDVWSYGIVLWE 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRD 153
+I+P+EL IGSG G V +V A+K I E ++ + E E++
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI---REGAMSEEDFIEEAEVMMK 59
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLSGLA 207
++HP +V+ + + I ++ E+M+ G L ++R + L + V G+A
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD-YLRTQRGLFAAETLLGMCLDVCEGMA 118
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPER 264
YL + ++HRD+ N L+ ++ +K++DFG++R + D S+ GT + + SPE
Sbjct: 119 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEV 176
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPE 323
+ K D+WS GV + E F G+ P+ + ++ I P
Sbjct: 177 FSFSRYSSK-----SDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDISTGFRLYKPR 228
Query: 324 MASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+AS ++ C ++ P R ++LL+
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
+G+G G V R+ P + A+K + + + R E I+ +HPN+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ E M+ GSL+ H Q + L + R + SG+ YL VHRD
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 172
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + SPE I + K+
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI----AYRKFT 228
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 229 S-ASDVWSYGIVLWE 242
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDS-VRSQICREIEILRDVNHPNVVKCH 163
++G G+ G V++ + T+ A+K I HE+ V RE+ +L+++ H N+++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 164 DMYDRNGEIEVLLEYMDGG---SLEGAHIRQEHILSDLARQVLSGLAYLHKRKIVHRDIK 220
+ N + ++ EY + ++ ++ Q+++G+ + H R+ +HRD+K
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 221 PSNLLINSSKN-----VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYD 275
P NLL++ S +KI DFG++R + + T+ Y PE L ++
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI----LLGSRHY 215
Query: 276 GYAGDIWSLG 285
+ DIWS+
Sbjct: 216 STSVDIWSIA 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 22/197 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR-SQICREIEILRDVNHPNVVKCH 163
+++G G G V+ V S A+K + ED++ + +E +++++ HPN+V+
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILSDLARQVLSGLAYLHKRKIVH 216
+ ++ EYM G+L ++R+ + +L +A Q+ S + YL K+ +H
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLD-YLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGK 273
RD+ N L+ + VK+ADFG+SR++ T D + G I + +PE + + K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 274 YDGYAGDIWSLGVSILE 290
D+W+ GV + E
Sbjct: 212 -----SDVWAFGVLLWE 223
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 48/271 (17%)
Query: 106 RIGSGSGGTVWRV----VHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + P ++ + D+ R RE E+L ++ H ++VK
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 162 CHDMYDRNGEIEVLLEYMDGGSL---------------EG---AHIRQEHILSDLARQVL 203
+ + + ++ EYM G L EG + Q +L +A+Q+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH-IAQQIA 138
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS---------RILAQTMDPCNSAV 254
+G+ YL + VHRD+ N L+ + VKI DFG+S R+ TM P
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP----- 193
Query: 255 GTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAI 313
I +M PE I + K+ D+WSLGV + E F G+ P+ Q ++ I
Sbjct: 194 --IRWMPPESI----MYRKFTT-ESDVWSLGVVLWEIFTYGKQPW---YQLSNNEVIECI 243
Query: 314 CFAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+ + P +E + + C Q++PH R
Sbjct: 244 TQGRVLQRPRTCPQEVYELMLGCWQREPHMR 274
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V R+ P V A+K + + + R E I+ +HPNVV
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 164 DMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHI--LSDLARQVLSGLAYLHKRKIVHRD 218
+ R + +++E+M+ G+L+ H Q + L + R + +G+ YL VHRD
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRD 170
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+L+NS+ K++DFG+SR++ + + G + + +PE I + K+
Sbjct: 171 LAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI----QYRKFT 226
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 227 S-ASDVWSYGIVMWE 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 21/286 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR----SQICREIEILRDVNHPNVVKC 162
IG G+ V V T +V+A+K++ N D ++ S E ++L + + + +
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIM--NKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 163 HDMYDRNGEIEVLLEYMDGGSLEGAHIR-QEHILSDLAR----QVLSGLAYLHKRKIVHR 217
H + + +++EY GG L + E I +++AR +++ + +H+ VHR
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 218 DIKPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
DIKP N+L++ ++++ADFG ++ A AVGT Y+SPE +
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 277 YA--GDIWSLGVSILEFYLGRFPFAVGRQGD-WASLMFAICFAQPPEAPEMASREFRDFI 333
Y D W+LGV E + G+ PF + + ++ P E E RDFI
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
Query: 334 SR--CLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPRP 377
R C + R A HPF LR +PP P
Sbjct: 307 QRLLCPPETRLGRGGAGDFRTHPFFFGLDWD----GLRDSVPPFTP 348
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG+GS G V RV A+K I ED + + I REI IL +NH +VVK D+
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 166 Y-----DRNGEIEVLLEYMDGGSLE----GAHIRQEHILSDLARQVLSGLAYLHKRKIVH 216
++ E+ V+LE D + ++ + HI + L +L G+ Y+H I+H
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT-LLYNLLVGVKYVHSAGILH 179
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRIL 243
RD+KP+N L+N +VK+ DFG++R +
Sbjct: 180 RDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 96 INPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGNHEDSV-RSQICREIEI 150
I+P +L +G+G G V WR + A+K+I E S+ + E ++
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKV 57
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSG 205
+ +++H +V+ + + + I ++ EYM G L E H Q L ++ + V
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSP 262
+ YL ++ +HRD+ N L+N VK++DFG+SR + D S+ G+ + + P
Sbjct: 118 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSRGSKFPVRWSPP 175
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E L + K+ DIW+ GV + E Y LG+ P+
Sbjct: 176 EV----LMYSKFSS-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR--SQICREIEILRDVNHPNVVKCHD 164
+G G+ V+R H T +FA+KV N+ +R RE E+L+ +NH N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 165 MYDRNGEIE--VLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
+ + +++E+ GSL A+ E + R V+ G+ +L + IV
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 216 HRDIKPSNLL----INSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSP---ERINTD 268
HR+IKP N++ + K+ DFG +R L + S GT Y+ P ER
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLR 193
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPF 298
+H K G D+WS+GV+ G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 104 GNRIGSGSGGTVWR-VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
GN+ G G G V++ V+ T V L + + ++ Q +EI++ H N+V+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
++ ++ Y GSL +G H +A+ +G+ +LH+ +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRI---LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRDIK +N+L++ + KI+DFG++R AQ + + VGT AY +PE + ++
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX-SRIVGTTAYXAPEALRGEITP- 204
Query: 273 KYDGYAGDIWSLGVSILEFYLG 294
DI+S GV +LE G
Sbjct: 205 -----KSDIYSFGVVLLEIITG 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
+IGSG V++V++ +++A+K + D+ R EI L + + K
Sbjct: 63 QIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIR 120
Query: 165 MYDRNGEIEVLLEYMDGGSLE-GAHIRQEHILSDLARQ-----VLSGLAYLHKRKIVHRD 218
+YD + + M+ G+++ + ++++ + R+ +L + +H+ IVH D
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 219 IKPSNLLINSSKNVKIADFGVSRILA--QTMDPCNSAVGTIAYMSPERINTDLNHGKYDG 276
+KP+N LI +K+ DFG++ + T +S VG + YM PE I D++ + +G
Sbjct: 181 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK-DMSSSRENG 238
Query: 277 YAG-------DIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICF-AQPPEAPEMASRE 328
+ D+WSLG + G+ PF + + S + AI E P++ ++
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 329 FRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+D + CL++DP R +LL HP++
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 25/287 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G GS G V T ++A+K++ + +D V + + + P + + H
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + ++EY++GG L HI+Q + A ++ GL +L + I++RD
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLM-YHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
+K N++++S ++KIADFG+ + GT Y++PE I + Y G +
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII----AYQPY-GKS 522
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W+ GV + E G+ PF +G+ +F P+ S+E +
Sbjct: 523 VDWWAFGVLLYEMLAGQAPF----EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
Query: 339 KDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRPLSS 380
K P R + +H F ++ + ++I PP +P +S
Sbjct: 579 KHPGKRLGCGPEGERDIKEHAFFRYIDWEKLER--KEIQPPYKPKAS 623
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 32/274 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK + +D +++ RE+E+ R P++V+ D+
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXL----QDCPKAR--REVELHWRASQCPHIVRIVDV 123
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + ++ E +DGG L G E S++ + + + YLH I
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ + + + T Y++PE + +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE---- 238
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ-----GDWASLMFAICFAQPPEAPEMASR 327
KYD + D WSLGV G PF G + PE E+ S
Sbjct: 239 KYDK-SCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEV-SE 296
Query: 328 EFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + HP+I ++ +
Sbjct: 297 EVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTK 330
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC--REIEILRDVNHPNVVKCHD 164
IG G+ G V V T R++A+K++ C E ++L + + + H
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL-SDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++++Y GG L + E L D+AR +++ + +H+ VHRDI
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDI 201
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNS-AVGTIAYMSPERINT-DLNHGKYDGY 277
KP N+L++ + ++++ADFG + +S AVGT Y+SPE + + GKY G
Sbjct: 202 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY-GP 260
Query: 278 AGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
D WSLGV + E G PF A + +M Q P S E +D I R
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 320
Query: 337 L 337
+
Sbjct: 321 I 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC--REIEILRDVNHPNVVKCHD 164
IG G+ G V V T R++A+K++ C E ++L + + + H
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL-SDLAR----QVLSGLAYLHKRKIVHRDI 219
+ + ++++Y GG L + E L D+AR +++ + +H+ VHRDI
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDI 217
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNS-AVGTIAYMSPERINT-DLNHGKYDGY 277
KP N+L++ + ++++ADFG + +S AVGT Y+SPE + + GKY G
Sbjct: 218 KPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY-GP 276
Query: 278 AGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRC 336
D WSLGV + E G PF A + +M Q P S E +D I R
Sbjct: 277 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 336
Query: 337 L 337
+
Sbjct: 337 I 337
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 25/284 (8%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGN---HEDSVRSQICREIEILRDVNHPNVVKCH 163
+G GS G V T ++A+K++ + +D V + + + P + + H
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + ++EY++GG L HI+Q + A ++ GL +L + I++RD
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLM-YHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYA 278
+K N++++S ++KIADFG+ + GT Y++PE I + Y G +
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII----AYQPY-GKS 201
Query: 279 GDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQ 338
D W+ GV + E G+ PF +G+ +F P+ S+E +
Sbjct: 202 VDWWAFGVLLYEMLAGQAPF----EGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
Query: 339 KDPHSRWPAA-----QLLQHPFILRAGQSQVNQNLRQILPPPRP 377
K P R + +H F ++ + ++I PP +P
Sbjct: 258 KHPGKRLGCGPEGERDIKEHAFFRYIDWEKLER--KEIQPPYKP 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQIC--REIEILRDVNHPNVVKCHD 164
IG G+ G V V +VFA+K++ C E ++L + + + H
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHIL-SDLARQVLSGLAY----LHKRKIVHRDI 219
+ + + ++++Y GG L + E L ++AR L+ + +H+ VHRDI
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDI 201
Query: 220 KPSNLLINSSKNVKIADFGVS-RILAQTMDPCNSAVGTIAYMSPERINT-DLNHGKYDGY 277
KP N+L++ + ++++ADFG +++ + AVGT Y+SPE + + G+Y G
Sbjct: 202 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRY-GP 260
Query: 278 AGDIWSLGVSILEFYLGRFPF 298
D WSLGV + E G PF
Sbjct: 261 ECDWWSLGVCMYEMLYGETPF 281
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVR--SQICREIEILRDVNHPNVVKCHD 164
+G G+ V+R H T +FA+KV N+ +R RE E+L+ +NH N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 165 MYDRNGEIE--VLLEYMDGGSL-------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
+ + +++E+ GSL A+ E + R V+ G+ +L + IV
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 216 HRDIKPSNLL----INSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSP---ERINTD 268
HR+IKP N++ + K+ DFG +R L + GT Y+ P ER
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVXLYGTEEYLHPDMYERAVLR 193
Query: 269 LNHGKYDGYAGDIWSLGVSILEFYLGRFPF 298
+H K G D+WS+GV+ G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRV-FALKVIYGNH-------EDSVRSQICREIEI 150
AE + G +G G GTV+ H T R+ A+KVI N DSV + E+ +
Sbjct: 31 AEYRLGPLLGKGGFGTVF-AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL--EVAL 87
Query: 151 LRDVN----HPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQ 201
L V HP V++ D ++ ++LE +I ++ L + Q
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYM 260
V++ + + H R +VHRDIK N+LI+ + K+ DFG +L +P GT Y
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYS 205
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPE 320
PE I+ +Y +WSLG+ + + G PF ++ A L F
Sbjct: 206 PPEWISRH----QYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHF--------- 252
Query: 321 APEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
P S + I RCL P SR ++L P++
Sbjct: 253 -PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 45/236 (19%)
Query: 139 SVRSQICREIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHIL 195
+ R RE E+L ++ H ++VK + + + ++ EYM G L AH IL
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 196 SD-----------------LARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFG 238
D +A Q+ SG+ YL + VHRD+ N L+ ++ VKI DFG
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 239 VS---------RILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSIL 289
+S R+ TM P I +M PE I + K+ D+WS GV +
Sbjct: 179 MSRDVYSTDYYRVGGHTMLP-------IRWMPPESI----MYRKFTT-ESDVWSFGVILW 226
Query: 290 E-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSR 344
E F G+ P+ Q ++ I + E P + +E D + C Q++P R
Sbjct: 227 EIFTYGKQPWF---QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQR 279
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG+G G V R+ P + A+K + + + R E I+ +HPN++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSGLAYLHKRKIVHRD 218
+ ++ + ++ EYM+ GSL+ + + + + R + +G+ YL VHRD
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD 149
Query: 219 IKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKYD 275
+ N+LINS+ K++DFG+SR+L + + G I + +PE I K+
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI----AFRKFT 205
Query: 276 GYAGDIWSLGVSILE 290
A D+WS G+ + E
Sbjct: 206 S-ASDVWSYGIVMWE 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 46/278 (16%)
Query: 104 GNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
G +G G G T + + A+K++ N S + E +L+ VNHP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI------------------------ 194
V+K + ++G + +++EY GSL G +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 195 ----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
L A Q+ G+ YL + K+VHRD+ N+L+ + +KI+DFG+SR + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 251 NSAVGTI--AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWA 307
+ G I +M+ E + + + D+WS GV + E LG P+ G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQ-----SDVWSFGVLLWEIVTLGGNPYP----GIPP 258
Query: 308 SLMFAIC-FAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+F + E P+ S E + +C +++P R
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 46/278 (16%)
Query: 104 GNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
G +G G G T + + A+K++ N S + E +L+ VNHP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI------------------------ 194
V+K + ++G + +++EY GSL G +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 195 ----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
L A Q+ G+ YL + K+VHRD+ N+L+ + +KI+DFG+SR + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 251 NSAVGTI--AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWA 307
+ G I +M+ E + + + D+WS GV + E LG P+ G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQ-----SDVWSFGVLLWEIVTLGGNPYP----GIPP 258
Query: 308 SLMFAIC-FAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+F + E P+ S E + +C +++P R
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 143 QICREIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILS 196
+ +E + + ++HP +VK + + + I ++ EY+ G L G + +L
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL- 107
Query: 197 DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT 256
++ V G+A+L + +HRD+ N L++ VK++DFG++R + D S+VGT
Sbjct: 108 EMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGT 165
Query: 257 ---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFA 312
+ + +PE ++ KY D+W+ G+ + E F LG+ P+ + + ++
Sbjct: 166 KFPVKWSAPEV----FHYFKYSS-KSDVWAFGILMWEVFSLGKMPYDLYTNSE---VVLK 217
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLL 351
+ P +AS + C + P R QLL
Sbjct: 218 VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+ +++G G+ G+V + P T + A+K + + D R REI+IL+ ++
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHS 67
Query: 157 PNVVKCHDMYDRNG--EIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGLAY 208
+VK + G E+ +++EY+ G L R L D +R Q+ G+ Y
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQICKGMEY 126
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERI 265
L R+ VHRD+ N+L+ S +VKIADFG++++L D I + +PE +
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFY 292
+ ++ + D+WS GV + E +
Sbjct: 187 SDNIFSRQ-----SDVWSFGVVLYELF 208
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV--NHPNVVK--C 162
+G G G VWR + S A+K+ E S RE EI V H N++
Sbjct: 16 VGKGRYGEVWRGLWHGES--VAVKIFSSRDEQS----WFRETEIYNTVLLRHDNILGFIA 69
Query: 163 HDMYDRNGEIEVLL--EYMDGGSLEGAHIRQE---HILSDLARQVLSGLAYLH------- 210
DM RN ++ L Y + GSL RQ H+ LA GLA+LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 211 -KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC----NSAVGTIAYMSPERI 265
K I HRD K N+L+ S+ IAD G++ + +Q D N VGT YM+PE +
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 266 NTDLNHGKYDGYA-GDIWSLGVSILEF 291
+ + ++ Y DIW+ G+ + E
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 48/249 (19%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
+G G G V+ + +A+K I + + R ++ RE++ L + HP +V+ + +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 167 DRNGEIEVLL---------------------EYMDGGSLEGAHIRQEHILSDLARQVLSG 205
E L ++M+G R+ + + Q+
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEA 130
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ------TMDPC------NSA 253
+ +LH + ++HRD+KPSN+ VK+ DFG+ + Q + P
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ-----GDWAS 308
VGT YMSPE+I HG + DI+SLG+ + E +PF+ + D +
Sbjct: 191 VGTKLYMSPEQI-----HGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRN 242
Query: 309 LMFAICFAQ 317
L F F Q
Sbjct: 243 LKFPPLFTQ 251
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
IG+GS G V++ + + A+K V+ G + RE++I+R ++H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 166 YDRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKR 212
+ +GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 213 KIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDY 200
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 201 TS----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 46/278 (16%)
Query: 104 GNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPN 158
G +G G G T + + A+K++ N S + E +L+ VNHP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI------------------------ 194
V+K + ++G + +++EY GSL G +
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 195 ----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
L A Q+ G+ YL + +VHRD+ N+L+ + +KI+DFG+SR + +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 251 NSAVGTI--AYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWA 307
+ G I +M+ E + + + D+WS GV + E LG P+ G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQ-----SDVWSFGVLLWEIVTLGGNPYP----GIPP 258
Query: 308 SLMFAIC-FAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+F + E P+ S E + +C +++P R
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 55/275 (20%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEI-LRDVNHPNVVKCHDM 165
+G G G V ++ + T FALK++ +D +++ RE+E+ R P++V+ D+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML----QDCPKAR--REVELHWRASQCPHIVRIVDV 79
Query: 166 YDR----NGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAYLHKRKIV 215
Y+ + +++E +DGG L G E S++ + + + YLH I
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 216 HRDIKPSNLLINSSKN---VKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
HRD+KP NLL S + +K+ DFG ++ +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK--------------------------ETTGE 173
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWAS--LMFAICFAQ----PPEAPEMAS 326
KYD + D+WSLGV I+ L +P G S + I Q PE E+ S
Sbjct: 174 KYDK-SCDMWSLGV-IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-S 230
Query: 327 REFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
E + I L+ +P R + + HP+I+++ +
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 52/278 (18%)
Query: 107 IGSGSGGTVWRVVHP------PTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
IG G+ G V++ P P + V A+K++ +++ RE ++ + ++PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMV-AVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHILSDL--------------------- 198
K + + +L EYM G L E H + L
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 199 ------ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPC 250
ARQV +G+AYL +RK VHRD+ N L+ + VKIADFG+SR + A
Sbjct: 174 AEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWA--- 307
+ I +M PE I + +Y D+W+ GV + E F+ G Q +
Sbjct: 234 GNDAIPIRWMPPESI----FYNRYTT-ESDVWAYGVVLWEI------FSYGLQPYYGMAH 282
Query: 308 -SLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+++ + PE E + + C K P R
Sbjct: 283 EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 320
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 73
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 134 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 194 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 248
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 249 NCPDM----LLELMRMCWQYNPKMR 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIY----GNHEDSVRSQICREIEILR 152
L++ +G G G V + P T A+K + GNH ++ +EIEILR
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK----KEIEILR 78
Query: 153 DVNHPNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSG 205
++ H N+VK + +G I++++E++ GSL+ + ++ ++ A Q+ G
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 138
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSP 262
+ YL R+ VHRD+ N+L+ S VKI DFG+++ + + + + + +P
Sbjct: 139 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEF 291
E L K+ A D+WS GV++ E
Sbjct: 199 EC----LMQSKF-YIASDVWSFGVTLHEL 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 116
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI-----FG 230
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIY----GNHEDSVRSQICREIEILR 152
L++ +G G G V + P T A+K + GNH ++ +EIEILR
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK----KEIEILR 66
Query: 153 DVNHPNVVKCHDMYDRNGE--IEVLLEYMDGGSLEGAHIRQEHILS-----DLARQVLSG 205
++ H N+VK + +G I++++E++ GSL+ + ++ ++ A Q+ G
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 126
Query: 206 LAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSP 262
+ YL R+ VHRD+ N+L+ S VKI DFG+++ + + + + + +P
Sbjct: 127 MDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEF 291
E L K+ A D+WS GV++ E
Sbjct: 187 EC----LMQSKF-YIASDVWSFGVTLHEL 210
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
IG+GS G V++ + + A+K V+ G + RE++I+R ++H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 166 YDRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKR 212
+ +GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 213 KIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDY 200
Query: 272 GKYDGYAGDIWSLGVSILEFYLGR--FP 297
+ D+WS G + E LG+ FP
Sbjct: 201 TS----SIDVWSAGCVLAELLLGQPIFP 224
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 82
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 201
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 202 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 82
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 201
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 202 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 82
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 201
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 202 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 83
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 143
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 144 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 202
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 203 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDM 165
IG+GS G V++ + + A+K V+ G + RE++I+R ++H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 166 YDRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKR 212
+ +GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 213 KIVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNH 271
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDY 200
Query: 272 GKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 201 TS----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 94
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 213
Query: 273 KYDGYAGDIWSLGVSILEFYLGR--FP 297
+ D+WS G + E LG+ FP
Sbjct: 214 S----SIDVWSAGCVLAELLLGQPIFP 236
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 82
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 203 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 258 NCPDM----LFELMRMCWQYNPKMR 278
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 101
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 161
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 162 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 220
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 221 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 247
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 90
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 150
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 151 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 209
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 210 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 86
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 146
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 147 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 205
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 206 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 94
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYT 213
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 214 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ EL+K +GSG+ GTV++ + P A+KV+ N +I E +
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V P V + + ++++ + M G L H+R+ L + Q+
Sbjct: 73 MAGVGSPYVSRLLGIC-LTSTVQLVTQLMPYGCLLD-HVRENRGRLGSQDLLNWCMQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSP 262
G++YL ++VHRD+ N+L+ S +VKI DFG++R+L +T + I +M+
Sbjct: 131 GMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I + + D+WS GV++ E G P+
Sbjct: 191 ESILR-----RRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 82
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYT 201
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 202 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 95
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 155
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 156 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYT 214
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQG 304
+ D+WS G + E LG+ P G G
Sbjct: 215 S----SIDVWSAGCVLAELLLGQ-PIFPGDSG 241
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 87
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 147
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I ++
Sbjct: 148 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYT 206
Query: 273 KYDGYAGDIWSLGVSILEFYLGR--FP 297
+ D+WS G + E LG+ FP
Sbjct: 207 S----SIDVWSAGCVLAELLLGQPIFP 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 116
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI-----FG 230
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 110
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 170
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 171 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI-----FG 224
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFP 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 118
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 178
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 179 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI-----FG 232
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFP 260
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 120
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 180
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 181 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI-----FG 234
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFP 262
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHDMY 166
IG+GS G V++ + + A+K + + RE++I+R ++H N+V+ +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIVRLRYFF 161
Query: 167 DRNGE------IEVLLEYMDGGSLEGA--HIRQEHILSDL-----ARQVLSGLAYLHKRK 213
+GE + ++L+Y+ A + R + L + Q+ LAY+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 221
Query: 214 IVHRDIKPSNLLINSSKNV-KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
I HRDIKP NLL++ V K+ DFG ++ L + +P S + + Y +PE I G
Sbjct: 222 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI-----FG 275
Query: 273 KYDGYAG-DIWSLGVSILEFYLGR--FP 297
D + D+WS G + E LG+ FP
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFP 303
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 72 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 129
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 190 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 75 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 132
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 193 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 73 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 191 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 72 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGXLLD-YVREHKDNIGSQYLLNWCVQIAK 129
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 190 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 74 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 131
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 192 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+ +++G G+ G+V + P T + A+K + + D R REI+IL+ ++
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHS 83
Query: 157 PNVVKCHDMYDRNG--EIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGLAY 208
+VK + G + +++EY+ G L R L D +R Q+ G+ Y
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQICKGMEY 142
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERI 265
L R+ VHRD+ N+L+ S +VKIADFG++++L D I + +PE +
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFY 292
+ ++ + D+WS GV + E +
Sbjct: 203 SDNIFSRQ-----SDVWSFGVVLYELF 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+ +++G G+ G+V + P T + A+K + + D R REI+IL+ ++
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHS 71
Query: 157 PNVVKCHDMYDRNG--EIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGLAY 208
+VK + G + +++EY+ G L R L D +R Q+ G+ Y
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQICKGMEY 130
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERI 265
L R+ VHRD+ N+L+ S +VKIADFG++++L D I + +PE +
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFY 292
+ ++ + D+WS GV + E +
Sbjct: 191 SDNIFSRQ-----SDVWSFGVVLYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPP----TSRVFALKVIYGNHEDSVRSQICREIEILRDVNH 156
L+ +++G G+ G+V + P T + A+K + + D R REI+IL+ ++
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHS 70
Query: 157 PNVVKCHDMYDRNG--EIEVLLEYMDGGSLEGAHIRQEHILSDLAR------QVLSGLAY 208
+VK + G + +++EY+ G L R L D +R Q+ G+ Y
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQICKGMEY 129
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYMSPERI 265
L R+ VHRD+ N+L+ S +VKIADFG++++L D I + +PE +
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 266 NTDLNHGKYDGYAGDIWSLGVSILEFY 292
+ ++ + D+WS GV + E +
Sbjct: 190 SDNIFSRQ-----SDVWSFGVVLYELF 211
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 57/299 (19%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV---- 154
E + +IGSG G+V++ V ++A+K SV Q LR+V
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ-----NALREVYAHA 61
Query: 155 ---NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS--------DLARQVL 203
H +VV+ + + + + EY +GGSL A I+S DL QV
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 204 SGLAYLHKRKIVHRDIKPSNLLIN-----------------SSKNV--KIADFG-VSRIL 243
GL Y+H +VH DIKPSN+ I+ +S V KI D G V+RI
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 181
Query: 244 AQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ 303
+ ++ +S +++ E + + H DI++L ++++ G P R
Sbjct: 182 SPQVEEGDS-----RFLANEVLQENYTHLP----KADIFALALTVVX-AAGAEPLP--RN 229
Query: 304 GD-WASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
GD W I + P P++ S+EF + + + DP R A L++H +L A +
Sbjct: 230 GDQW----HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 81
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 202 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 257 NCPDM----LFELMRMCWQYNPKMR 277
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ----ICREIEI 150
+ EL+K +GSG GTV + V P + V ED Q + +
Sbjct: 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLS 204
+ ++H ++V+ + ++++ +Y+ GSL H+RQ +L + Q+
Sbjct: 69 IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD-HVRQHRGALGPQLLLNWGVQIAK 126
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL----AQTMDPCNSAVGTIAYM 260
G+ YL + +VHR++ N+L+ S V++ADFGV+ +L Q + + A I +M
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL--YSEAKTPIKWM 184
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPFA 299
+ E I + GKY + D+WS GV++ E G P+A
Sbjct: 185 ALESI----HFGKYT-HQSDVWSYGVTVWELMTFGAEPYA 219
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 75
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 136 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 196 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 251 NCPDM----LFELMRMCWQYNPKMR 271
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 88
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 209 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 264 NCPDM----LFELMRMCWQYNPKMR 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 82
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 203 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 258 NCPDM----LFELMRMCWQYNPKMR 278
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 57/299 (19%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV---- 154
E + +IGSG G+V++ V ++A+K SV Q LR+V
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ-----NALREVYAHA 65
Query: 155 ---NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS--------DLARQVL 203
H +VV+ + + + + EY +GGSL A I+S DL QV
Sbjct: 66 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 204 SGLAYLHKRKIVHRDIKPSNLLIN-----------------SSKNV--KIADFG-VSRIL 243
GL Y+H +VH DIKPSN+ I+ +S V KI D G V+RI
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 244 AQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ 303
+ ++ +S +++ E + + H DI++L ++++ G P R
Sbjct: 186 SPQVEEGDS-----RFLANEVLQENYTHLP----KADIFALALTVV-CAAGAEPLP--RN 233
Query: 304 GD-WASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
GD W I + P P++ S+EF + + + DP R A L++H +L A +
Sbjct: 234 GDQW----HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ----ICREIEI 150
+ EL+K +GSG GTV + V P + V ED Q + +
Sbjct: 27 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 86
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQE------HILSDLARQVLS 204
+ ++H ++V+ + ++++ +Y+ GSL H+RQ +L + Q+
Sbjct: 87 IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD-HVRQHRGALGPQLLLNWGVQIAK 144
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC--NSAVGTIAYMSP 262
G+ YL + +VHR++ N+L+ S V++ADFGV+ +L + A I +M+
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPFA 299
E I + GKY + D+WS GV++ E G P+A
Sbjct: 205 ESI----HFGKYT-HQSDVWSYGVTVWELMTFGAEPYA 237
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 57/299 (19%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV---- 154
E + +IGSG G+V++ V ++A+K SV Q LR+V
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ-----NALREVYAHA 63
Query: 155 ---NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS--------DLARQVL 203
H +VV+ + + + + EY +GGSL A I+S DL QV
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 204 SGLAYLHKRKIVHRDIKPSNLLIN-----------------SSKNV--KIADFG-VSRIL 243
GL Y+H +VH DIKPSN+ I+ +S V KI D G V+RI
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 244 AQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ 303
+ ++ +S +++ E + + H DI++L ++++ G P R
Sbjct: 184 SPQVEEGDS-----RFLANEVLQENYTHLP----KADIFALALTVV-CAAGAEPLP--RN 231
Query: 304 GD-WASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
GD W I + P P++ S+EF + + + DP R A L++H +L A +
Sbjct: 232 GDQW----HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 79
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 140 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 200 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 254
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 255 NCPDM----LFELMRMCWQYNPKMR 275
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 57/299 (19%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV---- 154
E + +IGSG G+V++ V ++A+K SV Q LR+V
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQ-----NALREVYAHA 63
Query: 155 ---NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILS--------DLARQVL 203
H +VV+ + + + + EY +GGSL A I+S DL QV
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 204 SGLAYLHKRKIVHRDIKPSNLLIN-----------------SSKNV--KIADFG-VSRIL 243
GL Y+H +VH DIKPSN+ I+ +S V KI D G V+RI
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 244 AQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ 303
+ ++ +S +++ E + + H DI++L ++++ G P R
Sbjct: 184 SPQVEEGDS-----RFLANEVLQENYTHLP----KADIFALALTVV-CAAGAEPLP--RN 231
Query: 304 GD-WASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFILRAGQ 361
GD W I + P P++ S+EF + + + DP R A L++H +L A +
Sbjct: 232 GDQW----HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 81
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MS
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 202 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 257 NCPDM----LFELMRMCWQYNPKMR 277
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 65
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLEYM-------DGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE M D + GA QE + QV
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQV 123
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 181
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 182 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 229
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 81 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 138
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 199 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 230
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 38/264 (14%)
Query: 107 IGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCHH 111
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVLS 204
VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +MSP
Sbjct: 172 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPPE 320
E L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 232 E----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
Query: 321 APEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 287 CPDM----LFELMRMCWQYNPKMR 306
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 74 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 131
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 192 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 74 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 131
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 192 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 73 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 191 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 74 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 131
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 192 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 96 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 153
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 214 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 78 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 135
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 196 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGXLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 68 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAE 125
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 186 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 73 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 191 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 147 EIEILRDVN-HPNVVK--CHDMYDR---------NGEIEVLLEYMDGGSLEGAHIRQEHI 194
EI++L + + HPNV++ C + DR N ++ L+E + E +++E+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD-ENLKLQKEYN 116
Query: 195 LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSK-------------NVKIADFGVSR 241
L RQ+ SG+A+LH KI+HRD+KP N+L+++S + I+DFG+ +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 242 IL----AQTMDPCNSAVGTIAYMSPERI--NTDLNHGKYDGYAGDIWSLGVSILEFYL-- 293
L + N+ GT + +PE + + +L + + DI+S+G +Y+
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF--YYILS 234
Query: 294 -GRFPFA--VGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQL 350
G+ PF R+ + +F++ + + + E D IS+ + DP R A ++
Sbjct: 235 KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA-EATDLISQMIDHDPLKRPTAMKV 293
Query: 351 LQHPFI 356
L+HP
Sbjct: 294 LRHPLF 299
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 77 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 134
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 195 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 77 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 136
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R +L + D ++
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 197 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 65 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 122
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 183 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 100
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 158
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 216
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 217 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 264
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 265 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSV----RSQICREIEI 150
++ E +K +GSG+ GTV++ + P + V ++ +I E +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 105 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 162
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 223 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 254
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 40/266 (15%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 88
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-------QEHILS--------DLARQV 202
+VV+ + + V++E M G L+ +++R +L+ +A ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLK-SYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYM 260
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +M
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQP 318
SPE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 208 SPE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 263 DNCPDM----LFELMRMCWQYNPKMR 284
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 75 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 132
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 193 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 224
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 61
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 119
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 177
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 178 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 225
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 226 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 113
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 171
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 229
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 230 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 277
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 278 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 80
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 138
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 196
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 197 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 244
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 245 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 73 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 191 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 80
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 138
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 196
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 197 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 244
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 245 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 81
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 139
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 197
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 198 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 245
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 246 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNHPNVVKCHDM 165
IG GS G V+ T + A+K + ED + + I REI IL + +++ +D+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 166 YD-----RNGEIEVLLEYMDGGSLE----GAHIRQEHILSDLARQVLSGLAYLHKRKIVH 216
+ E+ ++LE D + + +EHI + L +L G ++H+ I+H
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY-NLLLGENFIHESGIIH 152
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQTMD--------------PCN--------SAV 254
RD+KP+N L+N +VK+ DFG++R + D P N S V
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 255 GTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
T Y +PE I N+ K + DIWS G E
Sbjct: 213 VTRWYRAPELILLQENYTK----SIDIWSTGCIFAEL 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 40/266 (15%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 78
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-------ILS--------DLARQV 202
+VV+ + + V++E M G L+ +++R +L+ +A ++
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLK-SYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYM 260
G+AYL+ K VHRD+ N ++ VKI DFG++R + +T G + +M
Sbjct: 138 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQP 318
SPE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 198 SPE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 252
Query: 319 PEAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 253 DNCPDM----LFELMRMCWQYNPKMR 274
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 108
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 166
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 224
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 225 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 272
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 273 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 93
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 151
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 209
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 210 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 257
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 258 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 81
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 139
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 197
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 198 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 245
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 246 --RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 94
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 152
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 210
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 211 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 257
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 258 -QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 93
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 151
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 209
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 210 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 256
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 257 -QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 81
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 139
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 197
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 198 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 245
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 246 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 94
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 152
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 210
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 211 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 257
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 258 -QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 94
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 152
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 210
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 211 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 257
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 258 -QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 93
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 151
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 209
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 210 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 256
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 257 -QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 66
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 124
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 182
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 183 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 230
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 93
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 151
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 209
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 210 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 256
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 257 -QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 108
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 166
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 224
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 225 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 272
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 273 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 94
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 152
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 210
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 211 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 257
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 258 -QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 65
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 123
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 181
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 182 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 229
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 38/265 (14%)
Query: 106 RIGSGSGGTVWR------VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHP 157
+G GS G V+ V P +RV A+K + N S+R +I E ++++ N
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTV--NEAASMRERIEFLNEASVMKEFNCH 75
Query: 158 NVVKCHDMYDRNGEIEVLLEYMDGGSLEGA------HIRQEHILS--------DLARQVL 203
+VV+ + + V++E M G L+ + +L+ +A ++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMS 261
G+AYL+ K VHRD+ N + VKI DFG++R + +T G + +MS
Sbjct: 136 DGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEF-YLGRFPF-AVGRQGDWASLMFAICFAQPP 319
PE L G + Y+ D+WS GV + E L P+ + + +M +P
Sbjct: 196 PE----SLKDGVFTTYS-DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 320 EAPEMASREFRDFISRCLQKDPHSR 344
P+M + + C Q +P R
Sbjct: 251 NCPDM----LLELMRMCWQYNPKMR 271
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 26/263 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVR-----SQICREIEILRD 153
E++ +IG G G V + V A+K +I G+ E + RE+ I+ +
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGS-----LEGAHIRQEHILSDLARQVLSGLAY 208
+NHPN+VK + + + +++E++ G L+ AH + + L + G+ Y
Sbjct: 80 LNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 209 LHKRK--IVHRDIKPSNLLI-----NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
+ + IVHRD++ N+ + N+ K+ADFG+S+ Q++ + +G +M+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLGNFQWMA 194
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + Y A D +S + + G PF G + P
Sbjct: 195 PETIGAE--EESYTEKA-DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 322 PEMASREFRDFISRCLQKDPHSR 344
PE R+ I C DP R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 66
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 124
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 182
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 183 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 230
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 88
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 146
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 204
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 205 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 252
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 253 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 66
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 124
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 182
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 183 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 230
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 40/246 (16%)
Query: 147 EIEILRDVN-HPNVVK--CHDMYDR---------NGEIEVLLEYMDGGSLEGAHIRQEHI 194
EI++L + + HPNV++ C + DR N ++ L+E + E +++E+
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD-ENLKLQKEYN 116
Query: 195 LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSK-------------NVKIADFGVSR 241
L RQ+ SG+A+LH KI+HRD+KP N+L+++S + I+DFG+ +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 242 ILAQTMDP----CNSAVGTIAYMSPERI--NTDLNHGKYDGYAGDIWSLGVSILEFYL-- 293
L N+ GT + +PE + + +L + + DI+S+G +Y+
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF--YYILS 234
Query: 294 -GRFPFA--VGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQL 350
G+ PF R+ + +F++ + + + E D IS+ + DP R A ++
Sbjct: 235 KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA-EATDLISQMIDHDPLKRPTAMKV 293
Query: 351 LQHPFI 356
L+HP
Sbjct: 294 LRHPLF 299
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 64
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 122
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 180
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 181 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 228
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 229 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVR-----SQICREIEILRD 153
E++ +IG G G V + V A+K +I G+ E + RE+ I+ +
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGS-----LEGAHIRQEHILSDLARQVLSGLAY 208
+NHPN+VK + + + +++E++ G L+ AH + + L + G+ Y
Sbjct: 80 LNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 209 LHKRK--IVHRDIKPSNLLI-----NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
+ + IVHRD++ N+ + N+ K+ADFG S+ Q++ + +G +M+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLGNFQWMA 194
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + Y A D +S + + G PF G + P
Sbjct: 195 PETIGAE--EESYTEKA-DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 322 PEMASREFRDFISRCLQKDPHSR 344
PE R+ I C DP R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K + SG+ GTV++ + P A+K + +I E +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++++ M G L ++R+ L + Q+
Sbjct: 78 MASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 135
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 196 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 61
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 119
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 177
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + D + + F Q
Sbjct: 178 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFFRQ---- 225
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
S E + I CL P R ++ HP++
Sbjct: 226 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 99 AELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVI-------YGNHEDSVRSQICREIEIL 151
++ Q G +GSG G+V+ + + A+K + +G + R + E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR--VPMEVVLL 61
Query: 152 RDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQEHILSDLARQV 202
+ V+ V++ D ++R ++LE D + GA QE + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQV 119
Query: 203 LSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
L + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+ GT Y
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSP 177
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + +Y G + +WSLG+ + + G PF + + F
Sbjct: 178 PEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR--------- 224
Query: 322 PEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ S E + I CL P R ++ HP++
Sbjct: 225 -QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 73 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 130
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 191 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 78 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 135
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 196 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K +GSG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG +++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILR--DVNHPNVVKCH 163
R+G GS G V R+ T A+K VR ++ R E++ + P +V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLY 151
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + +E ++GGSL G ++++ L + Q L GL YLH R+I+H D
Sbjct: 152 GAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 219 IKPSNLLINS-SKNVKIADFGVSRI-----LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+K N+L++S + + DFG + L +++ + GT +M+PE + G
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL-----G 265
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPP--EAPEMASREFR 330
+ D+WS +L G P+ +G L I PP E P +
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG---PLCLKIASEPPPVREIPPSCAPLTA 322
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQI 371
I L+K+P R AA+L +VN+ L+Q+
Sbjct: 323 QAIQEGLRKEPIHRVSAAEL----------GGKVNRALQQV 353
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 135 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 194
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 255 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 135
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 196 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 81 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 140
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 141 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 201 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 135
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 196 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 74 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 133
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 134 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 194 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 77 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 136
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ +L +K VHRD+ N +++ VK+ADFG++R + + D ++
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 197 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 231
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 125 RVFALKVIYGN-HEDSV-RSQICREIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGG 182
R+ ALK+ D V R++ RE + P+VV HD + +G++ V ++G
Sbjct: 60 RIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGV 119
Query: 183 SLEGAHIRQEHILS-----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADF 237
L A +R++ L+ + RQ+ S L H HRD+KP N+L+++ + DF
Sbjct: 120 DL-AAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDF 178
Query: 238 GV-SRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRF 296
G+ S + + + VGT+ Y +PER + +H Y DI++L + E G
Sbjct: 179 GIASATTDEKLTQLGNTVGTLYYXAPERFSE--SHAT---YRADIYALTCVLYECLTGSP 233
Query: 297 PFAVGRQGDWASLMFA---ICFAQPPEAPEMASREFRDFISRCLQKDPHSRW 345
P+ QGD S+ A +P F I+R K+P R+
Sbjct: 234 PY----QGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXAKNPEDRY 281
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K + SG+ GTV++ + P A+K + +I E +
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 71 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 128
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 189 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 147 EIEILRDVN-HPNVVK--CHDMYDR---------NGEIEVLLEYMDGGSLEGAHIRQEHI 194
EI++L + + HPNV++ C + DR N ++ L+E + S E +++E+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV-SDENLKLQKEYN 134
Query: 195 LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSK-------------NVKIADFGVSR 241
L RQ+ SG+A+LH KI+HRD+KP N+L+++S + I+DFG+ +
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 242 ILAQTMDP----CNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYL---G 294
L N+ GT + +PE + + + + DI+S+G +Y+ G
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEE--STKRRLTRSIDIFSMGCVF--YYILSKG 250
Query: 295 RFPFA--VGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
+ PF R+ + +F++ + + + E D IS+ + DP R A ++L+
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA-EATDLISQMIDHDPLKRPTAMKVLR 309
Query: 353 HPFI 356
HP
Sbjct: 310 HPLF 313
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 95 LINPAELQKGNRIGSGSGGTVWRVVHPPTSRVF----ALKVIYGNHEDSVRSQICREIEI 150
++ E +K + SG+ GTV++ + P A+K + +I E +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 151 LRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQ------EHILSDLARQVLS 204
+ V++P+V + + ++++ + M G L ++R+ L + Q+
Sbjct: 78 MASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLD-YVREHKDNIGSQYLLNWCVQIAK 135
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSP 262
G+ YL R++VHRD+ N+L+ + ++VKI DFG++++L ++ G I +M+
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
E I H Y + D+WS GV++ E G P+
Sbjct: 196 ESI----LHRIYT-HQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 147 EIEILRDVN-HPNVVK--CHDMYDR---------NGEIEVLLEYMDGGSLEGAHIRQEHI 194
EI++L + + HPNV++ C + DR N ++ L+E + S E +++E+
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV-SDENLKLQKEYN 134
Query: 195 LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSK-------------NVKIADFGVSR 241
L RQ+ SG+A+LH KI+HRD+KP N+L+++S + I+DFG+ +
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 242 ILAQTMDP----CNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYL---G 294
L N+ GT + +PE + + + + DI+S+G +Y+ G
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEE--STKRRLTRSIDIFSMGCVF--YYILSKG 250
Query: 295 RFPFA--VGRQGDWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
+ PF R+ + +F++ + + + E D IS+ + DP R A ++L+
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIA-EATDLISQMIDHDPLKRPTAMKVLR 309
Query: 353 HPFI 356
HP
Sbjct: 310 HPLF 313
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILR--DVNHPNVVKCH 163
R+G GS G V R+ T A+K VR ++ R E++ + P +V +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLY 132
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + +E ++GGSL G ++++ L + Q L GL YLH R+I+H D
Sbjct: 133 GAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 219 IKPSNLLINS-SKNVKIADFGVSRI-----LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+K N+L++S + + DFG + L + + + GT +M+PE + G
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL-----G 246
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPP--EAPEMASREFR 330
+ D+WS +L G P+ +G L I PP E P +
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG---PLCLKIASEPPPVREIPPSCAPLTA 303
Query: 331 DFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQI 371
I L+K+P R AA+L +VN+ L+Q+
Sbjct: 304 QAIQEGLRKEPIHRVSAAEL----------GGKVNRALQQV 334
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 124 YLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 184 TEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 238
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 239 GVLLWEIFTLGGSPY 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALK-VIYGNHEDSVR-----SQICREIEILRD 153
E++ +IG G G V + V A+K +I G+ E + RE+ I+ +
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 154 VNHPNVVKCHDMYDRNGEIEVLLEYMDGGS-----LEGAHIRQEHILSDLARQVLSGLAY 208
+NHPN+VK + + + +++E++ G L+ AH + + L + G+ Y
Sbjct: 80 LNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 209 LHKRK--IVHRDIKPSNLLI-----NSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMS 261
+ + IVHRD++ N+ + N+ K+ADF +S+ Q++ + +G +M+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLGNFQWMA 194
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMFAICFAQPPEA 321
PE I + Y A D +S + + G PF G + P
Sbjct: 195 PETIGAE--EESYTEKA-DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 322 PEMASREFRDFISRCLQKDPHSR 344
PE R+ I C DP R
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
+N EL+ IG G G V ++ A+K I D+ E ++ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI---KNDATAQAFLAEASVMTQLR 57
Query: 156 HPNVVKCHD-MYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
H N+V+ + + G + ++ EYM GSL G + L + V + Y
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
L VHRD+ N+L++ K++DFG+++ + T D V + +PE +
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALRE- 173
Query: 269 LNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
K D+WS G+ + E Y GR P+
Sbjct: 174 ----KKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
+N EL+ IG G G V ++ A+K I D+ E ++ +
Sbjct: 9 LNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI---KNDATAQAFLAEASVMTQLR 63
Query: 156 HPNVVKCHD-MYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
H N+V+ + + G + ++ EYM GSL G + L + V + Y
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
L VHRD+ N+L++ K++DFG+++ + T D V + +PE +
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREA 180
Query: 269 LNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
K D+WS G+ + E Y GR P+
Sbjct: 181 AFSTK-----SDVWSFGILLWEIYSFGRVPY 206
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
+N EL+ IG G G V ++ A+K I D+ E ++ +
Sbjct: 18 LNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI---KNDATAQAFLAEASVMTQLR 72
Query: 156 HPNVVKCHD-MYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
H N+V+ + + G + ++ EYM GSL G + L + V + Y
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
L VHRD+ N+L++ K++DFG+++ + T D V + +PE +
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREK 189
Query: 269 LNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
K D+WS G+ + E Y GR P+
Sbjct: 190 KFSTK-----SDVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 96 INPAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVN 155
+N EL+ IG G G V ++ A+K I D+ E ++ +
Sbjct: 190 LNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI---KNDATAQAFLAEASVMTQLR 244
Query: 156 HPNVVKCHD-MYDRNGEIEVLLEYMDGGSL------EGAHIRQEHILSDLARQVLSGLAY 208
H N+V+ + + G + ++ EYM GSL G + L + V + Y
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 209 LHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTD 268
L VHRD+ N+L++ K++DFG+++ + T D V + +PE +
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREK 361
Query: 269 LNHGKYDGYAGDIWSLGVSILEFY-LGRFPF 298
K D+WS G+ + E Y GR P+
Sbjct: 362 KFSTK-----SDVWSFGILLWEIYSFGRVPY 387
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
N+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 NTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 94/343 (27%)
Query: 104 GNRIGSGSGGTVWRVVHPPTSRVFALKVI-----YGNHEDSVRSQICREIEILRDVNHPN 158
G +G+GS G V V + + FALK + Y N RE++I++ ++H N
Sbjct: 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN----------RELDIMKVLDHVN 61
Query: 159 VVKCHDMYDRNGEIE--------------------------------------VLLEYMD 180
++K D + G+ E V++EY+
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 181 GG--SLEGAHIRQ-----EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKN-V 232
+ + IR +++S Q+ + ++H I HRDIKP NLL+NS N +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 233 KIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFY 292
K+ DFG ++ L + +P + + + Y +PE + L +Y + D+WS+G E
Sbjct: 182 KLCDFGSAKKLIPS-EPSVAXICSRFYRAPELM---LGATEYTP-SIDLWSIGCVFGELI 236
Query: 293 LGRFPFAVGRQGDWASLMFAICFAQPPEA-------------PEMASREFR--------- 330
LG+ F+ D + I E P + ++++R
Sbjct: 237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS 296
Query: 331 ---DFISRCLQKDPHSRWPAAQLLQHPFI--LR-AGQSQVNQN 367
D + + L+ +P R + + HPF LR + +S+V N
Sbjct: 297 LAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNN 339
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 72
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 73 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 131
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 192 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 230
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 35/281 (12%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSL---------EGAHIRQEHILSDL------ 198
+H NVV + G + V++E+ G+L E + E + D
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC--NSA 253
+ QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D A
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFA 312
+ +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 211 RLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EEFCRR 263
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 75 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 134
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 195 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 81
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 138
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 199 MAPE----SLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P+ R
Sbjct: 254 PDNCPERVT----DLMRMCWQFNPNMR 276
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 62
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 63 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 182 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 100 ELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV--NHP 157
++Q +IG G G VW + A+KV + E S RE EI + V H
Sbjct: 38 QIQMVKQIGKGRYGEVW--MGKWRGEKVAVKVFFTTEEAS----WFRETEIYQTVLMRHE 91
Query: 158 NVVK--CHDMYDRNG--EIEVLLEYMDGGSL----EGAHIRQEHILSDLARQVLSGLAYL 209
N++ D+ ++ ++ +Y + GSL + + + +L LA +SGL +L
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK-LAYSSVSGLCHL 150
Query: 210 H--------KRKIVHRDIKPSNLLINSSKNVKIADFGVS-RILAQTMD---PCNSAVGTI 257
H K I HRD+K N+L+ + IAD G++ + ++ T + P N+ VGT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 258 AYMSPERINTDLNHGKYDGY-AGDIWSLGVSILE 290
YM PE ++ LN + Y D++S G+ + E
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 72
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 73 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 131
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 192 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 68 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 127
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 128 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 188 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 62
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 63 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 182 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 78
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 135
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 196 MAPE----SLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 250
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P R
Sbjct: 251 PDNCPERVT----DLMRMCWQFNPKMR 273
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 105 NRI-GSGSGGTVWRVV---HPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
NRI G G G V+ V H A+K + + + E I+++++HP++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIV 215
K + + +++E G L R ++ L L + Q+ +AYL V
Sbjct: 89 KLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGK 273
HRDI N+L+ S + VK+ DFG+SR + + D ++V I +MSPE IN +
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF-----R 201
Query: 274 YDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
A D+W V + E G+ PF D ++ P++
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPKPDLCPPVLYTL 258
Query: 333 ISRCLQKDPHSR 344
++RC DP R
Sbjct: 259 MTRCWDYDPSDR 270
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 40/229 (17%)
Query: 98 PAELQKGNRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQ-ICREIEILRDVNH 156
P + + IG GS G V+ ++ A+K + ED + + I REI IL +
Sbjct: 27 PDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 86
Query: 157 PNVVKCHDMYD-----RNGEIEVLLEYMDGGSLE----GAHIRQEHILSDLARQVLSGLA 207
+++ HD+ + E+ ++LE D + + ++H+ + L +L G
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILY-NLLLGEK 145
Query: 208 YLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMD-----------------PC 250
++H+ I+HRD+KP+N L+N +VKI DFG++R + D P
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 251 N--------SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
N S V T Y +PE I N+ + DIWS G E
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTN----SIDIWSTGCIFAEL 250
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEXSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 189 IRQEHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMD 248
I E ++S + QV G+ +L RK +HRD+ N+L++ + VKI DFG++R + + D
Sbjct: 196 ITMEDLIS-YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD 254
Query: 249 PCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF-AVGRQG 304
+ +M+PE I + K D+WS GV + E F LG P+ V
Sbjct: 255 YVRKGDTRLPLKWMAPESIFDKIYSTK-----SDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 305 DWASLMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
D+ S + APE ++ E + C +DP R A+L++
Sbjct: 310 DFCSRLRE---GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + PT R A+K++ S + E++IL +
Sbjct: 29 LKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIG 88
Query: 155 NHPNVVKCHDMYDRN-GEIEVLLEYMDGGSL 184
+H NVV + G + V++EY G+L
Sbjct: 89 HHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 81
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 138
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 199 MAPE----SLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P R
Sbjct: 254 PDNCPERVT----DLMRMCWQFNPKMR 276
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 49 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 108
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 109 YLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 223
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 224 GVLLWEIFTLGGSPY 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 57 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 116
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 117 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 176
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 177 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 231
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 232 GVLLWEIFTLGGSPY 246
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 95 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 154
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 155 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 215 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 249
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 53 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 112
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 113 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 172
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 173 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 227
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 228 GVLLWEIFTLGGSPY 242
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 66
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 67 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 125
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 186 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 62
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 63 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 182 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 220
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 135
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 196 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 230
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 124 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 238
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 239 GVLLWEIFTLGGSPY 253
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 73 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 132
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 133 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 193 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 227
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 71 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 130
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 191 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 225
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 56 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 115
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 116 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 175
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 176 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 230
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 231 GVLLWEIFTLGGSPY 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 105 NRI-GSGSGGTVWRVV---HPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
NRI G G G V+ V H A+K + + + E I+++++HP++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIV 215
K + + +++E G L R ++ L L + Q+ +AYL V
Sbjct: 73 KLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGK 273
HRDI N+L+ S + VK+ DFG+SR + + D ++V I +MSPE IN +
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF-----R 185
Query: 274 YDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
A D+W V + E G+ PF D ++ P++
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPKPDLCPPVLYTL 242
Query: 333 ISRCLQKDPHSR 344
++RC DP R
Sbjct: 243 MTRCWDYDPSDR 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 74 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 133
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 134 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 194 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 124 YLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 238
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 239 GVLLWEIFTLGGSPY 253
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 105 NRI-GSGSGGTVWRVV---HPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVV 160
NRI G G G V+ V H A+K + + + E I+++++HP++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSDL-----ARQVLSGLAYLHKRKIV 215
K + + +++E G L R ++ L L + Q+ +AYL V
Sbjct: 77 KLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 216 HRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGK 273
HRDI N+L+ S + VK+ DFG+SR + + D ++V I +MSPE IN +
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINF-----R 189
Query: 274 YDGYAGDIWSLGVSILEFY-LGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDF 332
A D+W V + E G+ PF D ++ P++
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPKPDLCPPVLYTL 246
Query: 333 ISRCLQKDPHSR 344
++RC DP R
Sbjct: 247 MTRCWDYDPSDR 258
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 95 LINPAELQKGNRIGSGSGGTV----WRVVHPPTSRVFALKVIYGN--HEDSVRSQICREI 148
LI +L+ ++G GS G V W T V A+K + + + RE+
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREV 66
Query: 149 EILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGSL-EGAHIRQEHIL----SDLARQVL 203
+ ++H N+++ + + ++++ E GSL + Q H L S A QV
Sbjct: 67 NAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 125
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC---NSAVGTIAYM 260
G+ YL ++ +HRD+ NLL+ + VKI DFG+ R L Q D A+
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 261 SPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQG 304
+PE + T + +A D W GV++ E F G+ P+ +G G
Sbjct: 186 APESLKT-----RTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNG 224
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 279
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 280 GVLLWEIFTLGGSPY 294
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 128 ALKVIYGNHEDSVRSQICREIEILRDV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEG 186
A+K++ + + S + E+E+++ + H N++ ++G + V++EY G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 187 ----------------AHIRQEHI----LSDLARQVLSGLAYLHKRKIVHRDIKPSNLLI 226
+H +E + L A QV G+ YL +K +HRD+ N+L+
Sbjct: 124 YLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 227 NSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSL 284
+KIADFG++R + + G + +M+PE + + + D+WS
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSF 238
Query: 285 GVSILE-FYLGRFPF 298
GV + E F LG P+
Sbjct: 239 GVLLWEIFTLGGSPY 253
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 94 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 153
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 154 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 214 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 248
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 75 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 134
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 194
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 195 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 142 SQICREIEILRDVNHPNVVKCHDMYDRN-GEIEVLLEYMDGGSLEGAHIRQEH--ILSDL 198
SQ E I++D +HPNV+ + R+ G V+L YM G L + H + DL
Sbjct: 76 SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 135
Query: 199 ---ARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSR-ILAQTMDPCNSAV 254
QV G+ YL +K VHRD+ N +++ VK+ADFG++R + + ++
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 255 GT---IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF 291
G + +M+ E + T K D+WS GV + E
Sbjct: 196 GAKLPVKWMALESLQTQKFTTK-----SDVWSFGVLLWEL 230
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK--C 162
++G G V V +ALK I HE R + RE ++ R NHPN+++
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRIL-CHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 163 HDMYDRNGEIE--VLLEYMDGGSL---------EGAHIRQEHILSDLARQVLSGLAYLHK 211
+ + +R + E +LL + G+L +G + ++ IL L + GL +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-LLLGICRGLEAIHA 152
Query: 212 RKIVHRDIKPSNLLINSSKNVKIADFGVSRIL---------AQTMDPCNSAVGTIAYMSP 262
+ HRD+KP+N+L+ + D G A T+ + TI+Y +P
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF-AVGRQGDWASLMFAICFAQPPEA 321
E + +H D D+WSLG + G P+ V ++GD +L + P++
Sbjct: 213 ELFSVQ-SHCVIDERT-DVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS-IPQS 269
Query: 322 PEMASREFRDFISRCLQKDPHSR 344
P +S ++ ++ + DPH R
Sbjct: 270 PRHSSALWQ-LLNSMMTVDPHQR 291
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 81
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 138
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 199 MAPE----SLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P R
Sbjct: 254 PDNCPERVT----DLMRMCWQFNPKMR 276
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 142 SQICREIEILRDVN--HPNVVKCHDMYDRNGEIEVLLE-------YMDGGSLEGAHIRQE 192
+++ E+ +L+ V+ V++ D ++R ++LE D + GA QE
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE 156
Query: 193 HILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSK-NVKIADFGVSRILAQTMDPCN 251
+ QVL + + H ++HRDIK N+LI+ ++ +K+ DFG +L T+
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YT 214
Query: 252 SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMF 311
GT Y PE I + +Y G + +WSLG+ + + G PF + D +
Sbjct: 215 DFDGTRVYSPPEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRG 266
Query: 312 AICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQHPFI 356
+ F Q S E + I CL P R ++ HP++
Sbjct: 267 QVFFRQ------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 207 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 259
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 101 LQKGNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G+G+ G T + ++ + A+K++ + + R + E+++L +
Sbjct: 41 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 100
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA--HIRQEHILS---------------- 196
NH N+V G V+ EY G L R I S
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 197 ----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
+ QV G+A+L + +HRD+ N+L+ + KI DFG++R + +
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
+A + +M+PE I + + D+WS G+ + E F LG P+ G D +
Sbjct: 221 GNARLPVKWMAPESIFNCVY-----TFESDVWSYGIFLWELFSLGSSPYP-GMPVD-SKF 273
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
I +PE A E D + C DP R Q++Q
Sbjct: 274 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 78 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 135
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI----NYYKF 191
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 192 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 247
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 248 NLCWTYDVENR 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 101 LQKGNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G+G+ G T + ++ + A+K++ + + R + E+++L +
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA--HIRQEHILS---------------- 196
NH N+V G V+ EY G L R I S
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 197 ----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
+ QV G+A+L + +HRD+ N+L+ + KI DFG++R + +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
+A + +M+PE I + + D+WS G+ + E F LG P+ G D +
Sbjct: 228 GNARLPVKWMAPESIFNCVY-----TFESDVWSYGIFLWELFSLGSSPYP-GMPVD-SKF 280
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
I +PE A E D + C DP R Q++Q
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 101 LQKGNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G+G+ G T + ++ + A+K++ + + R + E+++L +
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA--HIRQEHILS---------------- 196
NH N+V G V+ EY G L R I S
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 197 ----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
+ QV G+A+L + +HRD+ N+L+ + KI DFG++R + +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
+A + +M+PE I + + D+WS G+ + E F LG P+ G D +
Sbjct: 228 GNARLPVKWMAPESIFNCVY-----TFESDVWSYGIFLWELFSLGSSPYP-GMPVD-SKF 280
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
I +PE A E D + C DP R Q++Q
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 198 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 250
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVF--ALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G+ G+V + V+ + A+KV+ E + ++ RE +I+ +++P +V+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHI-RQEHI----LSDLARQVLSGLAYLHKRKIVHRDI 219
+ + +++E GG L + ++E I +++L QV G+ YL ++ VHRD+
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT----IAYMSPERINTDLNHGKYD 275
N+L+ + KI+DFG+S+ L D +A + + +PE IN +
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPECINFRKFSSR-- 193
Query: 276 GYAGDIWSLGVSILE 290
D+WS GV++ E
Sbjct: 194 ---SDVWSYGVTMWE 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 207 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 259
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 92 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 149
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 205
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 206 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 261
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 262 NLCWTYDVENR 272
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------E 192
+H NVV + G + V++E+ G+L ++R E
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 193 HILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
H++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 149 HLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 208 GDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EEF 260
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 101 LQKGNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G+G+ G T + ++ + A+K++ + + R + E+++L +
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA--HIRQEHILS---------------- 196
NH N+V G V+ EY G L R I S
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 197 ----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
+ QV G+A+L + +HRD+ N+L+ + KI DFG++R + +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
+A + +M+PE I + + D+WS G+ + E F LG P+ G D +
Sbjct: 205 GNARLPVKWMAPESIFNCVY-----TFESDVWSYGIFLWELFSLGSSPYP-GMPVD-SKF 257
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
I +PE A E D + C DP R Q++Q
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 101 LQKGNRIGSGSGG-----TVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G+G+ G T + ++ + A+K++ + + R + E+++L +
Sbjct: 43 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 102
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGA--HIRQEHILS---------------- 196
NH N+V G V+ EY G L R I S
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 197 ----DLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC-- 250
+ QV G+A+L + +HRD+ N+L+ + KI DFG++R + +
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 251 NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASL 309
+A + +M+PE I + + D+WS G+ + E F LG P+ G D +
Sbjct: 223 GNARLPVKWMAPESIFNCVY-----TFESDVWSYGIFLWELFSLGSSPYP-GMPVD-SKF 275
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
I +PE A E D + C DP R Q++Q
Sbjct: 276 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 94 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 151
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAV---GTIAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 207
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 208 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 263
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 264 NLCWTYDVENR 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 94 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 151
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAV---GTIAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 207
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 208 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 263
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 264 NLCWTYDVENR 274
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 437 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 494
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 550
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 551 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 606
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 607 NLCWTYDVENR 617
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 436 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 493
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 549
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 550 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 605
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 606 NLCWTYDVENR 616
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 78 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 135
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 191
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 192 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 247
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 248 NLCWTYDVENR 258
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ------------------EHIL 195
+H NVV + G + V++E+ G+L ++R EH++
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 196 SDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC--NSA 253
+ QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D A
Sbjct: 148 C-YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFA 312
+ +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 207 RLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EEFCRR 259
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 84 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 141
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 197
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 198 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 253
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 254 NLCWTYDVENR 264
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 72 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 129
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 185
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 186 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 241
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 242 NLCWTYDVENR 252
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 80
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 137
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 138 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 198 MAPE----SLKDGVFT-TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 252
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P R
Sbjct: 253 PDNCPERVT----DLMRMCWQFNPKMR 275
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ------------------EHIL 195
+H NVV + G + V++E+ G+L ++R EH++
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 196 SDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC--NSA 253
+ QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D A
Sbjct: 148 X-YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 254 VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFA 312
+ +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 207 RLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EEFXRR 259
Query: 313 ICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 106 RIGSGSGGTVWRVVHP-PTSRVFALKVIYGNHED--SVRSQICREIEILRDVNHPNVVKC 162
+GSG+ GTV + + I N + +++ ++ E +++ +++P +V+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 163 HDMYDRNGEIEVLLEYMDGGSL-----EGAHIRQEHILSDLARQVLSGLAYLHKRKIVHR 217
+ + + +++E + G L + H++ ++I+ +L QV G+ YL + VHR
Sbjct: 74 IGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLEESNFVHR 131
Query: 218 DIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT---IAYMSPERINTDLNHGKY 274
D+ N+L+ + KI+DFG+S+ L + + + + +PE I N+ K+
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----NYYKF 187
Query: 275 DGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRDFI 333
D+WS GV + E F G+ P+ G +G + M + P RE D +
Sbjct: 188 SS-KSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEK--GERMGCPAGCPREMYDLM 243
Query: 334 SRCLQKDPHSR 344
+ C D +R
Sbjct: 244 NLCWTYDVENR 254
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 81
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 138
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHRD+ N ++ VKI DFG++R + +T G + +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 199 MAPE----SLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P R
Sbjct: 254 PDNCPERVT----DLMRMCWQFNPKMR 276
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 148 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 207 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 259
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 150 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 209 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 261
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 262 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 125
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V++E+ G+L ++R
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 185 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 244 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 296
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V+ E+ G+L ++R
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 198 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 250
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G G V P + A+K++ + + S + E+E+++
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 200
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 261 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV--NHPNVVK--C 162
+G G G VWR A+K+ E S RE E+ V H N++
Sbjct: 16 VGKGRYGEVWR--GSWQGENVAVKIFSSRDEKS----WFRETELYNTVMLRHENILGFIA 69
Query: 163 HDMYDRNGEIEVLL--EYMDGGSL-EGAHIRQEHILSDL--ARQVLSGLAYLH------- 210
DM R+ ++ L Y + GSL + + +S L + SGLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 211 -KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC----NSAVGTIAYMSPERI 265
K I HRD+K N+L+ + IAD G++ + +Q+ + N VGT YM+PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 266 NTDLNHGKYDGYAG-DIWSLGV------------SILEFYLGRFPFAVGRQGDWASLMFA 312
+ + +D Y DIW+ G+ I+E Y F V + +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249
Query: 313 ICFAQPPEAPEMASREFRD--------FISRCLQKDPHSRWPAAQL 350
+C Q + P + +R F D + C ++P +R A ++
Sbjct: 250 VCVDQ--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 125/325 (38%), Gaps = 87/325 (26%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
++G G TVW + A+K++ G D V ++ EI++L+ VN + K
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHI----------------RQEH------ILSDLARQV 202
M I LL++ + G H+ + EH + +++Q+
Sbjct: 83 M--GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 203 LSGLAYLHKR-KIVHRDIKPSNLL---INSSKN---VKIADFGVSRILAQTMDPCNSAVG 255
L GL Y+H+R I+H DIKP N+L ++S +N +KIAD G + + +++
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQ 197
Query: 256 TIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF------------------------ 291
T Y SPE + G G DIWS I E
Sbjct: 198 TREYRSPEVL-----LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 292 ---YLGRFPFAVGRQGDWASLMF-----------------AICFAQPPEAPEMASREFRD 331
LG P + R G + F + + + ++E D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
F+S LQ DP R A L+ HP++
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV--NHPNVVK--C 162
+G G G VWR A+K+ E S RE E+ V H N++
Sbjct: 16 VGKGRYGEVWR--GSWQGENVAVKIFSSRDEKS----WFRETELYNTVMLRHENILGFIA 69
Query: 163 HDMYDRNGEIEVLL--EYMDGGSL-EGAHIRQEHILSDL--ARQVLSGLAYLH------- 210
DM R+ ++ L Y + GSL + + +S L + SGLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 211 -KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC----NSAVGTIAYMSPERI 265
K I HRD+K N+L+ + IAD G++ + +Q+ + N VGT YM+PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 266 NTDLNHGKYDGYAG-DIWSLGV------------SILEFYLGRFPFAVGRQGDWASLMFA 312
+ + +D Y DIW+ G+ I+E Y F V + +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249
Query: 313 ICFAQPPEAPEMASREFRD--------FISRCLQKDPHSRWPAAQL 350
+C Q + P + +R F D + C ++P +R A ++
Sbjct: 250 VCVDQ--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 125/325 (38%), Gaps = 87/325 (26%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR-EIEILRDVNHPNVVKCHD 164
++G G TVW + A+K++ G D V ++ EI++L+ VN + K
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHI----------------RQEH------ILSDLARQV 202
M I LL++ + G H+ + EH + +++Q+
Sbjct: 83 M--GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 203 LSGLAYLHKR-KIVHRDIKPSNLL---INSSKN---VKIADFGVSRILAQTMDPCNSAVG 255
L GL Y+H+R I+H DIKP N+L ++S +N +KIAD G + + +++
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQ 197
Query: 256 TIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEF------------------------ 291
T Y SPE + G G DIWS I E
Sbjct: 198 TREYRSPEVL-----LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 292 ---YLGRFPFAVGRQGDWASLMF-----------------AICFAQPPEAPEMASREFRD 331
LG P + R G + F + + + ++E D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 332 FISRCLQKDPHSRWPAAQLLQHPFI 356
F+S LQ DP R A L+ HP++
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G G V P + A+K++ + + S + E+E+++
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 141
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 202 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 107 IGSGSGGTVWRVVHPPTSRVF--ALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
+G G+ G+V + V+ + A+KV+ E + ++ RE +I+ +++P +V+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHI-RQEHI----LSDLARQVLSGLAYLHKRKIVHRDI 219
+ + +++E GG L + ++E I +++L QV G+ YL ++ VHR++
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNL 462
Query: 220 KPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT----IAYMSPERINTDLNHGKYD 275
N+L+ + KI+DFG+S+ L D +A + + +PE IN +
Sbjct: 463 AARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPECINFRKFSSR-- 519
Query: 276 GYAGDIWSLGVSILE 290
D+WS GV++ E
Sbjct: 520 ---SDVWSYGVTMWE 531
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 50/286 (17%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV--NHPNVVK--C 162
+G G G VWR A+K+ E S RE E+ V H N++
Sbjct: 45 VGKGRYGEVWR--GSWQGENVAVKIFSSRDEKS----WFRETELYNTVMLRHENILGFIA 98
Query: 163 HDMYDRNGEIEVLL--EYMDGGSL-EGAHIRQEHILSDL--ARQVLSGLAYLH------- 210
DM R+ ++ L Y + GSL + + +S L + SGLA+LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 211 -KRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC----NSAVGTIAYMSPERI 265
K I HRD+K N+L+ + IAD G++ + +Q+ + N VGT YM+PE +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 266 NTDLNHGKYDGYAG-DIWSLGV------------SILEFYLGRFPFAVGRQGDWASLMFA 312
+ + +D Y DIW+ G+ I+E Y F V + +
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 278
Query: 313 ICFAQPPEAPEMASREFRD--------FISRCLQKDPHSRWPAAQL 350
+C Q + P + +R F D + C ++P +R A ++
Sbjct: 279 VCVDQ--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G G V P + A+K++ + + S + E+E+++
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 143
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 204 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G G V P + A+K++ + + S + E+E+++
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 146
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 207 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V+ E+ G+L ++R
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 198 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 250
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 81
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 138
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHR++ N ++ VKI DFG++R + +T G + +
Sbjct: 139 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 199 MAPE----SLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P+ R
Sbjct: 254 PDNCPERVT----DLMRMCWQFNPNMR 276
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 41/285 (14%)
Query: 101 LQKGNRIGSGSGGTV-----WRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +G G+ G V + + T R A+K++ S + E++IL +
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 155 NHPNVVKCHDMYDR-NGEIEVLLEYMDGGSLEGAHIRQ---------------------- 191
+H NVV + G + V+ E+ G+L ++R
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 192 EHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC- 250
EH++ + QV G+ +L RK +HRD+ N+L++ VKI DFG++R + + D
Sbjct: 139 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 251 -NSAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWAS 308
A + +M+PE I + D+WS GV + E F LG P+ G + D
Sbjct: 198 KGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKID-EE 250
Query: 309 LMFAICFAQPPEAPEMASREFRDFISRCLQKDPHSRWPAAQLLQH 353
+ AP+ + E + C +P R ++L++H
Sbjct: 251 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + + E I+ NH N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 232 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 286
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 287 GPVYR----IMTQCWQHQPEDRPNFAIILE 312
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 42/267 (15%)
Query: 106 RIGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQI--CREIEILRDVNHPN 158
+G GS G V+ ++ A+K + N S+R +I E +++ +
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHH 82
Query: 159 VVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR-----------------QEHILSDLARQ 201
VV+ + + V++E M G L+ +++R QE I +A +
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLK-SYLRSLRPEAENNPGRPPPTLQEMI--QMAAE 139
Query: 202 VLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAVGT--IAY 259
+ G+AYL+ +K VHR++ N ++ VKI DFG++R + +T G + +
Sbjct: 140 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 260 MSPERINTDLNHGKYDGYAGDIWSLGVSILEFY-LGRFPF-AVGRQGDWASLMFAICFAQ 317
M+PE L G + + D+WS GV + E L P+ + + +M Q
Sbjct: 200 MAPE----SLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 254
Query: 318 PPEAPEMASREFRDFISRCLQKDPHSR 344
P PE + D + C Q +P+ R
Sbjct: 255 PDNCPERVT----DLMRMCWQFNPNMR 277
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++EY G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + ++IADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 63/291 (21%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGS---LEGAHIR---QEHILSDLAR 200
E+ + + NHPN+V + + E+ V+ +M GS L H E ++ + +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 119
Query: 201 QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ---------TMDPCN 251
VL L Y+H VHR +K S++LI+ V ++ G+ L+ D
Sbjct: 120 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPK 177
Query: 252 SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF------------- 298
+V + ++SPE + +L YD DI+S+G++ E G PF
Sbjct: 178 YSVKVLPWLSPEVLQQNLQ--GYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKL 234
Query: 299 ------------------------AVGRQGDWASLMFAICFAQPPEAPE-----MASREF 329
+V G SL + ++P S F
Sbjct: 235 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF 294
Query: 330 RDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPRPLSS 380
F+ +CLQ++P +R A+ LL H F + + + ++ L ++L P P+++
Sbjct: 295 HHFVEQCLQRNPDARPSASTLLNHSF-FKQIKRRASEALPELLRPVTPITN 344
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR--EIEILRDVNHPNVVKCH 163
R+G GS G V R+ T A+K VR ++ R E+ ++ P +V +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 132
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + +E ++GGSL G I+Q L + Q L GL YLH R+I+H D
Sbjct: 133 GAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 219 IKPSNLLINSSKN-VKIADFGVSRI-----LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+K N+L++S + + DFG + L +++ + GT +M+PE + G
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM-----G 246
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFA 299
K DIWS +L G P+
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHPWT 273
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 63/291 (21%)
Query: 147 EIEILRDVNHPNVVKCHDMYDRNGEIEVLLEYMDGGS---LEGAHIR---QEHILSDLAR 200
E+ + + NHPN+V + + E+ V+ +M GS L H E ++ + +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 135
Query: 201 QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQ---------TMDPCN 251
VL L Y+H VHR +K S++LI+ V ++ G+ L+ D
Sbjct: 136 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPK 193
Query: 252 SAVGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPF------------- 298
+V + ++SPE + +L YD DI+S+G++ E G PF
Sbjct: 194 YSVKVLPWLSPEVLQQNLQ--GYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKL 250
Query: 299 ------------------------AVGRQGDWASLMFAICFAQPPEAPE-----MASREF 329
+V G SL + ++P S F
Sbjct: 251 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHF 310
Query: 330 RDFISRCLQKDPHSRWPAAQLLQHPFILRAGQSQVNQNLRQILPPPRPLSS 380
F+ +CLQ++P +R A+ LL H F + + + ++ L ++L P P+++
Sbjct: 311 HHFVEQCLQRNPDARPSASTLLNHSF-FKQIKRRASEALPELLRPVTPITN 360
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR--EIEILRDVNHPNVVKCH 163
R+G GS G V R+ T A+K VR ++ R E+ ++ P +V +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 116
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + +E ++GGSL G I+Q L + Q L GL YLH R+I+H D
Sbjct: 117 GAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 219 IKPSNLLINSSKN-VKIADFGVSRI-----LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+K N+L++S + + DFG + L +++ + GT +M+PE + G
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-----MG 230
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFA 299
K DIWS +L G P+
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWT 257
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 107 IGSGSGGTVW--RVVHPPTSRV-FALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCH 163
IG G G V+ + +R+ A+K + E RE ++R +NHPNV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 164 D-MYDRNGEIEVLLEYMDGGSLEGAHIRQEH---ILSDL---ARQVLSGLAYLHKRKIVH 216
M G VLL YM G L IR + DL QV G+ YL ++K VH
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLL-QFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 217 RDIKPSNLLINSSKNVKIADFGVSRILAQ----TMDPCNSAVGTIAYMSPERINTDLNHG 272
RD+ N +++ S VK+ADFG++R + ++ A + + + E + T
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT 207
Query: 273 KYDGYAGDIWSLGVSILEFYL-GRFPFAVGRQGDWASLMFAICFAQPPEAPEMASREFRD 331
K D+WS GV + E G P+ R D L + + PE
Sbjct: 208 K-----SDVWSFGVLLWELLTRGAPPY---RHIDPFDLTHFLAQGRRLPQPEYCPDSLYQ 259
Query: 332 FISRCLQKDPHSR 344
+ +C + DP R
Sbjct: 260 VMQQCWEADPAVR 272
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
N +G G G V++ + V A+K + Q E+E++ H N+++
Sbjct: 44 NILGRGGFGKVYKGRLADGTLV-AVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRG 102
Query: 165 MYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD----------LARQVLSGLAYLHKR-- 212
E ++ YM GS+ A +E S +A GLAYLH
Sbjct: 103 FCMTPTERLLVYPYMANGSV--ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 213 -KIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPCNSAV-GTIAYMSPERINTDLN 270
KI+HRD+K +N+L++ + DFG+++++ AV GTI +++PE ++T +
Sbjct: 161 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKS 220
Query: 271 HGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMF 311
K D++ GV +LE G+ F + R + +M
Sbjct: 221 SEKT-----DVFGYGVMLLELITGQRAFDLARLANDDDVML 256
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 106 RIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICR--EIEILRDVNHPNVVKCH 163
R+G GS G V R+ T A+K VR ++ R E+ ++ P +V +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 130
Query: 164 DMYDRNGEIEVLLEYMDGGSLEGAHIRQEHILSD-----LARQVLSGLAYLHKRKIVHRD 218
+ + +E ++GGSL G I+Q L + Q L GL YLH R+I+H D
Sbjct: 131 GAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 219 IKPSNLLINSSKN-VKIADFGVSRI-----LAQTMDPCNSAVGTIAYMSPERINTDLNHG 272
+K N+L++S + + DFG + L +++ + GT +M+PE + G
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV-----MG 244
Query: 273 KYDGYAGDIWSLGVSILEFYLGRFPFA 299
K DIWS +L G P+
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHPWT 271
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 201 QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMD--------PCNS 252
Q+ + +LH + ++HRD+KPSN+ VK+ DFG+ + Q + P +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 253 A----VGTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQ---GD 305
VGT YMSPE+I HG + DI+SLG+ + E L F + R D
Sbjct: 232 THXGQVGTKLYMSPEQI-----HGNNYSHKVDIFSLGLILFEL-LYSFSTQMERVRIITD 285
Query: 306 WASLMFAICFAQ 317
+L F + F Q
Sbjct: 286 VRNLKFPLLFTQ 297
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G G V+ + +A+K I + + R ++ RE++ L + HP +V+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 68
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ +NH N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 232 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 286
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 287 GPVYR----IMTQCWQHQPEDRPNFAIILE 312
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 101 LQKGNRIGSGSGGTVWRVVHPPTSRV-----FALKVIYGNHEDSVRSQICREIEILRDV- 154
L+ G +GSG+ G V S+ A+K++ + S R + E++++ +
Sbjct: 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 106
Query: 155 NHPNVVKCHDMYDRNGEIEVLLEYMDGGSL---------------------------EGA 187
+H N+V +G I ++ EY G L E
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 188 HIRQEHILSDLARQVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTM 247
++ L A QV G+ +L + VHRD+ N+L+ K VKI DFG++R M
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR---DIM 223
Query: 248 DPCNSAVGT-----IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
N V + +M+PE L G Y D+WS G+ + E F LG P+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPE----SLFEGIYT-IKSDVWSYGILLWEIFSLGVNPY 275
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
+R G G ++ ++ A+K + E +R + E + + HPNVV
Sbjct: 37 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG 96
Query: 165 MYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI-------------------LSDLARQVLS 204
+ ++ + ++ Y G L E +R H L Q+ +
Sbjct: 97 VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 156
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSP 262
G+ YL +VH+D+ N+L+ NVKI+D G+ R + A +++ I +M+P
Sbjct: 157 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFA 299
E I +GK+ DIWS GV + E F G P+
Sbjct: 217 EAI----MYGKF-SIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 105/268 (39%), Gaps = 42/268 (15%)
Query: 107 IGSGSGGTVWRV----VHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
+G G+ G V+ + P ++ +S R RE E+L + H ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 163 HDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHILSD----------------LARQVL 203
+ + ++ EYM G L +H +L+ +A QV
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQT--MDPCNSAVGTIAYMS 261
+G+ YL VHRD+ N L+ VKI DFG+SR + T + I +M
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL-----MFAICFA 316
PE I + K+ + D+WS GV + E F G+Q W L + I
Sbjct: 206 PESI----LYRKFTTES-DVWSFGVVLWEI------FTYGKQ-PWYQLSNTEAIDCITQG 253
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
+ E P E + C Q++P R
Sbjct: 254 RELERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ +NH N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 218 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 272
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 273 GPVYR----IMTQCWQHQPEDRPNFAIILE 298
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++ Y G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 56/275 (20%)
Query: 107 IGSGSGGTVWRV----VHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
+G G+ G V+ + P ++ +S R RE E+L + H ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 163 HDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHILSD----------------LARQVL 203
+ + ++ EYM G L +H +L+ +A QV
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVS---------RILAQTMDPCNSAV 254
+G+ YL VHRD+ N L+ VKI DFG+S R+ +TM P
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP----- 223
Query: 255 GTIAYMSPERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL----- 309
I +M PE I + K+ + D+WS GV + E F G+Q W L
Sbjct: 224 --IRWMPPESI----LYRKFTTES-DVWSFGVVLWEI------FTYGKQ-PWYQLSNTEA 269
Query: 310 MFAICFAQPPEAPEMASREFRDFISRCLQKDPHSR 344
+ I + E P E + C Q++P R
Sbjct: 270 IDCITQGRELERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 105/268 (39%), Gaps = 42/268 (15%)
Query: 107 IGSGSGGTVWRV----VHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKC 162
+G G+ G V+ + P ++ +S R RE E+L + H ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 163 HDMYDRNGEIEVLLEYMDGGSLEG---AHIRQEHILSD----------------LARQVL 203
+ + ++ EYM G L +H +L+ +A QV
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 204 SGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQT--MDPCNSAVGTIAYMS 261
+G+ YL VHRD+ N L+ VKI DFG+SR + T + I +M
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 262 PERINTDLNHGKYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASL-----MFAICFA 316
PE I + K+ + D+WS GV + E F G+Q W L + I
Sbjct: 200 PESI----LYRKFTTES-DVWSFGVVLWEI------FTYGKQ-PWYQLSNTEAIDCITQG 247
Query: 317 QPPEAPEMASREFRDFISRCLQKDPHSR 344
+ E P E + C Q++P R
Sbjct: 248 RELERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI------------LSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 208
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 209 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 263
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 264 GPVYR----IMTQCWQHQPEDRPNFAIILE 289
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 184 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 243
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 244 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 298
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 299 GPVYR----IMTQCWQHQPEDRPNFAIILE 324
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 105 NRIGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVKCHD 164
+R G G ++ ++ A+K + E +R + E + + HPNVV
Sbjct: 20 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG 79
Query: 165 MYDRNGEIEVLLEYMDGGSL-EGAHIRQEHI-------------------LSDLARQVLS 204
+ ++ + ++ Y G L E +R H L Q+ +
Sbjct: 80 VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 205 GLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSP 262
G+ YL +VH+D+ N+L+ NVKI+D G+ R + A +++ I +M+P
Sbjct: 140 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 199
Query: 263 ERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFA 299
E I +GK+ DIWS GV + E F G P+
Sbjct: 200 EAI----MYGKF-SIDSDIWSYGVVLWEVFSYGLQPYC 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 218 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 272
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 273 GPVYR----IMTQCWQHQPEDRPNFAIILE 298
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 223
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 224 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 278
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 279 GPVYR----IMTQCWQHQPEDRPNFAIILE 304
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEHI------------LSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 217 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 271
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 272 GPVYR----IMTQCWQHQPEDRPNFAIILE 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)
Query: 107 IGSGSGGTVWR-----VVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDVNHPNVVK 161
+G G+ G V+ + + P+ A+K + + E I+ NH N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 162 CHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH------------ILSDLARQVLSGLAYL 209
C + ++ +LLE M GG L+ + +R+ L +AR + G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLK-SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 210 HKRKIVHRDIKPSNLLINS---SKNVKIADFGVSRIL--AQTMDPCNSAVGTIAYMSPER 264
+ +HRDI N L+ + KI DFG++R + A A+ + +M PE
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA 233
Query: 265 INTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPFAVGRQGDWASLMFAICFAQPPE-AP 322
+ K D WS GV + E F LG P+ + + + PP+ P
Sbjct: 234 FMEGIFTSK-----TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 288
Query: 323 EMASREFRDFISRCLQKDPHSRWPAAQLLQ 352
R +++C Q P R A +L+
Sbjct: 289 GPVYR----IMTQCWQHQPEDRPNFAIILE 314
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 100 ELQKGNRIGSGSGGTVWRVV-------HPPTSRVFALKVIYGNHEDSVRSQICREIEILR 152
+L G +G G+ G V P + A+K++ + + S + E+E+++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 153 DV-NHPNVVKCHDMYDRNGEIEVLLEYMDGGSLEGAHIR------------------QEH 193
+ H N++ ++G + V++ Y G+L ++R ++
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR-EYLRARRPPGMEYSYDINRVPEEQM 154
Query: 194 ILSDLAR---QVLSGLAYLHKRKIVHRDIKPSNLLINSSKNVKIADFGVSRILAQTMDPC 250
DL Q+ G+ YL +K +HRD+ N+L+ + +KIADFG++R +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 251 NSAVGT--IAYMSPERINTDLNHGKYDGYAGDIWSLGVSILE-FYLGRFPF 298
+ G + +M+PE + + + D+WS GV + E F LG P+
Sbjct: 215 KTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 26/242 (10%)
Query: 107 IGSGSGGTVWRVVHPPTSRVFALKVIYGNHEDSVRSQICREIEILRDV------NHPNVV 160
IG GS G V + + ALK++ +E Q EI IL + N NV+
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMV--RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 161 KCHDMYDRNGEIEVLLEYMDGGSLEGAHIRQEH-----ILSDLARQVLSGLAYLHKRKIV 215
+ + I + E + E + ++ A +L L LHK +I+
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 216 HRDIKPSNLLINSS--KNVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLNHGK 273
H D+KP N+L+ +K+ DFG S Q + + + + Y +PE I G
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---YTXIQSRFYRAPEVI-----LGA 274
Query: 274 YDGYAGDIWSLGVSILEFYLGRFPFAVGR-QGDWASLMFAICFAQPPEAPEMASREFRDF 332
G D+WSLG + E G +P G +GD + M + P + AS+ ++F
Sbjct: 275 RYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIEL-LGMPSQKLLDASKRAKNF 332
Query: 333 IS 334
+S
Sbjct: 333 VS 334
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,822,349
Number of Sequences: 62578
Number of extensions: 386634
Number of successful extensions: 3987
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 820
Number of HSP's gapped (non-prelim): 1258
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)