BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016965
(379 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489625|gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 409
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/361 (75%), Positives = 297/361 (82%), Gaps = 11/361 (3%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE E MQR CEASLK LQ +G C GNS E K++ HPG DA E +
Sbjct: 1 MMALESKETMQRSCEASLKCLQIKGFPC------GNSFEGFPEFKEEIGSHPGRDAVEPV 54
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
H LSSEF+E +EF+N P Y HDFGSW TFYPDSQK+ QMN FESQFYPFP E RFQ
Sbjct: 55 HSLSSEFLELPSEFHNKPAYHHDFGSWPTFYPDSQKMQQHQMNCFESQFYPFPPETRFQH 114
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
AP++M + HP++ Q Q+FQYFVVIDFEATCDK++NP+PQEIIEFPSVIVSSVTGQLEAC
Sbjct: 115 APFSMFSQGHPFEIQFQDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEAC 174
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT FAVVTW
Sbjct: 175 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTKFAVVTW 234
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINLKVPFHE+FGG RC LKEAVEMAGL WQGRA
Sbjct: 235 SNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFHEIFGGARC-LKEAVEMAGLHWQGRA 293
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMD 356
HCGLDDAKNTARLLALLMHRG +FSITNSLMW T D SL+ Q E + L PHQ HK +
Sbjct: 294 HCGLDDAKNTARLLALLMHRGIRFSITNSLMWHTTDSSLSCKQSTENLSLAPHQPHKLKE 353
Query: 357 L 357
+
Sbjct: 354 I 354
>gi|255578253|ref|XP_002529994.1| conserved hypothetical protein [Ricinus communis]
gi|223530517|gb|EEF32399.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/360 (76%), Positives = 301/360 (83%), Gaps = 9/360 (2%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSV--ELKDDTIVHPGGDAGESIHQ 58
MMALE+ E +QR CEASLK LQ++G Y N V ELK+ VHPGGD E +H
Sbjct: 1 MMALENQETIQRSCEASLKCLQTKG----FPYGNPIDVFPELKEAISVHPGGDVVEPVHT 56
Query: 59 LSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQFAP 118
+SSEF+E +EF+ PTY HDFGSWSTFYPDSQKV CQ+N FESQFYPFP+E R+ +AP
Sbjct: 57 VSSEFLELPSEFHTKPTYHHDFGSWSTFYPDSQKVQQCQVNCFESQFYPFPMETRYHYAP 116
Query: 119 YNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQ 178
+N+ + PY+ Q+FQYFVVIDFEATCDK++NP+PQEIIEFPSVIVSSVTGQLEACFQ
Sbjct: 117 FNIYSQGCPYELHFQDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQ 176
Query: 179 TYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSN 238
TYVRPTCNQ LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKNT+FAVVTWSN
Sbjct: 177 TYVRPTCNQHLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTSFAVVTWSN 236
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WDCRVMLESECRFKKI KPPYFNRWINLKVPF EVFGGVRCNLKEAVEMAGLAWQGRAHC
Sbjct: 237 WDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVRCNLKEAVEMAGLAWQGRAHC 296
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLP-PHQLHKQMDL 357
GLDDAKNTARLLA LM +G KFSITNSLMWQT DGSL Q P+R LP P+Q K +L
Sbjct: 297 GLDDAKNTARLLAFLMRKGIKFSITNSLMWQTTDGSLALKQSPDR--LPSPYQPCKMKEL 354
>gi|296087843|emb|CBI35099.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/357 (75%), Positives = 296/357 (82%), Gaps = 5/357 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
M+ALEH E MQR CEAS+K LQS+ L GN +E LKD+T VH GGD E
Sbjct: 106 MIALEHKETMQRNCEASVKCLQSKRFPYKLPCK-GNPIEGFSELKDETSVHAGGDIVERE 164
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
LSSE ++ SNEF+N P YQ+DFGSW TFYPDSQKV CQ+N+FESQ+YPFPV+N+F +
Sbjct: 165 RSLSSESLKPSNEFHNKPIYQNDFGSWPTFYPDSQKVQQCQLNAFESQYYPFPVDNQFLY 224
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
AP++ + +PY+F Q+FQYFVVIDFEATCDK KNP+PQEIIEFPSVIVSSVTGQLEAC
Sbjct: 225 APFHAFSQGYPYEFMLQDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEAC 284
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQ+LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKNTNFAVVTW
Sbjct: 285 FQTYVRPTCNQILSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTW 344
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINLKVPF EVFGGV CNLKEAVEMAGLAWQGRA
Sbjct: 345 SNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVWCNLKEAVEMAGLAWQGRA 404
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHK 353
HCGLDDAKNTARLLA LMHRGFKFSITNSLMWQ D +W Q PE P + K
Sbjct: 405 HCGLDDAKNTARLLAFLMHRGFKFSITNSLMWQATDHPESWKQSPELSSFPEYHPQK 461
>gi|359487133|ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853630 [Vitis vinifera]
Length = 415
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/357 (75%), Positives = 296/357 (82%), Gaps = 5/357 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
M+ALEH E MQR CEAS+K LQS+ L GN +E LKD+T VH GGD E
Sbjct: 1 MIALEHKETMQRNCEASVKCLQSKRFPYKLP-CKGNPIEGFSELKDETSVHAGGDIVERE 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
LSSE ++ SNEF+N P YQ+DFGSW TFYPDSQKV CQ+N+FESQ+YPFPV+N+F +
Sbjct: 60 RSLSSESLKPSNEFHNKPIYQNDFGSWPTFYPDSQKVQQCQLNAFESQYYPFPVDNQFLY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
AP++ + +PY+F Q+FQYFVVIDFEATCDK KNP+PQEIIEFPSVIVSSVTGQLEAC
Sbjct: 120 APFHAFSQGYPYEFMLQDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEAC 179
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQ+LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKNTNFAVVTW
Sbjct: 180 FQTYVRPTCNQILSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTW 239
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINLKVPF EVFGGV CNLKEAVEMAGLAWQGRA
Sbjct: 240 SNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVWCNLKEAVEMAGLAWQGRA 299
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHK 353
HCGLDDAKNTARLLA LMHRGFKFSITNSLMWQ D +W Q PE P + K
Sbjct: 300 HCGLDDAKNTARLLAFLMHRGFKFSITNSLMWQATDHPESWKQSPELSSFPEYHPQK 356
>gi|224057242|ref|XP_002299190.1| predicted protein [Populus trichocarpa]
gi|222846448|gb|EEE83995.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/361 (74%), Positives = 294/361 (81%), Gaps = 11/361 (3%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE E MQR CEASLK LQ +G C GNS E K++ HPG D E +
Sbjct: 1 MMALESKETMQRSCEASLKCLQIKGFPC------GNSFEGFPEFKEEIGAHPGRDVVEPV 54
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
H LSSEF+E +EF+N P Y HDFGSW TFYPDSQK+ QMN FESQFYPFP E RFQ
Sbjct: 55 HSLSSEFLELPSEFHNKPAYHHDFGSWPTFYPDSQKMQQHQMNCFESQFYPFPPETRFQH 114
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
AP++M + HP++ Q Q+FQYFVVIDFEATCDK++NP+PQEIIEFPSVIVSSVTGQLEAC
Sbjct: 115 APFSMFSQGHPFEIQFQDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEAC 174
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT FAVVTW
Sbjct: 175 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTKFAVVTW 234
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINLKVPF ++FGG RC LKEAVEMAGL WQGRA
Sbjct: 235 SNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFCDIFGGARC-LKEAVEMAGLHWQGRA 293
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMD 356
HCGLDDAKNTARLLALLM RG +FSITNSLMW T D SL+ Q E + L PHQ HK +
Sbjct: 294 HCGLDDAKNTARLLALLMRRGIRFSITNSLMWHTTDSSLSCKQSAENLSLAPHQPHKLKE 353
Query: 357 L 357
+
Sbjct: 354 I 354
>gi|356556782|ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max]
Length = 414
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/361 (72%), Positives = 297/361 (82%), Gaps = 6/361 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE++E MQ CEASLK LQS+G CN Q +NGNS+E LK++ HP GD E
Sbjct: 1 MMALENSENMQINCEASLKCLQSKGFPCNFQ-SNGNSMEGYTELKNEPGTHPAGDVAEPN 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
L SEF+E SNEF+ PTY ++ +W+ + +S KV CQMN+FES +YP+PVEN Q+
Sbjct: 60 CHLGSEFLEPSNEFHTKPTYHQNYSTWTPCHFNSHKVQQCQMNAFESHYYPYPVENPLQY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
P NM+ +P + Q QEFQYFVVIDFEATCDKDKNP+PQEIIEFPSVIVSS+TGQLEAC
Sbjct: 120 VPINMVAQGYPRE-QYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEAC 178
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQLL+DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKN+NFAVVTW
Sbjct: 179 FQTYVRPTCNQLLTDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTW 238
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINL++PF EVFG VRCNLKEAVE+AGLAWQGRA
Sbjct: 239 SNWDCRVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVRCNLKEAVEIAGLAWQGRA 298
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMD 356
HCGLDDAKNTA LLALLMHRGFKFSITNS+MWQT D L W Q PE+ + PH +K D
Sbjct: 299 HCGLDDAKNTAHLLALLMHRGFKFSITNSIMWQTADRPLMWKQSPEQPIVFPHSPYKAKD 358
Query: 357 L 357
+
Sbjct: 359 I 359
>gi|224072947|ref|XP_002303940.1| predicted protein [Populus trichocarpa]
gi|222841372|gb|EEE78919.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/348 (75%), Positives = 286/348 (82%), Gaps = 4/348 (1%)
Query: 10 MQRMCEASLKGLQSRGIRCNLQYNNGNSVELKDDTIVHPGGDAGESIHQLSSEFVEYSNE 69
MQR CEASLK LQ +G N S K++ HPG D E +H LSSEF+E +E
Sbjct: 1 MQRSCEASLKCLQIKGFPYG---NTFESFRFKEEIGAHPGRDVVEPVHSLSSEFLELPSE 57
Query: 70 FYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQFAPYNMLTPAHPYD 129
F N P Y HDFGSWSTFYPDSQK+ CQMN FESQFYPFP+E RFQ+AP+NM + +P +
Sbjct: 58 FQNKPAYHHDFGSWSTFYPDSQKMPPCQMNCFESQFYPFPLETRFQYAPFNMFSQGYPCE 117
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q Q+FQYFVVIDFEATCDK++NP+PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ L
Sbjct: 118 IQLQDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHL 177
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT+FAVVTWSNWDCRVMLESEC
Sbjct: 178 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTSFAVVTWSNWDCRVMLESEC 237
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
RFKKI KPPYFNRWINLKVPF E+FGG RC LKEAVEMAGL WQGRAHCGLDDAKNTARL
Sbjct: 238 RFKKIRKPPYFNRWINLKVPFCEIFGGARC-LKEAVEMAGLEWQGRAHCGLDDAKNTARL 296
Query: 310 LALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDL 357
LALLMHRG +FSITNSLMW T D SL Q PE + PHQ K ++
Sbjct: 297 LALLMHRGIRFSITNSLMWNTTDSSLPCKQSPENLSFSPHQPQKLKEM 344
>gi|356548831|ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
Length = 414
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/361 (72%), Positives = 297/361 (82%), Gaps = 6/361 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE++E MQ CEASLK LQ +G CN Q +NG+S+E LK++ HP GD E
Sbjct: 1 MMALENSENMQINCEASLKCLQGKGFPCNFQ-SNGSSMEGFTELKNEPGTHPSGDVAEPN 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
L SEF+E SNEF+ PTY ++ +W+ + +S KV CQMN+FES +YP+PVEN Q+
Sbjct: 60 CHLGSEFLEPSNEFHTKPTYHQNYSTWTPCHFNSHKVQQCQMNAFESHYYPYPVENPLQY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
P NM+ +P + Q QEFQYFVVIDFEATCDKDKNP+PQEIIEFPSVIVSS+TGQLEAC
Sbjct: 120 VPINMVAQGYPRE-QYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEAC 178
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKN+NFAVVTW
Sbjct: 179 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTW 238
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINL++PF EVFG V+CNLKEAVE+AGLAWQGRA
Sbjct: 239 SNWDCRVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRA 298
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMD 356
HCGLDDAKNTARLLALLMHRGFKFSITNS+MWQT D L W Q PE+ + PH +K D
Sbjct: 299 HCGLDDAKNTARLLALLMHRGFKFSITNSIMWQTADRPLMWKQSPEQPIVFPHCPYKAKD 358
Query: 357 L 357
+
Sbjct: 359 I 359
>gi|357515343|ref|XP_003627960.1| ERI1 exoribonuclease [Medicago truncatula]
gi|355521982|gb|AET02436.1| ERI1 exoribonuclease [Medicago truncatula]
gi|388515457|gb|AFK45790.1| unknown [Medicago truncatula]
Length = 415
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/362 (72%), Positives = 295/362 (81%), Gaps = 6/362 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE++E MQ CEASLK LQ +G Q N G+S+E L ++ HP G+ E
Sbjct: 1 MMALENSENMQITCEASLKCLQGKGPPFTFQCN-GSSMEVFPELNNEPGNHPSGNVPEPN 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
H+L SEF+E SNEF+N PTY HD+ +W+ + K+ CQMN+FE+ FYP PVEN+FQ+
Sbjct: 60 HRLGSEFLEPSNEFHNKPTYHHDYSTWTACHFHPHKMQQCQMNAFENHFYPHPVENQFQY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
AP NM++ +P + Q QEFQ FVVIDFEATCDKDKNP+PQEIIEFPSVIVSSVTGQLEAC
Sbjct: 120 APINMVSQGYPRE-QYQEFQNFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC 178
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQ LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE KGIKN NFAVVTW
Sbjct: 179 FQTYVRPTCNQHLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNANFAVVTW 238
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINL+VPF EVFG VRCNLKEAVE+AGLAWQGRA
Sbjct: 239 SNWDCRVMLESECRFKKIRKPPYFNRWINLRVPFSEVFGAVRCNLKEAVEIAGLAWQGRA 298
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMD 356
HCGLDDAKNTARLLALLMHRGFKFSITNS+MWQT D SL W Q PE+ PH K D
Sbjct: 299 HCGLDDAKNTARLLALLMHRGFKFSITNSIMWQTADRSLIWKQSPEQPSAYPHFPFKARD 358
Query: 357 LD 358
++
Sbjct: 359 MN 360
>gi|449458085|ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
Length = 414
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/348 (72%), Positives = 284/348 (81%), Gaps = 6/348 (1%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSV----ELKDDTIVHPGGDAGESI 56
MMALE E+MQR CEAS+K LQ+ G+ +LQ++ GNS EL D+ H D E+
Sbjct: 1 MMALERKESMQRNCEASIKCLQNNGMPFSLQHS-GNSADGFQELTDEISCHANNDIPETN 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
H L + F+E NEF+N P YQH+ SW F+ +SQKV CQM++ + QFY PVENRFQ+
Sbjct: 60 HPLVNNFIERPNEFHNKPAYQHNSRSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
P+ M P + D + QEFQYFVVIDFEATCDKD+NP+PQEIIEFPSVIV+SVTG LEAC
Sbjct: 120 FPFKMFEPNY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEAC 178
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
FQTYVRPTCNQ LSDFC+DLTGIQQIQVDRGVTL+EALLRHDKWLE +GIKNTNFAVVTW
Sbjct: 179 FQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTW 238
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
SNWDCRVMLESECRFKKI KPPYFNRWINLKVPF EVFGG RCNLKEAVEMAGL W+GRA
Sbjct: 239 SNWDCRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRA 298
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERI 344
HCGLDDAKNTARLLAL+MH+GF+FSITNSLMWQT D L W Q PE +
Sbjct: 299 HCGLDDAKNTARLLALIMHKGFRFSITNSLMWQTTDCPLQWKQSPETV 346
>gi|296083880|emb|CBI24268.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/361 (60%), Positives = 261/361 (72%), Gaps = 12/361 (3%)
Query: 5 EHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVEL---KDDTIVHPGGDAGESIHQLSS 61
+++E MQ+ EAS++ LQS+ N Q+N L KD+ G E S
Sbjct: 23 DNSEKMQKAWEASMRCLQSKAFPYNPQFNVSFVEGLPGVKDEVHTDCRGGIIEGDCSSSI 82
Query: 62 EFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRFQ 115
E + NE Y P + D+ ST +P QK HH Q + ES FYP FP++N+
Sbjct: 83 ESIAPPNEGYYGPMHLQDYYQRSTSHPYIQKAHHNQFHMVESHFYPMNHKSCFPMDNQPH 142
Query: 116 FAPY---NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ 172
+ P+ ML+ +HP DF QEFQYFVVIDFEATCDK+KNP+PQEIIEFPSV+V+S+TGQ
Sbjct: 143 YVPFLPLKMLSQSHPQDFHFQEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQ 202
Query: 173 LEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA 232
LE FQ YVRPTCN LLSDFCK+LTGIQQIQVD GV LSEALL HD+WLE KGIK+TNFA
Sbjct: 203 LEDSFQIYVRPTCNHLLSDFCKELTGIQQIQVDNGVLLSEALLMHDRWLEQKGIKHTNFA 262
Query: 233 VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 292
VVTWS+WDCRVMLESECRFK+I KPPYFNRWINLKVPFHEVFG +RCNLKEAV+ AGL W
Sbjct: 263 VVTWSDWDCRVMLESECRFKRIRKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLW 322
Query: 293 QGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLH 352
+GRAHCGLDDAKNTARLLA +MHRGF+FSITNSL+WQ+ + QF + + P H
Sbjct: 323 EGRAHCGLDDAKNTARLLAHIMHRGFRFSITNSLIWQSTERPSIRQQFHDCQYGPIQHPH 382
Query: 353 K 353
K
Sbjct: 383 K 383
>gi|225435848|ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
Length = 425
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/356 (61%), Positives = 257/356 (72%), Gaps = 12/356 (3%)
Query: 10 MQRMCEASLKGLQSRGIRCNLQYNNGNSVEL---KDDTIVHPGGDAGESIHQLSSEFVEY 66
MQ+ EAS++ LQS+ N Q+N L KD+ G E S E +
Sbjct: 1 MQKAWEASMRCLQSKAFPYNPQFNVSFVEGLPGVKDEVHTDCRGGIIEGDCSSSIESIAP 60
Query: 67 SNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRFQFAPY- 119
NE Y P + D+ ST +P QK HH Q + ES FYP FP++N+ + P+
Sbjct: 61 PNEGYYGPMHLQDYYQRSTSHPYIQKAHHNQFHMVESHFYPMNHKSCFPMDNQPHYVPFL 120
Query: 120 --NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACF 177
ML+ +HP DF QEFQYFVVIDFEATCDK+KNP+PQEIIEFPSV+V+S+TGQLE F
Sbjct: 121 PLKMLSQSHPQDFHFQEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLEDSF 180
Query: 178 QTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWS 237
Q YVRPTCN LLSDFCK+LTGIQQIQVD GV LSEALL HD+WLE KGIK+TNFAVVTWS
Sbjct: 181 QIYVRPTCNHLLSDFCKELTGIQQIQVDNGVLLSEALLMHDRWLEQKGIKHTNFAVVTWS 240
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
+WDCRVMLESECRFK+I KPPYFNRWINLKVPFHEVFG +RCNLKEAV+ AGL W+GRAH
Sbjct: 241 DWDCRVMLESECRFKRIRKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLWEGRAH 300
Query: 298 CGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHK 353
CGLDDAKNTARLLA +MHRGF+FSITNSL+WQ+ + QF + + P HK
Sbjct: 301 CGLDDAKNTARLLAHIMHRGFRFSITNSLIWQSTERPSIRQQFHDCQYGPIQHPHK 356
>gi|242057047|ref|XP_002457669.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
gi|241929644|gb|EES02789.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
Length = 424
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 253/366 (69%), Gaps = 10/366 (2%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVELKDDTIVHPGGDAGESIHQLS 60
M+ E E MQ EA L L+ + N G ++ A E I + S
Sbjct: 1 MIDRERAEEMQVNNEAPLVCLKPNISQYNSPEQRGGVEGFPENNEKRNDIVAAEKIWEAS 60
Query: 61 SEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRF 114
N+ + P Y+ +F +W + D Q V F++QFY FP+ENR
Sbjct: 61 P----IPNQGLSRPFYRQEFYAWPYIHSDYQMVRQPLPYGFDNQFYQINRDHGFPIENRV 116
Query: 115 QFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE 174
Q+ P+ ML HP+D Q QEFQYFVVIDFEATCDK NP+PQEIIEFPSV+V+S TG+LE
Sbjct: 117 QYLPFKMLPQGHPHDAQLQEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLE 176
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
CFQTYVRPT +Q L+DFCK+LTGIQQIQVDRGV L EALL HDKWLE+KGIKNTNFA+V
Sbjct: 177 ECFQTYVRPTYHQFLTDFCKELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIV 236
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWSNWDCR MLESECRFK+I KPPYFNRWINLKVPF EV+G VRCNLKEAV++AGL W+G
Sbjct: 237 TWSNWDCRTMLESECRFKRIRKPPYFNRWINLKVPFQEVYGDVRCNLKEAVQLAGLTWEG 296
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQ 354
RAHCGLDDA+NTARLLAL+MHRGFKFSITNSL+WQ S T P+R P Q K
Sbjct: 297 RAHCGLDDARNTARLLALMMHRGFKFSITNSLVWQPAPQSTTCQLSPDRSPDPVQQQQKP 356
Query: 355 MDLDGS 360
++ GS
Sbjct: 357 KEMLGS 362
>gi|195629706|gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]
Length = 437
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/335 (61%), Positives = 242/335 (72%), Gaps = 12/335 (3%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVELKDDTIVHPGGDAGESIHQLS 60
M+ E E MQ EA L L+ + N G ++ A E I + +
Sbjct: 1 MIDRERAEEMQVNNEAPLGCLKPNISQYNSPEQIGGVEGFPENNEKRNDIVAAEKIWEAT 60
Query: 61 SEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRF 114
N+ + P Y+ +F +W Y D Q V F++QFY FP+ENR
Sbjct: 61 P------NQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRV 114
Query: 115 QFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE 174
Q+ P+ ML HP+D Q QEFQYFVVIDFEATCDK NP+PQEIIEFPSV+V+S TG+LE
Sbjct: 115 QYLPFKMLPQGHPHDAQLQEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLE 174
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
CFQTYVRPT +Q L+DFCK+LTGIQQIQVDRGV L EALL HDKWLE+KGIKNTNFA+V
Sbjct: 175 ECFQTYVRPTYHQFLTDFCKELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIV 234
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWSNWDCR+MLESECRFK+I KPPYFNRWINL+VPF EV+G VRCNLKEAV++AGL W+G
Sbjct: 235 TWSNWDCRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEG 294
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
RAHCGLDDA+NTARLLALLMHRGFKFSITNSL+WQ
Sbjct: 295 RAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQ 329
>gi|414877072|tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]
Length = 436
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/335 (61%), Positives = 242/335 (72%), Gaps = 12/335 (3%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVELKDDTIVHPGGDAGESIHQLS 60
M+ E E MQ EA L L+ + N G ++ A E I + +
Sbjct: 1 MIDRERAEEMQVNNEAPLGCLKPNISQYNSPEQIGGVEGFPENNEKRNDIVAAEKIWEAT 60
Query: 61 SEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRF 114
N+ + P Y+ +F +W Y D Q V F++QFY FP+ENR
Sbjct: 61 P------NQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRV 114
Query: 115 QFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE 174
Q+ P+ ML HP+D Q QEFQYFVVIDFEATCDK NP+PQEIIEFPSV+V+S TG+LE
Sbjct: 115 QYLPFKMLPQGHPHDAQLQEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLE 174
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
CFQTYVRPT +Q L+DFCK+LTGIQQIQVDRGV L EALL HDKWLE+KGIKNTNFA+V
Sbjct: 175 ECFQTYVRPTYHQFLTDFCKELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIV 234
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWSNWDCR+MLESECRFK+I KPPYFNRWINL+VPF EV+G VRCNLKEAV++AGL W+G
Sbjct: 235 TWSNWDCRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEG 294
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
RAHCGLDDA+NTARLLALLMHRGFKFSITNSL+WQ
Sbjct: 295 RAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQ 329
>gi|414877071|tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea mays]
Length = 433
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/268 (71%), Positives = 221/268 (82%), Gaps = 6/268 (2%)
Query: 68 NEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRFQFAPYNM 121
N+ + P Y+ +F +W Y D Q V F++QFY FP+ENR Q+ P+ M
Sbjct: 59 NQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKM 118
Query: 122 LTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYV 181
L HP+D Q QEFQYFVVIDFEATCDK NP+PQEIIEFPSV+V+S TG+LE CFQTYV
Sbjct: 119 LPQGHPHDAQLQEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYV 178
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC 241
RPT +Q L+DFCK+LTGIQQIQVDRGV L EALL HDKWLE+KGIKNTNFA+VTWSNWDC
Sbjct: 179 RPTYHQFLTDFCKELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDC 238
Query: 242 RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
R+MLESECRFK+I KPPYFNRWINL+VPF EV+G VRCNLKEAV++AGL W+GRAHCGLD
Sbjct: 239 RIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLD 298
Query: 302 DAKNTARLLALLMHRGFKFSITNSLMWQ 329
DA+NTARLLALLMHRGFKFSITNSL+WQ
Sbjct: 299 DARNTARLLALLMHRGFKFSITNSLVWQ 326
>gi|226492270|ref|NP_001146741.1| uncharacterized protein LOC100280343 [Zea mays]
gi|219888569|gb|ACL54659.1| unknown [Zea mays]
Length = 427
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/268 (71%), Positives = 221/268 (82%), Gaps = 6/268 (2%)
Query: 68 NEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRFQFAPYNM 121
N+ + P Y+ +F +W Y D Q V F++QFY FP+ENR Q+ P+ M
Sbjct: 53 NQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKM 112
Query: 122 LTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYV 181
L HP+D Q QEFQYFVVIDFEATCDK NP+PQEIIEFPSV+V+S TG+LE CFQTYV
Sbjct: 113 LPQGHPHDAQLQEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYV 172
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC 241
RPT +Q L+DFCK+LTGIQQIQVDRGV L EALL HDKWLE+KGIKNTNFA+VTWSNWDC
Sbjct: 173 RPTYHQFLTDFCKELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDC 232
Query: 242 RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
R+MLESECRFK+I KPPYFNRWINL+VPF EV+G VRCNLKEAV++AGL W+GRAHCGLD
Sbjct: 233 RIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLD 292
Query: 302 DAKNTARLLALLMHRGFKFSITNSLMWQ 329
DA+NTARLLALLMHRGFKFSITNSL+WQ
Sbjct: 293 DARNTARLLALLMHRGFKFSITNSLVWQ 320
>gi|218187984|gb|EEC70411.1| hypothetical protein OsI_01406 [Oryza sativa Indica Group]
Length = 544
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/338 (61%), Positives = 246/338 (72%), Gaps = 18/338 (5%)
Query: 31 QYNNG--NSVELKDDTIVHPGGDAGESIHQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYP 88
Q +NG + E K+D+I A E + + S N+ P + ++ ++ Y
Sbjct: 156 QRSNGFPENSEKKNDSI------ATERVLEASP----LPNQGVFRPVQRTEYYAYPFIYA 205
Query: 89 DSQKVHHCQMNSFESQFY------PFPVENRFQFAPYNMLTPAHPYDFQPQEFQYFVVID 142
D Q Q + ++QFY FP+E+R Q+ P+ M +P D Q QEFQYFVVID
Sbjct: 206 DYQMPGQPQPYNLDNQFYQINRDHSFPIESRVQYLPFKMPPQGYPPDAQLQEFQYFVVID 265
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATCDK+ NP+PQEIIEFPSV+V+S TGQLEA FQTYVRP NQLL+DFCK+LTGIQQI
Sbjct: 266 FEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAYNQLLTDFCKELTGIQQI 325
Query: 203 QVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNR 262
QVDRGV LSEALL HDKWLE KGIK+ NFAVVTWSNWDCRVMLESECR K+I KPPYFNR
Sbjct: 326 QVDRGVPLSEALLMHDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRIRKPPYFNR 385
Query: 263 WINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
WINLKVPF EVFGGVRCNLKEAV+++GL W+GRAHCGLDDA+NTARLLALLMHRGFKFSI
Sbjct: 386 WINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSI 445
Query: 323 TNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDGS 360
TNSL+WQ+ S+T P P HK M++ GS
Sbjct: 446 TNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMGS 483
>gi|115435988|ref|NP_001042752.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|56783678|dbj|BAD81090.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|56784201|dbj|BAD81586.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|113532283|dbj|BAF04666.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|215737104|dbj|BAG96033.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618206|gb|EEE54338.1| hypothetical protein OsJ_01314 [Oryza sativa Japonica Group]
Length = 411
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/361 (59%), Positives = 254/361 (70%), Gaps = 21/361 (5%)
Query: 10 MQRMCEASLKGLQSRGIRCNLQYNNGNSV----ELKDDTIVHPGGDAGESIHQLSSEFVE 65
MQ EA L L+ + NLQ N E K+D+I A E + + S
Sbjct: 1 MQVNKEAPLGCLKPIS-QYNLQEQRSNGFPENSEKKNDSI------ATERVLEASP---- 49
Query: 66 YSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFY------PFPVENRFQFAPY 119
N+ + P + ++ ++ Y D Q Q + ++QFY FP+E+R Q+ P+
Sbjct: 50 LPNQGFFRPVQRTEYYAYPFIYADYQMPGQPQPYNLDNQFYQINRDHSFPIESRVQYLPF 109
Query: 120 NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQT 179
M +P D Q QEFQYFVVIDFEATCDK+ NP+PQEIIEFPSV+V+S TGQLEA FQT
Sbjct: 110 KMPPQGYPPDAQLQEFQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQT 169
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW 239
YVRP NQLL+DFCK+LTGIQQIQVDRGV LSEALL HDKWLE KGIK+ NFAVVTWSNW
Sbjct: 170 YVRPAYNQLLTDFCKELTGIQQIQVDRGVPLSEALLMHDKWLEEKGIKHKNFAVVTWSNW 229
Query: 240 DCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCG 299
DCRVMLESECR K+I KPPYFNRWINLKVPF EVFGGVRCNLKEAV+++GL W+GRAHCG
Sbjct: 230 DCRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCG 289
Query: 300 LDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDG 359
LDDA+NTARLLALLMHRGFKFSITNSL+WQ+ S+T P P HK M++ G
Sbjct: 290 LDDARNTARLLALLMHRGFKFSITNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMG 349
Query: 360 S 360
S
Sbjct: 350 S 350
>gi|357131416|ref|XP_003567334.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 425
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/293 (67%), Positives = 230/293 (78%), Gaps = 8/293 (2%)
Query: 68 NEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYP------FPVENRFQFAPYNM 121
N+ ++ P Y+ +F +W + + Q Q F++QFY F VE R QF P M
Sbjct: 64 NQGFSRPLYRQEFYAWPHIHSEYQMPRQPQPYGFDNQFYQINRDHNFSVEKRVQF-PLKM 122
Query: 122 LTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYV 181
L +P+D Q QEFQYFVVIDFEATCDK+ NP+PQEIIEFPSV+V+S TGQLEA FQTYV
Sbjct: 123 LPQGYPHDAQLQEFQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYV 182
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC 241
RP +Q L+DFCK+LTGIQQIQVDRGV LSEALL HDKWLE+KGIK+ NFAVVTWSNWDC
Sbjct: 183 RPAYHQNLTDFCKELTGIQQIQVDRGVPLSEALLMHDKWLEDKGIKHKNFAVVTWSNWDC 242
Query: 242 RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
RVMLESECRFK I KPPYFNRWINLKVPF E++GGVRCNLK+AV++AGL W+GRAHCGLD
Sbjct: 243 RVMLESECRFKSIRKPPYFNRWINLKVPFQEMYGGVRCNLKDAVQLAGLTWEGRAHCGLD 302
Query: 302 DAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQ 354
DA+NTARLLALLMHRGFKFSITNSL+WQ +T P+R L P QL ++
Sbjct: 303 DARNTARLLALLMHRGFKFSITNSLVWQPAPQQITCQPLPDRS-LEPTQLQQK 354
>gi|294461520|gb|ADE76321.1| unknown [Picea sitchensis]
Length = 436
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 175/229 (76%)
Query: 106 YPFPVENRFQFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVI 165
Y P + Q P+ + + + Q Q+FQYFVVIDFEATCD PQEIIEFPSV+
Sbjct: 112 YMLPPGSSLQNVPFKLQPQGNAQELQLQDFQYFVVIDFEATCDMGTRLSPQEIIEFPSVL 171
Query: 166 VSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKG 225
V+ +TG+LE F TY++P + +L+DFCK+LTGIQQ QV GV+LSEALL HD WLE +G
Sbjct: 172 VNGMTGRLEGHFHTYIKPVYHPVLTDFCKELTGIQQSQVIGGVSLSEALLMHDNWLEERG 231
Query: 226 IKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV 285
+KNTNFAVVTWS+WDC+VMLESEC K I KP YFNRWINLK+PF++ FG +RCNLK AV
Sbjct: 232 VKNTNFAVVTWSDWDCKVMLESECNLKGIRKPNYFNRWINLKLPFYDSFGQLRCNLKGAV 291
Query: 286 EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGS 334
E AGL W+GRAH GLDDAKNTARLL LM RG K +ITNS+++ + +GS
Sbjct: 292 EFAGLTWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANGS 340
>gi|255635608|gb|ACU18154.1| unknown [Glycine max]
Length = 197
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 152/198 (76%), Gaps = 6/198 (3%)
Query: 1 MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVE----LKDDTIVHPGGDAGESI 56
MMALE++E MQ CEASLK LQS+G CN Q +NGNS+E LK++ HP GD E
Sbjct: 1 MMALENSENMQINCEASLKCLQSKGFPCNFQ-SNGNSMEGYTELKNEPGTHPAGDVAEPN 59
Query: 57 HQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQF 116
L SEF+E SNEF+ PTY ++ +W+ + +S KV CQMN+FES +YP+PVEN Q+
Sbjct: 60 CHLGSEFLEPSNEFHTKPTYHQNYSTWTPCHFNSHKVQQCQMNAFESHYYPYPVENPLQY 119
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
P NM+ +P + Q QEFQYFVVIDFEATCDKDKNP+PQEIIEFPSVIVSS+TGQLEAC
Sbjct: 120 VPINMVAQGYPRE-QYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEAC 178
Query: 177 FQTYVRPTCNQLLSDFCK 194
FQTYVRPTCNQLL+DFCK
Sbjct: 179 FQTYVRPTCNQLLTDFCK 196
>gi|326490993|dbj|BAK05596.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 145/202 (71%), Gaps = 8/202 (3%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F +F+V+DFEATC+KD YPQEIIEFP+V+V TG L + F+ Y+RP + L+ F
Sbjct: 49 QDFDFFLVVDFEATCEKDARIYPQEIIEFPAVLVDGATGHLASAFRCYIRPKHHPALTKF 108
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE-----NKGIK--NTNFAVVTWSNWDCRVML 245
C+DLTGI+Q VD GV L +AL HD WL+ G K + AVVTW +WDCR ML
Sbjct: 109 CRDLTGIRQEDVDGGVDLGQALRLHDAWLKAATTTGAGTKRCDGRLAVVTWGDWDCRTML 168
Query: 246 ESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
E ECRFK I KP YF+RWINL+VPF G G R NL+EAV +AGL W+GR HCGLDDA+
Sbjct: 169 EFECRFKGIEKPSYFDRWINLRVPFQAALGSGGRVNLQEAVRVAGLDWEGRLHCGLDDAR 228
Query: 305 NTARLLALLMHRGFKFSITNSL 326
NTARLLA LM RG K SIT+SL
Sbjct: 229 NTARLLADLMLRGVKMSITDSL 250
>gi|302767276|ref|XP_002967058.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
gi|300165049|gb|EFJ31657.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
Length = 397
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 144/191 (75%), Gaps = 2/191 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F YFVVIDFEATCD +PQEIIEFPSV+V+ + +E FQTYV+PT N L+DF
Sbjct: 107 QAFDYFVVIDFEATCDSTVF-FPQEIIEFPSVLVAVHSLSVEDSFQTYVKPTFNPQLTDF 165
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK LTGI+Q QVD G+ L+EAL++HDKWLE+KG+K+ F V+TW++WDC+VML+ ECR K
Sbjct: 166 CKRLTGIEQTQVDNGMALAEALVKHDKWLEDKGVKSKRFGVITWTDWDCKVMLDFECRLK 225
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ KP YFN+WINLK F E FG + NLK+AV+ AGL WQGR HCGLDDAKNTA L
Sbjct: 226 GLTKPSYFNKWINLKSCFQEKFGD-KFNLKKAVQHAGLQWQGREHCGLDDAKNTASLAME 284
Query: 313 LMHRGFKFSIT 323
L+ RG + T
Sbjct: 285 LVKRGMQIGFT 295
>gi|302755050|ref|XP_002960949.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
gi|300171888|gb|EFJ38488.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
Length = 397
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 144/191 (75%), Gaps = 2/191 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F YFVVIDFEATCD +PQEIIEFPSV+V+ + +E FQTYV+PT N L+DF
Sbjct: 107 QAFDYFVVIDFEATCDSTVF-FPQEIIEFPSVLVAVHSLSVEDSFQTYVKPTFNPQLTDF 165
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK LTGI+Q QVD G+ L+EAL++HDKWLE+KG+K+ F V+TW++WDC+VML+ ECR K
Sbjct: 166 CKRLTGIEQTQVDNGMALAEALVKHDKWLEDKGVKSKRFGVITWTDWDCKVMLDFECRLK 225
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ KP YFN+WINLK F E FG + NLK+AV+ AGL WQGR HCGLDDAKNTA L
Sbjct: 226 GLTKPSYFNKWINLKSCFQEKFGD-KFNLKKAVQHAGLQWQGREHCGLDDAKNTASLAME 284
Query: 313 LMHRGFKFSIT 323
L+ RG + T
Sbjct: 285 LVRRGMQIGFT 295
>gi|357122926|ref|XP_003563164.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 310
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 143/204 (70%), Gaps = 4/204 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
P Q QEF FVV+DFEA C+KD YPQEIIEFPSV+V TG+L + F+ YVRP +
Sbjct: 19 PSAMQVQEFDCFVVVDFEAICEKDARIYPQEIIEFPSVLVDGATGRLASAFRRYVRPRHH 78
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI---KNTNFAVVTWSNWDCRV 243
+L+DFC++LTGI+Q VD GV L+EAL HD WLE + K FAVVTW +WDCR
Sbjct: 79 PVLTDFCRELTGIRQEDVDGGVDLAEALRLHDAWLEETMLATKKGGRFAVVTWGDWDCRS 138
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDD 302
ML+ ECRFK + KP YF+RWINL+VPF FGG R L+EAV AGL W+GR HCGLDD
Sbjct: 139 MLDKECRFKGLTKPAYFDRWINLRVPFQAAFGGSGRVTLQEAVRAAGLEWEGRLHCGLDD 198
Query: 303 AKNTARLLALLMHRGFKFSITNSL 326
A NT LL +M +G + +IT SL
Sbjct: 199 AINTEYLLVEVMQQGVQLAITGSL 222
>gi|115438614|ref|NP_001043587.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|54290428|dbj|BAD61298.1| unknown protein [Oryza sativa Japonica Group]
gi|113533118|dbj|BAF05501.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|215693971|dbj|BAG89138.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
EF +FVV+DFEATC++ + YPQEIIEFP+V+V + TG+L + F+ YVRP + L+DFC
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFC 85
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRF 251
++LTGI Q VD GV L+EALLRHD+WL G+ FAVVTW + DCR MLE ECRF
Sbjct: 86 RELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRF 145
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV--RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K I KP YF+RW++L+V F FGG R L+EAV AGL W GR HCGLDDA NTARL
Sbjct: 146 KGIAKPAYFDRWVDLRVHFEAAFGGGGQRVKLQEAVRAAGLEWVGRLHCGLDDACNTARL 205
Query: 310 LALLMHRGFKFSITNSL 326
L L+ RG SIT SL
Sbjct: 206 LVELLRRGVPISITGSL 222
>gi|125526866|gb|EAY74980.1| hypothetical protein OsI_02878 [Oryza sativa Indica Group]
Length = 304
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
EF +FVV+DFEATC++ + YPQEIIEFP+V+V + TG+L + F+ YVRP + L+DFC
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFC 85
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRF 251
++LTGI Q VD GV L+EALLRHD+WL G+ FAVVTW + DCR MLE ECRF
Sbjct: 86 RELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRF 145
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV--RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K I KP YF+RW++L+V F FGG R L+EAV AGL W GR HCGLDDA NTARL
Sbjct: 146 KGIAKPAYFDRWVDLRVHFEAAFGGGGRRVKLQEAVRAAGLEWVGRLHCGLDDACNTARL 205
Query: 310 LALLMHRGFKFSITNSL 326
L L+ RG SIT SL
Sbjct: 206 LVELLRRGVPISITGSL 222
>gi|125571192|gb|EAZ12707.1| hypothetical protein OsJ_02624 [Oryza sativa Japonica Group]
Length = 304
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
EF +FVV+DFEATC++ + YPQEIIEFP+V+V + TG+L + F+ YVRP + L+DFC
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFC 85
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRF 251
++LTGI Q VD GV L+EALLRHD+WL G+ FAVVTW + DCR MLE ECRF
Sbjct: 86 RELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRF 145
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV--RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K I KP YF+RW++L+V F FGG R L+EAV AGL W GR HCGLDDA TARL
Sbjct: 146 KGIAKPAYFDRWVDLRVHFEAAFGGGGQRVKLQEAVRAAGLEWVGRLHCGLDDACKTARL 205
Query: 310 LALLMHRGFKFSITNSL 326
L L+ RG SIT SL
Sbjct: 206 LVELLRRGVPISITGSL 222
>gi|242087831|ref|XP_002439748.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
gi|241945033|gb|EES18178.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
Length = 283
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +FVVIDFEATC + YPQEIIEFPSV+V TG+ + F+TYVRP + L+DFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
DLTGI Q VD GVTL+EAL HD+WLE G K AVVTW +WDCR MLE ECRFK I
Sbjct: 62 DLTGITQGDVDAGVTLAEALGMHDRWLEAHGAKLGKLAVVTWGDWDCRTMLEGECRFKGI 121
Query: 255 WKPPYFNRWINLKVPFHEVF--GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
KP YF+ WINL++PF F G VR L++A+ AGL W+GR HCGLDDA NTA LL
Sbjct: 122 EKPHYFDDWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 313 LMHRGFKFSITNSL 326
LM RG IT SL
Sbjct: 182 LMRRGTLLKITGSL 195
>gi|242078527|ref|XP_002444032.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
gi|241940382|gb|EES13527.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
Length = 283
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +FVVIDFEATC + YPQEIIEFPSV+V TG+ + F+TYVRP + L+DFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
DLTGI Q VD GVTL+EAL HD+WLE G K AVVTW +WDCR ML+ ECRFK I
Sbjct: 62 DLTGITQGDVDAGVTLAEALDMHDRWLEAHGAKLGKLAVVTWGDWDCRTMLDRECRFKGI 121
Query: 255 WKPPYFNRWINLKVPFHEVF--GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
KP YF+ WINL++PF F G VR L++A+ AGL W+GR HCGLDDA NTA LL
Sbjct: 122 EKPHYFDDWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 313 LMHRGFKFSITNSL 326
LM RG IT SL
Sbjct: 182 LMRRGTLLKITGSL 195
>gi|242078557|ref|XP_002444047.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
gi|241940397|gb|EES13542.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
Length = 287
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +FVVIDFEATC + YPQEIIEFPSV+V TG+ + F+TYVRP + L+DFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
DLTGI Q VD GV+L+EAL HD WLE G K AVVTW +WDCR MLE ECRFK I
Sbjct: 62 DLTGITQGDVDAGVSLAEALEMHDHWLEAHGAKLGKLAVVTWGDWDCRTMLEGECRFKGI 121
Query: 255 WKPPYFNRWINLKVPFHEVF--GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
KP YF+ WINL++PF F G VR L++A+ AGL W+GR HCGLDDA NTA LL
Sbjct: 122 EKPHYFDHWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 313 LMHRGFKFSITNSL 326
LM RG IT SL
Sbjct: 182 LMRRGTLLKITASL 195
>gi|215692771|dbj|BAG88201.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 120/144 (83%)
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG 276
HDKWLE KGIK+ NFAVVTWSNWDCRVMLESECR K+I KPPYFNRWINLKVPF EVFGG
Sbjct: 2 HDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFGG 61
Query: 277 VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLT 336
VRCNLKEAV+++GL W+GRAHCGLDDA+NTARLLALLMHRGFKFSITNSL+WQ+ S+T
Sbjct: 62 VRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQSAPQSIT 121
Query: 337 WNQFPERIFLPPHQLHKQMDLDGS 360
P P HK M++ GS
Sbjct: 122 CQSSPAHSPYPNQSHHKPMEVMGS 145
>gi|326518256|dbj|BAJ92491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD YPQEIIEFP+V+V +G++E+ F+ YVRP + +L+ FC+ LTGI+Q
Sbjct: 24 FEATCVKDARIYPQEIIEFPAVLVDGASGRIESSFRRYVRPKHHPVLTQFCRKLTGIRQE 83
Query: 203 QVDRGVTLSEALLRHDKWLENKGI-----KNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
VD GV L EAL HD WL+ + AVVTW +WDCR MLE ECRFK I KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGSSRRVQLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF+RWINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M R
Sbjct: 144 SYFDRWINLRVPFQAALGGGGRVNLEEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 317 GFKFSITNSL 326
G K +IT SL
Sbjct: 204 GVKMTITGSL 213
>gi|115485705|ref|NP_001067996.1| Os11g0525900 [Oryza sativa Japonica Group]
gi|77551213|gb|ABA94010.1| exonuclease family protein, expressed [Oryza sativa Japonica Group]
gi|113645218|dbj|BAF28359.1| Os11g0525900 [Oryza sativa Japonica Group]
Length = 319
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 149/213 (69%), Gaps = 17/213 (7%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLL 189
Q QEF YFVVID EATC++ + YPQEIIEF SV+V TG QL F+ YVRP ++ L
Sbjct: 16 QLQEFAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRPLHHREL 75
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--------NFAVVTWSNWDC 241
+D+C++LTGI Q VD GV L EAL HD WL+ +G+KN FAVVTW +WDC
Sbjct: 76 TDYCRELTGIAQADVDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGDWDC 135
Query: 242 RVMLESECRFKKI---WKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGR 295
R MLE ECRFK I KP YF+RWINLKVPF +VF G R L+EA+ +AGLA++GR
Sbjct: 136 RTMLEGECRFKGIIGDGKPEYFDRWINLKVPFRQVFDRGGARRIGLEEALAVAGLAFEGR 195
Query: 296 AHCGLDDAKNTARLLALLMHR--GFKFSITNSL 326
H GLDDA+NTARLLALLM R G + +IT SL
Sbjct: 196 PHSGLDDARNTARLLALLMRRRGGVRLAITGSL 228
>gi|326487924|dbj|BAJ89801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD +PQEIIEFP+V+V TG++E+ F+ YVRP + LL+ FC++LTGI+Q
Sbjct: 20 FEATCVKDARIFPQEIIEFPAVLVDGATGRMESAFRRYVRPKHHPLLTQFCRELTGIRQE 79
Query: 203 QVDRGVTLSEALLRHDKWLENKGI-----KNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
VD GV L EAL HD WL+ ++ AVVTW +WDCR MLE ECRFK I KP
Sbjct: 80 DVDGGVDLGEALWLHDDWLKEATAGAGNKRSVRLAVVTWGDWDCRTMLEFECRFKGIEKP 139
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF++WINL+VPF F GG R NL+EAV AGL W+GR HCGLDDA TARLL +M R
Sbjct: 140 SYFDQWINLRVPFQAAFGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALKTARLLVAIMRR 199
Query: 317 GFKFSITNSL 326
G K +IT SL
Sbjct: 200 GVKITITGSL 209
>gi|326529429|dbj|BAK04661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD +PQEIIEFP+V+V TG++E+ F+ YVRP + +L+ FC++LTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGRIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 203 QVDRGVTLSEALLRHDKWLENKGIKNTN-----FAVVTWSNWDCRVMLESECRFKKIWKP 257
VD GV L EAL HD WL+ N AVVTW +WDCR MLE ECRFK I KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF++WINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M R
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 317 GFKFSITNSL 326
G K +IT SL
Sbjct: 204 GVKMTITGSL 213
>gi|326508370|dbj|BAJ99452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 134/191 (70%), Gaps = 6/191 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD +PQEIIEFP+V+V TG++E+ F+ YVRP + +L+ FC++LTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGRIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 203 QVDRGVTLSEALLRHDKWLENKGIKNTN-----FAVVTWSNWDCRVMLESECRFKKIWKP 257
VD GV L EAL HD WL+ N AVVTW +WDCR MLE ECRFK I KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF++WINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M R
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 317 GFKFSITNSLM 327
G K +IT SL+
Sbjct: 204 GVKMTITGSLV 214
>gi|326504778|dbj|BAK06680.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD +PQEIIEFP+V+V TG +E+ F+ YVRP + +L+ FC++LTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGCIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 203 QVDRGVTLSEALLRHDKWLENKGIKNTN-----FAVVTWSNWDCRVMLESECRFKKIWKP 257
VD GV L EAL HD WL+ N AVVTW +WDCR MLE ECRFK I KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF++WINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M R
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 317 GFKFSITNSL 326
G K +IT SL
Sbjct: 204 GVKMTITGSL 213
>gi|238015266|gb|ACR38668.1| unknown [Zea mays]
Length = 221
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 109/113 (96%)
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG 276
HDKWLE+KGIKNTNFA+VTWSNWDCR+MLESECRFK+I KPPYFNRWINL+VPF EV+G
Sbjct: 2 HDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGD 61
Query: 277 VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
VRCNLKEAV++AGL W+GRAHCGLDDA+NTARLLALLMHRGFKFSITNSL+WQ
Sbjct: 62 VRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQ 114
>gi|326499798|dbj|BAJ90734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 143 FEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQI 202
FEATC KD +PQEIIEFP+V+V TG +E+ F+ YVRP + +L+ FC++LTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGCIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 203 QVDRGVTLSEALLRHDKWLENKGIKNTN-----FAVVTWSNWDCRVMLESECRFKKIWKP 257
+D GV L EAL HD WL+ N AVVTW +WDCR MLE ECRFK I KP
Sbjct: 84 DLDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 258 PYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF++WINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M R
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 317 GFKFSITNSL 326
G K +IT SL
Sbjct: 204 GVKMTITGSL 213
>gi|242084190|ref|XP_002442520.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
gi|241943213|gb|EES16358.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
Length = 238
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 129/191 (67%), Gaps = 5/191 (2%)
Query: 142 DFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQ 201
DF+ATC K K PQEIIEF SV+VS TGQLE+ F TYVRP + L+D+C+DL GI+Q
Sbjct: 40 DFKATCKKGKQINPQEIIEFSSVLVSGSTGQLESTFHTYVRPRLHPKLTDYCRDLNGIRQ 99
Query: 202 IQVDRGVTLSEALLRHDKWLENKGIKNTN---FAVVTWSNWDCRVMLESECRFKKIWKPP 258
VD G+ L+ AL H WL+ G K ++ F VVTW NWDCR MLE ECR K I +P
Sbjct: 100 KDVDAGMELAVALRMHGTWLQEMGTKKSSHFCFVVVTWGNWDCRSMLEPECRLKGIDRPL 159
Query: 259 YFNRWINLKVPFHEVFGGV--RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
YF+RWINL++PF FGG + +L +AV M G+ W+GR DDA+NTA LL LM R
Sbjct: 160 YFDRWINLRIPFVATFGGSKPKADLADAVRMVGMEWEGRPRGASDDARNTALLLRELMRR 219
Query: 317 GFKFSITNSLM 327
G + IT+SL+
Sbjct: 220 GVELGITSSLV 230
>gi|357119528|ref|XP_003561489.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 244
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 132/198 (66%), Gaps = 6/198 (3%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC-FQTYVRPTCNQLLSDFC 193
YFVV+DF+ATC+K PQEIIEF SV+V VTG E+ F +Y+RP +L+DFC
Sbjct: 32 LDYFVVVDFKATCEKGLMFNPQEIIEFSSVLVDPVTGNSESPPFHSYLRPQERPVLTDFC 91
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWL---ENKGIKNTNFAVVTWSNWDCRVMLESECR 250
++ GIQQ VD+G+ L+EAL +H+ WL E K + FA+VTW +WDCR ML+ ECR
Sbjct: 92 REYNGIQQTDVDKGIVLAEALPKHEAWLKEAETKKGRALRFAIVTWGDWDCRSMLDRECR 151
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGG--VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
K + P YF++WI+LK+PF + FG + + +A+ AGL W+GR + G +A N AR
Sbjct: 152 HKGVASPQYFHQWIDLKIPFMDKFGREYIPGSALKALTEAGLLWEGRRNGGFYNAHNKAR 211
Query: 309 LLALLMHRGFKFSITNSL 326
LL L+ +G +FSIT+ L
Sbjct: 212 LLGFLVQQGVQFSITSKL 229
>gi|125534582|gb|EAY81130.1| hypothetical protein OsI_36313 [Oryza sativa Indica Group]
Length = 192
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 108/156 (69%), Gaps = 12/156 (7%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLL 189
Q QEF YFVVID EATC++ + YPQEIIEF SV+V TG QL F+ YVRP ++ L
Sbjct: 16 QLQEFAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRPLHHREL 75
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--------NFAVVTWSNWDC 241
+D+C++LTGI Q VD GV L EAL HD WL+ +G+KN FAVVTW +WDC
Sbjct: 76 TDYCRELTGIAQADVDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGDWDC 135
Query: 242 RVMLESECRFKKI---WKPPYFNRWINLKVPFHEVF 274
R MLE ECRFK I KP YF+RWINLKVPF +++
Sbjct: 136 RTMLEGECRFKGIIGDGKPEYFDRWINLKVPFRQIY 171
>gi|291233033|ref|XP_002736458.1| PREDICTED: Eri3 protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F Q++ YF+V+DFEATC+K YPQEIIE P + + + T + EA F TYV+PT N +L
Sbjct: 15 FPRQDYNYFLVLDFEATCEKSTKIYPQEIIEIPVLKIHAKTFETEAIFHTYVQPTANPIL 74
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN--TNFAVVTWSNWDCRVMLES 247
+ FC +LTGI Q V + EAL DKW+ ++G+ + T F VT +WD + ML
Sbjct: 75 TPFCTELTGITQDVVCGKPKIEEALKMLDKWMLDQGLLDGETAFVFVTCGDWDLKTMLPG 134
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C++ ++ YF WIN+K PF EV +R +L E ++M L GR H G+DD KN
Sbjct: 135 QCKYFRLPIANYFKSWINIKRPFSEVVRPNIRVDLMEMLQMLDLEHHGRHHSGIDDTKNI 194
Query: 307 ARLLALLMHRGFKFSITNSLMW 328
A +L L RG KF T+ L +
Sbjct: 195 ANILQELAKRGCKFKATSGLTY 216
>gi|195999854|ref|XP_002109795.1| hypothetical protein TRIADDRAFT_20827 [Trichoplax adhaerens]
gi|190587919|gb|EDV27961.1| hypothetical protein TRIADDRAFT_20827, partial [Trichoplax
adhaerens]
Length = 229
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 20/213 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q+F Y ++IDFEATC KD + Y EIIEFP+V+++ +T Q+EA F YV+PT N LS+
Sbjct: 1 QKFSYVIIIDFEATCWKDNSSRYSSEIIEFPAVLLNVLTQQIEAVFHQYVQPTINPKLSE 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV------------------ 233
FCK LTGI Q QVD G+ L+ L+ KWL+ + IKN N +
Sbjct: 61 FCKTLTGITQKQVDDGIPLATCLVSFRKWLD-EIIKNKNIRLFNKNCRDAGHKNYYNCIF 119
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQ 293
VTWS+WD V L EC+ K+I P F +WI+L+ + +G L ++E GL +
Sbjct: 120 VTWSDWDIGVCLYYECKKKQIKLPTEFYQWIDLRALYKRFYGKKPTGLNGSMESVGLKFI 179
Query: 294 GRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
GR H GLDD+KNTARL + ++H G +T +
Sbjct: 180 GREHSGLDDSKNTARLCSKMVHDGCVLDVTKRI 212
>gi|348540662|ref|XP_003457806.1| PREDICTED: ERI1 exoribonuclease 2-like [Oreochromis niloticus]
Length = 628
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +VIDFE+TC ++KN QEIIEFP+V++++ TG++E+ F TYV+P + +LSDF
Sbjct: 30 QVFSYLIVIDFESTCWREKNNRSQEIIEFPAVLLNTSTGEVESEFHTYVQPQEHPILSDF 89
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----------------KGIKNTNFAVVTW 236
C +LTGI Q+QV+ G+ L L R +WL+N G +TW
Sbjct: 90 CTELTGITQMQVEAGIPLQICLSRFSRWLQNLQLEMGVAFANKDQRCSGPSQKLCTFLTW 149
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
S+WD V L+ EC+ K++ KP N WI+L+ + + L A++ G+ + GR
Sbjct: 150 SDWDLGVCLQYECKRKQLHKPDVLNSWIDLRSTYRLFYNRKPKGLNGALQDLGIQFSGRE 209
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDDA+NTA+L A +M G IT SL
Sbjct: 210 HSGLDDARNTAQLAARMMRDGCIMKITRSL 239
>gi|242014471|ref|XP_002427913.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212512397|gb|EEB15175.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 386
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 116/196 (59%), Gaps = 5/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y+VVIDFEATCD +K QEIIEFP+V+V+S ++E CF+ Y +P N LS +C
Sbjct: 102 FPYYVVIDFEATCD-NKKIDRQEIIEFPAVLVNSKKQKIEDCFRMYCKPRINPKLSQYCM 160
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD T + L ++ WL+ N G KN +AVVT NWD L S+C +
Sbjct: 161 ELTGITQEQVDNAETFDKVLSHYNNWLKKHNLGTKNKRYAVVTDGNWDMSKFLVSQCHYS 220
Query: 253 KIWKPPYFNRWINLKVPFHEVF--GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + W+NLK F + G R LK +EM + + GR HCGLDDAKN AR+L
Sbjct: 221 NVPIPKWGKTWVNLKKTFKNFYQKGENRICLKTMLEMLNMEFIGRPHCGLDDAKNIARIL 280
Query: 311 ALLMHRGFKFSITNSL 326
+++ G I L
Sbjct: 281 LKMIYDGSNIQINERL 296
>gi|410917872|ref|XP_003972410.1| PREDICTED: ERI1 exoribonuclease 2-like [Takifugu rubripes]
Length = 359
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 18/212 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +VIDFE+TC ++KN Y QEIIEFP+V++++ TG++E+ F TYV+P + LS F
Sbjct: 31 QIFSHLIVIDFESTCWREKNNYSQEIIEFPAVLLNACTGEVESEFHTYVQPQEHPTLSGF 90
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-----------------KGIKNTNFAV-V 234
C +LTGI Q+QV+ G+ L + R +WL+N + N +
Sbjct: 91 CTELTGITQMQVEAGIPLQICMSRFSRWLQNLQMNMGLVFPNNPQMASAAAASRNLCTFL 150
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWS+WD V L+ ECR K+I KP N WI+L+ + + LK A++ G+ + G
Sbjct: 151 TWSDWDLGVCLQYECRRKQIHKPDVLNSWIDLRGTYRLFYDRKPKGLKGALQDLGIQFAG 210
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
R H GLDDA+NTA+L A +M G +T SL
Sbjct: 211 REHSGLDDARNTAQLAARMMRDGCVMKVTRSL 242
>gi|290992875|ref|XP_002679059.1| exonuclease III protein [Naegleria gruberi]
gi|284092674|gb|EFC46315.1| exonuclease III protein [Naegleria gruberi]
Length = 220
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 118/192 (61%), Gaps = 1/192 (0%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F YF+V+DFEA+CD + EIIEFP+V +++ T +++ F YV+P N +L+DF
Sbjct: 12 QKFDYFLVLDFEASCDDKIKNFRNEIIEFPTVAINAKTVKIDHEFHYYVKPKANPILTDF 71
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRF 251
CK+LTGIQQ +D GV + L H++W+ + I KN FA VT +WD + M+ +CR
Sbjct: 72 CKELTGIQQDWIDNGVEFEDVLKFHNQWMMDNFISKNLTFAFVTCGDWDLKTMITKQCRK 131
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ I P YF+ W+N+K + E++ + + + L G+ H G+DD KN AR+L
Sbjct: 132 ENIKVPSYFSSWVNIKKKYTEIYSKHVHGMTDMLNHMKLELIGKHHSGIDDCKNIARILC 191
Query: 312 LLMHRGFKFSIT 323
++ +G + IT
Sbjct: 192 EMLKQGKQIDIT 203
>gi|440791054|gb|ELR12308.1| exonuclease [Acanthamoeba castellanii str. Neff]
Length = 277
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 21/211 (9%)
Query: 137 YFVVIDFEATCDKD--KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
YFVV+D EATCD+D +N YPQEIIEF +V+ S+ T ++E FQ YV+P + +L+ FC
Sbjct: 63 YFVVLDLEATCDEDWNRNFYPQEIIEFSAVLWSTATHEVEDTFQVYVKPLVHPVLTPFCH 122
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI------------------KNTNFAVVTW 236
LTGI Q VD G +L E L +WLE + ++ F + TW
Sbjct: 123 HLTGIHQEWVDNGASLQECLQMFHEWLERHDLLLAPRPTSTMPASTSITTTSSAFWLATW 182
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGR 295
S+WD MLE++C + K PYFN+W++LK + + R L EAV GL W+G
Sbjct: 183 SDWDLGTMLEAQCIRTCLDKEPYFNQWVDLKQLYMRYYSKKFRVKLSEAVASLGLGWEGA 242
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
HC LDD +NT+RLL ++ G +T++L
Sbjct: 243 EHCALDDCRNTSRLLGKIIEHGHPVYLTSAL 273
>gi|390366041|ref|XP_790825.3| PREDICTED: ERI1 exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 631
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 12/210 (5%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +VIDFE+TC KDK QEIIEFP+V++++ TGQLE+ FQ YV P + +LSDF
Sbjct: 33 QTFSYLIVIDFESTCWKDKKNTSQEIIEFPAVLLNTTTGQLESEFQQYVMPDEHPVLSDF 92
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE----------NKGIKNTN--FAVVTWSNWD 240
C +LTGI Q QV+ GV L L + WL+ N+ +T VTWS+WD
Sbjct: 93 CTELTGISQEQVENGVPLFICLNKFTSWLKKIESEKNLAYNRSTDDTRKLCTFVTWSDWD 152
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
V L EC+ K+++KP N WI+ + + + L A++ G+ + GR H GL
Sbjct: 153 LSVCLRYECQRKQLYKPSALNHWIDARAVYRNFYQRKPKGLSGALQEVGIEFAGRQHSGL 212
Query: 301 DDAKNTARLLALLMHRGFKFSITNSLMWQT 330
DDAKNTA L+ ++ G F IT ++ T
Sbjct: 213 DDAKNTAILVWRMIQDGCHFKITKTIQSGT 242
>gi|195585608|ref|XP_002082573.1| GD11641 [Drosophila simulans]
gi|194194582|gb|EDX08158.1| GD11641 [Drosophila simulans]
Length = 281
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 122/210 (58%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC +++ P EIIEFP+V+V+ TG++E+ F Y+ P + L
Sbjct: 60 QPYSYVIAVDFEATCWENQAPPHWREAEIIEFPAVLVNLKTGKIESEFHQYILPIESPRL 119
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVTW 236
S +C +LTGIQQ VD G+ L+ A++ ++WL NK N A VTW
Sbjct: 120 STYCTELTGIQQKTVDSGIPLTTAIVMFNEWLRHEIRTRNLTLPKMNKSNVLGNCAFVTW 179
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K I KP YFN+WI+++ + + CN +A+ GLA++GRA
Sbjct: 180 TDWDFGICLAKECNRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGRA 239
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ +M G FSIT L
Sbjct: 240 HSGIDDAKNLGALMCKMMRDGALFSITKDL 269
>gi|195382354|ref|XP_002049895.1| GJ21843 [Drosophila virilis]
gi|194144692|gb|EDW61088.1| GJ21843 [Drosophila virilis]
Length = 286
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q F Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 65 QPFSYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPR 123
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--------------AVV 234
LS +C +LTGI+Q VD GV L AL+ +WL K ++ N A V
Sbjct: 124 LSTYCTELTGIEQKTVDTGVPLQTALMMFHEWLR-KELRARNLLLPKMSKSNILGNCAFV 182
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TW++WD + L EC K++ K PYFN+WI+++ + E + CN +A+ GLA++G
Sbjct: 183 TWTDWDFGICLHKECTRKRMRKAPYFNQWIDVRAVYREWYKYRPCNFSDALSHVGLAFEG 242
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
RAH G+DDAKN L+ ++ G FSIT L
Sbjct: 243 RAHSGIDDAKNLGALMCKMVRDGALFSITKDL 274
>gi|194882086|ref|XP_001975144.1| GG22157 [Drosophila erecta]
gi|190658331|gb|EDV55544.1| GG22157 [Drosophila erecta]
Length = 223
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q + Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 2 QPYSYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIEAEFHKYILPIESPR 60
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVT 235
LS +C +LTGIQQ VD GV L AL+ +WL NK N A VT
Sbjct: 61 LSTYCTELTGIQQKTVDSGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNIMGNCAFVT 120
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K++ K YFN+WI+++ + + CN +A+E GLA++GR
Sbjct: 121 WTDWDFGICLSKECTRKRMRKAAYFNQWIDVRAVYRSWYQYRPCNFTDALEHVGLAFEGR 180
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L+ ++ G FSIT L
Sbjct: 181 AHSGIDDAKNLGALMCKMVRDGALFSITKDL 211
>gi|126334116|ref|XP_001366655.1| PREDICTED: ERI1 exoribonuclease 2 [Monodelphis domestica]
Length = 696
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC + K+ Y QEIIEFP+V+++++TG++E+ FQTYV+P + +LS
Sbjct: 33 QLFDYLIIIDFESTCWNDGKHHYSQEIIEFPAVLLNTLTGEIESEFQTYVQPEEHPILSK 92
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL----------------ENKGIKNTNFAVVT 235
FC +LTGI+Q QVD GV L L + KW+ N + + A VT
Sbjct: 93 FCIELTGIKQAQVDEGVPLKICLSQFCKWIHLIQQQKKITFAPSITNNSASEVKSCAFVT 152
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 153 WSDWDLGVCLEYECRRKQLRKPIFLNSWIDLRATYKLFYRRKPKGLSGALQELGIEFSGR 212
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 213 EHSGLDDSRNTAHLAWRMIRDGCIMKITKSL 243
>gi|195027065|ref|XP_001986404.1| GH20546 [Drosophila grimshawi]
gi|193902404|gb|EDW01271.1| GH20546 [Drosophila grimshawi]
Length = 288
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 123/211 (58%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q F Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 67 QPFSYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPFESPR 125
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----------KGIKNT---NFAVVT 235
LS +C +LTGI Q VD GV L AL+ +WL K K+ N A VT
Sbjct: 126 LSTYCTELTGIDQKTVDSGVPLQTALMMFHEWLRKELRARNLLLPKMAKSNILGNCAFVT 185
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K++ K PYFN+WI+++ + E + CN +A+ GLA++GR
Sbjct: 186 WTDWDFGICLHKECSRKRMRKAPYFNQWIDVRAIYREWYKYRPCNFTDALSHVGLAFEGR 245
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L+ ++ G FSIT L
Sbjct: 246 AHSGIDDAKNLGALMCKMVRDGALFSITKDL 276
>gi|170051987|ref|XP_001862016.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
gi|167872972|gb|EDS36355.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
Length = 260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 123/212 (58%), Gaps = 15/212 (7%)
Query: 130 FQPQEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+ Q F+Y VV+DFEATC ++D EIIEFP+V+++ VTGQ+EA FQ +V P N
Sbjct: 41 YSTQTFRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQFQQFVMPVENP 100
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVV 234
LS+FC LTGI+Q QV+ GV L L KWL+ + G ++ + A
Sbjct: 101 RLSEFCTKLTGIRQDQVEGGVPLKTCLPLFGKWLKQVLGERGLVLPKTDPGNQSGSVAFA 160
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWS+WD L EC K+I KP F++WI+++ + + + N EA++ GL ++G
Sbjct: 161 TWSDWDFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHRPLNFGEALDKRGLGFEG 220
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
R H GLDD+KN ARL+ + G F IT L
Sbjct: 221 RPHSGLDDSKNLARLITRMCKDGANFVITKDL 252
>gi|432847752|ref|XP_004066132.1| PREDICTED: ERI1 exoribonuclease 2-like [Oryzias latipes]
Length = 504
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 18/212 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +VIDFE+TC ++KN QEIIEFP+V++++ TG +++ F T+V+P + LS+F
Sbjct: 30 QIFSYLIVIDFESTCWREKNTSSQEIIEFPAVLLNTSTGDIDSEFHTFVQPQEHPTLSEF 89
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIK------------NTNFAV------V 234
C +LTGI Q+QV+ G+ L L R +WL++ ++ +++ + +
Sbjct: 90 CTELTGITQVQVEAGLPLQICLSRFTRWLQSLQLEMGFTFPNKQQGSSSSLSTQKLCTFL 149
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWS+WD V L+ EC+ K++ KP FN WI+L+ + + L A++ GL + G
Sbjct: 150 TWSDWDLGVCLQYECKRKQLHKPDVFNNWIDLRSTYRLWYNRKPKGLNGALQDLGLQFDG 209
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
R H GLDDA+NTARL A +M G IT SL
Sbjct: 210 REHSGLDDARNTARLAAKMMRDGCVMKITRSL 241
>gi|170053941|ref|XP_001862902.1| exonuclease [Culex quinquefasciatus]
gi|167874372|gb|EDS37755.1| exonuclease [Culex quinquefasciatus]
Length = 369
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 123/212 (58%), Gaps = 15/212 (7%)
Query: 130 FQPQEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+ Q F+Y VV+DFEATC ++D EIIEFP+V+++ VTGQ+EA FQ +V P N
Sbjct: 150 YSTQTFRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQFQQFVMPVENP 209
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVV 234
LS+FC LTGI+Q QV+ GV L L KWL+ + G ++ + A
Sbjct: 210 RLSEFCTKLTGIRQDQVEGGVPLKTCLPLFGKWLKQVLGERGLVLPKTDPGNQSGSVAFA 269
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TWS+WD L EC K+I KP F++WI+++ + + + N EA++ GL ++G
Sbjct: 270 TWSDWDFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHRPLNFGEALDKRGLGFEG 329
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
R H GLDD+KN ARL+ + G F IT L
Sbjct: 330 RPHSGLDDSKNLARLITRMCKDGANFVITKDL 361
>gi|427781641|gb|JAA56272.1| Putative eri1 exoribonuclease 3 [Rhipicephalus pulchellus]
Length = 256
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + YF+++DFEATC +K P PQEIIEFP + V+ T + E+ F TYV+P + L+
Sbjct: 67 QAYDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQAHPQLTA 126
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FC +LTGI Q VD L E L R D W+ +G+ +T+ +WD + ML S+C +
Sbjct: 127 FCTELTGIVQDMVDDQPHLQEVLSRFDDWMREQGLLQARTVFITFGDWDLQKMLPSQCAY 186
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I PPY RWINLK F E G L +A+ L GR H G+DD +N +L+A
Sbjct: 187 LGIPVPPYMTRWINLKRAFAECTGHWPKTLLDALRFCRLPHLGRHHSGIDDCRNLTQLVA 246
Query: 312 LLMHRGFKFS 321
L RG++F+
Sbjct: 247 WLASRGYQFA 256
>gi|443705651|gb|ELU02084.1| hypothetical protein CAPTEDRAFT_224647 [Capitella teleta]
Length = 394
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 12/206 (5%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +V+DFE+TC +D PQEIIEFP+V++++ G++EA FQ YV P +LS F
Sbjct: 33 QPFAYLIVLDFESTCWQDTKFKPQEIIEFPAVLLNTSNGEIEAHFQKYVVPLEYPILSAF 92
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNF-----------AVVTWSNWD 240
C+ LTGI Q QVD G+ ++ L WL+ K +N F VTWS+WD
Sbjct: 93 CQQLTGITQAQVDDGIPINHCLRSFTTWLQKIKQERNLVFNSVTDATSKGCTFVTWSDWD 152
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
V L +ECR K++ P N WI+L+ + +G L +++ G+ + GR HCGL
Sbjct: 153 LGVCLRNECRRKQLRCPAELNSWIDLRAAYKTFYGRQPNGLNGSLKDLGMDYDGREHCGL 212
Query: 301 DDAKNTARLLALLMHRGFKFSITNSL 326
DDAKNTA+L +M G +IT +L
Sbjct: 213 DDAKNTAKLAWRMMCDGCILNITKTL 238
>gi|195346611|ref|XP_002039851.1| GM15878 [Drosophila sechellia]
gi|194135200|gb|EDW56716.1| GM15878 [Drosophila sechellia]
Length = 281
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 119/210 (56%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC +++ P EIIEFP+V+V+ TG++EA F Y+ P + L
Sbjct: 60 QPYSYVIAVDFEATCWENQAPPHWREAEIIEFPAVLVNLKTGKIEAEFHQYILPIESPRL 119
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-------------KGIKNTNFAVVTW 236
S +C +LTGIQQ VD G+ L A++ +WL N K N A VTW
Sbjct: 120 STYCTELTGIQQKTVDSGIPLQTAMVMFHEWLRNEMRARNLTLPKTNKSNILGNCAFVTW 179
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K I K YFN+WI+++ + + CN +A+ GLA++GRA
Sbjct: 180 TDWDFGICLAKECNRKGIRKAAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGRA 239
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ +M G FSIT L
Sbjct: 240 HSGIDDAKNLGALMCKMMRDGALFSITKDL 269
>gi|391342996|ref|XP_003745801.1| PREDICTED: ERI1 exoribonuclease 3-like [Metaseiulus occidentalis]
Length = 245
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 112/196 (57%), Gaps = 1/196 (0%)
Query: 133 QEFQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F F+V+DFEATC++ P+PQEIIEFP + +S+ T + + F TYVRP + LSD
Sbjct: 47 QVFSNFLVMDFEATCNRAGPKPFPQEIIEFPVLNLSADTFEEVSRFHTYVRPDVHPELSD 106
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FC +LTGI Q V+ L E L +KWLE+ G+ N VT+ NWD L+ +C +
Sbjct: 107 FCTELTGIMQSMVEDQPNLEETLKLFEKWLEDNGLNTENSIPVTFGNWDLATALKRQCSY 166
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I PP +WIN+K P + L +E AGL +QGRAH G+DD N A+LL
Sbjct: 167 LGIDVPPILQQWINIKYPIFYFWRSWPRGLSHCLEKAGLEFQGRAHSGIDDCTNIAQLLK 226
Query: 312 LLMHRGFKFSITNSLM 327
L R F TN M
Sbjct: 227 YLGERNMIFKPTNKGM 242
>gi|195122902|ref|XP_002005949.1| GI18816 [Drosophila mojavensis]
gi|193911017|gb|EDW09884.1| GI18816 [Drosophila mojavensis]
Length = 223
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 20/212 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q F + + +DFEATC + + P PQ EIIEFP+V+V+ TG++E+ F YV P +
Sbjct: 2 QPFSHVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIESEFHKYVMPIESPR 60
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--------------AVV 234
LS +C +LTGI+Q VD GV L AL+ +WL K +++ N A V
Sbjct: 61 LSTYCTELTGIEQKTVDTGVPLQTALMMFHEWLR-KELRSRNLILPKTSKSNLLGNCAFV 119
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
TW++WD + L EC K++ K PYFN+W++++ + E + CN +A+ GLA++G
Sbjct: 120 TWTDWDFGICLHKECTRKRMRKAPYFNQWVDVRAIYREWYKYRPCNFSDALSHVGLAFEG 179
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
RAH G+DDAKN L+ ++ G FSIT L
Sbjct: 180 RAHSGIDDAKNLGALMYKMVRDGALFSITKDL 211
>gi|194756028|ref|XP_001960281.1| GF13284 [Drosophila ananassae]
gi|190621579|gb|EDV37103.1| GF13284 [Drosophila ananassae]
Length = 284
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q + Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 63 QPYTYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPR 121
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVT 235
LS +C +LTGIQQ VD GV L AL+ +WL NK N A VT
Sbjct: 122 LSTYCTELTGIQQKTVDGGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVT 181
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K++ K YFN+WI+++ + + CN +A+ GLA++GR
Sbjct: 182 WTDWDFGICLAKECTRKRMRKAAYFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLAFEGR 241
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L+ ++ G FSIT L
Sbjct: 242 AHSGIDDAKNLGALMCKMVSDGALFSITKDL 272
>gi|332224715|ref|XP_003261514.1| PREDICTED: ERI1 exoribonuclease 2 [Nomascus leucogenys]
Length = 689
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKSCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|383415517|gb|AFH30972.1| ERI1 exoribonuclease 2 isoform 1 [Macaca mulatta]
Length = 690
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|363739793|ref|XP_424602.3| PREDICTED: ERI1 exoribonuclease 2 [Gallus gallus]
Length = 671
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 122/209 (58%), Gaps = 16/209 (7%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
EF + +V+DFE+TC +D EIIEFP+V++++ TG++EA F T+V+P +LS+FC
Sbjct: 20 EFDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQEQPVLSEFC 79
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNF-----------AVVTWS 237
LTG+ Q QVD GV L L + KWL E K + +++ VTW+
Sbjct: 80 TTLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCTFVTWT 139
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
+WD V L EC+ K++WKP FN WI+LK + + L A++ GLA+ GR H
Sbjct: 140 DWDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPKGLSGALQYVGLAFVGREH 199
Query: 298 CGLDDAKNTARLLALLMHRGFKFSITNSL 326
GLDD++NTARL L+ G IT SL
Sbjct: 200 SGLDDSRNTARLAWRLICDGCVLKITKSL 228
>gi|395514593|ref|XP_003761499.1| PREDICTED: ERI1 exoribonuclease 2 [Sarcophilus harrisii]
Length = 685
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC + K Y QEIIEFP+V+++++TG++E+ FQTYV+P + +LS
Sbjct: 33 QLFDYLIIIDFESTCWNDGKRHYSQEIIEFPAVLLNTLTGEIESEFQTYVQPEEHPVLSK 92
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----------------NKGIKNTNFAVVT 235
FC +LTGI+Q QVD GV L L + KW++ N A VT
Sbjct: 93 FCVELTGIKQAQVDEGVPLKICLSQFCKWIQVIQQQKKIIFAPSVRDNSASDVKLCAFVT 152
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N W++L+ + + L A++ G+ + GR
Sbjct: 153 WSDWDLGVCLEYECRRKQLRKPVFLNSWVDLRATYKIFYRRKPKGLSGALQELGIEFSGR 212
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 213 EHSGLDDSRNTAHLAWRMIRDGCIMKITKSL 243
>gi|297283615|ref|XP_001084714.2| PREDICTED: ERI1 exoribonuclease 2-like [Macaca mulatta]
gi|355710023|gb|EHH31487.1| ERI1 exoribonuclease 2 [Macaca mulatta]
Length = 690
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|402907864|ref|XP_003916681.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 2 [Papio
anubis]
Length = 690
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|355756611|gb|EHH60219.1| ERI1 exoribonuclease 2 [Macaca fascicularis]
Length = 690
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|426381460|ref|XP_004057358.1| PREDICTED: ERI1 exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 691
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|326492964|dbj|BAJ90338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
Query: 201 QIQVDRGVTLSEALLRHDKWLENKGIKNTN-----FAVVTWSNWDCRVMLESECRFKKIW 255
Q VD GV L EAL HD WL+ N AVVTW +WDCR MLE ECRFK I
Sbjct: 19 QEDVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIE 78
Query: 256 KPPYFNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
KP YF++WINL+VPF GG R NL+EAV AGL W+GR HCGLDDA NTARLLA +M
Sbjct: 79 KPSYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIM 138
Query: 315 HRGFKFSITNSLM 327
RG K +IT SL+
Sbjct: 139 RRGVKMTITGSLV 151
>gi|301784463|ref|XP_002927641.1| PREDICTED: ERI1 exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 679
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QFFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNF-----------AVVT 235
FC +LTGI+Q QVD GV L L + KW+ E K I T A VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + +G L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPKGLSGALQEVGIEFLGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|301604764|ref|XP_002932007.1| PREDICTED: ERI1 exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 693
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F+Y ++IDFE+TC KD QEIIEFP+V+++ G++E+ F TYV+P + +LS+F
Sbjct: 33 QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVANGEIESEFHTYVQPQEHPILSEF 92
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----KGI------------KNTNFAVVTW 236
C +LTGI+Q+QVD GV L L + + W++ KGI ++ A VTW
Sbjct: 93 CTELTGIKQLQVDNGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSAAEHKMCAFVTW 152
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
S+WD V L ECR K++ KP N WI+L+ + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA+L ++ G IT SL
Sbjct: 213 HSGLDDSRNTAKLAWRMIRDGCVMKITKSL 242
>gi|281339701|gb|EFB15285.1| hypothetical protein PANDA_017444 [Ailuropoda melanoleuca]
Length = 672
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 25 QFFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 84
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNF-----------AVVT 235
FC +LTGI+Q QVD GV L L + KW+ E K I T A VT
Sbjct: 85 FCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAEVKLCAFVT 144
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + +G L A++ G+ + GR
Sbjct: 145 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPKGLSGALQEVGIEFLGR 204
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 205 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 235
>gi|195486290|ref|XP_002091443.1| GE12237 [Drosophila yakuba]
gi|194177544|gb|EDW91155.1| GE12237 [Drosophila yakuba]
Length = 223
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q + Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 2 QPYTYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKIEAEFHKYILPFESPR 60
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVT 235
LS +C +LTGIQQ VD GV L AL+ +WL NK N A VT
Sbjct: 61 LSTYCTELTGIQQKTVDSGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNILGNCAFVT 120
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K++ K YFN+WI+++ + + CN +A+ GLA++GR
Sbjct: 121 WTDWDFGICLAKECTRKRMRKAAYFNQWIDVRAIYRSWYQYRPCNFTDALSHVGLAFEGR 180
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L+ ++ G FSIT L
Sbjct: 181 AHSGIDDAKNLGALMCKMVRDGALFSITKDL 211
>gi|332845430|ref|XP_003315043.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan troglodytes]
gi|410218774|gb|JAA06606.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410257124|gb|JAA16529.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410290502|gb|JAA23851.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
Length = 691
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|302844761|ref|XP_002953920.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
gi|300260732|gb|EFJ44949.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
Length = 201
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 119/190 (62%), Gaps = 3/190 (1%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
F+V+D EATC K ++ YP EIIE ++++ + + FQ++VRPT + LL FC +LT
Sbjct: 3 FLVLDLEATCTKCRSLYPIEIIEVSALLLDAHSLATLGEFQSHVRPTEHPLLDPFCVELT 62
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIW 255
GI+Q QVD L + LLR +WLE G + VTW++WD ++ LE+EC ++++
Sbjct: 63 GIEQEQVDTAPLLGDVLLRFQQWLEGLGAFGGAKSLLPVTWTDWDLKICLETECGWRQLP 122
Query: 256 KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH 315
+PPY RW NLK + + +L++ VE GL WQGRAH GLDD++NTA L ++
Sbjct: 123 RPPYLRRWCNLKRVYGARYRRAS-SLQKCVEALGLRWQGRAHNGLDDSRNTAMLAVRMVR 181
Query: 316 RGFKFSITNS 325
G ++T+S
Sbjct: 182 DGCVLTVTDS 191
>gi|218505680|ref|NP_001136197.1| ERI1 exoribonuclease 2 isoform 1 [Homo sapiens]
gi|190359336|sp|A8K979.2|ERI2_HUMAN RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|119587241|gb|EAW66837.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_b [Homo sapiens]
Length = 691
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|332845434|ref|XP_003315045.1| PREDICTED: ERI1 exoribonuclease 2 isoform 3 [Pan troglodytes]
gi|397481790|ref|XP_003812120.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 328
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 26/228 (11%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDG-----SLTWN 338
H GLDD++NTA L ++ G IT SL N G S TWN
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL----NKGPFLLPSWTWN 255
>gi|148227894|ref|NP_001089039.1| ERI1 exoribonuclease 2 [Xenopus laevis]
gi|82179168|sp|Q5HZL1.1|ERI2_XENLA RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|57032602|gb|AAH88972.1| Exod1 protein [Xenopus laevis]
Length = 687
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 123/210 (58%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F+Y ++IDFE+TC KD QEIIEFP+V+++ G++E+ F TYV+P + +LSDF
Sbjct: 33 QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDF 92
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----KGI------------KNTNFAVVTW 236
C +LTGI Q QVD GV L L + + W++ KGI ++ A VTW
Sbjct: 93 CTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTW 152
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
S+WD V L ECR K++ KP N WI+L+ + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA+L + ++ G IT SL
Sbjct: 213 HSGLDDSRNTAKLASRMICDGCVMKITKSL 242
>gi|218505674|ref|NP_542394.2| ERI1 exoribonuclease 2 isoform 2 [Homo sapiens]
gi|119587240|gb|EAW66836.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_a [Homo sapiens]
Length = 328
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 26/228 (11%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDG-----SLTWN 338
H GLDD++NTA L ++ G IT SL N G S TWN
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL----NKGPFLLPSWTWN 255
>gi|221330522|ref|NP_726151.2| snipper, isoform G [Drosophila melanogaster]
gi|159884093|gb|ABX00725.1| IP11159p [Drosophila melanogaster]
gi|220902332|gb|AAM68201.2| snipper, isoform G [Drosophila melanogaster]
Length = 384
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC + + P EIIEFP+V+V+ TG++EA F Y+ P + L
Sbjct: 163 QPYSYVIAVDFEATCWEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRL 222
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-------------KGIKNTNFAVVTW 236
S +C +LTGIQQ VD G+ L A++ ++WL N K N A VTW
Sbjct: 223 SAYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTW 282
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K I KP YFN+WI+++ + + CN +A+ GLA++G+A
Sbjct: 283 TDWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKA 342
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ ++ G FSIT L
Sbjct: 343 HSGIDDAKNLGALMCKMVRDGALFSITKDL 372
>gi|28573607|ref|NP_611632.3| snipper, isoform D [Drosophila melanogaster]
gi|16769080|gb|AAL28759.1| LD16074p [Drosophila melanogaster]
gi|28380656|gb|AAM68199.2| snipper, isoform D [Drosophila melanogaster]
gi|220943044|gb|ACL84065.1| CG42257-PD [synthetic construct]
gi|220953182|gb|ACL89134.1| CG42257-PD [synthetic construct]
Length = 281
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC + + P EIIEFP+V+V+ TG++EA F Y+ P + L
Sbjct: 60 QPYSYVIAVDFEATCWEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRL 119
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-------------KGIKNTNFAVVTW 236
S +C +LTGIQQ VD G+ L A++ ++WL N K N A VTW
Sbjct: 120 SAYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTW 179
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K I KP YFN+WI+++ + + CN +A+ GLA++G+A
Sbjct: 180 TDWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKA 239
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ ++ G FSIT L
Sbjct: 240 HSGIDDAKNLGALMCKMVRDGALFSITKDL 269
>gi|14714721|gb|AAH10503.1| Exoribonuclease 2 [Homo sapiens]
gi|123996651|gb|ABM85927.1| exonuclease domain containing 1 [synthetic construct]
gi|123996653|gb|ABM85928.1| exonuclease domain containing 1 [synthetic construct]
gi|307684634|dbj|BAJ20357.1| ERI1 exoribonuclease family member 2 [synthetic construct]
Length = 328
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 26/228 (11%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDG-----SLTWN 338
H GLDD++NTA L ++ G IT SL N G S TWN
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL----NKGPFLLPSWTWN 255
>gi|34534279|dbj|BAC86956.1| unnamed protein product [Homo sapiens]
Length = 279
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|332845432|ref|XP_003315044.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan troglodytes]
gi|397481788|ref|XP_003812119.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan paniscus]
Length = 279
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242
>gi|24657520|ref|NP_726149.1| snipper, isoform F [Drosophila melanogaster]
gi|24657528|ref|NP_726150.1| snipper, isoform E [Drosophila melanogaster]
gi|10727027|gb|AAF46791.2| snipper, isoform E [Drosophila melanogaster]
gi|21626519|gb|AAM68200.1| snipper, isoform F [Drosophila melanogaster]
Length = 223
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC + + P EIIEFP+V+V+ TG++EA F Y+ P + L
Sbjct: 2 QPYSYVIAVDFEATCWEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRL 61
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-------------KGIKNTNFAVVTW 236
S +C +LTGIQQ VD G+ L A++ ++WL N K N A VTW
Sbjct: 62 SAYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K I KP YFN+WI+++ + + CN +A+ GLA++G+A
Sbjct: 122 TDWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ ++ G FSIT L
Sbjct: 182 HSGIDDAKNLGALMCKMVRDGALFSITKDL 211
>gi|291390710|ref|XP_002711856.1| PREDICTED: exoribonuclease 2 [Oryctolagus cuniculus]
Length = 689
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q FQY +VIDFE+TC + K+ + QEIIEFP+V++++ TG++E+ F TYV+P + +LS+
Sbjct: 32 QLFQYLIVIDFESTCWNDGKHHHNQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNFA-----------VVT 235
FC +LTGI+Q QVD GV L L + KW+ + K + +T + VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIVFSTGVSEPSSSEVQPCTFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|221132558|ref|XP_002167097.1| PREDICTED: 3'-5' exoribonuclease 1-like [Hydra magnipapillata]
Length = 287
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
Query: 137 YFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y+VVIDFEATCD + NP + EIIEFP+V+V + T ++ + F +Y RP N +LS+FCK
Sbjct: 96 YYVVIDFEATCD-EPNPSGFQHEIIEFPAVLVKTSTLEIVSEFHSYCRPVINPVLSEFCK 154
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LTGI Q+QV+ L R DKWL+ + + F + T WD L+++C+ I
Sbjct: 155 SLTGITQVQVESSSVFEVVLQRFDKWLKQQVMPTETFCIATDGPWDLDRFLKNQCKTLNI 214
Query: 255 WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P YF+RW+N++ F+ + + N++ ++ G+ ++GR H G+DDA+N AR+L L+
Sbjct: 215 QIPHYFHRWVNIRKHFYNYYKINQANVELMLQHLGMEFEGRPHRGIDDARNIARILIQLI 274
Query: 315 HRGFKFSITNSL 326
G I SL
Sbjct: 275 RDGADPLINESL 286
>gi|354499797|ref|XP_003511992.1| PREDICTED: ERI1 exoribonuclease 2 [Cricetulus griseus]
Length = 687
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 124/210 (59%), Gaps = 16/210 (7%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +VIDFE+TC KD K+ EIIEFP+V++S+ TG++E+ F YV+P + +LS+
Sbjct: 32 QVYDYLIVIDFESTCWKDGKHHNSPEIIEFPAVLLSTATGEIESEFHAYVQPQEHPVLSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTN----------FAVVTW 236
FC +LTGI+Q+QVD GV L L + KW+ + K I T A VTW
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKIQQQKKIILATGDLEPSTEVKLCAFVTW 151
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
S+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 SDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYKLFYKRKPKGLSGALQEVGIEFSGRE 211
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 HSGLDDSRNTALLAWKMIRDGCLMKITRSL 241
>gi|296219709|ref|XP_002756006.1| PREDICTED: ERI1 exoribonuclease 2 [Callithrix jacchus]
Length = 687
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFAAGVSEPSTSEVNLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIKDGCLMKITRSL 242
>gi|195431874|ref|XP_002063953.1| GK15944 [Drosophila willistoni]
gi|194160038|gb|EDW74939.1| GK15944 [Drosophila willistoni]
Length = 281
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 121/211 (57%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q + Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F Y+ P +
Sbjct: 60 QPYSYVIAVDFEATCWEKQAP-PQWREAEIIEFPAVLVNLKTGKVEAEFHKYIMPIESPR 118
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVT 235
LS +C +LTGIQQ VD G+ L AL+ +WL +K N A VT
Sbjct: 119 LSSYCTELTGIQQKTVDNGIPLQTALMMFHEWLRKELRARNLVLPKMSKSNILGNCAFVT 178
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K++ K YFN+WI+++ + E + CN +A+ GLA++GR
Sbjct: 179 WTDWDFGICLAKECSRKRMRKAVYFNQWIDVRAIYREWYKYRPCNFSDALAHVGLAFEGR 238
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L ++ G F+IT L
Sbjct: 239 AHSGIDDAKNLGSLTCKMVRDGALFAITKDL 269
>gi|345305381|ref|XP_001508438.2| PREDICTED: ERI1 exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 757
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ Y QEIIEFP+V++++ TG++E+ FQ YV+P + +LS+
Sbjct: 33 QLFDYLIVIDFESTCWNDGKHHYSQEIIEFPAVLLNTSTGEIESEFQCYVQPQEHPILSE 92
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----------NKGIKN------TNFAVVT 235
FC +LTGI+Q QVD GV L L + KW++ GI N + A VT
Sbjct: 93 FCIELTGIKQAQVDEGVPLKICLSQFCKWIQMIQQKKKIIFAPGISNPATSEVKSCAFVT 152
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP N WI+L+ + + L A++ GL + G+
Sbjct: 153 WSDWDLGVCLEYECKRKQLRKPEILNSWIDLRATYKLFYMRKPKGLSGALQDLGLKFSGQ 212
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 213 EHSGLDDSRNTAHLAWRMIGDGCIMKITKSL 243
>gi|195154276|ref|XP_002018048.1| GL16972 [Drosophila persimilis]
gi|198460377|ref|XP_002138824.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
gi|194113844|gb|EDW35887.1| GL16972 [Drosophila persimilis]
gi|198136995|gb|EDY69382.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 18/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
Q + Y + +DFEATC + + P PQ EIIEFP+V+V+ TG++EA F TYV P +
Sbjct: 2 QPYTYAISVDFEATCWEKQAP-PQWRESEIIEFPAVLVNLKTGKVEAEFHTYVMPLESPR 60
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNT------------NFAVVT 235
LS++C +LTGIQQ V+ GV L AL +WL N+ ++N N A VT
Sbjct: 61 LSNYCTELTGIQQKTVEAGVPLQTALNLFCEWLRNELRVRNLVLPKTNKSNILGNCAFVT 120
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD + L EC K+I KP FN+WI+ + + E + CN +A+ LA++GR
Sbjct: 121 WTDWDFGICLAKECTRKRIRKPACFNQWIDARAIYREWYKYRPCNFADALSHVDLAFEGR 180
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
AH G+DDAKN L+ ++ G FSIT L
Sbjct: 181 AHSGIDDAKNLGALICKMVRDGALFSITKDL 211
>gi|358336849|dbj|GAA55310.1| ERI1 exoribonuclease 3 [Clonorchis sinensis]
Length = 230
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 100 SFESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEII 159
SFE F+ E+ A +N + + + Q+F+YF+V+DFEATC++++ P EII
Sbjct: 5 SFERIFFILFAESMSNLA-FNAVRRSA---LKSQKFKYFLVLDFEATCERNRKLRPAEII 60
Query: 160 EFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDK 219
EFP V ++S T E+ F Y++P + L+DFC +LTGI Q VD L E L D+
Sbjct: 61 EFPVVKLNSQTLLEESIFHHYIQPVFHPELTDFCTELTGIIQDMVDNQPRLEEVLQLFDE 120
Query: 220 WLENKGIKNT--NFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV 277
WL + + T F VT +WD R ML S+CR I P YF +WIN+K F +V G
Sbjct: 121 WLVKEKLTGTENTFTFVTCGDWDLRTMLPSQCRELGIPVPHYFRQWINIKQTFQDVRGLF 180
Query: 278 RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+L + L QGR H G+DDA+N A +L L+ G IT SL
Sbjct: 181 PHSLPHMLSDLDLPLQGRHHSGIDDARNIATVLCQLIKLGAVPDITGSL 229
>gi|403277084|ref|XP_003930207.1| PREDICTED: ERI1 exoribonuclease 2 [Saimiri boliviensis boliviensis]
Length = 690
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 121/211 (57%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K + QEIIEFP+V++++ TGQ+E+ F YV+P +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFHAYVQPQEQPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----------KGIKNTNF------AVVT 235
FC +LTGI+Q QVD GV L L + KW+ G+ + A VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIIFAAGVSEPSTSEVNLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRSTYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|344294294|ref|XP_003418853.1| PREDICTED: ERI1 exoribonuclease 2 [Loxodonta africana]
Length = 684
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+ ++++ TG++E+ F +V+P + LLS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAALLNTSTGEIESEFHAFVQPQEHPLLSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKW----------------LENKGIKNTNFAVVT 235
FC +LTGI+Q+QVD GV L L + KW L+ K A VT
Sbjct: 92 FCMELTGIKQVQVDEGVPLKICLSQFCKWIHKIQQQKKIFFATEVLDPSSSKVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYKRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTAHLAWKMIRDGCLMKITRSL 242
>gi|26325030|dbj|BAC26269.1| unnamed protein product [Mus musculus]
Length = 688
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC + K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VT 235
FC +LTGI+Q+QVD GV L L + KW+ + T +FA VT
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRNGCLMKITRSL 242
>gi|61098180|ref|NP_081974.3| ERI1 exoribonuclease 2 [Mus musculus]
gi|81888440|sp|Q5BKS4.1|ERI2_MOUSE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|60688299|gb|AAH90961.1| Exonuclease domain containing 1 [Mus musculus]
gi|74138480|dbj|BAE38055.1| unnamed protein product [Mus musculus]
gi|74189274|dbj|BAE22676.1| unnamed protein product [Mus musculus]
Length = 688
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC + K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VT 235
FC +LTGI+Q+QVD GV L L + KW+ + T +FA VT
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|348584174|ref|XP_003477847.1| PREDICTED: ERI1 exoribonuclease 2-like [Cavia porcellus]
Length = 690
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +VIDFE+TC + K+ QEIIEFP+V++++ TG++E+ F TYV+P + +LS+
Sbjct: 32 QLYDYIIVIDFESTCWNDGKHHNSQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPVLSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----------NKGIKNTNF------AVVT 235
FC +LTGI+Q QVD GV L L + KW+ GI + A VT
Sbjct: 92 FCIELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIFFTTGISEPSTCEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIKDGCLMKITKSL 242
>gi|74141341|dbj|BAE35962.1| unnamed protein product [Mus musculus]
Length = 636
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC + K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VT 235
FC +LTGI+Q+QVD GV L L + KW+ + T +FA VT
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|327284033|ref|XP_003226743.1| PREDICTED: ERI1 exoribonuclease 2-like [Anolis carolinensis]
Length = 260
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 121/211 (57%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC D+ Y QEIIEFP+V++++ G++E+ F YV+P + LLS+
Sbjct: 33 QLFDYLIIIDFESTCWNDRRKCYSQEIIEFPAVLLNTSDGEIESEFHMYVQPQEHPLLSE 92
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNF---------------AVVT 235
FC +LTGI Q QVD GV L L + KW++ + KN F A VT
Sbjct: 93 FCTELTGITQSQVDDGVPLHICLSQFSKWIQKIQKEKNIIFTSGHSSCAASEGKLCAFVT 152
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V L EC+ K++ KP N WI+L+ + + LK A++ G+ + GR
Sbjct: 153 WSDWDLGVCLHYECKRKQLRKPDILNSWIDLRATYKVFYSRKPQGLKGALQDVGIIFAGR 212
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT +L
Sbjct: 213 EHSGLDDSRNTAHLAWRMIRDGCVMKITKTL 243
>gi|432119658|gb|ELK38559.1| ERI1 exoribonuclease 2 [Myotis davidii]
Length = 698
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 124/210 (59%), Gaps = 17/210 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC ++ K QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 45 QLFDYLIVIDFESTCWEEGKRHRTQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 104
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-----KGIKNTNF-----------AVVT 235
FC +LTGI+Q QVD GV L L + KW++ K I T A VT
Sbjct: 105 FCMELTGIKQAQVDEGVPLKICLSQFCKWIQKVQQQKKIIFATGVSDLPTSEVKLCAFVT 164
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K+++KP + N WI+L+V + + L A++ G+ + GR
Sbjct: 165 WSDWDLGVCLEYECKRKQLFKPVFLNAWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGR 224
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNS 325
H GLDD++NTA L ++ G IT S
Sbjct: 225 EHSGLDDSRNTALLAWKMIRDGCLMKITRS 254
>gi|300798138|ref|NP_001178043.1| ERI1 exoribonuclease 2 [Rattus norvegicus]
Length = 687
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC + K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q+QVD GV L L + KW+ + K +FA VT
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQKKISFATGDSEPSTPEVKPCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYNRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|158253677|gb|AAI54112.1| LOC100127672 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 4/199 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F TYV+P +
Sbjct: 72 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQ 130
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD TLS+ L R D+W+ +G+ + + VT +WD ++ML
Sbjct: 131 LTPFCTELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLP 190
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C + + YF +WINLK + G + L + + L GR H G+DD +N
Sbjct: 191 GQCEYLGLQVADYFKQWINLKKAYSFAIGTWPKNGLLDMNKGMSLQHIGRPHSGIDDCRN 250
Query: 306 TARLLALLMHRGFKFSITN 324
A ++ L HRGF F T+
Sbjct: 251 IANIMKTLAHRGFIFKQTS 269
>gi|387913954|gb|AFK10586.1| prion protein interacting protein [Callorhinchus milii]
Length = 276
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + F+V+DFEA CDK+ PQEIIEFP V + T ++++ F TYV+P + L
Sbjct: 77 FPPQLYHNFLVLDFEAACDKELIK-PQEIIEFPVVRLHGRTLEIQSVFHTYVQPEAHPQL 135
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD TL AL D+W++N+G+ N N VT +WD R ML
Sbjct: 136 TPFCTELTGIVQSMVDGQPTLQRALQMVDEWMKNEGLLDPNVNSIFVTCGDWDLRKMLPG 195
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C++ K+ P YF +WINLK + + L VE L+ GR H G+DD KN
Sbjct: 196 QCQYLKLPVPDYFKKWINLKKAYGTAMETYPKSGLPCMVEGLALSHIGRLHSGIDDCKNI 255
Query: 307 ARLLALLMHRGFKFSITNS 325
A ++ L +GF F T S
Sbjct: 256 ANIMKELARKGFIFKETGS 274
>gi|146327084|gb|AAI41731.1| LOC100049744 protein [Xenopus laevis]
Length = 273
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 4/199 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F TYV+P +
Sbjct: 73 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQ 131
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD TLS+ L R D+W+ +G+ + + VT +WD ++ML
Sbjct: 132 LTPFCTELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLP 191
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C + + YF +WINLK + G + L + + L GR H G+DD +N
Sbjct: 192 GQCEYLGLQVADYFKQWINLKKAYSFAIGTWPKNGLLDMNKGMSLQHIGRPHSGIDDCRN 251
Query: 306 TARLLALLMHRGFKFSITN 324
A ++ L HRGF F T+
Sbjct: 252 IANIMKTLAHRGFIFKQTS 270
>gi|12855883|dbj|BAB30489.1| unnamed protein product [Mus musculus]
Length = 274
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC D K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VT 235
FC +LTGI+Q+QVD GV L L + KW+ + T +FA VT
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE ECR K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|242078555|ref|XP_002444046.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
gi|241940396|gb|EES13541.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
Length = 122
Score = 148 bits (373), Expect = 5e-33, Method: Composition-based stats.
Identities = 70/118 (59%), Positives = 83/118 (70%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +FVVIDFEATC + YPQEIIEF SV+V TG+ + F+TYVRP + L+DF +
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFTSVLVDGATGRTLSTFRTYVRPRHHPCLTDFYR 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
DLTGI Q VD GV+L+EAL HD+WLE G K AVVTW +WDCR M E ECRFK
Sbjct: 62 DLTGITQDDVDAGVSLAEALEMHDRWLEEHGAKLGKLAVVTWGDWDCRTMPEGECRFK 119
>gi|327271053|ref|XP_003220302.1| PREDICTED: ERI1 exoribonuclease 3-like [Anolis carolinensis]
Length = 229
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 115 QFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE 174
+ A + + A F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E
Sbjct: 15 KLASHGFASMAAMSSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIE 73
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA-- 232
+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + +
Sbjct: 74 STFHMYVQPVVHSQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSI 133
Query: 233 VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLA 291
VT +WD +VML +C++ + YF +WINLK + G + L + + L
Sbjct: 134 FVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQ 193
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
GR H G+DD KN A ++ L HRGF F T+
Sbjct: 194 HIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTS 226
>gi|443697836|gb|ELT98134.1| hypothetical protein CAPTEDRAFT_225969 [Capitella teleta]
Length = 212
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F+ Q F YF+V+DFEATCD PQEIIEFP + V++ T ++E+ F YV P ++ L
Sbjct: 13 FKEQNFDYFLVLDFEATCDDKVQVDPQEIIEFPVLKVNAKTFEVESTFHQYVEPRVHKQL 72
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN--TNFAVVTWSNWDCRVMLES 247
S FC +LTGI Q VD L L KW++++G+ N F VT +WD + ML S
Sbjct: 73 SPFCVELTGIIQDMVDGQQHLEAVLGDFQKWMQDEGLLNEGVKFIFVTCGDWDLKKMLPS 132
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+ ++ I P + WIN+K PF +V G + ++ E ++ +A GR H G+DD KN
Sbjct: 133 QAKYFDIAYPDHMKSWINIKRPFTDVVGQYPKNDMMEMLQKLNIAHTGRHHSGIDDCKNI 192
Query: 307 ARLLALLMHRGFKFSITNSL 326
A++L + +G+ F T SL
Sbjct: 193 AKILRGIALKGYCFRCTLSL 212
>gi|431908545|gb|ELK12140.1| Exonuclease domain-containing protein 1 [Pteropus alecto]
Length = 529
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC ++ K QEIIEFP+V++++ G++E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNEGKRHQSQEIIEFPAVLLNTSNGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENK-----GIKNTNF------AVVT 235
FC +LTGI+Q QVD GV L L + KW+ E K GI + + A VT
Sbjct: 92 FCMELTGIKQDQVDEGVPLKICLSQFCKWIHKIQQEKKITFATGISDLSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT L
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCSMKITRCL 242
>gi|338712792|ref|XP_003362770.1| PREDICTED: ERI1 exoribonuclease 2 [Equus caballus]
Length = 689
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----------KGIKNTNF------AVVT 235
FC +LTGI+Q QVD GV L L + KW++ G+ + + A VT
Sbjct: 92 FCVELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKITFASGVADLSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ GL + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYKRKPKGLSGALQEVGLEFLGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT L
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCFMKITRPL 242
>gi|387015834|gb|AFJ50036.1| ERI1 exoribonuclease 3-like [Crotalus adamanteus]
Length = 257
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
Query: 115 QFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE 174
+ A + + A F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E
Sbjct: 43 KLASHGFASMAAMSSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIE 101
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--A 232
+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ +
Sbjct: 102 STFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPTVKSI 161
Query: 233 VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLA 291
VT +WD +VML +C++ + YF +WINLK + G + L + + L
Sbjct: 162 FVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQ 221
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
GR H G+DD KN A ++ L HRGF F T+
Sbjct: 222 HIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTS 254
>gi|410985044|ref|XP_003998835.1| PREDICTED: ERI1 exoribonuclease 2 [Felis catus]
Length = 685
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 21/213 (9%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K QEIIEFP+V++S+ TG++E+ F TYV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLSTSTGEIESEFHTYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKW------------------LENKGIKNTNFAV 233
FC +LTGI+Q QVD GV L L + KW L N +K F
Sbjct: 92 FCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAF-- 149
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQ 293
VTWS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ +
Sbjct: 150 VTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFL 209
Query: 294 GRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
GR H GLDD++NTA L ++ G IT SL
Sbjct: 210 GREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|449508749|ref|XP_002190758.2| PREDICTED: ERI1 exoribonuclease 3 [Taeniopygia guttata]
Length = 278
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 78 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 136
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + + VT +WD +VML
Sbjct: 137 LTPFCTELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLP 196
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C++ + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 197 GQCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKN 256
Query: 306 TARLLALLMHRGFKFSITN 324
A ++ L HRGF F T+
Sbjct: 257 IANIMKTLAHRGFIFKQTS 275
>gi|118094519|ref|XP_422418.2| PREDICTED: ERI1 exoribonuclease 3 [Gallus gallus]
Length = 265
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 65 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 123
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + + VT +WD +VML
Sbjct: 124 LTPFCTELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLP 183
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C++ + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 184 GQCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKN 243
Query: 306 TARLLALLMHRGFKFSITN 324
A ++ L HRGF F T+
Sbjct: 244 IANIMKTLAHRGFIFKQTS 262
>gi|449266425|gb|EMC77478.1| Prion protein-interacting protein [Columba livia]
Length = 274
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 74 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 132
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + + VT +WD +VML
Sbjct: 133 LTPFCTELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLP 192
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C++ + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 193 GQCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKN 252
Query: 306 TARLLALLMHRGFKFSITN 324
A ++ L HRGF F T+
Sbjct: 253 IANIMKTLAHRGFIFKQTS 271
>gi|403291855|ref|XP_003936978.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 314
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 114 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 172
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 173 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 232
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 233 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 289
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 290 CKNIANIMKTLAYRGFIFKQTS 311
>gi|441634258|ref|XP_004089825.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Nomascus leucogenys]
Length = 314
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 114 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 172
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 173 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 232
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 233 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 289
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 290 CKNIANIMKTLAYRGFIFKQTS 311
>gi|164420717|ref|NP_001106713.1| ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|166989902|sp|A6QLH5.1|ERI3_BOVIN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|151556386|gb|AAI47968.1| ERI3 protein [Bos taurus]
gi|296488926|tpg|DAA31039.1| TPA: ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|440907277|gb|ELR57437.1| ERI1 exoribonuclease 3 [Bos grunniens mutus]
Length = 337
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|410032833|ref|XP_003949440.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Pan troglodytes]
Length = 314
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 114 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 172
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 173 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 232
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 233 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 289
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 290 CKNIANIMKTLAYRGFIFKQTS 311
>gi|149693719|ref|XP_001497227.1| PREDICTED: ERI1 exoribonuclease 3 [Equus caballus]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|291399043|ref|XP_002715197.1| PREDICTED: prion protein interacting protein [Oryctolagus
cuniculus]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|397483348|ref|XP_003812865.1| PREDICTED: ERI1 exoribonuclease 3 [Pan paniscus]
Length = 314
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 114 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 172
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 173 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 232
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 233 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 289
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 290 CKNIANIMKTLAYRGFIFKQTS 311
>gi|74136559|ref|NP_076971.1| ERI1 exoribonuclease 3 [Homo sapiens]
gi|332259224|ref|XP_003278687.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Nomascus leucogenys]
gi|332808745|ref|XP_513102.3| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Pan troglodytes]
gi|426329367|ref|XP_004025712.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Gorilla gorilla
gorilla]
gi|172045564|sp|O43414.2|ERI3_HUMAN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|158254566|dbj|BAF83256.1| unnamed protein product [Homo sapiens]
gi|162319286|gb|AAI56813.1| Exoribonuclease 3 [synthetic construct]
gi|261860912|dbj|BAI46978.1| exoribonuclease 3 [synthetic construct]
gi|380816434|gb|AFE80091.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|384949372|gb|AFI38291.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|410207994|gb|JAA01216.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410250276|gb|JAA13105.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410290452|gb|JAA23826.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333785|gb|JAA35839.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333787|gb|JAA35840.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333789|gb|JAA35841.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|351696855|gb|EHA99773.1| Prion protein-interacting protein [Heterocephalus glaber]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|348552232|ref|XP_003461932.1| PREDICTED: ERI1 exoribonuclease 3-like [Cavia porcellus]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|344287723|ref|XP_003415602.1| PREDICTED: ERI1 exoribonuclease 3 [Loxodonta africana]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|390465848|ref|XP_002750780.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Callithrix jacchus]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|307776322|pdb|2XRI|A Chain A, Crystal Structure Of Human Eri1 Exoribonuclease 3
Length = 224
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 4/198 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 25 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 83
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 84 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 143
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C++ + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 144 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 203
Query: 307 ARLLALLMHRGFKFSITN 324
A ++ L +RGF F T+
Sbjct: 204 ANIMKTLAYRGFIFKQTS 221
>gi|395857747|ref|XP_003801246.1| PREDICTED: ERI1 exoribonuclease 3 [Otolemur garnettii]
Length = 337
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPIADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|351710291|gb|EHB13210.1| Exonuclease domain-containing protein 1, partial [Heterocephalus
glaber]
Length = 684
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +VIDFE+TC + K+ QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 27 QLYDYLIVIDFESTCWNDGKHHNNQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSE 86
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENK-----GIKNTNF------AVVT 235
FC +LTGI+Q Q+D GV L L + KW+ E K G+ + + A VT
Sbjct: 87 FCMELTGIKQAQIDEGVPLKICLSQFCKWIHKIQQEKKIVFTPGVSDPSTSEVKLCAFVT 146
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR
Sbjct: 147 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 206
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT L
Sbjct: 207 EHSGLDDSRNTALLAWKMIRDGCLMKITRCL 237
>gi|297278520|ref|XP_001093178.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Macaca mulatta]
Length = 335
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 135 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 193
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 194 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 253
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 254 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 310
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 311 CKNIANIMKTLAYRGFIFKQTS 332
>gi|156372383|ref|XP_001629017.1| predicted protein [Nematostella vectensis]
gi|156216008|gb|EDO36954.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 22/215 (10%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
Q F Y VVIDFE+TC +K +N P EIIEFP+V+VS+ TG++ + F+ +V PT + LS
Sbjct: 3 QPFDYLVVIDFESTCWKEKRRNSAP-EIIEFPAVVVSTSTGEIVSEFRQFVSPTEHSRLS 61
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----KGIK--------------NTNFA 232
+FC LTGI Q QVD G+ + L+ +WL+ KGI+ +A
Sbjct: 62 EFCTKLTGITQDQVDAGIPIGACLVLFSRWLKELQQLKGIRFMSDITRPNGRPIDQAKWA 121
Query: 233 V-VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLA 291
+ VTWS+WD + L++EC K+ PP WI+LK + + + L A++ G+
Sbjct: 122 MSVTWSDWDIGICLKNECLRKRHLVPPELRSWIDLKATYKKFYSRKPDGLAGALKDLGIR 181
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ GR H GLDDA+NTA L ++ G S+T+SL
Sbjct: 182 FDGREHSGLDDARNTAALAWRMVRDGCVISVTSSL 216
>gi|426215380|ref|XP_004001950.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Ovis aries]
Length = 259
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 59 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 117
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 118 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 177
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 178 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 234
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 235 CKNIANIMKTLAYRGFIFKQTS 256
>gi|431910041|gb|ELK13128.1| Prion protein-interacting protein [Pteropus alecto]
Length = 337
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 312
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 313 CKNIANIMKTLAYRGFIFKQTS 334
>gi|2852640|gb|AAC19158.1| unknown [Homo sapiens]
Length = 397
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 197 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 255
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 256 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 315
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 316 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 372
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 373 CKNIANIMKTLAYRGFIFKQTS 394
>gi|297278522|ref|XP_002801563.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Macaca mulatta]
gi|390465850|ref|XP_003733476.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Callithrix jacchus]
gi|390465852|ref|XP_003733477.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Callithrix jacchus]
gi|403291851|ref|XP_003936976.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403291853|ref|XP_003936977.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403291857|ref|XP_003936979.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426329369|ref|XP_004025713.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Gorilla gorilla
gorilla]
gi|119627449|gb|EAX07044.1| prion protein interacting protein, isoform CRA_c [Homo sapiens]
gi|194387402|dbj|BAG60065.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 59 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 117
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 118 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 177
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 178 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 234
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 235 CKNIANIMKTLAYRGFIFKQTS 256
>gi|119627448|gb|EAX07043.1| prion protein interacting protein, isoform CRA_b [Homo sapiens]
Length = 206
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 7 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 65
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 66 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 125
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C++ + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 126 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 185
Query: 307 ARLLALLMHRGFKFSITNS 325
A ++ L +RGF F T+
Sbjct: 186 ANIMKTLAYRGFIFKQTSK 204
>gi|28174986|gb|AAH21405.2| Eri3 protein [Mus musculus]
Length = 264
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 65 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 123
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 124 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 183
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 184 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 240
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 241 KNIANIMKTLAYRGFIFKQTS 261
>gi|293347578|ref|XP_001071982.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
gi|392348242|ref|XP_233435.5| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|149035532|gb|EDL90213.1| similar to prion protein interacting protein 1, isoform CRA_a
[Rattus norvegicus]
Length = 337
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 196
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 197 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 256
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 257 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 313
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 314 KNIANIMKTLAYRGFIFKQTS 334
>gi|148698603|gb|EDL30550.1| prion protein interacting protein 1, isoform CRA_a [Mus musculus]
Length = 259
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 60 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 118
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 119 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 178
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 179 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 235
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 236 KNIANIMKTLAYRGFIFKQTS 256
>gi|187469812|gb|AAI67080.1| Unknown (protein for IMAGE:8363520) [Rattus norvegicus]
Length = 292
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 93 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 151
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 152 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 211
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 212 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 268
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 269 KNIANIMKTLAYRGFIFKQTS 289
>gi|33859765|ref|NP_536717.2| ERI1 exoribonuclease 3 [Mus musculus]
gi|81913994|sp|Q8C460.1|ERI3_MOUSE RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|26350187|dbj|BAC38733.1| unnamed protein product [Mus musculus]
gi|74184336|dbj|BAE25703.1| unnamed protein product [Mus musculus]
gi|109733321|gb|AAI16686.1| Exoribonuclease 3 [Mus musculus]
Length = 337
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 196
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 197 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 256
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 257 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 313
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 314 KNIANIMKTLAYRGFIFKQTS 334
>gi|405971378|gb|EKC36217.1| Exonuclease domain-containing protein 1, partial [Crassostrea
gigas]
Length = 590
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 14/208 (6%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F Y +++D+E+TC + K QEIIEFP+V+++++TG +E+ F YV P +LSDF
Sbjct: 29 QQFSYLIILDYESTCWEQKKFQTQEIIEFPAVLLNTLTGVVESEFHYYVMPEEQPMLSDF 88
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN----KGI----------KNTNFAVVTWSN 238
CK LTGI Q QVD G+ L L + WL+ KG+ + + VTWS+
Sbjct: 89 CKQLTGITQEQVDNGIPLRLCLRKFSHWLDKLQREKGLVFDPPSEDSTEASYTTFVTWSD 148
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD L +EC+ K++ KP N WI+L+ + + + L A++ G+ ++GR H
Sbjct: 149 WDLGTCLLNECKRKQLLKPSQLNNWIDLRATYRKFYDRKPNGLNGALQDLGIEFEGREHS 208
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSL 326
G+ DA+NTA L +M G IT SL
Sbjct: 209 GIVDARNTATLAYRMMCDGCVMKITKSL 236
>gi|109730985|gb|AAI17541.1| Eri3 protein [Mus musculus]
Length = 296
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 97 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 155
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 156 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 215
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 216 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 272
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 273 KNIANIMKTLAYRGFIFKQTS 293
>gi|392340620|ref|XP_003754131.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|392348244|ref|XP_003750052.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
Length = 296
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 97 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 155
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 156 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 215
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 216 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 272
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 273 KNIANIMKTLAYRGFIFKQTS 293
>gi|321477963|gb|EFX88921.1| hypothetical protein DAPPUDRAFT_311056 [Daphnia pulex]
Length = 349
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F ++V+ID+EATC+ K+ + QEIIEFP+V+++ G++E F++Y RP N LL++FC
Sbjct: 113 FDFYVIIDYEATCELLKHSNFKQEIIEFPAVLLNCQKGEVEDEFRSYCRPVLNPLLTEFC 172
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD+ E L ++WL+ K + + +FA+VT WD L+++C
Sbjct: 173 TELTGITQDDVDKAPLFHEVLTSFEEWLQKKKLGSKYSFAIVTDGPWDIGYFLKNQCALS 232
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
KI P Y WIN++ F + + L +++ G +QGRAH GLDDA+N A ++
Sbjct: 233 KIEFPTYCKYWINIRKTFANFYNTGKMPLSTMIQLIGREFQGRAHSGLDDARNIAFIVQR 292
Query: 313 LMHRGFKFSITNSL 326
L+ G + L
Sbjct: 293 LVKDGARVVFNEKL 306
>gi|291236484|ref|XP_002738169.1| PREDICTED: CG7896-like [Saccoglossus kowalevskii]
Length = 1408
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
F Y VVID+EATC+K+ NP Y EIIEFP V+++S T ++E F+T+ RP + LSDF
Sbjct: 1086 FDYLVVIDYEATCEKE-NPTDYVHEIIEFPVVLINSKTLKMEKEFRTFCRPVLHPKLSDF 1144
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
C +LTGI Q QVD S+ L + + WL ENK +FA+VT WD L +C
Sbjct: 1145 CTELTGITQAQVDGAPLFSDVLDQFENWLEENKLGSEYSFAIVTDGPWDIICFLNVQCVL 1204
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+I P Y RWIN++ F + R L ++ G+ ++GR H G+ D +N AR++
Sbjct: 1205 SQISFPEYARRWINIRKLFSNYYHTRRLKLTLMLDHLGMTFEGRQHSGIADCRNIARIMV 1264
Query: 312 LLMHRG 317
L+ G
Sbjct: 1265 KLLEDG 1270
>gi|11138061|dbj|BAB17734.1| OSJNBa0036E02.8 [Oryza sativa Japonica Group]
Length = 161
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 78/98 (79%)
Query: 263 WINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
WINLKVPF EVFGGVRCNLKEAV+++GL W+GRAHCGLDDA+NTARLLALLMHRGFKFSI
Sbjct: 3 WINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSI 62
Query: 323 TNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDGS 360
TNSL+WQ+ S+T P P HK M++ GS
Sbjct: 63 TNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMGS 100
>gi|344238514|gb|EGV94617.1| Prion protein-interacting protein [Cricetulus griseus]
Length = 206
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 7 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 65
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 66 TPFCTELTGIIQAMVDGQPRLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 125
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C + + YF +WINLK + G + L + + L GR H G+DD KN
Sbjct: 126 QCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 185
Query: 307 ARLLALLMHRGFKFSITNS 325
A ++ L +RGF F T+
Sbjct: 186 ANIMKTLAYRGFIFKQTSK 204
>gi|157116964|ref|XP_001652909.1| exonuclease [Aedes aegypti]
gi|108876231|gb|EAT40456.1| AAEL007801-PA [Aedes aegypti]
Length = 234
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q FQY +VIDFEATC +D + + EIIEFP+V+++ GQ+E+ F+ +V P N L
Sbjct: 16 QTFQYLIVIDFEATCWPAEDAQKWKKNEIIEFPAVLLNLSNGQIESEFRQFVMPIENPRL 75
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--------------AVVT 235
SDFC LTGI+Q QV+ GV L L D+WL+ + + A T
Sbjct: 76 SDFCIQLTGIRQDQVENGVPLHTCLSLFDRWLKKNVLGDRGLILPKMAPSNPTGTVAFAT 135
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W++WD L EC KKI K YF++WI+++ + + + +A+ G+ ++GR
Sbjct: 136 WTDWDLGSCLTKECTRKKINKAGYFDQWIDVRAIYKTFYQHNPKSFADALTTLGMRFEGR 195
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DD+KN AR++A + G F IT L
Sbjct: 196 PHSGMDDSKNIARVVAKMRREGANFIITKDL 226
>gi|340368534|ref|XP_003382806.1| PREDICTED: ERI1 exoribonuclease 3-like [Amphimedon queenslandica]
Length = 209
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 135 FQYFVVIDFEATCDKD--KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Y++V+DFEATC+ +P PQEIIEFP + V++ T + E F TYVRPT + LL+ F
Sbjct: 10 LSYYLVLDFEATCNASHLPSPRPQEIIEFPVLAVNAKTLETEKIFHTYVRPTSHPLLTPF 69
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C LTGI Q QVD TL E L WLE G + F VT +WD + ML +C+
Sbjct: 70 CTQLTGITQSQVDGQPTLPEVLRSFHSWLETNGFLEPSVRFCFVTCGDWDLKTMLPGQCK 129
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P YF W+N+K F + G + +E + +GR H G+DD++N A++L
Sbjct: 130 YFDWPVPEYFRSWMNIKFVFQRLTGVKAKGMPHMLEYFKIPLEGRHHSGIDDSRNIAKIL 189
Query: 311 ALL 313
L
Sbjct: 190 TRL 192
>gi|432094495|gb|ELK26058.1| ERI1 exoribonuclease 3, partial [Myotis davidii]
Length = 333
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 133 SFPPQRYHYFLVLDFEATCDKPQI-QPQEIIEFPILKLNGRTMEIESTFHMYVQPVIHPQ 191
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD ++ML
Sbjct: 192 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKIMLP 251
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 252 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDD 308
Query: 303 AKNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 309 CKNIANIMKTLAYRGFIFKQTS 330
>gi|354470182|ref|XP_003497438.1| PREDICTED: ERI1 exoribonuclease 3-like [Cricetulus griseus]
Length = 296
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 97 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 155
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 156 TPFCTELTGIIQAMVDGQPRLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 215
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C + + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 216 QCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 272
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L +RGF F T+
Sbjct: 273 KNIANIMKTLAYRGFIFKQTS 293
>gi|345780904|ref|XP_850849.2| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Canis lupus
familiaris]
gi|410967106|ref|XP_003990063.1| PREDICTED: ERI1 exoribonuclease 3 [Felis catus]
Length = 337
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 196
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 197 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 256
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 257 QCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 313
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L ++GF F T+
Sbjct: 314 KNIANIMKTLAYQGFIFKQTS 334
>gi|73977201|ref|XP_862517.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Canis lupus
familiaris]
gi|301781887|ref|XP_002926358.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 1 [Ailuropoda
melanoleuca]
Length = 259
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 10/201 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 60 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 118
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 119 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 178
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDA 303
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+DD
Sbjct: 179 QCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDC 235
Query: 304 KNTARLLALLMHRGFKFSITN 324
KN A ++ L ++GF F T+
Sbjct: 236 KNIANIMKTLAYQGFIFKQTS 256
>gi|355779519|gb|EHH63995.1| 3'-5' exoribonuclease 1 [Macaca fascicularis]
Length = 349
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKI 322
>gi|380790199|gb|AFE66975.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|383422639|gb|AFH34533.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|384944050|gb|AFI35630.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKI 322
>gi|402877563|ref|XP_003902493.1| PREDICTED: 3'-5' exoribonuclease 1 [Papio anubis]
Length = 349
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKI 322
>gi|443698717|gb|ELT98575.1| hypothetical protein CAPTEDRAFT_130678 [Capitella teleta]
Length = 328
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 114/200 (57%), Gaps = 9/200 (4%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ + +++V+DFEATC+ D + +P EIIEFP V++ T Q+ F +YVRPT N +L+D
Sbjct: 75 PQYYDFYLVVDFEATCE-DSHTWPHEIIEFPIVVIDGKTHQVVDEFHSYVRPTINPVLTD 133
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-----NKGIKNTNFAVVTWSNWDCRVMLE 246
FC LTGI Q QVD E L + WL KG+++ A VT WD +
Sbjct: 134 FCISLTGISQDQVDSSPLFPEVLTSVESWLHRNKYCGKGVRS---AFVTDGPWDMSRFMY 190
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+C+ + P + N W+N++ + + R +L++ +E G++++GR HCGLDD +N
Sbjct: 191 LQCKHSNLAFPRWANTWVNIRKTYCNFYHFKRTSLRKMLENMGMSFEGRPHCGLDDTRNI 250
Query: 307 ARLLALLMHRGFKFSITNSL 326
AR+ ++ G ++ L
Sbjct: 251 ARIAQRMLQDGSPLNVNERL 270
>gi|344281397|ref|XP_003412466.1| PREDICTED: 3'-5' exoribonuclease 1-like [Loxodonta africana]
Length = 388
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 166 YDYICIIDFEATCEEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 225
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 226 INLTGITQDQVDRADTFPQVLKKVTDWMKLKELGTKYKYSILTDGSWDMNKFLNIQCQLS 285
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ RWIN++ + + R K + E G++++GR H GLDD+KN AR+
Sbjct: 286 RLRYPPFAKRWINIRKSYGNFYKVPRSQTKLTIMLEKLGMSYEGRPHSGLDDSKNIARIA 345
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 346 VRMLQDGCELRVNEKI 361
>gi|355697746|gb|EHH28294.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKI 322
>gi|166998659|ref|NP_001107798.1| Snipper [Tribolium castaneum]
gi|156447793|gb|ABU63675.1| Snipper [Tribolium castaneum]
Length = 232
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
PQ F Y +V+DFEATC + +P P EIIEFP V+ ++ A FQ YV P N L
Sbjct: 25 PQPFDYLLVLDFEATCWSNGDPRKNPAEIIEFPVVLYDVKNAKIIAEFQQYVMPVENPKL 84
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL--------------ENKGIKNTNFAVVT 235
SDFC +LTGIQQ QVD GV L LL +W+ E++ K FA T
Sbjct: 85 SDFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMSLYDMDFPNGESQATKTCAFA--T 142
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD L EC K I + +WI+++ F L A+ GL ++G
Sbjct: 143 WSDWDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYIRRPFIGLAGALAELGLTFEGT 202
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITN 324
HCGL DA+NTARL+ ++ +G +T
Sbjct: 203 EHCGLHDARNTARLVGKMVDKGVVLQLTR 231
>gi|297682312|ref|XP_002818868.1| PREDICTED: 3'-5' exoribonuclease 1 [Pongo abelii]
Length = 349
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|270002199|gb|EEZ98646.1| hypothetical protein TcasGA2_TC001174 [Tribolium castaneum]
Length = 232
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
PQ F Y +V+DFEATC + +P P EIIEFP V+ ++ A FQ YV P N L
Sbjct: 25 PQPFDYLLVLDFEATCWSNGDPRKNPAEIIEFPVVLYDVKNAKIIAEFQQYVMPVENPKL 84
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL--------------ENKGIKNTNFAVVT 235
SDFC +LTGIQQ QVD GV L LL +W+ E++ K FA T
Sbjct: 85 SDFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMRLYDMDFPNGESQAAKTCAFA--T 142
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD L EC K I + +WI+++ F L A+ GL ++G
Sbjct: 143 WSDWDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYIRRPFIGLSGALAELGLTFEGT 202
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITN 324
HCGL DA+NTARL+ ++ +G +T
Sbjct: 203 EHCGLHDARNTARLVGKMVDKGVVLQLTR 231
>gi|326929461|ref|XP_003210882.1| PREDICTED: ERI1 exoribonuclease 2-like [Meleagris gallopavo]
Length = 716
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 16/201 (7%)
Query: 142 DFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQ 201
DFE+TC +D EIIEFP+V++++ TG++EA F +V+P +LS+FC LTG+ Q
Sbjct: 70 DFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHAFVQPQEQPVLSEFCTALTGVTQ 129
Query: 202 IQVDRGVTLSEALLRHDKWLE---------------NKGIKNTNF-AVVTWSNWDCRVML 245
QVD GV L L + KWL+ + I T A VTW++WD V L
Sbjct: 130 KQVDEGVPLHICLSQFLKWLQKIQKEKKFLFISETPSNAIPETKLCAFVTWTDWDLGVCL 189
Query: 246 ESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
EC+ K++ KP FN WI+LK + + L A++ GLA+ GR H GLDD++N
Sbjct: 190 HYECKRKQLRKPDIFNSWIDLKATYRAFYNRKPKGLSGALQDLGLAFVGREHSGLDDSRN 249
Query: 306 TARLLALLMHRGFKFSITNSL 326
TARL L+ G IT SL
Sbjct: 250 TARLAWRLICDGCVLKITKSL 270
>gi|427778455|gb|JAA54679.1| Putative exonuclease [Rhipicephalus pulchellus]
Length = 283
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 113/217 (52%), Gaps = 28/217 (12%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + YF+++DFEATC +K P PQEIIEFP + V+ T + E+ F TYV+P + L+
Sbjct: 67 QAYDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQAHPQLTA 126
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAV---------------- 233
FC +LTGI Q VD L E L R D W+ +G+ T F
Sbjct: 127 FCTELTGIVQDMVDDQPHLQEVLSRFDDWMREQGLLQARTVFITFGDWDLQKMLPSQCAY 186
Query: 234 ---------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA 284
+T+ +WD + ML S+C + I PPY RWINLK F E G L +A
Sbjct: 187 LGXXARTVFITFGDWDLQKMLPSQCAYLGIPVPPYMTRWINLKRAFAECTGHWPKTLLDA 246
Query: 285 VEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFS 321
+ L GR H G+DD +N +L+A L RG++F+
Sbjct: 247 LRFCRLPHLGRHHSGIDDCRNLTQLVAWLASRGYQFA 283
>gi|410956121|ref|XP_003984693.1| PREDICTED: 3'-5' exoribonuclease 1 [Felis catus]
Length = 349
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W+++K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKSKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|332244613|ref|XP_003271468.1| PREDICTED: 3'-5' exoribonuclease 1 [Nomascus leucogenys]
Length = 349
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRLHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|158255560|dbj|BAF83751.1| unnamed protein product [Homo sapiens]
gi|261858590|dbj|BAI45817.1| exoribonuclease 1 [synthetic construct]
Length = 349
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 121 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 180
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + W++ K + ++++T +WD L
Sbjct: 181 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLN 240
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+K
Sbjct: 241 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSK 300
Query: 305 NTARLLALLMHRGFKFSITNSL 326
N AR+ ++ G + I +
Sbjct: 301 NIARIAVRMLQDGCELRINEKM 322
>gi|31543184|ref|NP_699163.2| 3'-5' exoribonuclease 1 [Homo sapiens]
gi|45476938|sp|Q8IV48.3|ERI1_HUMAN RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-end-specific exoribonuclease;
AltName: Full=Histone mRNA 3'-exonuclease 1; AltName:
Full=Protein 3'hExo; Short=HEXO
gi|23271401|gb|AAH35279.1| Exoribonuclease 1 [Homo sapiens]
gi|33520761|gb|AAQ21219.1| 3' exoribonuclease [Homo sapiens]
gi|119585973|gb|EAW65569.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|119585974|gb|EAW65570.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|123979876|gb|ABM81767.1| three prime histone mRNA exonuclease 1 [synthetic construct]
gi|123994641|gb|ABM84922.1| three prime histone mRNA exonuclease 1 [synthetic construct]
Length = 349
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 121 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 180
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + W++ K + ++++T +WD L
Sbjct: 181 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLN 240
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+K
Sbjct: 241 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSK 300
Query: 305 NTARLLALLMHRGFKFSITNSL 326
N AR+ ++ G + I +
Sbjct: 301 NIARIAVRMLQDGCELRINEKM 322
>gi|343958098|dbj|BAK62904.1| histone mRNA 3'-exonuclease 1 [Pan troglodytes]
Length = 271
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 49 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 108
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + +W++ K + ++++T +WD L +C+
Sbjct: 109 ISLTGITQDQVDRADTFPQVLKKVIEWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 168
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 169 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 228
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 229 VRMLQDGCELRINEKM 244
>gi|397467350|ref|XP_003805385.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan paniscus]
Length = 345
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 123 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 182
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 183 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 242
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 243 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 302
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 303 VRMLQDGCELRINEKM 318
>gi|426358763|ref|XP_004046664.1| PREDICTED: 3'-5' exoribonuclease 1 [Gorilla gorilla gorilla]
Length = 349
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|119585972|gb|EAW65568.1| three prime histone mRNA exonuclease 1, isoform CRA_a [Homo
sapiens]
Length = 288
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 60 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 119
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + W++ K + ++++T +WD L
Sbjct: 120 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLN 179
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+K
Sbjct: 180 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSK 239
Query: 305 NTARLLALLMHRGFKFSITNSL 326
N AR+ ++ G + I +
Sbjct: 240 NIARIAVRMLQDGCELRINEKM 261
>gi|114623463|ref|XP_001136735.1| PREDICTED: 3'-5' exoribonuclease 1 isoform 1 [Pan troglodytes]
gi|410057587|ref|XP_003954240.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan troglodytes]
gi|410216504|gb|JAA05471.1| exoribonuclease 1 [Pan troglodytes]
gi|410253534|gb|JAA14734.1| exoribonuclease 1 [Pan troglodytes]
gi|410287450|gb|JAA22325.1| exoribonuclease 1 [Pan troglodytes]
gi|410333459|gb|JAA35676.1| exoribonuclease 1 [Pan troglodytes]
Length = 349
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|296221910|ref|XP_002756956.1| PREDICTED: 3'-5' exoribonuclease 1 [Callithrix jacchus]
Length = 348
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 126 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTRLSDFC 185
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T L + W++ K + ++++T +WD L +C+
Sbjct: 186 ISLTGITQDQVDRADTFPHVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQIS 245
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K A+ E G+ + GR HCGLDD+KN AR+
Sbjct: 246 RIKYPSFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMDYDGRPHCGLDDSKNIARIA 305
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 306 VRMLQDGCELRINEKM 321
>gi|426254403|ref|XP_004020868.1| PREDICTED: ERI1 exoribonuclease 2 [Ovis aries]
Length = 689
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC + K+ QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIIIDFESTCWNDGKHHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRH---------------DKWLENKGIKNTNF-AVVT 235
FC +LTGI+Q QVD GV L L + + + A VT
Sbjct: 92 FCMELTGIRQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTISDISTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFSGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHFGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|345802232|ref|XP_851106.2| PREDICTED: ERI1 exoribonuclease 2 [Canis lupus familiaris]
Length = 679
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 21/213 (9%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKW------------------LENKGIKNTNFAV 233
FC +LTGI+Q QVD GV L L + KW L N +K F
Sbjct: 92 FCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAF-- 149
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQ 293
VTWS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ +
Sbjct: 150 VTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFL 209
Query: 294 GRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
G+ H GLDD++NTA L ++ G IT SL
Sbjct: 210 GQEHSGLDDSRNTAMLAWKMIRDGCLMKITRSL 242
>gi|256080351|ref|XP_002576445.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645551|emb|CCD59791.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 232
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 116/196 (59%), Gaps = 14/196 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++F ++DFE+TC +D P EIIEFP VI+ SVTG L FQ++V+PT N LS FC
Sbjct: 29 LRWFFILDFESTCFEDDIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENPELSVFCS 88
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI----KNTNFAVVTWSNWDCRVMLE 246
+LTGIQQ V+ TL+ L + + WL EN G + T+ VTW++WD L
Sbjct: 89 NLTGIQQCDVENAPTLAVVLRKFEHWLRKAKENLGCSFKGQPTSAIFVTWTDWDISTCLW 148
Query: 247 SECRFKKIWKPPYFNRWINLKVPF------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
ECR KK+ P I+LK F H++ R LK+A+ + GL ++GR H G+
Sbjct: 149 DECRRKKLPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDALNLIGLHFEGRPHRGI 208
Query: 301 DDAKNTARLLALLMHR 316
DDA+NT+RLL L+ +
Sbjct: 209 DDARNTSRLLLHLLSK 224
>gi|194771098|ref|XP_001967613.1| GF13954 [Drosophila ananassae]
gi|190622727|gb|EDV38251.1| GF13954 [Drosophila ananassae]
Length = 282
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 20/219 (9%)
Query: 125 AHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTY 180
+ P QP + Y + +DFEATC + + P PQ EIIE P+V+V+ TG++EA F Y
Sbjct: 55 SKPLAMQP--YTYVIAVDFEATCWEKQAP-PQWREAEIIECPAVLVNLKTGKIEAEFHKY 111
Query: 181 VRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIK 227
+ P + LS +C +LTG QQ D V L AL+ +WL NK
Sbjct: 112 IMPIESPRLSTYCTELTGFQQKTGDGEVPLQTALMMFHEWLRKELRARNLTLPKMNKSDV 171
Query: 228 NTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEM 287
N A VTW++WD + L EC K++ K YFN+WI+++ + CN +A+
Sbjct: 172 LGNCAFVTWTDWDFGICLAKECTRKRMRKASYFNQWIDVRAINRSWYKYRPCNFSDALSH 231
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
GLA++GRAH G+DDAKN L+ ++ G FSIT L
Sbjct: 232 VGLAFEGRAHWGIDDAKNLGALMCKMVIDGALFSITKDL 270
>gi|355686523|gb|AER98084.1| exoribonuclease 1 [Mustela putorius furo]
Length = 348
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|432117301|gb|ELK37688.1| 3'-5' exoribonuclease 1 [Myotis davidii]
Length = 349
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTGTLEIEDTFQQYVRPEVNTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRGQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|73979366|ref|XP_539997.2| PREDICTED: 3'-5' exoribonuclease 1 [Canis lupus familiaris]
Length = 349
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|431902290|gb|ELK08791.1| 3'-5' exoribonuclease 1 [Pteropus alecto]
Length = 349
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTNTLEIEDTFQQYVRPEVNTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +C+
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMGYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|301787585|ref|XP_002929208.1| PREDICTED: 3'-5' exoribonuclease 1-like [Ailuropoda melanoleuca]
Length = 349
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKQVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|432943748|ref|XP_004083266.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oryzias latipes]
Length = 342
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y V+DFEATC++D NP + EIIEFP V++++ T Q+ FQ+YV+P N LSDF
Sbjct: 120 YDYICVVDFEATCEED-NPSDFLHEIIEFPLVLINTHTLQIVDTFQSYVKPELNPKLSDF 178
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN-FAVVTWSNWDCRVMLESECRF 251
C LTGI Q VD + L R KWL+ + + + +A++T +WD L +CR
Sbjct: 179 CVTLTGITQEMVDEADPFPQVLQRVVKWLQERDLGTKHKYAILTDGSWDMSKFLNIQCRV 238
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+I P + +WIN++ + + R L +E G+ ++GR HCGLDD++N AR+
Sbjct: 239 SRIRYPQFAKKWINIRKSYGNFYKLPRSQTKLSTMLEKLGMKYEGRPHCGLDDSRNIARI 298
Query: 310 LALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 299 AVRMLQDGCQLRVNERM 315
>gi|308452945|ref|XP_003089242.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
gi|308241498|gb|EFO85450.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
Length = 264
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 115/197 (58%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q+F+Y +++DFEATC ++ K P QEIIEFP V +S+ + F YVRPT + L
Sbjct: 45 QQFEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTESSKL 104
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LTGI Q VD TLS+ L +KWL E+ ++N NFA VT +WD +V L +E
Sbjct: 105 TSFCTSLTGIIQEMVDEKPTLSDVLEEFNKWLKEDSRLENNNFAFVTCGDWDLKVALPNE 164
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P YF++WIN+K + E + + +++ L QGR H G+DD N
Sbjct: 165 AKFKNIPIPDYFHQWINVKKAYAEHTNDFARGMMQLLKIYKLQHQGRHHSGIDDVANICE 224
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT++
Sbjct: 225 VVRCLGKDGHNYRITSN 241
>gi|329663381|ref|NP_001192506.1| ERI1 exoribonuclease 2 [Bos taurus]
gi|296473339|tpg|DAA15454.1| TPA: ERI1 exoribonuclease family member 2 [Bos taurus]
Length = 689
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC + K QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLFDYLIIIDFESTCWNDGKRHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRH---------------DKWLENKGIKNTNF-AVVT 235
FC +LTGI+Q QVD GV L L + + + A VT
Sbjct: 92 FCVELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGR 211
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 212 EHFGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|403307233|ref|XP_003944109.1| PREDICTED: uncharacterized protein LOC101050958 [Saimiri
boliviensis boliviensis]
Length = 745
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 523 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTRLSDFC 582
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 583 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQIS 642
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K A+ E G+ + GR HCGLDD+KN AR+
Sbjct: 643 RIKYPSFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMDYDGRPHCGLDDSKNIARIA 702
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 703 VRMLQDGCELRINEKM 718
>gi|440906215|gb|ELR56504.1| ERI1 exoribonuclease 2, partial [Bos grunniens mutus]
Length = 682
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 17/211 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y ++IDFE+TC + K QEIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 25 QLFDYLIIIDFESTCWNDGKRHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSE 84
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRH---------------DKWLENKGIKNTNF-AVVT 235
FC +LTGI+Q QVD GV L L + + + A VT
Sbjct: 85 FCVELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVT 144
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WS+WD V LE EC+ K++ KP + N WI+L+V + + L A++ G+ + GR
Sbjct: 145 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGR 204
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H GLDD++NTA L ++ G IT SL
Sbjct: 205 EHFGLDDSRNTALLAWKMIRDGCLMKITRSL 235
>gi|156405487|ref|XP_001640763.1| predicted protein [Nematostella vectensis]
gi|156227899|gb|EDO48700.1| predicted protein [Nematostella vectensis]
Length = 277
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 137 YFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y+ VIDFEATC+K+ NP Y EIIEFP+V+V++ T ++E FQ Y +P L+ FC+
Sbjct: 87 YYCVIDFEATCEKE-NPEGYQHEIIEFPAVLVNAKTLEIEGEFQQYCKPLLKPRLTKFCQ 145
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN-FAVVTWSNWDCRVMLESECRFKK 253
+LTGI Q VD+ + L WL+ +GI T+ FAVVT WD + L ++C
Sbjct: 146 ELTGISQETVDKSDNFPQVLDNFHIWLKERGIGTTHKFAVVTDGPWDIQRFLVTQCEICN 205
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
I P + ++INL+ + F ++C L E +E GL ++GR H GLDD++N AR+L +
Sbjct: 206 INLPKWSRKYINLRKHYRN-FYKMKCKLSEMLENLGLEFEGRPHSGLDDSRNIARILIKM 264
Query: 314 MHRGFKFSITN 324
+ G S +
Sbjct: 265 LKDGGDLSFND 275
>gi|330800009|ref|XP_003288032.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
gi|325081920|gb|EGC35419.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
Length = 231
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
P + + Q F+Y +V+DFEATC+KD+ QEIIEFPSVIV++ T ++ + F+ Y +P
Sbjct: 19 PTSSVEPKKQLFKYLIVLDFEATCEKDQKFPNQEIIEFPSVIVNTETLEIVSTFREYCKP 78
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--------NKGIKNTNFAVVT 235
L+ FC +LTGI+Q VD L RH +WLE N I N VT
Sbjct: 79 LIVPKLTAFCTELTGIKQETVDNADLFPNVLKRHYQWLEESLPGVIVNGQIINDQICFVT 138
Query: 236 WSNWDCRVMLESECRF-KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
+WD R L+ + + I P YF +WIN+K+ F + + + + L +G
Sbjct: 139 CGDWDLRQCLQKQLKLCNNIPTPNYFKKWINIKLQFTDFYSKPSYGMTNMLRELNLELEG 198
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
R HCGL D+ N AR++ ++ G F+I + L
Sbjct: 199 RHHCGLSDSLNIARIVKKMLAAGCIFNIISKL 230
>gi|56758854|gb|AAW27567.1| SJCHGC03520 protein [Schistosoma japonicum]
Length = 201
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 2/196 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F YF+V+DFEATC+KD EIIEFP ++V++ T E+ F YVRPT N +LSDF
Sbjct: 5 QKFAYFMVLDFEATCEKDIKIPDPEIIEFPVLMVNAYTLHTESIFHHYVRPTINPVLSDF 64
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--NFAVVTWSNWDCRVMLESECR 250
C +LTGI Q ++ L L D +L+ +K FA VT +WD ++ML +C+
Sbjct: 65 CTELTGIIQSMIEDEPELPSILKMFDLFLDKNNLKICPYKFAFVTCGDWDLKIMLPQQCK 124
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F +WINLK + +V G ++ + + GR H G+DD +N A +L
Sbjct: 125 LLGIDVPDCFKQWINLKQVYCDVMGQFPFSMMSMLAGLNIKHTGRHHSGIDDCRNIANIL 184
Query: 311 ALLMHRGFKFSITNSL 326
L+ G IT ++
Sbjct: 185 CELIRCGATPDITGNI 200
>gi|335307056|ref|XP_003360688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Sus scrofa]
Length = 525
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 303 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 362
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +CR
Sbjct: 363 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCRLS 422
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 423 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 482
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 483 VRMLQDGCELRVNEKM 498
>gi|281345321|gb|EFB20905.1| hypothetical protein PANDA_019321 [Ailuropoda melanoleuca]
Length = 311
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 89 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 148
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 149 INLTGITQDQVDRADTFPQVLKQVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 208
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 209 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 268
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 269 VRMLQDGCELRINEKM 284
>gi|395730614|ref|XP_003780607.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 3 [Pongo
abelii]
Length = 316
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ YV+P +
Sbjct: 114 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTXHMYVQPVVHPQ 172
Query: 189 LSDFCKDLTGIQQ--IQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVM 244
L+ FC +LTGI Q +++D +L + L R D+W+ +G+ + N VT +WD +VM
Sbjct: 173 LTPFCTELTGIIQAMVEMDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVM 232
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGL 300
L +C++ + YF +WINLK + G C K ++M GL+ Q GR H G+
Sbjct: 233 LPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGI 289
Query: 301 DDAKNTARLLALLMHRGFKFSITN 324
DD KN A ++ L +RGF F T+
Sbjct: 290 DDCKNIANIMKTLAYRGFIFKQTS 313
>gi|308492914|ref|XP_003108647.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
gi|308248387|gb|EFO92339.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
Length = 280
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q+F+Y +++DFEATC ++ K P QEIIEFP V +S+ + F YVRPT + L
Sbjct: 61 QQFEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTESPKL 120
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LTGI Q VD TLS L DKWL E+ ++N NFA VT +WD +V L +E
Sbjct: 121 TSFCTSLTGIIQEMVDEKPTLSGVLEEFDKWLKEDSRLENNNFAFVTCGDWDLKVALPNE 180
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P YF++WIN+K + E + + +++ L QGR H G+DD N
Sbjct: 181 AKFKNIPIPDYFHQWINVKKAYAEHTNDFARGMMQLLKIYKLQHQGRHHSGIDDVANICE 240
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT++
Sbjct: 241 VVRCLGKDGHNYRITSN 257
>gi|417399372|gb|JAA46706.1| Putative 3'-5' exoribonuclease 1 [Desmodus rotundus]
Length = 349
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEMNAQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +C+
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLHIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
K+ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 KLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>gi|66472468|ref|NP_001018476.1| ERI1 exoribonuclease 2 [Danio rerio]
gi|82228769|sp|Q502M8.1|ERI2_DANRE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|63100865|gb|AAH95637.1| Zgc:111991 [Danio rerio]
Length = 555
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 114/207 (55%), Gaps = 15/207 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + ++IDFE+TC ++K+ QEIIEFP+V++S +G +E+ F +YV+P +LS F
Sbjct: 30 QRFSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAF 89
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI-----------KNTNFAVVTWS 237
C +LTGI Q QVD L L R +WL E +G+ A VTWS
Sbjct: 90 CTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWS 149
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
+WD V L EC+ K++ P WI+L+ + + L+ A+ G+ + GR H
Sbjct: 150 DWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREH 209
Query: 298 CGLDDAKNTARLLALLMHRGFKFSITN 324
GL DA+NTA L +M G + SIT+
Sbjct: 210 SGLVDARNTALLAQRMMTDGCQLSITS 236
>gi|407425460|gb|EKF39438.1| hypothetical protein MOQ_000337 [Trypanosoma cruzi marinkellei]
Length = 541
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 114/225 (50%), Gaps = 20/225 (8%)
Query: 119 YNMLTPAHPYDFQPQE------FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ 172
+ M P P + Q E F +VV+DFEATC++++ EIIEFP V++ + +
Sbjct: 46 HTMPPPRKPQERQENELPPSPSFDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHH 105
Query: 173 LEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--- 229
+ FQ YVRP N +LSDFC +LTGI Q VD T ++L G
Sbjct: 106 ILTEFQRYVRPVVNPILSDFCTELTGITQSVVDTAKTFPLVFDAALEFLRGSGYGEAPPL 165
Query: 230 -NFAVVTWSNWDCRVMLESECRF-----KKIWKPPYFNRWINLKVPFHEV----FGGVRC 279
++ VT +WD + ML S+ R I PP F RW NLKVP + GGV
Sbjct: 166 RSYLFVTCGDWDLKTMLPSQLRTTAKTGTAIVAPPTFRRWCNLKVPMRAIAPTKAGGV-F 224
Query: 280 NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
+LKE + GL +GR H G+DD +N A ++ L+ RG + T
Sbjct: 225 DLKEMLAAVGLPLKGRHHSGIDDCRNIASIVQELLRRGHVIAPTT 269
>gi|291409160|ref|XP_002720873.1| PREDICTED: histone mRNA 3 end-specific exonuclease-like
[Oryctolagus cuniculus]
Length = 344
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 122 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEANTQLSDFC 181
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + + ++T +WD L +C+
Sbjct: 182 INLTGITQDQVDKADTFPQVLRKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQLS 241
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 301
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 302 VRMLQDGCELRINEKM 317
>gi|426256336|ref|XP_004021796.1| PREDICTED: LOW QUALITY PROTEIN: 3'-5' exoribonuclease 1 [Ovis
aries]
Length = 337
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 115 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 174
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 175 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 234
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 235 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 294
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 295 VRMLQDGCELRVNEKM 310
>gi|440896880|gb|ELR48688.1| 3'-5' exoribonuclease 1 [Bos grunniens mutus]
Length = 349
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>gi|84000359|ref|NP_001033281.1| 3'-5' exoribonuclease 1 [Bos taurus]
gi|81673840|gb|AAI09682.1| Three prime histone mRNA exonuclease 1 [Bos taurus]
gi|296472395|tpg|DAA14510.1| TPA: three prime histone mRNA exonuclease 1 [Bos taurus]
Length = 349
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>gi|289739411|gb|ADD18453.1| 3' histone exonuclease 1 [Glossina morsitans morsitans]
Length = 226
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q + Y + +DFEATC +++ P EIIEFP+V+V+ TG++EA F Y+ P + L
Sbjct: 41 QTYDYVICVDFEATCWENQAPPRWRESEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPKL 100
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVTW 236
S FC LTGI Q VD G+ L AL+ +WL K K N A V+W
Sbjct: 101 SAFCTKLTGIAQKTVDNGIPLQTALMMFQEWLRKELRARHLSLPKMTKDNKLGNCAFVSW 160
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
++WD + L EC K++ KPPYFN+WI+L+ + + + N +A+ GL++QGR
Sbjct: 161 TDWDFGICLHKECSRKRLKKPPYFNQWIDLRAIYKKWYKYQPLNFADALRHVGLSFQGRE 220
Query: 297 HCGLDD 302
H G+DD
Sbjct: 221 HSGIDD 226
>gi|387015830|gb|AFJ50034.1| 3'-5' exoribonuclease 1-like [Crotalus adamanteus]
Length = 338
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ P + EIIEFP V++++ T Q+E FQ YV+P N LSDFC
Sbjct: 117 YNYICVIDFEATCEEKNQPEFIHEIIEFPIVLLNTQTLQIEDTFQQYVKPEINPQLSDFC 176
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q V++ + L R W++ K + + +++++T +WD L +CR
Sbjct: 177 INLTGISQELVEKADEFPKVLQRVVDWMKQKELGSKYSYSILTDGSWDMSKFLNIQCRIS 236
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRC--NLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + RC L +E G+ + GR H GLDD+KN AR+
Sbjct: 237 RLKYPSFAKKWINIRKSYGNFYKVPRCQTKLSTMLEKLGMDYDGRPHSGLDDSKNIARIA 296
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + L
Sbjct: 297 IRMLQDGCELRVNERL 312
>gi|152941094|gb|ABS44984.1| histone mRNA 3' end-specific exonuclease [Bos taurus]
Length = 349
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>gi|345322776|ref|XP_001508919.2| PREDICTED: 3'-5' exoribonuclease 1-like [Ornithorhynchus anatinus]
Length = 387
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 165 YDYICVIDFEATCEEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 224
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VDR T + L + +W+ K + ++++T +WD L +CR
Sbjct: 225 INLTGITQDVVDRADTFPQVLQKVVEWMRQKELGTKYKYSILTDGSWDMSKFLTIQCRIS 284
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + +WIN++ + + R K A+ E G+++ GR H GLDD+KN AR+
Sbjct: 285 HLKYPAFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMSYAGRPHSGLDDSKNIARIA 344
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 345 VRMLQDGCQLRVNEKM 360
>gi|444302267|pdb|4HXH|B Chain B, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
gi|444302270|pdb|4HXH|E Chain E, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
Length = 303
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 67 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 126
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + W + K + ++++T +WD L
Sbjct: 127 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDWXKLKELGTKYKYSLLTDGSWDXSKFLN 186
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G + GR HCGLDD+K
Sbjct: 187 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSK 246
Query: 305 NTARLLALLMHRGFKFSI 322
N AR+ + G + I
Sbjct: 247 NIARIAVRXLQDGCELRI 264
>gi|354471547|ref|XP_003498003.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cricetulus griseus]
Length = 319
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ T ++E FQ YVRP N LSDF
Sbjct: 97 YDYICIIDFEATCE-EGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDF 155
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +C+
Sbjct: 156 CVSLTGITQDQVDRADAFPQVLRKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQL 215
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 216 SRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 275
Query: 310 LALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 276 AVRMLQDGCELRINEKI 292
>gi|344240333|gb|EGV96436.1| 3'-5' exoribonuclease 1 [Cricetulus griseus]
Length = 279
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 111/197 (56%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ T ++E FQ YVRP N LSDF
Sbjct: 57 YDYICIIDFEATCE-EGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDF 115
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +C+
Sbjct: 116 CVSLTGITQDQVDRADAFPQVLRKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQL 175
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 176 SRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 235
Query: 310 LALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 236 AVRMLQDGCELRINEKI 252
>gi|198477158|ref|XP_002136734.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
gi|198145039|gb|EDY71751.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+++V+ TG +EA F YV P LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD + L EC K I KP FN+WI+ K + + + + A+E L +QGRA
Sbjct: 122 TNWDFGICLAKECARKNIRKPTCFNQWIDAKAIYQKWYKYRPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ + G FSIT L
Sbjct: 182 HSGIDDAKNLGSLICKMFRDGAPFSITKDL 211
>gi|281337568|gb|EFB13152.1| hypothetical protein PANDA_015995 [Ailuropoda melanoleuca]
Length = 365
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 32/226 (14%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 196
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 197 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 256
Query: 248 ECRFKKIWKPPYFNRWINL-KVPFHEVFGGVRCNLKEAVEMA------------------ 288
+C++ + YF +WINL KV V G +L+E
Sbjct: 257 QCQYLGLPVADYFKQWINLKKVLKRGVPSGRTASLEEQAGKGESKSHCKKSSFAMGCWPK 316
Query: 289 --------GLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
GL+ Q GR H G+DD KN A ++ L ++GF F T+
Sbjct: 317 NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYQGFIFKQTS 362
>gi|321468566|gb|EFX79550.1| hypothetical protein DAPPUDRAFT_4269 [Daphnia pulex]
Length = 199
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 135 FQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F YFV+IDFE TC KNP QEIIEFP+++++ G +E F ++ +P N L++FC
Sbjct: 2 FDYFVIIDFEGTCGFLKNPCGIQEIIEFPAILLNGHNGSIEDEFHSFCQPVLNPSLTNFC 61
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--NFAVVTWSNWDCRVMLESECRF 251
K LTGI Q VD+ + + ++WL+ + + +FAVVT D R L+ +CR
Sbjct: 62 KKLTGITQDAVDKAPLFKDVFVSFEEWLKKNKVIGSYYSFAVVTDDPNDIRQFLQKQCRI 121
Query: 252 KKIWKPPYFNRWINLKVPFHEVF--GGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+I P Y WIN+K+ F + G ++C +LK + G +QGRAH G+DDA+N A
Sbjct: 122 SEIDFPTYCQNWINIKIIFAHFYKNGNMQCLSLKNMIRDIGCEFQGRAHSGIDDARNIAS 181
Query: 309 LLALLM 314
++ L+
Sbjct: 182 IVQRLL 187
>gi|355745231|gb|EHH49856.1| hypothetical protein EGM_00583 [Macaca fascicularis]
Length = 365
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 32/227 (14%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHE-VFGGVRC-NLKEA-------------------- 284
+C++ + YF +WINLK G C KEA
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFAMGCWP 315
Query: 285 ----VEM-AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
++M GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 316 KNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 362
>gi|355557931|gb|EHH14711.1| hypothetical protein EGK_00679 [Macaca mulatta]
Length = 365
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 32/227 (14%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 137 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 195
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 196 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 255
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHE-VFGGVRC-NLKEA-------------------- 284
+C++ + YF +WINLK G C KEA
Sbjct: 256 GQCQYLGLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFAMGCWP 315
Query: 285 ----VEM-AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
++M GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 316 KNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 362
>gi|198477156|ref|XP_002136733.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
gi|198145038|gb|EDY71750.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 113/210 (53%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+++V+ TG +EA F YV P LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD + L EC K I KP FN+WI+ K + + + + A+E L +QGRA
Sbjct: 122 TNWDFGICLAKECARKNIRKPTCFNQWIDAKSIYQKWYKYRPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ + G FSIT L
Sbjct: 182 HSGIDDAKNLGSLICKMFRDGAPFSITKDL 211
>gi|55670498|pdb|1W0H|A Chain A, Crystallographic Structure Of The Nuclease Domain Of
3'hexo, A Deddh Family Member, Bound To Ramp
Length = 204
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 9 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 68
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W + K + ++++T +WD L +C+
Sbjct: 69 ISLTGITQDQVDRADTFPQVLKKVIDWXKLKELGTKYKYSLLTDGSWDXSKFLNIQCQLS 128
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G + GR HCGLDD+KN AR+
Sbjct: 129 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSKNIARIA 188
Query: 311 ALLMHRGFKFSI 322
+ G + I
Sbjct: 189 VRXLQDGCELRI 200
>gi|147900544|ref|NP_001089554.1| exoribonuclease 1 [Xenopus laevis]
gi|67678439|gb|AAH97876.1| Thex1 protein [Xenopus laevis]
Length = 348
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC+ + YP EIIEFP V++++ T ++E FQ YVRP N LS+FC
Sbjct: 126 YDYICVIDFEATCEAGNSLDYPHEIIEFPIVLLNTHTLEIEDVFQCYVRPEINPQLSEFC 185
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD+ T L +W+ K + + +A++T +WD L +CR
Sbjct: 186 VNLTGITQDTVDKSDTFPNVLRSVVEWMREKELGSKYKYAILTDGSWDMSKFLNMQCRIS 245
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R L +E G+ + GR H GLDD+KN AR+
Sbjct: 246 RLKYPRFAKKWINIRKSYGNFYKVPRTQTKLTTMLEKLGMTYNGRLHSGLDDSKNIARIA 305
Query: 311 ALLMHRGFKFSITNSL 326
A ++ G + + +
Sbjct: 306 AHMLQDGCELRVNERM 321
>gi|395850252|ref|XP_003797709.1| PREDICTED: 3'-5' exoribonuclease 1 [Otolemur garnettii]
Length = 349
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + + ++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLHIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLH 352
++ G + + N M S++ + P LPP H
Sbjct: 307 VRMLQDGCELRV-NEKMHAGQLMSVS-SSLPIEGTLPPQMPH 346
>gi|348521266|ref|XP_003448147.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oreochromis niloticus]
Length = 341
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y V+DFEATC++D NP + EIIEFP V++++ T ++ FQ YV+P N LSDF
Sbjct: 119 YDYICVVDFEATCEED-NPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKPELNPQLSDF 177
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q VD L R WL+ + + +A++T +WD L +CR
Sbjct: 178 CVKLTGITQKMVDEADPFPVVLQRVVSWLQERELGTKYKYAILTDGSWDMSKFLNIQCRV 237
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+I PP+ +WIN++ + + R L +E GL ++GR H GLDD++N AR+
Sbjct: 238 SRIKYPPFAKKWINIRKSYGNFYKVPRTQTKLSTMLEKLGLTYEGRPHSGLDDSRNIARI 297
Query: 310 LALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 298 AVRMLQDGCQLRVNERM 314
>gi|194226477|ref|XP_001915858.1| PREDICTED: 3'-5' exoribonuclease 1 [Equus caballus]
Length = 349
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD T + L + W++ K + ++++T +WD L +CR
Sbjct: 187 INLTGITQDLVDGADTFPQVLRKVVDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCRLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>gi|116666689|pdb|1ZBH|A Chain A, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666690|pdb|1ZBH|B Chain B, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666691|pdb|1ZBH|C Chain C, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666692|pdb|1ZBH|D Chain D, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
Length = 299
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 4/202 (1%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 71 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 130
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + ++ K + ++++T +WD L
Sbjct: 131 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDLMKLKELGTKYKYSLLTDGSWDMSKFLN 190
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G+ + GR +CGLDD+K
Sbjct: 191 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPNCGLDDSK 250
Query: 305 NTARLLALLMHRGFKFSITNSL 326
N AR+ ++ G + I +
Sbjct: 251 NIARIAVRMLQDGCELRINEKM 272
>gi|126330776|ref|XP_001373310.1| PREDICTED: 3'-5' exoribonuclease 1-like [Monodelphis domestica]
Length = 432
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 210 YDYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 269
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q VDR T + L +W++ K + T ++++T +WD L +C+
Sbjct: 270 ISLTGITQDMVDRAATFPQVLRNVVEWMKLKELGTTYKYSILTDGSWDMSKFLNIQCQIS 329
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R K + E G+++ GR H GLDD+KN AR+
Sbjct: 330 RLRYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEKLGMSYDGRPHSGLDDSKNIARIA 389
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 390 VRMLRDGCELRVNEKM 405
>gi|307169180|gb|EFN61996.1| Prion protein-interacting protein [Camponotus floridanus]
Length = 236
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F+Y +V+DFEATCDK PQEIIE P V +S+ +L+ F Y+RP L+ F
Sbjct: 22 QKFEYLLVMDFEATCDKQVTLQPQEIIELPCVALSTSDWKLKDTFHAYIRPRVYPKLTPF 81
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD ++ + KWL G ++ + VT NWD + ML ++C
Sbjct: 82 CIELTGIMQEMVDDQPCFADVFSKFRKWLIEGGYFDRSDKSSFVTCGNWDLKTMLPNQCN 141
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F +WI LK F + G +LK+ + L+ QGR H G+DD KN ++
Sbjct: 142 LDNITLPDEFKQWIELKHTFCDSTGYYPRSLKDMLTRLDLSMQGRLHSGIDDVKNMVSII 201
Query: 311 ALLMHR-GFKFSITNSL 326
L R +F IT+SL
Sbjct: 202 QALKERYNTQFKITSSL 218
>gi|198477154|ref|XP_002136732.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198477160|ref|XP_002136735.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
gi|198145037|gb|EDY71749.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198145040|gb|EDY71752.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC ++ P Q EIIEFP+++V+ TG +EA F YV P LS
Sbjct: 4 FTYAISVDFEATCWVNQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD + L EC K I KP FN+WI+ K + + + + A+E L +QGRA
Sbjct: 122 TNWDFGICLAKECARKNIRKPTCFNQWIDAKAIYQKWYKYRPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+DDAKN L+ + G FSIT L
Sbjct: 182 HSGIDDAKNLGSLICKMFRDGAPFSITMDL 211
>gi|47218345|emb|CAG04177.1| unnamed protein product [Tetraodon nigroviridis]
Length = 340
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y V+DFEATC+ D NP Y EIIEFP V++++ T ++ F+ YV+P N LSDF
Sbjct: 118 YDYICVVDFEATCEVD-NPSDYHHEIIEFPMVLINTHTLEIVDSFREYVKPELNPQLSDF 176
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q VD+ L R WL+ + + +A++T +WD L +C+
Sbjct: 177 CVKLTGITQKMVDKAEPFPAVLERAVAWLQERELGTKYKYAILTDGSWDMSKFLNIQCQI 236
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+I P + +WIN++ + + R L +E GL + GR HCGLDD++N AR+
Sbjct: 237 SRIRYPQFAKKWINIRKAYRNFYKVSRTQTKLSTMLEKLGLTYNGRPHCGLDDSRNIARI 296
Query: 310 LALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 297 AVRMLQDGCQLRVNERM 313
>gi|45476845|sp|Q7TMF2.2|ERI1_MOUSE RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-exonuclease 1
gi|28204890|gb|AAH46412.1| Exoribonuclease 1 [Mus musculus]
gi|74179153|dbj|BAE42771.1| unnamed protein product [Mus musculus]
gi|148703505|gb|EDL35452.1| three prime histone mRNA exonuclease 1 [Mus musculus]
Length = 345
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 6/198 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ T ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEF 181
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +CR
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRL 241
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 310 LALLMHRGFKFSITNSLM 327
++ G + I ++
Sbjct: 302 AVRMLQDGCELRINEKIL 319
>gi|256080349|ref|XP_002576444.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645552|emb|CCD59792.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 224
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
YDF Q + +FE+TC +D P EIIEFP VI+ SVTG L FQ++V+PT N
Sbjct: 15 YDFNTFA-QNSLTNNFESTCFEDDIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENP 73
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI----KNTNFAVVTWSNW 239
LS FC +LTGIQQ V+ TL+ L + + WL EN G + T+ VTW++W
Sbjct: 74 ELSVFCSNLTGIQQCDVENAPTLAVVLRKFEHWLRKAKENLGCSFKGQPTSAIFVTWTDW 133
Query: 240 DCRVMLESECRFKKIWKPPYFNRWINLKVPF------HEVFGGVRCNLKEAVEMAGLAWQ 293
D L ECR KK+ P I+LK F H++ R LK+A+ + GL ++
Sbjct: 134 DISTCLWDECRRKKLPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDALNLIGLHFE 193
Query: 294 GRAHCGLDDAKNTARLLALLMHR 316
GR H G+DDA+NT+RLL L+ +
Sbjct: 194 GRPHRGIDDARNTSRLLLHLLSK 216
>gi|195162333|ref|XP_002022010.1| GL14415 [Drosophila persimilis]
gi|194103908|gb|EDW25951.1| GL14415 [Drosophila persimilis]
Length = 223
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 113/213 (53%), Gaps = 20/213 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+++V+ TG +EA F YV P + LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD L EC K I KP FN+WI+ K + + + N +A+ L +QGRA
Sbjct: 122 TNWDFETCLAKECARKNIRKPTCFNQWIDAKAIYKKWYKYHPFNFGKALAHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
H G+DDAKN L+ + G SIT L Q
Sbjct: 182 HSGIDDAKNLGNLICKMFREGAPLSITKDLTPQ 214
>gi|407860369|gb|EKG07376.1| hypothetical protein TCSYLVIO_001498 [Trypanosoma cruzi]
Length = 550
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 132/263 (50%), Gaps = 23/263 (8%)
Query: 97 QMNSF-ESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQE---------FQYFVVIDFEAT 146
QM SF +++ ++ R A +N T P Q ++ F +VV+DFEAT
Sbjct: 19 QMASFFDTELSASIMQRRSCAAKHNRHTKPPPQKLQERQEDELPPSPFFDAYVVLDFEAT 78
Query: 147 CDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR 206
C++++ EIIEFP V++ + + ++ FQ YVRP N +LSDFC +LTGI+Q VD
Sbjct: 79 CERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCTELTGIKQSVVDA 138
Query: 207 GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDCRVMLESECRFKK-----IWKP 257
T ++L G ++ VT +WD + ML S+ R + I P
Sbjct: 139 AETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLRTTEKTGTAIVAP 198
Query: 258 PYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P F RW NLKVP + +++E + GL +GR H G+DD +N A ++ L+
Sbjct: 199 PTFRRWCNLKVPMRAIVPTKARGMFDMREMLAAVGLPLKGRHHSGIDDCRNIASVVQELL 258
Query: 315 HRGFKFS-ITNSLMWQTNDGSLT 336
RG + T+ + +GSL+
Sbjct: 259 RRGHVIAPTTDHSGIRQREGSLS 281
>gi|328877052|gb|EGG25415.1| putative RNase III [Dictyostelium fasciculatum]
Length = 297
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F+Y VV+DFEATCD QE+IEFPSVIV Q+ A F YVRP N LS F
Sbjct: 59 QPFKYIVVLDFEATCDDGTKIKNQEVIEFPSVIVDVEKQQVVAQFAEYVRPVYNPTLSAF 118
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRH------DKWLENKGIKNTN--FAVVTWSNWDCRVM 244
C LTGIQQ VD RH +K L+ G +N FAV+ +WD M
Sbjct: 119 CTQLTGIQQATVDSADIFENVFKRHFKFLVDNKLLQENGARNEENPFAVLCCGDWDLLQM 178
Query: 245 LESECRFKK--------IWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
L ++CR K + P YF WIN+K F + + + + + GR
Sbjct: 179 LPAQCRINKNESGELHYLPPPNYFTEWINVKKIFEKNYNMSAYGMANMLRQLSIPLVGRH 238
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNS 325
H G+DD +N + ++ ++ +G F IT +
Sbjct: 239 HSGIDDCRNISSIVIAMLKKGCLFEITTT 267
>gi|165905605|ref|NP_080343.4| 3'-5' exoribonuclease 1 [Mus musculus]
gi|26380424|dbj|BAB29333.2| unnamed protein product [Mus musculus]
gi|74228094|dbj|BAE38007.1| unnamed protein product [Mus musculus]
Length = 345
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 6/198 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ T ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNDQLSEF 181
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +CR
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRL 241
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 310 LALLMHRGFKFSITNSLM 327
++ G + I ++
Sbjct: 302 AIRMLQDGCELRINEKIL 319
>gi|297698262|ref|XP_002826233.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pongo abelii]
Length = 691
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 19/213 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F Y +VIDFE+TC + K+ + QEIIEFP+V++++ TGQ+E+ FQ YV+P + +LS+
Sbjct: 32 QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSE 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VT 235
FC +LTGI+Q QVD GV L L + KW+ + KN FA VT
Sbjct: 92 FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVT 151
Query: 236 WSNWDCRVMLESECRFKKIWKPP--YFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQ 293
WS+WD V LE EC+ K+++K I K + L A++ G+ +
Sbjct: 152 WSDWDLGVCLEYECKRKQLFKTSEKSLKDDIRAKSTARLFYRRKPKGLSGALQEVGIEFS 211
Query: 294 GRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
GR H GLDD++NT+ L ++ G IT SL
Sbjct: 212 GREHSGLDDSRNTSLLAWKMIRDGCVMKITRSL 244
>gi|26379605|dbj|BAB29127.2| unnamed protein product [Mus musculus]
Length = 345
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 6/198 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ T ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNDQLSEF 181
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +CR
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRL 241
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 310 LALLMHRGFKFSITNSLM 327
++ G + I ++
Sbjct: 302 AIRMLQDGCELRINEKIL 319
>gi|410918560|ref|XP_003972753.1| PREDICTED: 3'-5' exoribonuclease 1-like [Takifugu rubripes]
Length = 340
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y V+DFEATC+ D NP + EIIEFP V++++ T ++ FQ YV+P N LSDF
Sbjct: 118 YDYICVVDFEATCEVD-NPSDFHHEIIEFPMVLINTHTLEIVDSFQEYVKPELNPQLSDF 176
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q VD + L R WL+ + + +A++T +WD L +C+
Sbjct: 177 CVKLTGITQKMVDEADSFPAVLERVVAWLQERELGTKYKYAILTDGSWDMSKFLNIQCQI 236
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+I P + +WIN++ + + R L +E GL + GR HCGLDD++N AR+
Sbjct: 237 SRIRYPQFAKKWINIRKSYRNFYKVSRTQTKLSTMLEKLGLTYSGRPHCGLDDSRNIARI 296
Query: 310 LALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 297 AVRMLQDGCQLRVNERM 313
>gi|195162325|ref|XP_002022006.1| GL14410 [Drosophila persimilis]
gi|195162327|ref|XP_002022007.1| GL14411 [Drosophila persimilis]
gi|195162329|ref|XP_002022008.1| GL14412 [Drosophila persimilis]
gi|194103904|gb|EDW25947.1| GL14410 [Drosophila persimilis]
gi|194103905|gb|EDW25948.1| GL14411 [Drosophila persimilis]
gi|194103906|gb|EDW25949.1| GL14412 [Drosophila persimilis]
Length = 223
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+++V+ TG +EA F YV P + LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD + L EC K I KP FN+WI+ + + + + + A+E L +QGRA
Sbjct: 122 TNWDFGICLAKECARKNIRKPTCFNQWIDARAIYKKWYKYCPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ G+DDAKN L+ + G FSIT L
Sbjct: 182 YSGIDDAKNLGSLICKMFRDGAPFSITKDL 211
>gi|340369543|ref|XP_003383307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Amphimedon queenslandica]
Length = 301
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 8/204 (3%)
Query: 122 LTPAHPYDF------QPQEFQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLE 174
L P+ PY+ P ++ +V+DFEATC+ + + Y EIIEFP ++ T ++
Sbjct: 78 LDPSPPYELWQVLSTNPLGLKFLLVLDFEATCESVNSSDYIHEIIEFPVQLLDISTLKIV 137
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV 233
F +Y RP N+ LS FC LTGI+Q VD+ T +E +W+E + + NF++
Sbjct: 138 DTFHSYCRPCLNEKLSSFCTKLTGIEQSIVDKAPTFAEVFDDFTEWMEERELGTKHNFSL 197
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQ 293
VT WD R L +C K+ P Y ++WI+ + F + NL + G++++
Sbjct: 198 VTDCPWDIRECLFPQCALSKVSFPHYASKWIDARKLFSSFYQISSGNLANMLTQLGMSFE 257
Query: 294 GRAHCGLDDAKNTARLLALLMHRG 317
GR H GLDD+KN AR+++ L+ G
Sbjct: 258 GREHSGLDDSKNIARIVSQLISDG 281
>gi|405958600|gb|EKC24712.1| 3'-5' exoribonuclease 1 [Crassostrea gigas]
Length = 405
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ Y ++IDFEATC ++ Y EIIEFP+V+V T ++ F + +P N L++FC
Sbjct: 149 YDYLIIIDFEATCQENNLNYNHEIIEFPAVLVDCHTREIVDEFHEFCKPIINPRLTEFCC 208
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENK--GIKNTNFAVVTWSNWDCRVMLESECRFK 252
LTGI Q VD+ L R + W+ + G+ +T FAVVT WD L+ +C F
Sbjct: 209 GLTGITQDVVDKADEFPAVLERMESWMSSHYLGVDHT-FAVVTDGPWDMSRFLQMQCNFS 267
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
KI P + +WIN++ + + R NL+E + GL +QG HCGL D++N AR+
Sbjct: 268 KIHFPHWGKKWINIRKAYSSYYSCKRMNLEEMLINLGLKFQGTQHCGLHDSRNIARIAIQ 327
Query: 313 LMHRG 317
L++ G
Sbjct: 328 LLNDG 332
>gi|116666695|pdb|1ZBU|A Chain A, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666696|pdb|1ZBU|B Chain B, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666697|pdb|1ZBU|C Chain C, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666698|pdb|1ZBU|D Chain D, Crystal Structure Of Full-Length 3'-Exonuclease
Length = 349
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+F + Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N
Sbjct: 121 NFADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 180
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLE 246
LSDFC LTGI Q QVDR T + L + + K + ++++T +WD L
Sbjct: 181 QLSDFCISLTGITQDQVDRADTFPQVLKKVIDLXKLKELGTKYKYSLLTDGSWDXSKFLN 240
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAK 304
+C+ ++ PP+ +WIN++ + + R K + E G + GR HCGLDD+K
Sbjct: 241 IQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSK 300
Query: 305 NTARLLALLMHRGFKFSI 322
N AR+ + G + I
Sbjct: 301 NIARIAVRXLQDGCELRI 318
>gi|351698003|gb|EHB00922.1| 3'-5' exoribonuclease 1 [Heterocephalus glaber]
Length = 348
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YV+P N LSDFC
Sbjct: 126 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINTQLSDFC 185
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + + ++T +WD L +C+
Sbjct: 186 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQLS 245
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 246 RLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 305
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 306 VRMLQDGCELRINEKM 321
>gi|195162323|ref|XP_002022005.1| GL14409 [Drosophila persimilis]
gi|194103903|gb|EDW25946.1| GL14409 [Drosophila persimilis]
Length = 223
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 114/210 (54%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+++V+ TG +EA F YV P + LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD + L EC K I KP FN+WI+ + + + + + A+E L +QGRA
Sbjct: 122 TNWDFGICLAKECARKNIRKPTCFNQWIDARAIYKKWYKYCPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ G+DDAKN L+ + G FSIT L
Sbjct: 182 YSGIDDAKNLGILICKMFRDGAPFSITKDL 211
>gi|17541516|ref|NP_500418.1| Protein M02B7.2 [Caenorhabditis elegans]
gi|373937875|emb|CCD70202.1| Protein M02B7.2 [Caenorhabditis elegans]
Length = 266
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNP-YP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q F Y +V+DFEATC + K P +P QEIIEFP V +S+ F Y++PT L
Sbjct: 56 QHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYIKPTEFPRL 115
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LT I Q VD L E L D WL E+ +K NFA VT +WD +V L SE
Sbjct: 116 TSFCTSLTRIIQEMVDEKPKLPEVLSEFDSWLKEDSRLKQGNFAFVTCGDWDLKVALPSE 175
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P YFN+WIN+K + E + + + + L QGR H G+DD N
Sbjct: 176 AKFKNIEIPEYFNQWINVKKAYAEHTNHFAKGMTQLLAIYKLQHQGRLHSGIDDVANICE 235
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT S
Sbjct: 236 IVRCLGRDGHNYRITGS 252
>gi|195162331|ref|XP_002022009.1| GL14413 [Drosophila persimilis]
gi|194103907|gb|EDW25950.1| GL14413 [Drosophila persimilis]
Length = 223
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 111/210 (52%), Gaps = 20/210 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
F Y + +DFEATC +++ P Q EIIEFP+ +V+ TG +EA F YV P + LS
Sbjct: 4 FTYAISVDFEATCWENQ-PAQQFRLSEIIEFPANLVNLKTGMVEAEFHKYVMPVESPQLS 62
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--------------VTW 236
++C LTGIQQ V+ GV L AL +WL+ K + N + VTW
Sbjct: 63 EYCTSLTGIQQKTVEAGVPLQTALNSFIEWLK-KELSARNLVLPKMSMTNPQGNCFFVTW 121
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRA 296
+NWD L EC K I KP FN+WI+ K + + + + A+E L +QGRA
Sbjct: 122 TNWDFETCLAKECARKNIRKPTCFNQWIDAKAIYKKWYKYCPFSFNNALEHVRLTFQGRA 181
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G+ DAKN L+ + G FSIT L
Sbjct: 182 HSGMHDAKNLGSLICKMFRDGAPFSITKDL 211
>gi|395541883|ref|XP_003772866.1| PREDICTED: 3'-5' exoribonuclease 1 [Sarcophilus harrisii]
Length = 469
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 247 YDYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 306
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VDR T + L W+ K + ++++T +WD L +C+
Sbjct: 307 INLTGITQDMVDRADTFPQVLRNVVDWMRLKELGTKYKYSILTDGSWDMSKFLNIQCQIS 366
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R K + E G+++ GR H GLDD+KN AR+
Sbjct: 367 RLRYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEKLGMSYDGRPHSGLDDSKNIARIA 426
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 427 VRMLRDGCELRVNEKM 442
>gi|241686335|ref|XP_002411687.1| exonuclease, putative [Ixodes scapularis]
gi|215504479|gb|EEC13973.1| exonuclease, putative [Ixodes scapularis]
Length = 337
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVR 182
PA + Q F YF+V+DFEATC ++K P +PQEIIEFP + V+ + Q+E+ F YV+
Sbjct: 92 PASNMTVREQPFDYFLVLDFEATCSREKPPPHPQEIIEFPVLKVNGRSFQVESTFHQYVQ 151
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI---KNTNFAVVTWSNW 239
P ++ LS FC +LTGI Q VD E L + +W+ ++G+ A VT+ +W
Sbjct: 152 PRVHRELSSFCTELTGIIQDMVDEQPFFEEVLEKFHQWMCSEGLLGPPEKRVAFVTFGDW 211
Query: 240 DCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCG 299
D + ML S+C + KI P Y WINLK F E G L E +E L GR H G
Sbjct: 212 DLQKMLPSQCSYFKIPVPEYLTSWINLKKAFVEATGHWPKTLPETLEYCRLEQVGRHHSG 271
Query: 300 L 300
+
Sbjct: 272 I 272
>gi|71662500|ref|XP_818256.1| phosphotransferase [Trypanosoma cruzi strain CL Brener]
gi|70883496|gb|EAN96405.1| phosphotransferase, putative [Trypanosoma cruzi]
Length = 539
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 24/251 (9%)
Query: 97 QMNSF-ESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQE---------FQYFVVIDFEAT 146
QM SF +++ ++ R A +N T P Q ++ F +VV+DFEAT
Sbjct: 8 QMASFFDTELSASIMQRRSCAAKHNRHTKPPPQKLQERQEDELPPSPFFDAYVVLDFEAT 67
Query: 147 CDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR 206
C++++ EIIEFP V++ + + ++ FQ YVRP N +LSDFC +LTGI+Q VD
Sbjct: 68 CERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCTELTGIKQSVVDA 127
Query: 207 GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDCRVMLESECRFKK-----IWKP 257
T ++L G ++ VT +WD + ML S+ R + I P
Sbjct: 128 AETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLRTTEKTGTAIVAP 187
Query: 258 PYFNRWINLKVPFHEVFG----GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
F RW NLKVP + G+ +L+E + GL +GR H G+DD +N A ++ L
Sbjct: 188 STFRRWCNLKVPMRTIVPTKARGI-FDLREMLAAVGLPLKGRHHSGIDDCRNIASVVQEL 246
Query: 314 MHRGFKFSITN 324
+ RG + T
Sbjct: 247 LRRGHVIAPTT 257
>gi|62079013|ref|NP_001014165.1| 3'-5' exoribonuclease 1 [Rattus norvegicus]
gi|78098993|sp|Q5FVR4.1|ERI1_RAT RecName: Full=3'-5' exoribonuclease 1; AltName: Full=Histone mRNA
3'-exonuclease 1
gi|58476450|gb|AAH89828.1| Three prime histone mRNA exonuclease 1 [Rattus norvegicus]
gi|149057952|gb|EDM09195.1| three prime histone mRNA exonuclease 1 [Rattus norvegicus]
Length = 345
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y +IDFEATC+ + NP + EIIEFP V++++ + ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEF 181
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +C+
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQL 241
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 310 LALLMHRGFKFSITNSL 326
++ G + I L
Sbjct: 302 AVRMLQDGCELRINEKL 318
>gi|66472518|ref|NP_001018450.1| 3'-5' exoribonuclease 1 [Danio rerio]
gi|63100708|gb|AAH95343.1| Exoribonuclease 1 [Danio rerio]
gi|182888732|gb|AAI64140.1| Eri1 protein [Danio rerio]
Length = 337
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F Y V+DFEATC+++ P Y EIIEFP V++ + T ++ FQ YV+P + LS+FC
Sbjct: 115 FDYICVVDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSEFC 174
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q VD T + L R WL+ K + + +T +WD L ++C+
Sbjct: 175 VKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQCKLS 234
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKE--AVEMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K +E G+ + GR HCGLDD++N AR+
Sbjct: 235 RIRYPQFARKWINIRKSYGNFYKVPRTQTKLICMLENLGMEYDGRPHCGLDDSRNIARIA 294
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + L
Sbjct: 295 IHMLKDGCQLRVNECL 310
>gi|118400656|ref|XP_001032650.1| exonuclease family protein [Tetrahymena thermophila]
gi|89286993|gb|EAR84987.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 215
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ-LEACFQTYVRPTCNQLLSDF 192
+F Y +++DFEATC+K+ QEIIEFP V++ Q L+ F Y++P+ N L+ F
Sbjct: 10 DFDYLLILDFEATCEKNVKLECQEIIEFPVVVLDVKNQQILDVFFHHYIKPSVNPKLTAF 69
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LTGI+Q QVD G++L EAL + +LE + ++F +T ++D L E +K
Sbjct: 70 CTELTGIKQEQVDNGISLQEALAQLTLFLEQNKLIGSSFTFITCGDFDLGNCLRREALYK 129
Query: 253 KIWKPPYFNRWINLKVPFHEVF-------GGVRC-NLKEAVEMAGLAWQGRAHCGLDDAK 304
KI P Y +IN+K F + + G R ++ ++ L G H G+DD+K
Sbjct: 130 KIEIPQYLKNYINIKKVFPKQYYPKQKKEGDNRLPDMVGMLQGLNLKLDGHHHSGIDDSK 189
Query: 305 NTARLLALLMHRGFKFS 321
N A++ L+ +GFKF+
Sbjct: 190 NIAKIALTLLQKGFKFN 206
>gi|348553710|ref|XP_003462669.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cavia porcellus]
Length = 343
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 121 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 180
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVDR T + L + W++ K + + ++T +WD L +C+
Sbjct: 181 IRLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQLC 240
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN A++
Sbjct: 241 RLKYPSFAKKWINVRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAKIA 300
Query: 311 ALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 301 VRMLQDGCELRINEKM 316
>gi|449278956|gb|EMC86684.1| Exonuclease domain-containing protein 1, partial [Columba livia]
Length = 186
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 16/184 (8%)
Query: 159 IEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHD 218
+EFP+V++++ TG++EA F TYV+P + +LSDFCK+LTGI Q QVD V L+ L +
Sbjct: 1 VEFPAVLLNTATGEIEAEFHTYVQPQKHPVLSDFCKELTGITQSQVDEAVPLNICLSQFW 60
Query: 219 KWL-----ENKGIKNTNF-----------AVVTWSNWDCRVMLESECRFKKIWKPPYFNR 262
KW+ E K I +++ VTW++WD V L+ EC+ K++ KP N
Sbjct: 61 KWIQKIQREKKIIFSSDIPSHSTSEAKLCTFVTWTDWDLGVCLQYECKRKQLRKPDILNS 120
Query: 263 WINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
WI+LK + + L A++ G+A+ GR H GLDD++NTARL L+ G +
Sbjct: 121 WIDLKATYRTFYNRKPKGLSGALQDLGIAFAGREHSGLDDSRNTARLAWRLICDGCVLKV 180
Query: 323 TNSL 326
T SL
Sbjct: 181 TKSL 184
>gi|323455145|gb|EGB11014.1| hypothetical protein AURANDRAFT_6072, partial [Aureococcus
anophagefferens]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 135 FQYFVVIDFEATCDKD-----KNPYPQEIIEFPSVIVSSVTGQ-----LEACFQTYVRPT 184
++Y VV+DFE TC D K P+ EIIEFP+V+V G+ FQ +VRPT
Sbjct: 1 YRYLVVVDFECTCVADTTYQKKTPFSHEIIEFPAVVVDLTLGESQDVFARPTFQRFVRPT 60
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVM 244
LSDFC LTGI Q VD L++ L WLE + + +A+ WD R
Sbjct: 61 ERPRLSDFCTKLTGISQETVDAAEPLADVLAAFRAWLEEQNLAPGTYAMAADGPWDLRKF 120
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDA 303
L EC K + P + W+++ + + + R NL+ + + GLA++GR H GLDDA
Sbjct: 121 LLGECARKHLAADPRWRTWVDVSLHLRKHYDVKRPGNLENKLALLGLAFEGRPHSGLDDA 180
Query: 304 KNTARLLALLMHRG 317
+N ARL L G
Sbjct: 181 RNIARLALRLRRDG 194
>gi|341890887|gb|EGT46822.1| hypothetical protein CAEBREN_23366 [Caenorhabditis brenneri]
Length = 273
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYP--QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q +Y +V+DFEATC ++ + P QEIIEFP V + + F YVRPT L
Sbjct: 61 QSLEYLLVLDFEATCQENARGPMQPVQEIIEFPVVQLRTSDWAEVRRFHQYVRPTECPKL 120
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LTGI Q VDR TLS L D W+ E+ +K NFA VT +WD +V L +E
Sbjct: 121 TSFCTSLTGIIQEMVDRQPTLSAVLEDFDAWMKEDSRLKTGNFAFVTCGDWDLKVALPNE 180
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P Y +WIN+K + + E +++ L QGR H G+DD N
Sbjct: 181 AKFKNIQTPEYMKQWINVKKAYAAHTNHFARGMPELLKIYNLKLQGRHHSGIDDVANICE 240
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT S
Sbjct: 241 IVRCLGKDGHNYRITGS 257
>gi|345487306|ref|XP_003425664.1| PREDICTED: ERI1 exoribonuclease 3-like [Nasonia vitripennis]
Length = 225
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 3/202 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Q +V+DFEATC KD PQEIIEFP ++VS+ Q++ F YV+P N LSDFC
Sbjct: 23 LQNLLVLDFEATCVKDVILKPQEIIEFPCLVVSTEDWQVKDAFHEYVKPRINPKLSDFCT 82
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q ++ E + W+E+ + A VT +WD +VML S+C
Sbjct: 83 ELTGIMQETLENEEHFPEVFSKFCSWIEDGNYFDEKDKSAFVTCGDWDLKVMLPSQCELD 142
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P Y WINLK F + +L + + + +QG+ HCG+DD N R++
Sbjct: 143 NINVPDYLKEWINLKSSFCLMTKYYPRSLADMLRHLNMKFQGKNHCGIDDVHNMTRVIQK 202
Query: 313 LMHR-GFKFSITNSLMWQTNDG 333
L + +F+I + +T D
Sbjct: 203 LADKYKAEFTINTKIEEETKDS 224
>gi|209154444|gb|ACI33454.1| Histone mRNA 3-exonuclease 1 [Salmo salar]
Length = 346
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y V+DFEATC++D NP + EIIEFP V++++ T ++E FQ YVRP N LS+F
Sbjct: 124 YDYICVVDFEATCEQD-NPADFTHEIIEFPMVLLNTHTLEIEDTFQEYVRPEVNTQLSEF 182
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 251
C LTGI Q VD T + L + WL+ K + + ++T +WD + ++CR
Sbjct: 183 CVKLTGITQKMVDDADTFPDVLEQVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQCRL 242
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ P + +WIN+K + + R L +E GL ++GR H GLDD++N A +
Sbjct: 243 NSLRYPQFAKKWINIKKLYGNFYKVPRTQTKLSSMLEKLGLKYEGRPHSGLDDSRNIAHI 302
Query: 310 LALLMHRGFKFSITNSL 326
++ G + I +
Sbjct: 303 AMRMLQDGCQLRINERM 319
>gi|161612020|gb|AAI55978.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
gi|161612114|gb|AAI55988.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ + Y EIIEFP V++++ T ++E FQ YVRP N LS+FC
Sbjct: 123 YDYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFC 182
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD+ + L W+ K + +A++T +WD L +CR
Sbjct: 183 VNLTGITQDIVDKSDIFPDVLRSVVDWMREKELGTKYKYAILTDGSWDMSKFLNMQCRVS 242
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R L +E G+ + GR H G+DD+KN AR+
Sbjct: 243 RLKYPRFAKKWINIRKSYGNFYKVPRTQTKLTTMLEKLGMTYDGRLHSGVDDSKNIARIA 302
Query: 311 ALLMHRGFKFSITNSL 326
A ++ G + + +
Sbjct: 303 AHMLQDGCELRVNERM 318
>gi|71651495|ref|XP_814425.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879394|gb|EAN92574.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 284
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 14/203 (6%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +VV+DFEATC++++ EIIEFP V++ + + ++ FQ YVRP N +LSDFC
Sbjct: 56 FDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCT 115
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDCRVMLESECR 250
+LTGI+Q VD T ++L G ++ VT +WD + ML S+ R
Sbjct: 116 ELTGIKQSVVDAAETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLR 175
Query: 251 FKK-----IWKPPYFNRWINLKVPFHEVFG----GVRCNLKEAVEMAGLAWQGRAHCGLD 301
+ I P F RW NLKVP + G+ +L+E + GL +GR H G+D
Sbjct: 176 TTEKTGTAIVAPSTFRRWCNLKVPMRTIVPTKARGI-FDLREMLAAVGLPLKGRHHSGID 234
Query: 302 DAKNTARLLALLMHRGFKFSITN 324
D +N A ++ L+ RG + T
Sbjct: 235 DCRNIASVVQELLRRGHVIAPTT 257
>gi|327279889|ref|XP_003224688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Anolis carolinensis]
Length = 343
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 8/205 (3%)
Query: 135 FQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ ++ + EIIEFP V++++ T ++E FQ YV+P N LSDFC
Sbjct: 122 YDYICVIDFEATCEEGNQLEFTHEIIEFPIVLINTRTLEIEDTFQQYVKPVINPQLSDFC 181
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q +VD+ + L W++ K + + ++A++T +WD L +CR
Sbjct: 182 INLTGISQERVDKADEFPKVLQSVIDWMKQKELGSRYSYAILTDGSWDMSKFLNIQCRVN 241
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN++ + + R L +E G+ + GR H GLDD++N A++
Sbjct: 242 RLRYPAFAKKWINIRKSYGNFYKVPRNQTKLSTMLEKLGMDYDGRPHSGLDDSRNIAQIA 301
Query: 311 ALLMHRGFKFSITNSLMWQTNDGSL 335
++ G + + +L DG L
Sbjct: 302 IRMLQDGCELRVNETLY----DGQL 322
>gi|17541752|ref|NP_499887.1| Protein R02D3.8 [Caenorhabditis elegans]
gi|351064690|emb|CCD73172.1| Protein R02D3.8 [Caenorhabditis elegans]
Length = 266
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNP-YP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q F Y +V+DFEATC + K P +P QEIIEFP V +S+ F YV+PT L
Sbjct: 56 QHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPTECPRL 115
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LTGI Q VD TL + L D WL E+ ++ FA VT +WD +V L +E
Sbjct: 116 TSFCTSLTGIIQEMVDEKPTLPQVLSEFDSWLKEDSRLEKGKFAFVTCGDWDLKVALPNE 175
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P YFN+WIN+K E + + + + L QGR H G+DD N
Sbjct: 176 AKFKNIGIPEYFNQWINVKKASAEHTNHFAKGIAQLLAIYKLQHQGRHHSGIDDVANICE 235
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT S
Sbjct: 236 IVRCLGMNGHNYQITGS 252
>gi|395835562|ref|XP_003790746.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 657
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 16/203 (7%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
+I ++ + NP + IEFP+V++++ TG +E+ F YV+P + +LS+FC +LTGI
Sbjct: 12 LIRRKSIAPANGNPGRSKSIEFPAVLLNTSTGDIESEFHAYVQPQEHPILSEFCMELTGI 71
Query: 200 QQIQVDRGVTLSEALLRHDKWLEN----------KGIKNTNF------AVVTWSNWDCRV 243
+Q QVD G L L + KW+ N G+ + A VTWS+WD V
Sbjct: 72 KQAQVDEGAPLKICLSQFCKWIHNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSDWDLGV 131
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR H GLDD+
Sbjct: 132 CLEYECKRKQLLKPVFLNSWIDLRAIYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDS 191
Query: 304 KNTARLLALLMHRGFKFSITNSL 326
+NTA L ++ G + IT SL
Sbjct: 192 RNTALLAWKMIRDGCQMKITRSL 214
>gi|390361519|ref|XP_781221.3| PREDICTED: ERI1 exoribonuclease 3-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ+F YF+V+DFEATC ++ PQE+IEFP + VS T + EA F YV P + + +
Sbjct: 73 PQDFDYFLVLDFEATCLDNERIEPQEVIEFPVLKVSGKTFETEATFHQYVEPQVHGV-GE 131
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN--TNFAVVTWSNWDCRVMLESEC 249
FC LTGI V T ++ L W+E +G+ + F VT +WD + M S+C
Sbjct: 132 FCTRLTGITPDMVKGQPTFADTLKLFHVWMEKEGLVDPEVKFIFVTCGDWDLKTMFPSQC 191
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
++ YF RW+N+K F V + + +E + GR H G+DD +N A +
Sbjct: 192 AHFELPYHSYFRRWLNIKKAFATVTSHYPKGMMQMLERLNIPHVGRHHSGIDDCRNIANI 251
Query: 310 LALLMHRGFKFSITNS 325
L L + +KF T S
Sbjct: 252 LQALALKRYKFKQTGS 267
>gi|119920012|ref|XP_001253741.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|297492734|ref|XP_002699843.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|296471031|tpg|DAA13146.1| TPA: three prime histone mRNA exonuclease 1-like [Bos taurus]
Length = 370
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEF V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
++ PP+ +WI+++ + + R +K + E G+ + G H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWISIQKSYGNFYKVPRSQIKLTIMLEKLGMDYDGWPHSGLDDSKNVARIA 306
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>gi|72387357|ref|XP_844103.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360611|gb|AAX81022.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800635|gb|AAZ10544.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 452
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYV 181
P +P+D Q F Y +V+D EATC+ + YP EIIE P V+V G + E F++YV
Sbjct: 132 PGNPFD--RQLFDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRRGVVDKERSFRSYV 189
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC 241
RP N LL+ FCK LTGI Q VD TL E + ++W + A+ T WD
Sbjct: 190 RPQRNPLLTPFCKALTGITQEDVDSAPTLQEVVKLFEQWYTETIPRGAKVALATDGPWDL 249
Query: 242 RVMLESECRFKK-IWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCG 299
+ + + I P F +++++ F F G L +E L ++GR HCG
Sbjct: 250 KNFVHEHSILRDHISFPTIFYEYLDIRTTFAHFFNRGTPLKLVPMLERLQLTFEGREHCG 309
Query: 300 LDDAKNTARLLALLMHRG--------------FKFSITNSLMWQTNDGS 334
DDA N ARL +M G F + + N+ +++ +GS
Sbjct: 310 FDDAVNIARLAVSMMRAGCVFNYLVAIPLTDEFHYDMPNTALYRRKEGS 358
>gi|321478169|gb|EFX89127.1| hypothetical protein DAPPUDRAFT_41461 [Daphnia pulex]
Length = 231
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 14/197 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
F Y+VVID+EATCD++ N + QEIIEFP+V+++ TG++EA FQ+Y RP N LL+
Sbjct: 26 FDYYVVIDYEATCDENHNNFDKNNQEIIEFPAVLLNCHTGKVEAEFQSYCRPVINPLLTK 85
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECR 250
+C LTGI Q VD+ + + L +KWL+ K + + +FA++T + D L+ +C
Sbjct: 86 YCIKLTGITQNIVDKAPSFHDVLASFEKWLQKKKLGSEYSFAILTDGSKDVGHFLKRQCV 145
Query: 251 FKKIWKPPYFNRWINLKVPFH--------EVFGGVRCN--LKEAVEMAGLAWQGRAHCGL 300
+I P Y WIN++ F + F + + L ++ G +QG+ H GL
Sbjct: 146 LSQIDIPEYCKYWINIRKSFTNFYQTNDLQYFARLANDTVLNIMIKEIGCKFQGKPHSGL 205
Query: 301 DDAKNTARLLALLMHRG 317
DDA+N A + L+ G
Sbjct: 206 DDARNIAYVAQCLLQDG 222
>gi|256083202|ref|XP_002577838.1| prion interactor pint1 [Schistosoma mansoni]
gi|360044777|emb|CCD82325.1| putative prion interactor pint1 [Schistosoma mansoni]
Length = 191
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTG 198
+V+DFEATC++D+ EIIEFP +++++ T Q EA F YVRPT N +LSDFC +LTG
Sbjct: 1 MVLDFEATCEQDRKLPVAEIIEFPVLMINASTLQTEAVFHRYVRPTINPVLSDFCTELTG 60
Query: 199 IQQIQVDRGVTLSEALLRHDKWLENKGIKNT--NFAVVTWSNWDCRVMLESECRFKKIWK 256
I Q VD L L + +L+ + FA VT + D + ML +C+ I
Sbjct: 61 IIQSMVDDQPDLPTVLKIFNSFLDANNLNTIPYQFAFVTCGDCDLKTMLPRQCKALGIDV 120
Query: 257 PPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
P YF +WINLK + V G + + + GR H G+DD N A +L L+
Sbjct: 121 PDYFKQWINLKQVYCNVMGQFPFGMMSMLSGLNIKHTGRHHSGIDDCHNIANILRELIRC 180
Query: 317 GFKFSITNSL 326
G +T ++
Sbjct: 181 GATLDVTGNI 190
>gi|449500377|ref|XP_002196066.2| PREDICTED: 3'-5' exoribonuclease 1-like [Taeniopygia guttata]
Length = 355
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y V+DFEATC++ P + EIIEFP V+V++ T ++E FQ YV+P N LSDFC
Sbjct: 133 YDYICVVDFEATCEEGNPPEFVHEIIEFPVVLVNTRTLEIEDTFQQYVKPEINPKLSDFC 192
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q VD+ + L +W+ + + +++++T +WD L ++CR
Sbjct: 193 ISLTGITQDIVDKADIFPQVLQNVIEWMRQRELGTKYSYSMLTDGSWDMSKFLNTQCRIS 252
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 253 RIKYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLENLGMNYDGRPHSGLDDSKNIARIA 312
Query: 311 ALLMHRGFKFSITNSL 326
++ G + +
Sbjct: 313 IRMLQDGCDLRVNERI 328
>gi|332023240|gb|EGI63496.1| Prion protein-interacting protein [Acromyrmex echinatior]
Length = 218
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+++Y +V+DFEATC++ PQEIIE P +VS+ +L+ F TYV+P + L+ F
Sbjct: 10 QKYEYLLVMDFEATCERYTVLKPQEIIELPCAVVSTCDWKLKDMFHTYVKPRVHPTLTPF 69
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD + +WL G K + VT NWD + ML S+C
Sbjct: 70 CTELTGIMQETVDDQPYFANVFSNFCEWLTKGGYFDKPEKSSFVTCGNWDLKTMLPSQCA 129
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F +W+ LK F E G +LK+ + + +GR H G+DD KN ++
Sbjct: 130 LDGITLPDQFKQWVELKYIFCESTGYYPKSLKDMLVRLNVPLKGRLHSGIDDVKNMVSII 189
Query: 311 ALLMHR-GFKFSITNSL 326
+L + +F IT+SL
Sbjct: 190 LVLKEKYNTQFKITSSL 206
>gi|261327259|emb|CBH10235.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 452
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYV 181
P +P+D Q F Y +V+D EATC+ + YP EIIE P V+V G + E F++YV
Sbjct: 132 PGNPFD--RQLFDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRRGVVDKERSFRSYV 189
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC 241
RP N LL+ FCK LTGI Q VD TL E + ++W + A+ T WD
Sbjct: 190 RPQRNPLLTPFCKALTGITQEDVDSAPTLQEVVKLFEQWYTETIPRGAKVALATDGPWDL 249
Query: 242 RVMLESECRFKK-IWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCG 299
+ + + I P F +++++ F F G L +E L ++GR HCG
Sbjct: 250 KNFVHEHSILRDHISFPTIFYEYLDIRTTFAHFFNRGTPLKLVPMLERLQLTFEGREHCG 309
Query: 300 LDDAKNTARLLALLMHRG--------------FKFSITNSLMWQTNDGS 334
DDA N ARL +M G F + + N+ +++ +GS
Sbjct: 310 FDDAVNIARLAVSMMRAGCVFNYLVAIPLTDEFHYDMPNTALYRRKEGS 358
>gi|383849952|ref|XP_003700597.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Megachile rotundata]
Length = 609
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +V+DFE+TC++ PQEIIEFP VS+ T +E F YV+P N L+ F
Sbjct: 418 QHFNYLLVVDFESTCERYVKMQPQEIIEFPCAAVSTRTWNIENVFHEYVKPKINPELTPF 477
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD E + KW+E N + N VT +WD + ML +C+
Sbjct: 478 CTELTGIIQDMVDNQPHFPEVFDKFCKWIEEHNYFTEGNNCVYVTCGDWDMKSMLPQQCK 537
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P +F +WINLK F +V +LK+ + L GR H G++D +N R++
Sbjct: 538 LDNIPVPDHFQKWINLKNIFCDVTQYYPRSLKDMLAFLKLPLHGRLHSGINDVENMVRII 597
Query: 311 ALL 313
L
Sbjct: 598 QAL 600
>gi|390370627|ref|XP_001187567.2| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 132 PQEFQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
P +F Y VID EATC ++ NP Y EIIEFP V++++ T Q+E F + +P N L
Sbjct: 220 PVQFDYLCVIDVEATC-QEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKPVINPQL 278
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESE 248
S FC LT I Q VD+ L + ++W+ KG+ + +FA+ T + D + L+ +
Sbjct: 279 SKFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGLGSKHSFAIATDCSLDMDLYLKLQ 338
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
C +I P Y W+N+ F ++ R L+ ++ GLA+ G+ H G+DDA+N AR
Sbjct: 339 CLVSEISYPQYAKEWVNISKVFANLYKTKRLPLRAMLDSTGLAFIGQPHRGIDDARNIAR 398
Query: 309 LLALLMHRG 317
+ L+ G
Sbjct: 399 VALQLIEDG 407
>gi|62859267|ref|NP_001016146.1| exoribonuclease 1 [Xenopus (Silurana) tropicalis]
gi|89268181|emb|CAJ81479.1| exonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ + Y EIIEFP V++++ T ++E FQ YVRP N LS+FC
Sbjct: 123 YDYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFC 182
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD+ + L W+ K + +A++T +WD L +CR
Sbjct: 183 VNLTGITQDIVDKSDIFPDVLRSVVDWMREKELGTKYKYAILTDGSWDMSKFLNMQCRVS 242
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P + +WIN+ + + R L +E G+ + GR H G+DD+KN AR+
Sbjct: 243 RLKYPRFAKKWINICKSYGNFYKVPRTQTKLTTMLEKLGMTYDGRLHSGVDDSKNIARIA 302
Query: 311 ALLMHRGFKFSITNSL 326
A ++ G + + +
Sbjct: 303 AHMLQDGCELRVNERM 318
>gi|407410790|gb|EKF33102.1| hypothetical protein MOQ_003039 [Trypanosoma cruzi marinkellei]
Length = 372
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 110/235 (46%), Gaps = 42/235 (17%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRPT N L+
Sbjct: 89 PQIFSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTS 148
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------NKGIKNTN--- 230
FC LTGI Q QVD L E L D+WL NK +K +
Sbjct: 149 FCTALTGITQAQVDAAPRLPEVLRHFDRWLREVVYPLCRRWRKEHPEGLNKCLKASQKRR 208
Query: 231 -----------------FAVVTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPFHE 272
+VT WD R M E + PP F RW+N++ F E
Sbjct: 209 LVCDETHNPGWVDCERMICMVTDGPWDMRKFMYECSVVRDGHFFPPIFYRWVNVRHSFAE 268
Query: 273 VFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK---FSITN 324
F L + ++ GL++ G H G+DD++N AR++ L+ RG++ FS N
Sbjct: 269 HFRMRPRKLTDMLKKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVHHFSTIN 323
>gi|449270665|gb|EMC81322.1| 3'-5' exoribonuclease 1, partial [Columba livia]
Length = 312
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y V+DFEATC++ P + EIIEFP V++++ T ++E FQ YV+P N LS+FC
Sbjct: 90 YDYICVVDFEATCEEGNPPEFVHEIIEFPVVLLNTRTLEIEDTFQQYVKPEINPKLSNFC 149
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLEN--KGIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI Q VD+ T + L +W+ G K T ++++T +WD L +CR
Sbjct: 150 INLTGITQEVVDKADTFPQVLQNVIEWMRQWELGTKYT-YSMLTDGSWDMSKFLNIQCRI 208
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 309
+I P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 209 SRIKYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEQLGMNYDGRPHSGLDDSKNIARI 268
Query: 310 LALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 269 AIRMLQDGCELRVNEQM 285
>gi|307191666|gb|EFN75140.1| Prion protein-interacting protein [Harpegnathos saltator]
Length = 225
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F+Y +V+DFEATC+K + PQEIIE P ++S+ +L+ F Y++P + +L+ F
Sbjct: 10 QNFEYLLVMDFEATCEKHQPLKPQEIIELPCAVLSTRDWKLKDVFHEYIKPRVHPILTPF 69
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD + +WL G ++ VT NWD +VML S+C+
Sbjct: 70 CTELTGIIQDIVDNQPYFPDVFSNFCEWLTKGGYFDESNKSTFVTCGNWDLKVMLPSQCK 129
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F +WI+LK F E +L + + + QGR H G+DD KN ++
Sbjct: 130 LDGITLPDQFKQWIDLKHTFSEFSMYYPRSLPDMLTRLNIPLQGRLHSGIDDVKNMVAII 189
Query: 311 ALLMHR-GFKFSITNS 325
L + +F IT+S
Sbjct: 190 QTLQEKYNVQFKITSS 205
>gi|390347745|ref|XP_796324.3| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 132 PQEFQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
P +F Y VID EATC ++ NP Y EIIEFP V++++ T Q+E F + +P N L
Sbjct: 220 PVQFDYLCVIDVEATC-QEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKPVINPQL 278
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESE 248
S FC LT I Q VD+ L + ++W+ KG+ + +FA+ T + D + L+ +
Sbjct: 279 SKFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGLGSKHSFAIATDCSLDMDLYLKLQ 338
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
C +I P Y W+N+ F ++ R L+ ++ GLA+ G+ H G+DDA+N AR
Sbjct: 339 CLVSEIPYPQYAKEWVNISKVFANLYKTKRLPLRAMLDSTGLAFIGQPHRGIDDARNIAR 398
Query: 309 LLALLMHRG 317
+ L+ G
Sbjct: 399 VALQLIEDG 407
>gi|57530089|ref|NP_001006450.1| 3'-5' exoribonuclease 1 [Gallus gallus]
gi|53130526|emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus]
Length = 327
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y V+DFEATC++ P + EIIEFP V++++ T ++E FQ YV+P N LS+FC
Sbjct: 105 YDYICVVDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINPKLSEFC 164
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
LTGI Q VD+ T + L W+ + + ++ ++T +WD L +CR
Sbjct: 165 VGLTGITQDIVDKADTFPQVLQNVVDWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCRVS 224
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K + E G+++ GR H GLDD+KN AR+
Sbjct: 225 RIKHPSFAKKWINIRKSYGNFYKVPRNQTKLMIMLEKLGMSYDGRPHSGLDDSKNIARIA 284
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 285 IRMLQDGCQLRVNEKM 300
>gi|407832341|gb|EKF98412.1| hypothetical protein TCSYLVIO_010686 [Trypanosoma cruzi]
Length = 379
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 118/263 (44%), Gaps = 45/263 (17%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRPT N L+
Sbjct: 89 PQIFSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNSRLTS 148
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------NKGIKNTN--- 230
FC LTGI Q QVD L E L D WL NK +K +
Sbjct: 149 FCTALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRR 208
Query: 231 -----------------FAVVTWSNWDCRVMLESECRFKKIWK--PPYFNRWINLKVPFH 271
+VT WD R + EC + PP F RW+N++ F
Sbjct: 209 FVYDETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFA 267
Query: 272 EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTN 331
E F L + + GL++ G H G+DD++N AR++ L+ RG++ +++ ++
Sbjct: 268 EHFRMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVHHVSTINYENA 327
Query: 332 DGSLTWNQF----PERIFLPPHQ 350
+ Q E PPHQ
Sbjct: 328 AAATAMAQLLGESDEDGTKPPHQ 350
>gi|449476440|ref|XP_002192871.2| PREDICTED: ERI1 exoribonuclease 2 [Taeniopygia guttata]
Length = 451
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 16/184 (8%)
Query: 159 IEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHD 218
+EFP+V++++ TG +E+ F YV+P + +LS+FC +LTGI Q QVD+GV L+ L +
Sbjct: 30 VEFPAVLLNTSTGAIESEFHMYVQPQEHPILSEFCTELTGITQNQVDQGVPLNICLSQFL 89
Query: 219 KWLE----------------NKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNR 262
KW++ N + A VTW++WD V L EC+ K++ KP N
Sbjct: 90 KWVQKLQKEKKITFSTDSQSNSTSEAKACAFVTWTDWDLGVCLHYECKRKQLRKPDILNS 149
Query: 263 WINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
WI+LK + + L A++ G+A++GR H GLDD++NTARL L+ G +
Sbjct: 150 WIDLKATYRAFYNRKPKGLNGALQDLGIAFEGREHSGLDDSRNTARLAWRLICDGCVLKV 209
Query: 323 TNSL 326
T SL
Sbjct: 210 TKSL 213
>gi|71417701|ref|XP_810631.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875192|gb|EAN88780.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 379
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 118/263 (44%), Gaps = 45/263 (17%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRPT N L+
Sbjct: 89 PQIFSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTS 148
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------NKGIKNTN--- 230
FC LTGI Q QVD L E L D WL NK +K +
Sbjct: 149 FCTALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRR 208
Query: 231 -----------------FAVVTWSNWDCRVMLESECRFKKIWK--PPYFNRWINLKVPFH 271
+VT WD R + EC + PP F RW+N++ F
Sbjct: 209 FVYDETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFA 267
Query: 272 EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTN 331
E F L + + GL++ G H G+DD++N AR++ L+ RG++ +++ ++
Sbjct: 268 EHFRMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVHHVSTINYENA 327
Query: 332 DGSLTWNQF----PERIFLPPHQ 350
+ Q E PPHQ
Sbjct: 328 AAATAVAQLLGESDEDGTKPPHQ 350
>gi|157870091|ref|XP_001683596.1| putative phosphotransferase [Leishmania major strain Friedlin]
gi|68126662|emb|CAJ04503.1| putative phosphotransferase [Leishmania major strain Friedlin]
Length = 582
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 111/221 (50%), Gaps = 27/221 (12%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
PY PQ F +VV+DFEATC+ D+ E+IEFP V++ + T A FQ YVRP N
Sbjct: 48 PY-IAPQPFDAYVVLDFEATCEADRRISDAEVIEFPMVLIDARTATPVAEFQRYVRPVKN 106
Query: 187 QLLSDFCKDLTGIQQIQVDR----GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSN 238
+LS FC +LTGI Q V R V EAL ++L G+ + ++ VVT +
Sbjct: 107 PVLSRFCTELTGITQDMVSRCDPFPVVYCEAL----QFLAEAGLGDAPPMRSYCVVTCGD 162
Query: 239 WDCRVMLESECRFK-KIWKPPYFNRWINLKVPFHEVFGGVR-------------CNLKEA 284
WD + ML ++ R + P F RW NLK ++ G + +
Sbjct: 163 WDLKTMLPAQMRVSGQQGTPLSFQRWCNLKKRMSQLGFGNGSGCGGGAAPPLGPSGMPDM 222
Query: 285 VEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
++M GL QGR H G+DD +N A L L+ RG +T S
Sbjct: 223 LQMLGLPLQGRQHSGIDDCRNLAAALCTLLRRGLVIDVTFS 263
>gi|322787625|gb|EFZ13665.1| hypothetical protein SINV_06869 [Solenopsis invicta]
Length = 254
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 3/197 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F+Y +V+DFEATC++ + PQEIIE P ++S+ +L+ F +YV+P + L+ F
Sbjct: 36 QKFEYLLVLDFEATCERYQVIKPQEIIELPCAVLSTHDWKLKDMFHSYVKPRVHPTLTPF 95
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD + +WL +G + + VT NWD + ML ++C
Sbjct: 96 CTELTGIMQETVDGQPYFVDVFPIFCEWLTKRGYFDRPEKSSFVTCGNWDLKTMLPNQCD 155
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKN-TARL 309
I P F +WI+LK F E G +LK+ + + +GR H G+DD KN + +
Sbjct: 156 LDGIAPPDQFKQWIDLKHMFCESTGYYPKSLKDMLARLNMPLKGRLHSGIDDVKNMISIM 215
Query: 310 LALLMHRGFKFSITNSL 326
LAL +F IT+SL
Sbjct: 216 LALKEKYNTQFKITSSL 232
>gi|268552995|ref|XP_002634480.1| Hypothetical protein CBG10739 [Caenorhabditis briggsae]
Length = 279
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKDK-NPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q+F Y +++DFEATC ++ P QEIIEFP V +S+ F YVRPT L
Sbjct: 62 QQFDYLLILDFEATCQENSLGPMLPVQEIIEFPVVQLSTSDWSEIRRFHQYVRPTECPKL 121
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
S FC LTGI Q VD T+S L D+W+ E+ ++ NFA VT +WD +V L +E
Sbjct: 122 SSFCTTLTGIIQEMVDDKPTISNVLENFDEWMKEDSRLEKGNFAFVTCGDWDLKVALTNE 181
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK + P YF +WIN+K + + + +++ L +GR H G+DD N
Sbjct: 182 AKFKNLKIPEYFTQWINVKKAYAAHTNHFAKGMTQLLKIYDLQHKGRHHSGIDDVANICE 241
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT+S
Sbjct: 242 IVRCLGKDGHNYRITSS 258
>gi|321471838|gb|EFX82810.1| hypothetical protein DAPPUDRAFT_195366 [Daphnia pulex]
Length = 228
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Query: 133 QEFQYFVVIDFEATCDKDKNPY-PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +V+DFEATCD + PQEIIEFP + V + + F YV+P + L+
Sbjct: 32 QRFERLLVLDFEATCDSQRGTIRPQEIIEFPVLNVETNGFETVGTFHRYVKPQVHPTLTP 91
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FC LTGI Q V+ L E + KWL ++ + N FAVVT +WD + +L +
Sbjct: 92 FCTSLTGIIQDMVEDAAPLKEVMEDFHKWLLSQHLLNKEFAVVTCGDWDLKELLPRQFLH 151
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
P YF WIN+K+ F E G NL + A L GR H G+DD N A ++
Sbjct: 152 TGQVVPAYFKSWINIKMIFAESTGVYPRNLPHMLSHAKLVHFGRLHSGIDDCHNIAAVVR 211
Query: 312 LLMHRGFKFSITNSL 326
L R ++ +T+ L
Sbjct: 212 FLGRRSSQWRLTSFL 226
>gi|167522769|ref|XP_001745722.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776071|gb|EDQ89693.1| predicted protein [Monosiga brevicollis MX1]
Length = 320
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F+ V+DFEATC+++++P+P EIIE P++++ + +G+L FQTYVRP N LS F
Sbjct: 96 QPFELVCVMDFEATCEEERSPFPHEIIEIPAILLDAKSGELLDTFQTYVRPKLNPQLSKF 155
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL--------ENKGIKNTNFAVVTWSNWDCRVM 244
C +LTGI Q QVD EA + +L + + + + WD R
Sbjct: 156 CTNLTGITQDQVDAAKLFPEAWQDFEDFLGKAVQKFKASHDVDDVRVLCASDGPWDFRDF 215
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVF---------GGVRCNLKEAVEMAGLAWQGR 295
L +C+ ++ P +W++++ + F L ++ GL ++GR
Sbjct: 216 LAFQCQLSQMDYPAVCQQWMDVRKRLTKHFKLKWAGPERAAYATGLDFMLQAVGLTFEGR 275
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITN 324
H G+DD++N ARL+ +L+ G + S+T+
Sbjct: 276 PHSGIDDSRNIARLVQVLIDEGAQLSVTH 304
>gi|444721415|gb|ELW62152.1| ERI1 exoribonuclease 3 [Tupaia chinensis]
Length = 349
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 157 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 215
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 216 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 275
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGL 300
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+
Sbjct: 276 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGI 330
>gi|393907515|gb|EFO17571.2| exonuclease [Loa loa]
Length = 267
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F YF+V+DFEATC++ P QEIIEFP + +S + + F YV+PT +L+
Sbjct: 57 QNFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKPTERPILTS 116
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN------TNFAVVTWSNWDCRVML 245
FC +LTGI Q V +L E L DKWL N + N ++F +T +WD V+L
Sbjct: 117 FCTELTGIVQETVASQESLPEVLDAFDKWLINSNLINADHSMKSHFTFITCGDWDLGVLL 176
Query: 246 ESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
SE ++ + P YF RWINLK F + G +L + L GR H G+DD +N
Sbjct: 177 PSEANYRNLKLPDYFKRWINLKKAFCKWNGYFAKSLTVMLHDLELNHLGRLHSGIDDVRN 236
Query: 306 TARLLALLMHRGFKFSITNSLMWQTND 332
++ L G F T+ + + +D
Sbjct: 237 MCQITRSLAKSGCVFQNTSIYVDEKHD 263
>gi|66811074|ref|XP_639244.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
gi|60467872|gb|EAL65886.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
Length = 220
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q+F+Y +V+DFEATC+KD QEIIEFPSVI+++ T + + F+ YV+P N LS F
Sbjct: 19 QKFKYLIVLDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREYVKPIINPNLSKF 78
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLEN---KGIKNTNFAVVTWSNWDCRVMLESEC 249
C +LTGI+Q V+ + L H W K I++ + V +WD L +
Sbjct: 79 CTELTGIKQETVENAALFPDVLKSHCDWFFESLPKDIQSDEYCFVCCGDWDLLQCLPKQL 138
Query: 250 RF-KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ + KP Y ++WIN+K + + + + + +GR HCGL D+ N ++
Sbjct: 139 KLCNNLSKPSYLSKWINIKKQYTLFYNRPSFGMTNMLRELNIPLEGRHHCGLSDSLNISK 198
Query: 309 LLALLMHRGFKFSITNSL 326
+L ++ G F + +++
Sbjct: 199 ILKRMIEEGCNFDLVSTM 216
>gi|341877999|gb|EGT33934.1| hypothetical protein CAEBREN_06895 [Caenorhabditis brenneri]
Length = 215
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYP--QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
Q +Y +V+DFEATC ++ K P QEIIEFP V + + F YVRP L
Sbjct: 3 QSLEYLLVLDFEATCQENSKGPMQPVQEIIEFPVVQLRTSDWAEIRRFHQYVRPIECPKL 62
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ FC LTGI Q VD TLS L D W+ E+ +K NFA VT +WD +V L +E
Sbjct: 63 TSFCTSLTGIIQEMVDGQPTLSAVLEDFDAWMKEDSRLKTGNFAFVTCGDWDLKVALPNE 122
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+FK I P Y +WIN+K + + E +++ L QGR H G+DD N
Sbjct: 123 AKFKNIQIPEYMKQWINVKKAYAAHTNHFARGMPELLKIYNLKLQGRHHSGIDDVANICE 182
Query: 309 LLALLMHRGFKFSITNS 325
++ L G + IT S
Sbjct: 183 IVRCLGKDGHNYRITGS 199
>gi|402854302|ref|XP_003891813.1| PREDICTED: ERI1 exoribonuclease 3 [Papio anubis]
Length = 458
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 10/181 (5%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 234 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 292
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 293 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 352
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDD 302
+C++ + YF +WINLK + G C K ++M GL+ Q GR H G+
Sbjct: 353 GQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIGQ 409
Query: 303 A 303
+
Sbjct: 410 S 410
>gi|260805280|ref|XP_002597515.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
gi|229282780|gb|EEN53527.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
Length = 279
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 122 LTPAHPYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTY 180
LTP + + + + +VIDFEATC ++ P + EIIEFP ++V++ T +E F +Y
Sbjct: 53 LTP-EVVGIKSEHYDFLLVIDFEATCMEENPPDFQHEIIEFPILLVNTETLIVEDQFHSY 111
Query: 181 VRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK--GIKNTNFAVVTWSN 238
RPT N L+ FC LTGI Q VD+ + L W+ +K G+ ++ FAV T
Sbjct: 112 CRPTINPKLTPFCTKLTGITQKMVDKAPEFPQVLEDVLDWMSSKGYGMGHSRFAVATDGP 171
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLK---VPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
WD L +C + I P F RWIN+K F++ GG + L+E + GL ++G+
Sbjct: 172 WDMCRFLYQQCLYCGIPYPRPFRRWINVKKHFANFYQTRGGTK--LQEMLASLGLQFEGK 229
Query: 296 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
H G DDA N AR+ L+ G + + L
Sbjct: 230 PHSGRDDAVNIARIAGRLIQDGCELRVNECL 260
>gi|118366139|ref|XP_001016288.1| exonuclease family protein [Tetrahymena thermophila]
gi|89298055|gb|EAR96043.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 559
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+Y VIDFE TCD++K QEIIEFP V++ ++ F ++VRPT +L+ FC
Sbjct: 58 LEYLFVIDFECTCDEEKRLKIQEIIEFPIVVIDLRKKEIIDRFHSFVRPTQYPILTPFCT 117
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN--TNFAVVTWSNWDCRVMLESECRFK 252
LTGI Q QVD TL E L D++LE K IK+ +V+ + D R L E FK
Sbjct: 118 KLTGITQEQVDSAPTLPEVLKEVDRFLE-KYIKDGLQKVSVLNDCDSDIRNFLRKETTFK 176
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P F +I+L+ F N+ + GL ++G HCGLDDA N AR+
Sbjct: 177 GIPVKPVFKEFIDLRRIFPVKISEKPTNIDHMLSCVGLTFEGVKHCGLDDATNIARVALE 236
Query: 313 LMHRGFKFS 321
+ R + ++
Sbjct: 237 IAKRDYIYT 245
>gi|342185674|emb|CCC95159.1| putative phosphotransferase [Trypanosoma congolense IL3000]
Length = 582
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +V++DFEATC++ K E+IEFP +++ ++TG+ A FQ YVRP N LSDFC
Sbjct: 75 FDVYVILDFEATCERGKRICVPEVIEFPMILLDALTGRTIAEFQQYVRPVVNPRLSDFCT 134
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA----VVTWSNWDCRVMLESECR 250
+L GI+Q VD+ T +L+ G +T + +T+ +WD + ML + +
Sbjct: 135 ELVGIRQETVDKADTFPSVFSSAMNFLQQNGCGDTPSSKRHLFITFGDWDLKTMLPLQLQ 194
Query: 251 F-----KKIWKPPYFNRWINLKVPFHEVF------GGVRC--NLKEAVEMAGLAWQGRAH 297
I PP+ RW N+K ++ G+R ++ + + + L QGR H
Sbjct: 195 ACCDQGVSICVPPFLRRWCNIKRLMQQMLFQGVWQAGLRFIRDIPDMMNILSLEMQGRHH 254
Query: 298 CGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFP 341
G+DD +N A +A L+ G+ F+ T T++ LT +P
Sbjct: 255 SGIDDCRNIAAAVAKLIQAGYVFAPT------TDNSGLTPPNYP 292
>gi|342180402|emb|CCC89879.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 382
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 18/220 (8%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA--CFQTYVRPTCNQLLS 190
Q F Y +V+D EATCD + YP EIIE P V+V G ++ F +YVRP N +L+
Sbjct: 65 QLFDYLIVVDVEATCDDNSKNYPHEIIELPGVLVDVRRGIVDKQRSFHSYVRPRRNPILT 124
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VMLESEC 249
FCK LTGI+Q VDR +L E + ++W + T WD + + E
Sbjct: 125 PFCKALTGIKQEDVDRAPSLPEVVKLFEEWYMETIPLGAKVVLATDGPWDLKNFVYEHSV 184
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P F +I+++ F F GV L + L ++GR HCG DDA N AR
Sbjct: 185 LRDHVSFPTLFWEYIDIRTTFSNHFNRGVPIKLTAMLHRMHLEFEGRQHCGFDDAVNIAR 244
Query: 309 LLALLMHRG--------------FKFSITNSLMWQTNDGS 334
L +M G F + I N+ M++ +GS
Sbjct: 245 LAVAMMRAGCVLNFLVAIPLVEKFYYRIPNTTMYRREEGS 284
>gi|326925262|ref|XP_003208837.1| PREDICTED: ERI1 exoribonuclease 3-like [Meleagris gallopavo]
Length = 484
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 157 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 215
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD +L + L R D+W+ +G+ + + VT +WD +VML
Sbjct: 216 TPFCTELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPG 275
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLD 301
+C++ + YF +WINLK + G + L + + L GR H G++
Sbjct: 276 QCQYLGLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIE 330
>gi|241896984|ref|NP_001155946.1| exoribonuclease 1 [Acyrthosiphon pisum]
Length = 340
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
F YFVVID EATC ++ NP Y EIIEFP+V+V + ++ FQ +V+P+ N LS+F
Sbjct: 92 FPYFVVIDIEATCTEN-NPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPSINPKLSEF 150
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENK--GIKNTNFAVVTWSNWDCRVMLESECR 250
C LTGI Q Q+D + L R KWLE GIK+ F++VT +D L +C
Sbjct: 151 CIKLTGITQDQIDNADSFEVCLTRFTKWLEEHELGIKH-KFSIVTDGPFDMARFLYGQCL 209
Query: 251 FKKIWKPPYFNRWINLKVPF------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+I P + +WIN++ F +V V CNL + + ++G H GLDD+
Sbjct: 210 MSEIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEFEGNPHSGLDDSF 269
Query: 305 NTARLLALLMHRG 317
N +R+ L+ G
Sbjct: 270 NISRICIRLLEDG 282
>gi|301603560|ref|XP_002931486.1| PREDICTED: ERI1 exoribonuclease 3 [Xenopus (Silurana) tropicalis]
Length = 338
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F TYV+P + L
Sbjct: 122 FPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQL 180
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLES 247
+ FC +LTGI Q VD TLS+ L R D+W+ +G+ + + VT +WD ++ML
Sbjct: 181 TPFCTELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLPG 240
Query: 248 ECRFKKIWKPPYFNRWINLK 267
+C + + YF +WINLK
Sbjct: 241 QCEYLGLQVADYFKQWINLK 260
>gi|118387765|ref|XP_001026985.1| exonuclease family protein [Tetrahymena thermophila]
gi|89308755|gb|EAS06743.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 251
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ-LEACFQTYVRPTCNQLLSDF 192
+F + +++DFEATC D+ QEIIEFP VI+ L F TYV+PT + +L+ F
Sbjct: 17 DFDFLLILDFEATCSNDEKLNVQEIIEFPIVILDLKKNVILPEYFHTYVKPTYHPILTKF 76
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LT I Q QVD GV L A+ + D++L GI + FA V ++D L E +FK
Sbjct: 77 CTELTHITQEQVDNGVILESAIQQADEFLNKMGIIDKKFAFVCCGDFDLGQCLRLEAKFK 136
Query: 253 KIWKPPYFNRWINLKVPFHE---VFGGVRCN----LKEAVEMAGLAWQGRAHCGLDDAKN 305
KI P YF ++IN+K F + ++ N + ++ L QG H GLDD+KN
Sbjct: 137 KINYPQYFKQYINIKKQFPKEWYTESIIKWNKPPGMVAMLKAINLELQGTHHSGLDDSKN 196
Query: 306 TARLLALLMHRGF 318
AR+ ++
Sbjct: 197 IARIAQFMVEHNI 209
>gi|260801283|ref|XP_002595525.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
gi|229280772|gb|EEN51537.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
Length = 222
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 136 QYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+Y+ V+DFEATC K + + EIIEF +VIV Q+ F + RP N +L FCK
Sbjct: 8 KYYCVVDFEATCIKPRRADFRTEIIEFGAVIVDGSNFQMADEFHEFCRPVENPVLHQFCK 67
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+LTGIQQ VD R KWL N+G+ ++NFA+VT +DC ++ S+C ++
Sbjct: 68 ELTGIQQDTVDSADPFPVVFDRFQKWLSNRGLIDSNFALVTDGIFDCNQIMRSQCEVSQM 127
Query: 255 WKPPYFNRWINLKVPFHEVFGGVRC-------NLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
P + R+ N+K+ + + F G+R + + + G++ +G+ H + DA+N
Sbjct: 128 SFPSFARRFSNIKIHYMQ-FMGIRLRRGQPTPRIPDMLRALGISQEGQLHSAISDARNIC 186
Query: 308 RLLALLMHR 316
R++ L R
Sbjct: 187 RIMEALSRR 195
>gi|341884091|gb|EGT40026.1| hypothetical protein CAEBREN_30328 [Caenorhabditis brenneri]
Length = 442
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y + DFE TC + YP EIIE P+V++ ++ + F+TYVRP N +LSDFC
Sbjct: 153 FDYLIATDFECTCVEVIYDYPHEIIELPAVLIDVRDKRIISEFRTYVRPVRNPVLSDFCV 212
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFK 252
D T I Q VD EAL + +W+ G+ K T FA VT D ++ +C
Sbjct: 213 DFTKIAQETVDEAPYFREALEKLYQWMRKFGLGEKKTRFAFVTDGPHDMWKFMQFQCLLS 272
Query: 253 KIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMA----GLAWQGRAHCGLDDAKNTA 307
I P F +IN+K + E F G V+ N K +E GL++ G H GLDDAKN A
Sbjct: 273 NIRMPHMFRNFINIKKTYKENFNGLVKGNGKSGIENMLDGLGLSFIGNKHSGLDDAKNIA 332
Query: 308 RLLALLM 314
+++ LM
Sbjct: 333 QIVIHLM 339
>gi|426204660|gb|AFY13248.1| ERI1 exoribonuclease 3-like protein, partial [Schistocerca
gregaria]
Length = 203
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y+V++DFEATC++ P YP EIIEFP+V+V+S ++E CFQ+Y RPT LS FC
Sbjct: 52 YPYYVIVDFEATCEEVNPPDYPHEIIEFPAVLVNSEKQEIEDCFQSYCRPTVKSTLSKFC 111
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q QVD+ T E L R + WL G+ +A+VT WD L +C+
Sbjct: 112 TELTGITQEQVDKAETFPEVLSRFEAWLVEHGLGTKYKYAIVTDGPWDMGRFLYGQCQLS 171
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLK 282
I P + +W N++ F + R LK
Sbjct: 172 GIPYPSFGKKWXNIRKTFXXFYKSKRYCLK 201
>gi|226372150|gb|ACO51700.1| Histone mRNA 3-exonuclease 1 [Rana catesbeiana]
Length = 348
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 135 FQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC+ + Y EIIEFP V++++ T ++E FQ YV+P LS+FC
Sbjct: 126 YDYICIIDFEATCEGGNATDYVHEIIEFPIVLLNTRTLEIEDTFQRYVKPEIKPQLSEFC 185
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q +D+ T L W+ K + +A++T +WD L +CR
Sbjct: 186 INLTGITQDIIDQADTFPVVLQSVVDWMRQKELGTKYKYAILTDGSWDMSKFLNMQCRVS 245
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 310
+I P + +WIN++ + + R K V E G+++ GR H GLDD+KN AR+
Sbjct: 246 RIKYPRFAKKWINIRKCYGNFYKVPRNQTKLTVMLEKLGMSYIGRLHSGLDDSKNIARIA 305
Query: 311 ALLMHRGFKFSITNSL 326
++ G + + +
Sbjct: 306 IHMLQDGCELRVNERM 321
>gi|403364890|gb|EJY82220.1| Phosphotransferase [Oxytricha trifallax]
Length = 460
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 135 FQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F Y V DFE C++ KN EIIEFP VI+ ++ A FQTYV+PT + L++FC
Sbjct: 232 FDYICVYDFECQCEEGTKNLTFNEIIEFPVVIIDVKAQKVVAEFQTYVKPTLHPELTEFC 291
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
LTGI+Q QVD GVT+ EA+ ++L G+ + F ++ ++D M E K
Sbjct: 292 TKLTGIEQKQVDEGVTIKEAIQLVHEFLGKNGVLESEFVFLSCGDFDGNQM-RREALHKG 350
Query: 254 IWKPPYFNRWINLKVPF-----------------HEVFGGVRCNLKEAVEMAGLAWQGRA 296
P Y RWIN+K F +V + +E+ GL +GR
Sbjct: 351 FDVPNYLKRWINIKKVFPKHLFDEKAAKNEVIFVKDVKKSAVSGMPHMLELCGLELEGRH 410
Query: 297 HCGLDDAKNTARLLALLMHRGFKFS 321
H G+DD KN AR + GF+F+
Sbjct: 411 HSGIDDCKNIARCAIKCLQEGFQFT 435
>gi|340720676|ref|XP_003398758.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus terrestris]
Length = 623
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +V+DFE TC K + PQEIIEFP VS+ + ++E F Y++P + L+ F
Sbjct: 411 QSFNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKPKYHPQLTPF 470
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKN-TNFAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD + E WL E+K K+ N A VT +WD + ML S+C
Sbjct: 471 CTELTGIIQDLVDNQLYFPEVFGTFCNWLEEHKYFKDGNNSAFVTCGDWDLKFMLPSQCE 530
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ I P F +WINLK F + NL + + L G+ H G+ D KN +++
Sbjct: 531 LENISLPKQFMKWINLKGSFCDATDHYPRNLTDMLSHLNLPLVGKLHSGISDVKNMVQII 590
Query: 311 -ALLMHRGFKFSITN 324
AL +F I N
Sbjct: 591 QALQSQHNVQFKINN 605
>gi|119627447|gb|EAX07042.1| prion protein interacting protein, isoform CRA_a [Homo sapiens]
Length = 213
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 59 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 117
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 118 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 177
Query: 247 SECRFKKIWKPPYFNRWINLK 267
+C++ + YF +WINLK
Sbjct: 178 GQCQYLGLPVADYFKQWINLK 198
>gi|320168778|gb|EFW45677.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 234
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
+ +PQ F+Y +V+DFEA CD+ P PQEIIEFP+V++ + T ++ F YVRP + +
Sbjct: 5 ELEPQSFRYLLVLDFEAVCDEVTRPKPQEIIEFPTVVLDTTTLEIVGSFHKYVRPVSHPI 64
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN--KGI-------------------- 226
L+ FC LTGI Q V T E H W+++ K +
Sbjct: 65 LTPFCTTLTGITQDMVSGQATFQEVFDEHLAWIQSFWKSLPPAANADADAASTASSSIPS 124
Query: 227 KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVE 286
+ +A VT +WD L + P + +WIN+K F +G + ++
Sbjct: 125 EAPTWAFVTCGDWDLNRALPDQLAALGKKSPAPYRQWINIKKEFAVKYGVSPPGMTAMLD 184
Query: 287 MAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
M L GR H G+DD +N A + ++ G F IT +
Sbjct: 185 MLRLDLVGRHHSGIDDCRNIAAVAKEMLRDGHVFEITGT 223
>gi|398015969|ref|XP_003861173.1| phosphotransferase, putative [Leishmania donovani]
gi|322499398|emb|CBZ34471.1| phosphotransferase, putative [Leishmania donovani]
Length = 570
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 109/217 (50%), Gaps = 25/217 (11%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
PQ F +VV+DFEATC++D+ E+IEFP ++V + T A FQ YVRP N +L
Sbjct: 50 IAPQPFDAYVVLDFEATCEEDRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVKNPVL 109
Query: 190 SDFCKDLTGIQQIQVDR----GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDC 241
S FC +LTGI Q V V EAL ++L G+ + ++ VVT +WD
Sbjct: 110 SRFCTELTGITQDMVSGRDPFPVVYCEAL----QFLAEAGLGDAPPMRSYCVVTCGDWDL 165
Query: 242 RVMLESECRFK-KIWKPPYFNRWINLKVPFHEVFGGVR------------CNLKEAVEMA 288
+ ML ++ R + P F RW NLK ++ G + + ++M
Sbjct: 166 KTMLPAQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQML 225
Query: 289 GLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
GL QGR H G+DD +N +L L+ RG +T S
Sbjct: 226 GLPLQGRHHSGIDDCRNLTAVLCALLRRGLVIDVTFS 262
>gi|146087811|ref|XP_001465911.1| putative phosphotransferase [Leishmania infantum JPCM5]
gi|134070012|emb|CAM68342.1| putative phosphotransferase [Leishmania infantum JPCM5]
Length = 570
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 25/217 (11%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
PQ F +VV+DFEATC+ D+ E+IEFP ++V + T A FQ YVRP N +L
Sbjct: 50 IAPQPFDAYVVLDFEATCEADRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVKNPVL 109
Query: 190 SDFCKDLTGIQQIQVDR----GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDC 241
S FC +LTGI Q V V EAL ++L G+ + ++ VVT +WD
Sbjct: 110 SRFCTELTGITQDMVSGRDPFPVVYCEAL----QFLAEAGLGDAPPMRSYCVVTCGDWDL 165
Query: 242 RVMLESECRFK-KIWKPPYFNRWINLKVPFHEVFGGVR------------CNLKEAVEMA 288
+ ML ++ R + P F RW NLK ++ G + + ++M
Sbjct: 166 KTMLPAQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQML 225
Query: 289 GLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
GL QGR H G+DD +N +L L+ RG +T S
Sbjct: 226 GLPLQGRHHSGIDDCRNLTAVLCALLRRGLVIDVTFS 262
>gi|198414320|ref|XP_002130965.1| PREDICTED: similar to three prime histone mRNA exonuclease 1 [Ciona
intestinalis]
Length = 322
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 8/217 (3%)
Query: 133 QEFQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
Q + Y VV+D+EATC++ +NP Y EIIEFP+V++ + + + F +Y +P N LS
Sbjct: 85 QHYPYLVVLDYEATCEQ-QNPQDYLHEIIEFPAVLIDTTSTERVDVFHSYCKPALNPQLS 143
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESEC 249
+FC LTGIQQ VD + + W++ + A VT WD L +C
Sbjct: 144 EFCTSLTGIQQSDVDSAPDFTTVFNNFETWMKKHDLFAPRKCAFVTDGPWDFSRFLNIQC 203
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+I P + +WINLK + + + + + + GL ++GR HCG+DDA N +R+
Sbjct: 204 CLSEIKYPRWAKKWINLKKVYGNFYKLKKPKMMDMLSNIGLEFEGRHHCGMDDATNLSRI 263
Query: 310 LALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFL 346
+ ++ G F L N G L E+ L
Sbjct: 264 VQRMLDDGAIFQFNERL----NSGKLEVISEKEKALL 296
>gi|268554023|ref|XP_002634999.1| C. briggsae CBR-ERI-1 protein [Caenorhabditis briggsae]
Length = 578
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 100/201 (49%), Gaps = 7/201 (3%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y + IDFE TC + YP EIIE P+V++ ++ + F++YVRP N LSDFC
Sbjct: 139 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRSYVRPVKNPKLSDFCI 198
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFK 252
T I Q VD EAL + +W+ G+ KNT FA VT D ++ +C
Sbjct: 199 QFTKIAQETVDEAPYFREALEKLMQWMRKFGLGEKNTRFAFVTDGPHDMWKFMQFQCILS 258
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
I P F +IN+K F E F G+ + ++ +E L + G H GLDDA+N A
Sbjct: 259 NIRMPHMFRNFINIKKTFKEKFNGLMKGNGKSGIENMLERLDLTFIGNKHSGLDDARNIA 318
Query: 308 RLLALLMHRGFKFSITNSLMW 328
++ +M + I W
Sbjct: 319 QIAIQMMKLKIELRINQKCSW 339
>gi|25148199|ref|NP_741292.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
gi|45476772|sp|O44406.2|ERI1_CAEEL RecName: Full=3'-5' exonuclease eri-1; AltName: Full=Enhanced RNAi
protein
gi|351064943|emb|CCD73976.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
Length = 582
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y + IDFE TC + YP EIIE P+V++ ++ + F+TYVRP N LS+FC
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCM 207
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
T I Q VD EAL R W+ N G KN+ FA VT D ++ +C
Sbjct: 208 QFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLS 267
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
I P F +IN+K F E F G+ + ++ +E L++ G H GLDDA N A
Sbjct: 268 NIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIA 327
Query: 308 RLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDGSEAWTKTR 367
+ +M + I ++ N S +L ++D + R
Sbjct: 328 AIAIQMMKLKIELRINQKCSYKENQRSAARKD-------EERELEDAANVDLTSVDISRR 380
Query: 368 ECFLWVWKL 376
+ LW+ +L
Sbjct: 381 DFQLWMRRL 389
>gi|25148196|ref|NP_741293.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
gi|351064942|emb|CCD73975.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
Length = 448
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y + IDFE TC + YP EIIE P+V++ ++ + F+TYVRP N LS+FC
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCM 207
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
T I Q VD EAL R W+ N G KN+ FA VT D ++ +C
Sbjct: 208 QFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLS 267
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
I P F +IN+K F E F G+ + ++ +E L++ G H GLDDA N A
Sbjct: 268 NIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIA 327
Query: 308 RLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDGSEAWTKTR 367
+ +M + I ++ N S +L ++D + R
Sbjct: 328 AIAIQMMKLKIELRINQKCSYKENQRSAARKD-------EERELEDAANVDLTSVDISRR 380
Query: 368 ECFLWVWKL 376
+ LW+ +L
Sbjct: 381 DFQLWMRRL 389
>gi|71407241|ref|XP_806103.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70869745|gb|EAN84252.1| exonuclease, putative [Trypanosoma cruzi]
Length = 289
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 41/235 (17%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRPT N L+ FC
Sbjct: 2 FSHLLVCDFEATCDSASVAYPLEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTSFCT 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLE------------------NKGIKNTN------ 230
LTGI Q QVD L E L D WL NK +K +
Sbjct: 62 ALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVY 121
Query: 231 --------------FAVVTWSNWDCRVMLESECRFKKIWK--PPYFNRWINLKVPFHEVF 274
+VT WD R + EC + PP F RW+N++ F E F
Sbjct: 122 DETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFAEHF 180
Query: 275 GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
L + + GL++ G H G+DD++N AR++ L+ RG++ +++ ++
Sbjct: 181 RMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVHHVSTINYE 235
>gi|389601394|ref|XP_001565349.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505025|emb|CAM42259.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 575
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
PQ F ++V+D EATC+ + E+IEFP V+V T A FQ YVRP N +L
Sbjct: 44 IAPQPFDAYIVLDLEATCEAGRRITDAEVIEFPMVLVDPRTATQVAEFQRYVRPVKNPML 103
Query: 190 SDFCKDLTGIQQIQVDR----GVTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDC 241
S FC +LTGI Q V V EAL ++L G+ + ++ VVT +WD
Sbjct: 104 SRFCTELTGITQNMVSHRDPFPVVYCEAL----QFLAEAGLGDAPPLRSYCVVTCGDWDL 159
Query: 242 RVMLESECRFK-KIWKPPYFNRWINLKVPFHEVF---GGVR---CNLKEAVEMAGLAWQG 294
+ ML S+ R + P F RW NLK + GG R ++ + + + GL QG
Sbjct: 160 KTMLPSQIRISGQQGTPLSFQRWCNLKKYMSGLGLRDGGERGGPTDMPDMLRILGLPHQG 219
Query: 295 RAHCGLDDAKNTARLLALLMHRGFKFSIT 323
R H G+DD +N A +L L+ RG T
Sbjct: 220 RHHSGIDDCRNIAAVLCALLKRGLVVDTT 248
>gi|401422814|ref|XP_003875894.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492134|emb|CBZ27408.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 584
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 117/241 (48%), Gaps = 35/241 (14%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F +VV+DFEATC+ D+ E+IEFP V+V + T A FQ YVRP N +LS F
Sbjct: 53 QPFDAYVVLDFEATCEADRRIADAEVIEFPMVLVDARTATPVAEFQRYVRPVKNPVLSRF 112
Query: 193 CKDLTGIQQIQVDRG-----VTLSEALLRHDKWLENKGIKNT----NFAVVTWSNWDCRV 243
C +LTGI Q V RG + EAL ++L G+ + ++ VVT +WD +
Sbjct: 113 CTELTGITQDMV-RGRDPFPMVYCEAL----QFLAEAGLGDAPPMRSYCVVTCGDWDLKT 167
Query: 244 MLESECRFK-KIWKPPYFNRWINLKVPFHEVFGGVRCN------------LKEAVEMAGL 290
ML ++ R + P F RW NLK ++ G + + ++M GL
Sbjct: 168 MLPAQLRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGGGGPAPPLGLSWIPDMLQMVGL 227
Query: 291 AWQGRAHCGLDDAKNTARLLALLMHRGF----KFSITNSLMWQTNDGSLTWNQFPERIFL 346
QGR H G+DD +N A +L L+ RG FS T L W T Q P L
Sbjct: 228 PMQGRHHSGIDDCRNLAAVLCALLRRGLVIDVTFSSTPFLRWHAP----TEAQLPALDAL 283
Query: 347 P 347
P
Sbjct: 284 P 284
>gi|428181691|gb|EKX50554.1| hypothetical protein GUITHDRAFT_103781 [Guillardia theta CCMP2712]
Length = 656
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 110/224 (49%), Gaps = 59/224 (26%)
Query: 123 TPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVR 182
PA P+D Y VV+DFE TCD K P EIIEFPSV+V +T
Sbjct: 21 APARPFD-------YLVVLDFEWTCDNKKKLEPLEIIEFPSVLV-----------RTSFP 62
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI------KNTNFAVVTW 236
P +++S+F Q VD GV L +A+ H +WLE G+ ++ F VTW
Sbjct: 63 P---KIVSEF--------QEMVDAGVHLEDAIEMHRQWLEQHGLLPAEGAASSTFTFVTW 111
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--------------------HEVFGG 276
S+ D L SE KI +P YFN WINLKV + GG
Sbjct: 112 SDADIMFALHSEFSRLKIARPSYFNNWINLKVSLPSLPHSLLSRQQLLYKSHFKKDAVGG 171
Query: 277 VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
L+ VE G+++QGRAH GL D++NTA ++ +++ GF+F
Sbjct: 172 ----LQACVERLGISFQGRAHSGLVDSRNTAAIVMKMLNEGFQF 211
>gi|339249059|ref|XP_003373517.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970336|gb|EFV54297.1| conserved hypothetical protein [Trichinella spiralis]
Length = 747
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ +V+DFEATCD+ PQEIIEFP V S ++ + F +YVRP + LS FC
Sbjct: 551 LENLLVLDFEATCDQPIQIEPQEIIEFPCVNFSLKEDRIVSQFHSYVRPEVHPNLSSFCT 610
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI----KNTNFAVVTWSNWDCRVMLESECR 250
+LTGI Q V+ TL+E L + D WL + + + + +VT +WD L ++C+
Sbjct: 611 NLTGIVQDMVNNQPTLTEVLTQFDGWLAEQQLLTDEQRDKWTMVTCGSWDLNYQLRNQCK 670
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P YF WIN+K G +L ++ G+ +GR H G+DD KN R +
Sbjct: 671 WMGHPVPLYFKSWINIKKIACNATGNYPKSLIAMMQSLGVEHEGRLHSGIDDVKNIVRTV 730
Query: 311 ALLMHRGFKFSITNS 325
L R F +T+S
Sbjct: 731 QELKRRKQPFYVTDS 745
>gi|328768674|gb|EGF78720.1| hypothetical protein BATDEDRAFT_32150, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 265
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
FQP ++ ++V D EATCD D + E+IEFP + + T + + F+ Y RP +
Sbjct: 75 FQP--YRIYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRPILHPT 132
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNFAV--VTWSNWDC 241
L+DFCK TGI Q Q D + +W+ G+ V VT WD
Sbjct: 133 LTDFCKQFTGITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDL 192
Query: 242 RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
R LE E + I +P + + IN++ + E++G + NL ++ G+ ++GR HCG D
Sbjct: 193 RDFLEKEFIYSNIQRPDFMRKIINIRSLYTELYGKEKTNLDGMLKGLGMVFEGREHCGFD 252
Query: 302 DAKNTARLL 310
DA N AR+L
Sbjct: 253 DASNVARIL 261
>gi|350412671|ref|XP_003489724.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus impatiens]
Length = 618
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 3/195 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +V+DFE TC K + PQEIIEFP VS+ + ++E F Y++P + L+ F
Sbjct: 411 QPFNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKPKYHPQLTPF 470
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTN-FAVVTWSNWDCRVMLESECR 250
C +LTGI Q VD E WL E+K K+ N A VT +WD + ML S+C
Sbjct: 471 CTELTGIIQDLVDNQPYFPEVFGTFCNWLEEHKYFKDGNDSAFVTCGDWDLKFMLPSQCE 530
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ I P F +WINLK F + NL + + L G+ H G+ D +N +++
Sbjct: 531 LENISLPKQFMKWINLKGSFCDAVDHYPRNLTDMLLHLKLPLIGKLHSGMSDVENMVQII 590
Query: 311 ALLMHR-GFKFSITN 324
L R +F I N
Sbjct: 591 QALQSRHNVQFKINN 605
>gi|324520531|gb|ADY47658.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F YF+V+DFEATC+++ P QEIIEFP V + T Q A F YV PT +L+
Sbjct: 64 QYFDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPVLTS 123
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--------NFAVVTWSNWDCRV 243
FC +LTGI Q VD + L + L + +WL + + + ++ VT +WD
Sbjct: 124 FCTNLTGIVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGDWDLGT 183
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+L E F+ + PPYF WINLK + G +L + + GR H G+DD
Sbjct: 184 ILPQEASFRGLHLPPYFGSWINLKKAYRNAKGYFPNSLMVMLNDLQIPHTGRLHSGIDDV 243
Query: 304 KNTARLLALLMHRGFKFSITNSL 326
N ++ L G+ T+ L
Sbjct: 244 INICAIVRKLCEDGYLLENTSYL 266
>gi|324519006|gb|ADY47259.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F YF+V+DFEATC+++ P QEIIEFP V + T Q A F YV PT +L+
Sbjct: 64 QYFDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPVLTS 123
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--------NFAVVTWSNWDCRV 243
FC +LTGI Q VD + L + L + +WL + + + ++ VT +WD
Sbjct: 124 FCTNLTGIVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGDWDLGT 183
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+L E F+ + PPYF WINLK + G +L + + GR H G+DD
Sbjct: 184 ILPQEASFRGLHLPPYFGSWINLKKAYRNAKGYFPNSLMVMLNDLQIPHTGRLHSGIDDV 243
Query: 304 KNTARLLALLMHRGFKFSITNSL 326
N ++ L G+ T+ L
Sbjct: 244 INICAIVRKLCEDGYLLENTSYL 266
>gi|324515366|gb|ADY46181.1| 3'-5' exonuclease eri-1 [Ascaris suum]
Length = 402
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 10/243 (4%)
Query: 92 KVHHCQMNSFESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQEF-QYFVVIDFEATCDKD 150
K+ H SQ F ++ + +L A P + + + +YFVV+DFE TC+ +
Sbjct: 105 KLVHIDSRGKRSQL--FERLKKYYRKEFAILKNAEPMRNRTERYYEYFVVMDFECTCEDE 162
Query: 151 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTL 210
Y EIIEFP+V++ ++ F ++VRP N LS+FC LTG+ Q VD +
Sbjct: 163 VYEYEHEIIEFPAVLIDVRNRRIVDTFHSHVRPRINPKLSEFCSRLTGVTQEMVDNALPF 222
Query: 211 SEALLRHDKWLENK--GIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPY-FNRWINLK 267
+ W+++ G N +A VT WD + +C + P+ F +IN++
Sbjct: 223 VDVFDSFRMWMQSHRLGHNNARYAFVTDGPWDIAKFFQMQCLQSGLGSVPHDFRHYINIR 282
Query: 268 VPFHEVF----GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
F + + NL + G+ ++GR HCGLDD+KN AR++ ++ + I
Sbjct: 283 KAFLNKYLKGHHAQKTNLSGMLSELGMTFEGREHCGLDDSKNIARIVIRMLEDRSELRIN 342
Query: 324 NSL 326
+
Sbjct: 343 ERI 345
>gi|239793055|dbj|BAH72791.1| ACYPI010006 [Acyrthosiphon pisum]
Length = 340
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 12/193 (6%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
F YFVVID EATC ++ NP Y EIIEFP+V+V + ++ FQ +V+P+ N LS+F
Sbjct: 92 FPYFVVIDIEATCTEN-NPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPSINPKLSEF 150
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENK--GIKNTNFAVVTWSNWDCRVMLESECR 250
C LTGI Q Q+D + L R KWLE GIK+ F++VT L +C
Sbjct: 151 CIKLTGITQDQIDNADSFEVCLTRFTKWLEEHELGIKH-KFSIVTDGPLIWLRFLYGQCL 209
Query: 251 FKKIWKPPYFNRWINLKVPF------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+I P + +WIN++ F +V V CNL + + ++G H GLDD+
Sbjct: 210 MSEIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEFEGNPHSGLDDSF 269
Query: 305 NTARLLALLMHRG 317
N +R+ L+ G
Sbjct: 270 NISRICIRLLEDG 282
>gi|355686536|gb|AER98088.1| exoribonuclease 3 [Mustela putorius furo]
Length = 176
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
Query: 154 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA 213
+PQEIIEFP + ++ T ++E+ F YV+P + L+ FC +LTGI Q VD +L +
Sbjct: 1 HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQV 60
Query: 214 LLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFH 271
L R D+W+ +G+ + N VT +WD +VML +C++ + YF +WINLK +
Sbjct: 61 LERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS 120
Query: 272 EVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
G + L + + L GR H G+DD KN A ++ L ++GF F T+
Sbjct: 121 FAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYQGFIFKQTSK 175
>gi|340052994|emb|CCC47280.1| putative exonuclease [Trypanosoma vivax Y486]
Length = 381
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 36/232 (15%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATCD+ ++ +P EIIEFP V+V + + A F +YVRP + L+ F
Sbjct: 109 QPFSHILVCDFEATCDESRHHFPHEIIEFPVVVVDTARLCVVAEFHSYVRPVHHPKLTPF 168
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVTW--- 236
C +LTGI Q QVD TL L R + WL ++ ++N V +
Sbjct: 169 CIELTGITQAQVDEAPTLPVVLGRFNDWLRRVVYPLCREWKVNSRELRNDLPGVGRFVYD 228
Query: 237 ----SNW-DCRVML----ESECRFKKIWK-----------PPYFNRWINLKVPFHEVFGG 276
W DC M+ + + +K PP F RWI+++ F + F
Sbjct: 229 NEHNPEWVDCERMVCFATDGQSDMRKFMHACSVVRDGHVFPPLFYRWIDVRACFCQHFRY 288
Query: 277 VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
+ + ++ G +++GR H G+DD++N AR+L LM RG+K + + +
Sbjct: 289 RPRKITDMLKRLGRSFRGRQHSGIDDSRNIARILMELMRRGYKIKHVDKIAY 340
>gi|196009752|ref|XP_002114741.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
gi|190582803|gb|EDV22875.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
Length = 276
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 137 YFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y+ VIDFEATC+ + NP Y EIIEFP+++V++ T +E+ F Y RP N LS FC
Sbjct: 80 YYCVIDFEATCE-EVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRPVMNPKLSSFCT 138
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LTGI Q +D KWLE+ + + F VVT +D L +C+ KI
Sbjct: 139 KLTGIDQKTIDSADAFKVVFQNFQKWLED-VLGESTFVVVTDGPFDITRFLTIQCKVDKI 197
Query: 255 WKPPYFNRWINLK---VPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
P + + W NLK F+++ G L++ + + GR H G+DDAKN A++L
Sbjct: 198 PMPYWASNWTNLKRTFKAFYKLSGQRFPTLQDMLGALKIPHDGRLHSGIDDAKNIAKILC 257
Query: 312 LLMHRG 317
L+ G
Sbjct: 258 QLIRDG 263
>gi|256076258|ref|XP_002574430.1| 3'-5' exonuclease [Schistosoma mansoni]
Length = 576
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 78 HDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQEFQY 137
HD +SQ +++C+ + + + Q P +LTP YD Y
Sbjct: 243 HDSTVLGEVNLNSQIINNCRNDRHRLRNPSVTTTTKLQ-KPV-ILTPDTFYD-------Y 293
Query: 138 FVVIDFEATCDKDKN-----PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++ID EATC+ + YP EIIEFP ++ S+ + + F Y +P + LS+F
Sbjct: 294 LLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPRLHPDLSEF 353
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
C DLT IQQIQVD LL+ ++WL + + N A+V + D + +CR
Sbjct: 354 CTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLANKRCAIVCDCSADMSKFMRIQCRL 413
Query: 252 KKIWKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I P + N WINL F + R L + GL++ G+ H GLDDA N R
Sbjct: 414 SNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGLSFVGQRHRGLDDAINILR 473
Query: 309 LLALLMHRGFKFSI 322
++ +L+ G +
Sbjct: 474 IVRVLLSDGCSLRV 487
>gi|392571225|gb|EIW64397.1| exonuclease RNase T and DNA polymerase III [Trametes versicolor
FP-101664 SS1]
Length = 215
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
+Y +V+DFEATCD P+ E+IEFP+++ ++EA F YVRPT + L+
Sbjct: 4 LRYLLVLDFEATCDNTNRIVPRQEMEVIEFPTILYDIEQDKVEAVFHEYVRPTLHPTLTP 63
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV--TWSNWDCRVMLESEC 249
FC DLTGIQQ VD + R+ ++L G+ ++ + + T +WD + ML +
Sbjct: 64 FCTDLTGIQQATVDSAAPFPDVWERYQEFLRTHGVVDSPSSAIYLTCGDWDLKTMLPMQL 123
Query: 250 RFKKIWK----------PPYFNRWINLKVPFHEVFGGVRC--NLKEAVEMAGLAWQGRAH 297
R K+ + PY +RWIN+K + F ++ + + A + +GR H
Sbjct: 124 RLSKLLESSSTPSGTLVAPY-DRWINIKNSYRR-FHDLKYPKGMASMLTHAKMELEGRHH 181
Query: 298 CGLDDAKNTARLLALLMHRGFK 319
G+DD KN RL+ + G+K
Sbjct: 182 SGIDDCKNILRLVQRMRQDGWK 203
>gi|360043282|emb|CCD78695.1| putative 3-5 exonuclease eri1 [Schistosoma mansoni]
Length = 562
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 78 HDFGSWSTFYPDSQKVHHCQMNSFESQFYPFPVENRFQFAPYNMLTPAHPYDFQPQEFQY 137
HD +SQ +++C+ + + + Q P +LTP YD Y
Sbjct: 243 HDSTVLGEVNLNSQIINNCRNDRHRLRNPSVTTTTKLQ-KPV-ILTPDTFYD-------Y 293
Query: 138 FVVIDFEATCDKDKN-----PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++ID EATC+ + YP EIIEFP ++ S+ + + F Y +P + LS+F
Sbjct: 294 LLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPRLHPDLSEF 353
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
C DLT IQQIQVD LL+ ++WL + + N A+V + D + +CR
Sbjct: 354 CTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLANKRCAIVCDCSADMSKFMRIQCRL 413
Query: 252 KKIWKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I P + N WINL F + R L + GL++ G+ H GLDDA N R
Sbjct: 414 SNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGLSFVGQRHRGLDDAINILR 473
Query: 309 LLALLMHRGFKFSI 322
++ +L+ G +
Sbjct: 474 IVRVLLSDGCSLRV 487
>gi|389593759|ref|XP_003722128.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438626|emb|CBZ12385.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 880
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
P P ++Y +V+DFEATC++ P Y EIIEFP V+V + ++ A F +VRP
Sbjct: 621 PLGALPCPYEYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRY 680
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VM 244
+ LS FCK LTG++Q VD +L E + + ++WL + + VT D R M
Sbjct: 681 KRELSSFCKKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFM 740
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ I P F ++I++K F F + +K +E+ L ++GR H GLDDA+
Sbjct: 741 YYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVMHLPFEGRLHSGLDDAR 800
Query: 305 NTARLLALLMHRGFKF 320
N A ++ L+H G F
Sbjct: 801 NIASIVIGLLHHGCSF 816
>gi|312092765|ref|XP_003147452.1| exonuclease [Loa loa]
Length = 401
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ YFVVIDFE TC+ D Y EIIEFP+++V ++ F +YVRP N LS+FC
Sbjct: 147 YDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKKEIVDVFHSYVRPLANPQLSEFCS 206
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKW--LENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
TGI Q VD+ + + L W L + G K +A VT WD + +C
Sbjct: 207 AFTGITQEMVDKALPFIDVLDSFRAWMQLHHLGQKEVRYAFVTDGPWDIAKFFQMQCIQS 266
Query: 253 KIWKPPY-FNRWINLKVPFHEVF----GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
K+ P+ F ++N++ F + + NL + + ++GR H GLDD+KN A
Sbjct: 267 KLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRMLTSLNMKFEGREHSGLDDSKNIA 326
Query: 308 RLLALLMHRGFKFSITNSLMWQTNDG 333
+++ ++ + + L+ + DG
Sbjct: 327 KIVIRMLGDKSELRVNEKLV-RIKDG 351
>gi|393911376|gb|EFO16618.2| exonuclease [Loa loa]
Length = 388
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 12/229 (5%)
Query: 113 RFQFAPYNMLTPAHPYDFQPQEF-QYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTG 171
R +FA ++ A P + + F YFVVIDFE TC+ D Y EIIEFP+++V
Sbjct: 114 RKEFA---IIKNAEPLRNKTETFYDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKK 170
Query: 172 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNT 229
++ F +YVRP N LS+FC TGI Q VD+ + + L W++ + G K
Sbjct: 171 EIVDVFHSYVRPLANPQLSEFCSAFTGITQEMVDKALPFIDVLDSFRAWMQLHHLGQKEV 230
Query: 230 NFAVVTWSNWDCRVMLESECRFKKIWKPPY-FNRWINLKVPFHEVF----GGVRCNLKEA 284
+A VT WD + +C K+ P+ F ++N++ F + + NL
Sbjct: 231 RYAFVTDGPWDIAKFFQMQCIQSKLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRM 290
Query: 285 VEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDG 333
+ + ++GR H GLDD+KN A+++ ++ + + L+ + DG
Sbjct: 291 LTSLNMKFEGREHSGLDDSKNIAKIVIRMLGDKSELRVNEKLV-RIKDG 338
>gi|340052991|emb|CCC47277.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 434
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA--CFQTYVRPT 184
P Q F + +V+D EATC++ + YP EIIE P V+V G ++ F++YVRP
Sbjct: 112 PNPLDRQIFDFLIVVDVEATCERKNDNYPHEIIELPGVLVDVRRGVIDKGRSFRSYVRPI 171
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-V 243
N +L+DFCK LTGI Q VD L + + ++W T WD +
Sbjct: 172 INPILTDFCKSLTGITQENVDGAPVLQDVVKLFEEWYRRTIPAGAKVVFATDGPWDLKNF 231
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDD 302
+ E + P F +++++ F F G L++ + L ++GR H G DD
Sbjct: 232 VYEHSIMRDHVRFPSIFYEYVDIRTTFANYFNKGKLIKLEDMLHRMNLQFEGRPHSGFDD 291
Query: 303 AKNTARLLALLMHRG--------------FKFSITNSLMWQTNDGSLTWN 338
+ N ARL +M G F +S+ +++ +GS T +
Sbjct: 292 SVNIARLALSMMKAGCVFNYLVSIPLTDKFYYSLEGVPLYRREEGSGTLD 341
>gi|307104722|gb|EFN52974.1| hypothetical protein CHLNCDRAFT_26251 [Chlorella variabilis]
Length = 194
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 13/164 (7%)
Query: 157 EIIEFPSVIVSSV-TGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALL 215
EIIE V+V + T L FQ YVRP + LSDFC +LTGI Q VD GV L AL
Sbjct: 1 EIIELSCVVVDTARTTVLPVHFQRYVRPDQHPCLSDFCTELTGITQAMVDGGVPLHTALQ 60
Query: 216 RHDKWLENKGI-----------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWI 264
D WL +G+ + TW +WD +V ++ EC++++I +P + RWI
Sbjct: 61 DLDAWLRQQGLIGQVGGRCCSSRRCFSCCSTWRDWDLKVQMQMECKWRRIEQPRWQKRWI 120
Query: 265 NLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
++ + + G + NL+ + E A L W GRAH +DDA+NTAR
Sbjct: 121 DIGAVWFK-HSGKKGNLRASCEAAELGWDGRAHSAIDDARNTAR 163
>gi|389602001|ref|XP_001566397.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505274|emb|CAM39905.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 881
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDK-DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
P P ++Y +V+DFEATC++ + Y EIIEFP V+V ++ A F +VRP
Sbjct: 622 PLGALPCPYEYLLVLDFEATCEEHPPHNYLHEIIEFPVVVVDVRLQRVVAEFHRFVRPRY 681
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VM 244
+ LS FCK LTG++Q VD +L E +L+ ++W + ++ T D R M
Sbjct: 682 KRELSSFCKRLTGMRQEDVDTAASLEEVILQFERWFSHTLPQHARCVFATDGPMDLREFM 741
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ I PP F ++I++K F F + +K +E L ++GR H GLDDA+
Sbjct: 742 YHHSVSRQGIRFPPLFYQFIDVKQTFACFFQCSQGKIKAMLEALHLPFEGRLHSGLDDAR 801
Query: 305 NTARLLALLMHRGFKF 320
N A ++ L+H G F
Sbjct: 802 NIASIVIGLLHYGCTF 817
>gi|298711928|emb|CBJ48615.1| phosphotransferase [Ectocarpus siliculosus]
Length = 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 155 PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEAL 214
P E+IEFP+V++ + + ++ F+ YVRP + +L+ FC LTGI+Q VD GV EAL
Sbjct: 333 PMEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPILTPFCTSLTGIEQSTVDGGVLFEEAL 392
Query: 215 LRHDKWLENKGI---KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFH 271
+H ++L + + VT NWD + M+ ++C+ PP+FN W N+K F
Sbjct: 393 SQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFR 452
Query: 272 EVF------------GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK 319
+V GG + + GL +GR H GLDD +N AR +A+ + R +
Sbjct: 453 DVMYRAARQSQRRPRGGKVGGMPAMLSALGLVLEGRHHSGLDDCRNIAR-IAIELCRRSR 511
Query: 320 FSITNSLMWQTNDG 333
I + W T G
Sbjct: 512 RQIQATAPWNTAAG 525
>gi|401416022|ref|XP_003872506.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488730|emb|CBZ23977.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 126 HPYD----FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQT 179
H YD Q F Y +V+D EATC+++ YP E+IE P V++ TGQ++ F T
Sbjct: 60 HTYDDTDPLDQQLFDYIIVVDVEATCEQNARSYPHEVIEIPGVLIDVRTGQVDRARSFHT 119
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW 239
+V+P N L+ FC LTGI Q+ VD +++EA+ +KW + W
Sbjct: 120 FVKPWRNPRLTPFCTQLTGITQVVVDAAPSITEAIQLFEKWYRETIPRGAKTIFAADGPW 179
Query: 240 DCRVML-ESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAH 297
D + + E + P F +++++ F H + GV L + L + GR H
Sbjct: 180 DFKNFIHEHHILRDHVSFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMNLRFDGRPH 239
Query: 298 CGLDDAKNTARLLALLMHRG 317
G DDA N ARL +M G
Sbjct: 240 NGFDDAYNIARLAVAMMKAG 259
>gi|407410781|gb|EKF33094.1| hypothetical protein MOQ_003041 [Trypanosoma cruzi marinkellei]
Length = 379
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 117 APY-NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 175
APY ++ A P D Q F Y +V+D EATC+ + YP EIIE P V++ G ++
Sbjct: 50 APYVSIYDEADPLD--RQLFDYIIVVDVEATCESNNENYPHEIIELPGVLIDVRRGIVDK 107
Query: 176 --CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
F++YV+P N +LS+FCK LTGI Q VD L E + ++W A
Sbjct: 108 RHSFRSYVKPWRNPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAF 167
Query: 234 VTWSNWDCRVMLESECRFKK-IWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLA 291
WD + + + + P F +++++ F H G L + L
Sbjct: 168 AADGPWDFKNFIHEHSILRDHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLR 227
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRG--FKFSIT 323
++GR HCG DDA N ARL +M G F F I
Sbjct: 228 FEGRPHCGFDDAVNIARLAVAMMREGCIFDFLIV 261
>gi|342180403|emb|CCC89880.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 760
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 120 NMLTPAHPYDFQPQE-----FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQL 173
N ++P Y +P F Y +V+DFEATC+++ P Y EIIEFP V+V ++
Sbjct: 529 NAISPGSSYVGRPMPHLPCPFDYILVVDFEATCEENAPPSYLHEIIEFPVVVVDVKLQRV 588
Query: 174 EACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
F YVRP LSDFC+ LTGIQQ +D L + + + ++W + +
Sbjct: 589 ITEFHRYVRPKFKSQLSDFCRALTGIQQDDIDSASLLEDVIKQFERWYAQTIPPGSRVVL 648
Query: 234 VTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 292
T D R M + I P F +WI++K F F + +K +E+ +
Sbjct: 649 ATDGPADMREFMYVHSVTRQGIRFPNLFYQWIDVKQIFAHFFQCQQGKIKAMLEVLHCPF 708
Query: 293 QGRAHCGLDDAKNTARLLALLMHRGFKF 320
+GR H G+DDA+N A+++ ++ G F
Sbjct: 709 EGRLHSGIDDARNIAKIVIRMLEVGCSF 736
>gi|398018617|ref|XP_003862473.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500703|emb|CBZ35780.1| hypothetical protein, conserved [Leishmania donovani]
Length = 880
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
P+ P + Y +V+DFEATC++ P Y EIIEFP V+V + ++ A F +VRP
Sbjct: 621 PFGALPCPYDYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRY 680
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VM 244
+ LS FC+ LTG++Q VD +L E + + ++WL + + VT D R M
Sbjct: 681 KRELSPFCQKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFM 740
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ I P F ++I++K F F + +K +E+ L ++GR H GLDDA+
Sbjct: 741 YYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDAR 800
Query: 305 NTARLLALLMHRGFKF 320
N A ++ L+H G F
Sbjct: 801 NIASIVIGLLHYGCSF 816
>gi|146092929|ref|XP_001466576.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070939|emb|CAM69615.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 880
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
P+ P + Y +V+DFEATC++ P Y EIIEFP V+V + ++ A F +VRP
Sbjct: 621 PFGALPCPYDYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRY 680
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VM 244
+ LS FC+ LTG++Q VD +L E + + ++WL + + VT D R M
Sbjct: 681 KRELSPFCQKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFM 740
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ I P F ++I++K F F + +K +E+ L ++GR H GLDDA+
Sbjct: 741 YYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDAR 800
Query: 305 NTARLLALLMHRGFKF 320
N A ++ L+H G F
Sbjct: 801 NIASIVIGLLHYGCSF 816
>gi|402588418|gb|EJW82351.1| exonuclease [Wuchereria bancrofti]
Length = 384
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ YFVVIDFE TC+ D Y EIIEFP+V+V F +YVRP N LS+FC
Sbjct: 134 YDYFVVIDFECTCEADLYDYNHEIIEFPAVLVDV------DVFHSYVRPLANPQLSEFCS 187
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKW--LENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
TGI Q VD+ + + L W L G K+ +A VT WD + +C
Sbjct: 188 VFTGITQEMVDKALPFIDVLDSFRTWMQLHRLGQKDVRYAFVTDGPWDIAKFFQMQCIQS 247
Query: 253 KIWKPPY-FNRWINLKVPFHEVF----GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
K+ P+ F +IN++ F + + NL + + ++GR H GLDD+KN A
Sbjct: 248 KLNAVPHDFRFYINIRRSFANKYCKKHSMQKINLGGMLTFLNMKFEGREHSGLDDSKNIA 307
Query: 308 RLLALLMHRGFKFSITNSLM 327
R++ ++ + + L+
Sbjct: 308 RIVIKMLEDRSELRVNEKLV 327
>gi|402224358|gb|EJU04421.1| exonuclease RNase T and DNA polymerase III [Dacryopinax sp. DJM-731
SS1]
Length = 212
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYP----QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
P +YF+++DFEATC +P P QE+IEFP ++ S A F YV+P +
Sbjct: 9 PPPLKYFLILDFEATC---ASPRPVNFVQEVIEFPCIVYSMEQEYPTAMFHEYVKPLLSP 65
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN--KGIKNTNFAVVTWSNWDCRVML 245
L+DFC LTGI Q VD G S R ++WL + +F VT NWD + ML
Sbjct: 66 HLTDFCTRLTGISQATVDSGDKFSNVWRRFNEWLARLCQDTDPRSFIFVTCGNWDLQTML 125
Query: 246 ESECRFKKIWKPPY--------FNRWINLKVPFHEVF-GGVRCNLKEAVEMAGLAWQGRA 296
++ R I P F R++N+K F E + L E + + G+ +GR
Sbjct: 126 PAQLRQCGIEFPRRETGHTGVDFTRYVNIKDAFAEFYDSDPPSGLLEMLHVLGMQLEGRF 185
Query: 297 HCGLDDAKNTARLLALLMHRGFKF 320
H G+DD +N +R++ + G+K
Sbjct: 186 HSGIDDCRNVSRIIEQMRRDGWKI 209
>gi|154340904|ref|XP_001566405.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063728|emb|CAM39913.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 405
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 126 HPYD----FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQT 179
H YD Q F Y +V+D EATC++ YP E+IE P V++ TGQ++ F T
Sbjct: 60 HTYDDTDPLDQQLFDYIIVVDVEATCEQHNRNYPHEVIEIPGVLIDVRTGQVDRARSFHT 119
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW 239
YV+P N L+ FC LTGI Q VD +++EA+ +KW + W
Sbjct: 120 YVKPWRNPRLTPFCTQLTGITQEMVDAAPSITEAVQLFEKWYRETIPRGAKTIFAADGPW 179
Query: 240 DCRVML-ESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAH 297
D + + E + P F +++++ F H + GV L + L + GR H
Sbjct: 180 DFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMHLRFDGRPH 239
Query: 298 CGLDDAKNTARLLALLMHRG 317
G DDA N ARL +M G
Sbjct: 240 SGFDDAYNIARLTVAMMKVG 259
>gi|389751881|gb|EIM92954.1| exonuclease RNase T and DNA polymerase III [Stereum hirsutum
FP-91666 SS1]
Length = 220
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ + ++DFEATC+ + EIIEFP+++ + T +++A F YVRP L+DF
Sbjct: 11 KLTHLAILDFEATCELPSGSREEMEIIEFPTILYNLNTKRVQATFHEYVRPVIYPQLTDF 70
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECR 250
C DLTGI Q VD R+ +L+ +G+ ++ A VT +WD + ML +
Sbjct: 71 CLDLTGISQETVDAADRFPAVWTRYLAFLKAQGVWENSSALAFVTCGDWDLKTMLPQQLG 130
Query: 251 F--------KKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGL 300
K + F RWIN+K FH V+GG R L ++ + QGR H G+
Sbjct: 131 LSFADDATKKHETEHVLFKRWINIKRSFHSVYGGKRRPSGLISMLKALAITHQGRHHSGI 190
Query: 301 DDAKNTARLLALLMHRGFK 319
DD +N ++ + G+K
Sbjct: 191 DDCQNLLSIVERMREDGWK 209
>gi|242018695|ref|XP_002429809.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212514827|gb|EEB17071.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 237
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ Y +++DFEATCDK K + QEIIEFP + ++ T + E+ F YVRP N L++FC
Sbjct: 43 YDYLLILDFEATCDKKK--FEQEIIEFPCLKINMNTLREESRFHKYVRPVINPKLTNFCT 100
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+LTGI Q VD T +E L ++W +++G+ + N VT +WD M+ +C KI
Sbjct: 101 ELTGIIQEMVDDEPTFNEVYLLFEQWRKSEGLTDDNSIYVTSGDWDLGYMMPRQCAISKI 160
Query: 255 WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P + WI++K + + +L E + + + GR H G+ RL L
Sbjct: 161 QVPSHMMTWIDIKKLYGINYNCYCGSLIEIFRVFNIEFDGRNHSGI-----IKRLSKL-- 213
Query: 315 HRGFKFSITNSLMWQTN 331
KF+ T++L N
Sbjct: 214 --NIKFTPTSNLTLSKN 228
>gi|297298942|ref|XP_002805307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Macaca mulatta]
Length = 340
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 173 LEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NF 231
LE FQ YVRP N LSDFC LTGI Q QVDR T + L + W++ K + +
Sbjct: 157 LEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKY 216
Query: 232 AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAG 289
+++T +WD L +C+ ++ PP+ +WIN++ + + R K + E G
Sbjct: 217 SILTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLG 276
Query: 290 LAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ + GR HCGLDD+KN AR+ ++ G + I +
Sbjct: 277 MDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKI 313
>gi|146092931|ref|XP_001466577.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398018621|ref|XP_003862475.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070940|emb|CAM69616.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500705|emb|CBZ35782.1| hypothetical protein, conserved [Leishmania donovani]
Length = 405
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 126 HPYD----FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQT 179
H YD Q F Y +V+D EATC+++ YP E+IE P V++ TGQ++ F T
Sbjct: 60 HTYDDTDPLDQQLFDYIIVVDVEATCEQNSRNYPHEVIEIPGVLIDVRTGQVDRARSFHT 119
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW 239
+V+P N L+ FC LTGI Q VD +++EA+ +KW + W
Sbjct: 120 FVKPWRNSRLTPFCTQLTGITQEVVDAAPSITEAIQLFEKWYRETIPRGAKTIFAADGPW 179
Query: 240 DCRVML-ESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAH 297
D + + E + P F +++++ F H + GV L + L + GR H
Sbjct: 180 DFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHHLNHGVPIKLDAMLRKMNLRFDGRPH 239
Query: 298 CGLDDAKNTARLLALLMHRG 317
G DDA N ARL +M G
Sbjct: 240 NGFDDAYNIARLAVAMMKAG 259
>gi|226481595|emb|CAX73695.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 121 MLTPAHPYDFQPQEFQYFVVIDFEATCDKDKN-----PYPQEIIEFPSVIVSSVTGQLEA 175
+LTP YD Y ++ID EATC+ + YP EIIEFP ++ ++ + +
Sbjct: 291 ILTPDTFYD-------YLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVS 343
Query: 176 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVV 234
F Y +P + LS+FC DLT IQQIQVD + S LL+ ++WL + + A+V
Sbjct: 344 VFHAYCKPRLHPNLSEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQKRCAIV 403
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLA 291
D + +CR I P + WINL F + R L + GL+
Sbjct: 404 CDCCADMSKFMRIQCRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVTLNGMLHDLGLS 463
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
+ G+ H GLDDA N R++ +L+ G +
Sbjct: 464 FVGQRHRGLDDAVNILRIVRVLLSDGCSLRV 494
>gi|226481597|emb|CAX73696.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 121 MLTPAHPYDFQPQEFQYFVVIDFEATCDKDKN-----PYPQEIIEFPSVIVSSVTGQLEA 175
+LTP YD Y ++ID EATC+ + YP EIIEFP ++ ++ + +
Sbjct: 291 ILTPDTFYD-------YLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVS 343
Query: 176 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVV 234
F Y +P + LS+FC DLT IQQIQVD + S LL+ ++WL + + A+V
Sbjct: 344 VFHAYCKPRLHPNLSEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQKRCAIV 403
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLA 291
D + +CR I P + WINL F + R L + GL+
Sbjct: 404 CDCCADMSKFMRIQCRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVTLNGMLHDLGLS 463
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSI 322
+ G+ H GLDDA N R++ +L+ G +
Sbjct: 464 FVGQRHRGLDDAVNILRIVRVLLSDGCSLRV 494
>gi|71396663|ref|XP_802406.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70862768|gb|EAN80960.1| exonuclease, putative [Trypanosoma cruzi]
Length = 310
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
PQ F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRPT N L+
Sbjct: 89 PQIFSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTS 148
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------NKGIKNTN--- 230
FC LTGI Q QVD L E L D WL NK +K +
Sbjct: 149 FCTALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRR 208
Query: 231 -----------------FAVVTWSNWDCRVMLESECRFKKIWK--PPYFNRWINLKVPFH 271
+VT WD R + EC + PP F RW+N++ F
Sbjct: 209 FVYDETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFA 267
Query: 272 EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
E F L + + GL++ G H G+DD++ +L+
Sbjct: 268 EHFRMRPRKLNDMLRKLGLSFHGHPHSGIDDSRKYRPVLS 307
>gi|401416026|ref|XP_003872508.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488732|emb|CBZ23979.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 879
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
P P + Y +V+DFEATC++ P Y EIIEFP V+V ++ A F +VRP
Sbjct: 620 PLGALPCPYDYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDVRLQRVVAEFHRFVRPRY 679
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VM 244
+ LS FCK LTG++Q VD +L E + + ++WL + + VT D R M
Sbjct: 680 KRELSPFCKKLTGMRQEDVDAAASLEEVVRQFERWLSHTLPPHARCMFVTDGPMDLREFM 739
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ I P F ++I++K F F + +K +E+ L ++GR H GLDDA+
Sbjct: 740 YYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDAR 799
Query: 305 NTARLLALLMHRGFKF 320
N A ++ L+H G F
Sbjct: 800 NIASIVIGLLHYGCSF 815
>gi|71417705|ref|XP_810633.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875194|gb|EAN88782.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 117 APY-NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 175
PY ++ A P D Q F Y +V+D EATC+ + + Y EIIEFP V++ G ++
Sbjct: 65 VPYVSIYDEADPLD--RQLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDT 122
Query: 176 --CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
F++YV+P N +LS+FCK LTGI Q VD L E + ++W A
Sbjct: 123 RRSFRSYVKPWRNPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAF 182
Query: 234 VTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLA 291
WD + + E + P F +++++ F H G L + L
Sbjct: 183 AADGPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLR 242
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRG--FKFSIT 323
++GR HCG DDA N ARL +M G F F I
Sbjct: 243 FEGRPHCGFDDAVNIARLAVAMMRAGCIFDFLIV 276
>gi|71650409|ref|XP_813903.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878830|gb|EAN92052.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 117 APY-NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 175
PY ++ A P D Q F Y +V+D EATC+ + + Y EIIEFP V++ G ++
Sbjct: 65 VPYVSIYDEADPLD--RQLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDT 122
Query: 176 --CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
F++YV+P N +LS+FCK LTGI Q VD L E + ++W A
Sbjct: 123 RRSFRSYVKPWRNPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAF 182
Query: 234 VTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLA 291
WD + + E + P F +++++ F H G L + L
Sbjct: 183 AADGPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLR 242
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRG--FKFSIT 323
++GR HCG DDA N ARL +M G F F I
Sbjct: 243 FEGRPHCGFDDAVNIARLAVAMMRAGCIFDFLIV 276
>gi|342180404|emb|CCC89881.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 385
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 106/233 (45%), Gaps = 37/233 (15%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATCD YP EIIEFP V V + ++ A F +YVRP + LS F
Sbjct: 112 QPFSHLLVCDFEATCDDYNVDYPHEIIEFPVVCVDTQQLRVVAEFHSYVRPVKCKQLSFF 171
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWL-------------------------ENKGIK 227
CK+LTGI Q VD+ TL E + +WL E K +
Sbjct: 172 CKELTGITQSTVDKAPTLPEVIKLFGEWLRDVVYPMCRQQQHQQSSRPKCSPAAERKFVY 231
Query: 228 NTN-----------FAVVTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPFHEVFG 275
+ + T WD R M E PP F RW+N++ F F
Sbjct: 232 DVAHNAEWVDCERMVCLATDGPWDMRKFMYECGVLRDGYAFPPLFYRWVNIRRCFACYFH 291
Query: 276 GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
L + +++ G + G+ H G+DDA+N AR+L LM RG + +++ +
Sbjct: 292 TRPRKLTDMLKVLGFPFVGQQHSGIDDARNIARILIELMRRGCRIKDVSTISY 344
>gi|72387359|ref|XP_844104.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360612|gb|AAX81023.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800636|gb|AAZ10545.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 762
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F Y +V+DFEATC++ P Y EIIEFP V+V + ++ F YV+P LS+FC
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLHEIIEFPVVVVDAKLQRVITEFHRYVKPKVKPQLSEFC 611
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VMLESECRFK 252
+ LTGI+Q +D L + + + ++W + +VT D R M +
Sbjct: 612 RQLTGIRQEDIDSAAPLEDVIKQFERWYAQTIPPGSRTVLVTDGPADLREFMYVHSVTRQ 671
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P F +WI++K F F + +K +E+ ++GR H G+DDA+N A+++
Sbjct: 672 GIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVLQCPFEGRLHSGIDDARNIAKIVIR 731
Query: 313 LMHRGFKF 320
++ G F
Sbjct: 732 MLEVGCSF 739
>gi|261327261|emb|CBH10237.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 762
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F Y +V+DFEATC++ P Y EIIEFP V+V + ++ F YV+P LS+FC
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLHEIIEFPVVVVDAKLQRVITEFHRYVKPKVKPQLSEFC 611
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VMLESECRFK 252
+ LTGI+Q +D L + + + ++W + +VT D R M +
Sbjct: 612 RQLTGIRQEDIDSAAPLEDVIKQFERWYAQTIPPGSRTVLVTDGPADLREFMYVHSVTRQ 671
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P F +WI++K F F + +K +E+ ++GR H G+DDA+N A+++
Sbjct: 672 GIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVLQCPFEGRLHSGIDDARNIAKIVIR 731
Query: 313 LMHRGFKF 320
++ G F
Sbjct: 732 MLEVGCSF 739
>gi|323451416|gb|EGB07293.1| hypothetical protein AURANDRAFT_14950 [Aureococcus anophagefferens]
Length = 191
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 21/192 (10%)
Query: 141 IDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQ 200
+DFE TC+ + Y EIIEFP V+ + T ++ F +YVRPT N LS FC DLTGI+
Sbjct: 1 LDFECTCEPGWD-YIHEIIEFPVVLFDTRTREITDSFHSYVRPTENATLSAFCTDLTGIE 59
Query: 201 QIQVDRGVTLSEALLRHDKWLENKGIKN----TNFAVVTWSNWDCRVMLESECRFKKIWK 256
Q VD TL E L D WL +G+ +FA+ T WD L+ E K ++K
Sbjct: 60 QATVDAAPTLPEVLDDLDAWLRARGLVGAEPAASFALAT-DGWDLEHFLDVELSRKLLYK 118
Query: 257 P-PYFNRWINLKVPFH-------------EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDD 302
P Y +RW++L F + R NL + + ++GR H G+DD
Sbjct: 119 PGDYLDRWVDLSKAFDLRRAAKDVENGRKKGRSRRRSNLNTMLRHHKMEFEGRLHSGIDD 178
Query: 303 AKNTARL-LALL 313
A N AR+ +ALL
Sbjct: 179 ATNLARVGIALL 190
>gi|389593763|ref|XP_003722130.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438628|emb|CBZ12387.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 405
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 126 HPYD----FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQT 179
H YD Q F Y +V+D EATC+++ YP E+IE P V+++ TGQ++ F T
Sbjct: 60 HTYDDTDPLDQQLFDYIIVVDVEATCEQNNRNYPHEVIEIPGVLINVRTGQVDRARSFHT 119
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW 239
+V+P N L+ FC LTGI Q VD +++EA+ +KW + W
Sbjct: 120 FVKPWRNPRLTPFCTQLTGITQEVVDAAPSITEAIQLFEKWYWETIPRGAKTIFAADGPW 179
Query: 240 DCRVML-ESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAH 297
D + + E + P F +++++ F H + GV L + L + GR H
Sbjct: 180 DFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMNLRFDGRPH 239
Query: 298 CGLDDAKNTARLLALLMHRG 317
G DDA N ARL +M G
Sbjct: 240 NGFDDAYNIARLAVAMMKAG 259
>gi|71755417|ref|XP_828623.1| phosphotransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834009|gb|EAN79511.1| phosphotransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 540
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
Y + F ++V+DFEATC++ + E+IEFP V+V + G + FQ YVRP N
Sbjct: 24 YPLREPPFDTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRPVVNP 83
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL--ENKGIK--NTNFAVVTWSNWDCRV 243
LS FC +LTGI Q VDR T + +L N G + N + VT +WD +
Sbjct: 84 QLSQFCTELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGEREINKRYLPVTCGDWDLKT 143
Query: 244 MLESECRFK-----KIWKPPYFNRWINLKVPFHEVFG---------GVRCNLKEAVEMAG 289
ML + + + PP RW N+K V +R +L + + + G
Sbjct: 144 MLPIQVKACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIR-DLPDMMSVLG 202
Query: 290 LAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPP 348
L +GR H G+DD +N A +L L+ G + T + G+ +W L P
Sbjct: 203 LEMKGRHHSGIDDCRNIAAVLCELIKLGHVITPTTDYNSELTRGT-SWVSVGATTSLKP 260
>gi|308456231|ref|XP_003090574.1| CRE-ERI-1 protein [Caenorhabditis remanei]
gi|308262483|gb|EFP06436.1| CRE-ERI-1 protein [Caenorhabditis remanei]
Length = 584
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y + DFE TC + YP EIIE P+V++ ++ + F++YVRP N LS+FC
Sbjct: 143 FDYLIAADFECTCVEVIYDYPHEIIELPAVLIDVREMKIVSEFRSYVRPVKNPKLSEFCI 202
Query: 195 DLTG----------------IQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTW 236
T I Q VD EAL R +W+ + G+ KNT FA VT
Sbjct: 203 QFTSRWPPLLVPSLIDFLPEIAQETVDEAPYFREALDRLIQWMRHFGLGEKNTRFAFVTD 262
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLA 291
D ++ +C I P F +IN+K F E F G+ + ++ +E L+
Sbjct: 263 GPHDMWKFMQFQCLLSNIRMPHMFRNFINIKKTFKEKFNGLVKGNGKSGIENMLERLELS 322
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
+ G H GLDDA+N A++ +M + I W
Sbjct: 323 FIGNKHSGLDDARNIAQIAIQMMKLKIELRINQKCSW 359
>gi|261334507|emb|CBH17501.1| phosphotransferase, putative [Trypanosoma brucei gambiense DAL972]
Length = 540
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
Y + F ++V+DFEATC++ + E+IEFP V+V + G + FQ YVRP N
Sbjct: 24 YPLREPPFDTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRPVVNP 83
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIK----NTNFAVVTWSNWDCRV 243
LS+FC +LTGI Q VDR T + +L N + VT +WD +
Sbjct: 84 QLSEFCTELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGETEINKRYLPVTCGDWDLKT 143
Query: 244 MLESECRFK-----KIWKPPYFNRWINLKVPFHEVFG---GVRC-----NLKEAVEMAGL 290
ML + + + PP RW N+K V G +L + + + GL
Sbjct: 144 MLPIQVKACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIHDLPDMMSVLGL 203
Query: 291 AWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPP 348
+GR H G+DD +N A +L L+ G + T + G+ +W L P
Sbjct: 204 EMKGRHHSGIDDCRNIAAVLCELIKLGHVITPTTDYNSELTRGT-SWVNVGATTSLKP 260
>gi|170590708|ref|XP_001900113.1| exonuclease family protein [Brugia malayi]
gi|158592263|gb|EDP30863.1| exonuclease family protein [Brugia malayi]
Length = 399
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 135 FQYFV--------VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ YFV VIDFE TC+ D Y EIIEFP+V+V ++ F +YVRP N
Sbjct: 135 YDYFVMNNYDCSQVIDFECTCEADLYDYNHEIIEFPAVLVDVRKKEIVDVFHSYVRPLAN 194
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVM 244
LS+FC TGI Q +D+ + + L W++ G + +A VT WD
Sbjct: 195 PQLSEFCSAFTGITQEMIDKALPFIDVLDSFRTWMQLHRLGQNDMRYAFVTDGPWDIAKF 254
Query: 245 LESECRFKKIWKPPY-FNRWINLKVPFH----EVFGGVRCNLKEAVEMAGLAWQGRAHCG 299
+ +C K+ P+ F +IN++ F + + + NL + + ++GR H G
Sbjct: 255 FQMQCIQSKLNTVPHDFRFYINIRRSFANKYCKKYSMQKINLGGMLTFLNMKFEGREHSG 314
Query: 300 LDDAKNTARLLALLMHRGFKFSITNSLM 327
LDD+KN AR++ ++ + + L+
Sbjct: 315 LDDSKNIARIVIKMLEDRSELRVNEKLV 342
>gi|407832351|gb|EKF98421.1| hypothetical protein TCSYLVIO_010684 [Trypanosoma cruzi]
Length = 394
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 102/214 (47%), Gaps = 9/214 (4%)
Query: 117 APY-NMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 175
PY ++ A P D Q F Y +V+D EATC+ + + Y EIIEFP V++ G ++
Sbjct: 65 VPYVSIYDEADPLD--RQLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDK 122
Query: 176 --CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
F++YV+P N +LS+FCK LTGI Q VD L + + ++W A
Sbjct: 123 RRSFRSYVKPWRNPVLSEFCKKLTGISQEDVDNAPGLPDVVKAFERWYRETIPIGAKVAF 182
Query: 234 VTWSNWDCR-VMLESECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLA 291
WD + + E + P F +++++ F H G L + L
Sbjct: 183 AADGPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLR 242
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRG--FKFSIT 323
++GR HCG DDA N ARL +M G F F I
Sbjct: 243 FEGRPHCGFDDAVNIARLAVAMMRAGCIFDFLIV 276
>gi|340058722|emb|CCC53082.1| putative phosphotransferase [Trypanosoma vivax Y486]
Length = 525
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F +VV+DFEATC++ + EIIEFP VIV S +G A FQ YV+P LSDFC
Sbjct: 24 FHAYVVLDFEATCERGRRIPDPEIIEFPMVIVDSESGASIAEFQRYVQPVLKPRLSDFCT 83
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN----TNFAVVTWSNWDCRVMLESECR 250
+LTGI Q V+ T ++L + G + +F VT +WD + ML + R
Sbjct: 84 ELTGITQATVNAAQTFPFVFREALEFLHSHGFGDEAPYKSFLFVTCGDWDLQTMLPIQLR 143
Query: 251 FK-----KIWKPPYFNRWINLKVPFHEVFGGVRC------NLKEAVEMAGLAWQGRAHCG 299
+ PP F RW N+K + C ++ + + + L +GR H G
Sbjct: 144 ISAEYGTSLQPPPSFYRWCNIKKLMQRLLPSA-CASRRIRDIPDMLAVYNLELRGRHHSG 202
Query: 300 LDDAKNTARLLALLM 314
+DD +N A +L L+
Sbjct: 203 IDDCRNIATVLNRLV 217
>gi|340052992|emb|CCC47278.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 746
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F Y +V+DFEATC++ P Y EIIEFP V+V + + A F YVRP LS+FC
Sbjct: 529 FDYLLVVDFEATCEEHPPPSYLHEIIEFPVVVVDTKLKRAVAEFHRYVRPKVQPKLSEFC 588
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR-VMLESECRFK 252
LTGI+Q +D L E + + ++W + T D R M +
Sbjct: 589 LRLTGIRQEDIDNAAPLEEVIRQFERWYAQTIPPGCRAVLATDGPTDMREFMYVHSVSRQ 648
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P F +WI++K F F + +K +E+ ++GR H G+DDAKN A ++
Sbjct: 649 GIRFPSMFYQWIDVKQAFANFFQCQQGKIKAMLEVLHCPFEGRLHSGMDDAKNIANIVIR 708
Query: 313 LMHRGFKF 320
++ G F
Sbjct: 709 MLQVGCSF 716
>gi|449551211|gb|EMD42175.1| hypothetical protein CERSUDRAFT_90779 [Ceriporiopsis subvermispora
B]
Length = 210
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
QY +++DFEATC D P EIIEFP+++ +++A F YVRP + L+ FC
Sbjct: 10 LQYLLILDFEATCGDDLRG-PPEIIEFPTLLYDIQKDEVQATFHEYVRPIISPTLTAFCT 68
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT--NFAVVTWSNWDCRVML------- 245
LTGI Q VD E R +L + GI + + A +T +WD + ML
Sbjct: 69 KLTGITQDTVDAAQPFPEVWSRFQDFLRSHGIYDAAESAAFLTCGDWDLKTMLPRQLALS 128
Query: 246 ESECRFKKIWK--PPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDD 302
ESE + PPY NRWIN+K F + +G + ++ + L +GR H G+DD
Sbjct: 129 ESEHGLDEAGDLIPPY-NRWINIKQAFRKQYGMRYQNDMLGMLRKLRLELEGRHHSGIDD 187
Query: 303 AKNTARLLALLMHRGFK 319
KN +++ + G+K
Sbjct: 188 CKNVLQIVRKMRAEGWK 204
>gi|434398749|ref|YP_007132753.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
gi|428269846|gb|AFZ35787.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
Length = 189
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 110/192 (57%), Gaps = 19/192 (9%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+ +QYF+++D EATC D+ P Q EIIE +VI+ + + + FQT+++P + +L+
Sbjct: 5 ENYQYFLIVDLEATCCDRKTIPRHQMEIIEIGAVIIEAKELNIISEFQTFIKPIRHPILT 64
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
+FC+ LT I Q Q+D + S+A+ +WL +NF +W ++D R E +C+
Sbjct: 65 NFCQQLTSITQKQIDSALNYSQAIAVFKEWL----YAYSNFIFGSWGDYD-RKQFEQDCQ 119
Query: 251 FKKIWKPPYFNRWINLKVPF------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
F ++ P ++ INLK F +G +K+A+++A + +G H G+DDA+
Sbjct: 120 FHQV-AYPIASKHINLKKLFSTNQELKSTYG-----MKQALQLAKIELEGTHHRGIDDAR 173
Query: 305 NTARLLALLMHR 316
N A+L+ ++ R
Sbjct: 174 NIAKLMPYILAR 185
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYP----QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
E+ Y VVIDFEATCD+ + P QEIIEFP V++ V Q+ Q YVRP
Sbjct: 7 HEYDYLVVIDFEATCDEGEQPKVTRENQEIIEFPWVVIDLVNQQVIDKRQIYVRPEWTSQ 66
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLES 247
L+ FC LTGI ++ L EA+ + D+++++ + F ++T +WD ++ L
Sbjct: 67 LTPFCVKLTGITDDKLREAPLLHEAMAQFDRYVDDCFARRGKTFCILTDGDWDLKMCLLQ 126
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
E R K I + P++ + ++K F +VF + +L + L +GR H GL D
Sbjct: 127 ETRKKDIARAPHYMTYFDVKEEFLKVFPQPSHYKPSLMTMLRHLNLVMEGRHHSGLYDCV 186
Query: 305 NTARLLALLMHRGFKFS 321
N + ++ L+ G F
Sbjct: 187 NISNIVLELIRHGHYFG 203
>gi|196013998|ref|XP_002116859.1| hypothetical protein TRIADDRAFT_4552 [Trichoplax adhaerens]
gi|190580577|gb|EDV20659.1| hypothetical protein TRIADDRAFT_4552, partial [Trichoplax
adhaerens]
Length = 189
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 137 YFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VIDFEAT K ++ + EIIEFP++++ + T ++ + F +YVRPT N+ LS FCK
Sbjct: 6 FYLVIDFEATTKSKYRDYHLPEIIEFPALLIDASTLEVFSEFHSYVRPTINRTLSKFCKR 65
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI Q VD+ + WL N NF++VT S + ++CR +K+
Sbjct: 66 LTGISQAMVDKASDFATVHHLFLNWLCNATSNRNNFSMVTSSCKGTIELFLTQCRREKVA 125
Query: 256 KPPYFNRWINLKVPFHEVFGGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P + WI+L + F + +G R + + + +A++GR G A+N A +L ++
Sbjct: 126 IPLWIEHWIDLPIIFRKCYGYHRFPTISDMLHKFQIAYEGRFLHGFQRAENLAAILCGML 185
Query: 315 HRG 317
G
Sbjct: 186 QDG 188
>gi|401416028|ref|XP_003872509.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488733|emb|CBZ23980.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 502
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 43/238 (18%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATC YP EIIEFP V++ + T ++ A F YVRP N L+ F
Sbjct: 218 QPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAF 277
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------------------ 222
C +LTGI Q VD L + + WL+
Sbjct: 278 CTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRF 337
Query: 223 ------NKGIKNTN----FAVVTWSNWDCRVMLESECRFKK--IWKPPYFNRWINLKVPF 270
+ NT+ + T WD R + EC + + PP R+IN++ +
Sbjct: 338 VYDEHTDAAKANTSAEAMVCMATDGPWDMRRFMH-ECSVLRDGVAFPPVCYRYINVRHSY 396
Query: 271 HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
+ F + L ++ ++++GR H G+DD +N AR+LA L RG++ +++ +
Sbjct: 397 SDHFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYRVHHVSTIKY 454
>gi|350586285|ref|XP_003128134.3| PREDICTED: ERI1 exoribonuclease 3-like [Sus scrofa]
Length = 232
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P +
Sbjct: 59 SFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQ 117
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML+
Sbjct: 118 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLQ 177
>gi|72387361|ref|XP_844105.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62360613|gb|AAX81024.1| exonuclease, putative [Trypanosoma brucei]
gi|70800637|gb|AAZ10546.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 291
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 108/241 (44%), Gaps = 43/241 (17%)
Query: 131 QPQEFQYFVVIDFEATCDKDK-NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
+PQ F + +V DFEATCD D YP EIIEFP V + + + A F +YV P L
Sbjct: 20 RPQPFSHLLVCDFEATCDADSAGLYPHEIIEFPVVCIDTAQLAVVAEFHSYVHPVRRPKL 79
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKW-------------------------LENK 224
+ FCK+LTGI Q VD TL E + + +W L +
Sbjct: 80 TAFCKELTGITQSVVDDAPTLPEVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDL 139
Query: 225 GIK--------------NTNFAVVTWSNWDCRVMLE--SECRFKKIWKPPYFNRWINLKV 268
G K T WD R + S R I+ PP F RW++++
Sbjct: 140 GKKFKYDEKDNKEWVGCERMVCFATDGPWDMRKFMHECSVVRDGHIF-PPLFYRWVDVRK 198
Query: 269 PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
F + F L + + L ++G+ H G+DD++N AR+L LM RGF +++ +
Sbjct: 199 CFKQHFNKWPRKLVDMLRTLRLDFEGKQHSGIDDSRNIARILIELMRRGFFVKRVSTIEY 258
Query: 329 Q 329
+
Sbjct: 259 K 259
>gi|261327263|emb|CBH10239.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 329
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 131 QPQEFQYFVVIDFEATCDKDK-NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
+PQ F + +V DFEATCD D YP EIIEFP V + + + A F +YV P L
Sbjct: 58 RPQPFSHLLVCDFEATCDADSAGLYPHEIIEFPVVCIDTAQLAVVAEFHSYVHPVRRPKL 117
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL---------------------------- 221
+ FCK+LTGI Q VD TL E + + +W+
Sbjct: 118 TAFCKELTGITQSVVDDAPTLPEVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDL 177
Query: 222 ---------ENKGIKNTNFAV--VTWSNWDCRVMLE--SECRFKKIWKPPYFNRWINLKV 268
+NK V T WD R + S R I+ PP F RW++++
Sbjct: 178 EKKFKYDEKDNKEWVGCERMVCFTTDGPWDMRKFMHECSVVRDGHIF-PPLFYRWVDVRK 236
Query: 269 PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF 318
F + F L + + L ++G+ H G+DD++N AR+L LM RGF
Sbjct: 237 CFKQHFNKWPRKLVDMLRTLRLDFEGKQHSGIDDSRNIARILIELMRRGF 286
>gi|335775859|gb|AEH58712.1| 3'-5' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 218
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 77 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 136
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
+LTGI Q VD T + L + W++ K + ++++T +WD L +CR
Sbjct: 137 INLTGITQDLVDGADTFPQVLRKVVDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCRLS 196
Query: 253 KIWKPPYFNRWINLKVPF 270
++ PP+ +WIN++ +
Sbjct: 197 RLKYPPFAKKWINIRKSY 214
>gi|307150076|ref|YP_003885460.1| exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
gi|306980304|gb|ADN12185.1| Exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
Length = 199
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 17/194 (8%)
Query: 134 EFQYFVVIDFEATC-------DKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
++ Y++V+D EATC + ++ + EIIE +V+V + A FQT+++P
Sbjct: 6 QYDYYLVLDLEATCCELLRSTEGERGTIKRHEMEIIEIGAVMVEKQDLTIVAEFQTFIKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRV 243
+L++FCK LT I Q QVD+ + EA + KWL N +N +W ++D
Sbjct: 66 VRYPILTNFCKSLTSITQTQVDQAPSYPEAAILLKKWLSN----YSNAVFGSWGDYDRHQ 121
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDD 302
L+ + +F ++ P + +NLK F E G R +KEA+E+AGL G H G+DD
Sbjct: 122 FLQ-DSKFHQVPFPIAYPH-VNLKQLFSERQGLPKRYGMKEALELAGLTLSGTHHRGIDD 179
Query: 303 AKNTARLLALLMHR 316
A+N A+LL ++ R
Sbjct: 180 ARNIAKLLPYILGR 193
>gi|47218928|emb|CAF98126.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 63/229 (27%)
Query: 159 IEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHD 218
+EFP+V++++ TG++E+ F YV+P + +LS FC +LTGI Q QV+ + L L R
Sbjct: 8 VEFPAVLLNTSTGEVESEFHAYVQPQEHPILSAFCTELTGITQTQVEAAIPLHICLSRFG 67
Query: 219 KWLENKGIKNTNF------------------AVVTWSNWDCRVMLESECRFKKIWKPPYF 260
+WL+ +K +TWS+WD V L+ ECR K+I KP
Sbjct: 68 RWLQELQVKTGLVFPNHPRTSAPSAASQKLCTFLTWSDWDLGVCLQYECRRKQIHKPDVL 127
Query: 261 NRWINLKVPFHEVFGGV--RC--------------------------------------- 279
N WI+L+ + GG C
Sbjct: 128 NSWIDLRSTYR--VGGCLPSCLPAFLPSCLPAFLPSFLSFFVLALLYFTVCLFQLFYDRK 185
Query: 280 --NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
L A++ G+ + GR H GLDDA+NTA L A +M G +T SL
Sbjct: 186 PRGLNGALQDLGIQFAGREHSGLDDARNTAGLAARMMRDGCVMKVTRSL 234
>gi|146092927|ref|XP_001466575.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070938|emb|CAM69614.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 502
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 43/238 (18%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATC YP EIIEFP V++ + T ++ A F YVRP N L+ F
Sbjct: 218 QPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAF 277
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------------------ 222
C +LTGI Q VD L + + WL+
Sbjct: 278 CTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRF 337
Query: 223 ------NKGIKNTN----FAVVTWSNWDCRVMLESECRFKK--IWKPPYFNRWINLKVPF 270
+ NT+ + T WD R + EC + + PP R+IN++ +
Sbjct: 338 VYDEHTDAAKANTSAEAMICMATDGPWDMRRFMH-ECSVLRDGVDFPPVCYRYINVRHSY 396
Query: 271 HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
+ F + L ++ ++++GR H G+DD +N AR+LA L RG++ +++ +
Sbjct: 397 SDHFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYRVHHVSTIKY 454
>gi|154340886|ref|XP_001566396.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063719|emb|CAM39904.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 508
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 124 PAHP--YDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYV 181
PA P Q F + +V DFEATC YP EIIEFP V++ + T ++ A F YV
Sbjct: 213 PARPPFKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYV 272
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK----------------- 224
RP N L+ FC +LTGI Q VD L + + WL +
Sbjct: 273 RPLRNPKLTAFCTELTGITQEMVDLADPLPMVVAQFQDWLRTEVYPLCRMWARHYGPNHL 332
Query: 225 --GIKNTN---------------------FAVVTWSNWDCRVMLESECRFKK--IWKPPY 259
+K+ + T WD R + EC + + PP
Sbjct: 333 SHNLKSEQRRFVYDELTDAAKANVSAEAMLCMATDGPWDMRRFMH-ECSVLRDGVDFPPV 391
Query: 260 FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK 319
R+IN++ + F + L ++ ++++GR H G+DD +N AR+LA L RG++
Sbjct: 392 CYRYINIRHSYSHHFKCRQVRLTHMLKQMSMSFEGRRHSGIDDTRNIARVLAELFARGYR 451
Query: 320 FSITNSLMW-QTNDGSLTWNQFPERIF 345
+++ + D L NQ + +
Sbjct: 452 VHHVSTIKYAHRGDSFLVSNQAAQELL 478
>gi|398018615|ref|XP_003862472.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500702|emb|CBZ35779.1| hypothetical protein, conserved [Leishmania donovani]
Length = 502
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 43/238 (18%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATC YP EIIEFP V++ + T ++ A F YVRP N L+ F
Sbjct: 218 QPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAF 277
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------------------ 222
C +LTGI Q VD L + + WL+
Sbjct: 278 CTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRF 337
Query: 223 ------NKGIKNTN----FAVVTWSNWDCRVMLESECRFKK--IWKPPYFNRWINLKVPF 270
+ NT+ + T WD R + EC + + PP R+IN++ +
Sbjct: 338 VYDEHTDAAKANTSAEAMICMATDGPWDMRRFMH-ECSVLRDGVDFPPVCYRYINVRHSY 396
Query: 271 HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW 328
+ F + L ++ ++++GR H G+DD +N AR+LA L RG++ +++ +
Sbjct: 397 SDHFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYRVHHVSTIKY 454
>gi|407832352|gb|EKF98422.1| hypothetical protein TCSYLVIO_010685 [Trypanosoma cruzi]
Length = 793
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +V+DFEATC++ P Y EIIEFP V+V + A F +V+P N LS+FC
Sbjct: 562 YDYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSEFC 621
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR--VMLESECRF 251
+ LTGI+Q +D + L + + R ++W + + T D + + + S R
Sbjct: 622 RQLTGIRQEDIDNALPLEDVIRRFERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVSR- 680
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ I P F +WI++K F F + +K ++ ++GR H G+DDA+N A ++
Sbjct: 681 QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATIVI 740
Query: 312 LLMHRGFKF 320
++ G F
Sbjct: 741 RMLKLGCSF 749
>gi|71417703|ref|XP_810632.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875193|gb|EAN88781.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 793
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +V+DFEATC++ P Y EIIEFP V+V + A F +V+P N LS+FC
Sbjct: 562 YDYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSEFC 621
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR--VMLESECRF 251
+ LTGI+Q +D + L + + R ++W + + T D + + + S R
Sbjct: 622 RQLTGIRQEDIDNALPLEDVIRRFERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVSR- 680
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ I P F +WI++K F F + +K ++ ++GR H G+DDA+N A ++
Sbjct: 681 QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATIVI 740
Query: 312 LLMHRGFKF 320
++ G F
Sbjct: 741 RMLKLGCSF 749
>gi|145509679|ref|XP_001440778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408006|emb|CAK73381.1| unnamed protein product [Paramecium tetraurelia]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 15/196 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F +++DFEATC ++ + Y QEIIEFP+ + + +++ FQ Y++P N +LSD
Sbjct: 232 QGFDNIIILDFEATCVRESDKKYLQEIIEFPAQVYNVQERKVKKEFQKYIKPVENPILSD 291
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECR 250
FC +LTGI Q QVD G+ L +A+ ++++E K G++ ++T ++D +L+ E
Sbjct: 292 FCTELTGITQQQVDEGILLDQAI---NEFIEFKQGLQKC--CILTCGDYDLH-LLKKEAA 345
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVR-----CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
K I +IN+K F + + C + E +++ GL GR H G+DD KN
Sbjct: 346 RKGIPISRELQYYINIKKVFPKSLRNPKDPKDPC-MVEMLKLCGLDLLGRHHSGIDDVKN 404
Query: 306 TARLLALLMH-RGFKF 320
R++ L++ + F+F
Sbjct: 405 ITRIVHYLINEKNFQF 420
>gi|389593757|ref|XP_003722127.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438625|emb|CBZ12384.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 502
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F + +V DFEATC YP EIIEFP V++ + T ++ A F YVRP N L+ F
Sbjct: 218 QPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAF 277
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLE------------------------------ 222
C +LTGI Q VD L + + WL+
Sbjct: 278 CTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCWMWARHYGPNRLSHNLKSEQRRF 337
Query: 223 ------NKGIKNTN----FAVVTWSNWDCRVMLESECRFKK--IWKPPYFNRWINLKVPF 270
+ NT+ + T WD R + +C + + PP R+IN++ +
Sbjct: 338 VYDEHTDAAKANTSAEAMVCMATDGPWDMRRFMH-QCSVLRDGVDFPPVCYRYINVRHSY 396
Query: 271 HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMW-Q 329
+ F + L ++ ++++GR H G+DD +N AR+LA L RG++ +++ +
Sbjct: 397 SDHFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYRVHHVSTITYAH 456
Query: 330 TNDGSLTWNQFPERIF 345
D L N+ + +
Sbjct: 457 RGDAFLESNRAAQELL 472
>gi|407410780|gb|EKF33093.1| hypothetical protein MOQ_003040 [Trypanosoma cruzi marinkellei]
Length = 795
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y +V+DFEATC++ P Y EIIEFP V+V + A F +V+P N LS+FC
Sbjct: 564 YDYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSEFC 623
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR--VMLESECRF 251
+ LTGI+Q +D + L + + R ++W + + T D + + + S R
Sbjct: 624 RQLTGIRQEDIDNALPLEDVIRRFERWHAQTIPPGSRTMLATDGPTDLKEFMYIHSVSR- 682
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ I P F +WI++K F F + +K ++ ++GR H G+DDA+N A ++
Sbjct: 683 QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATIVI 742
Query: 312 LLMHRGFKF 320
++ G F
Sbjct: 743 RMLKLGCTF 751
>gi|358333145|dbj|GAA37315.2| 3'-5' exoribonuclease 1 [Clonorchis sinensis]
Length = 643
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 127 PYDFQPQEF-QYFVVIDFEATCD----KDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTY 180
P P F Y ++ID EATCD + P YP EIIEFP ++ ++ T + F Y
Sbjct: 351 PVVLTPDTFYSYLLIIDLEATCDFQEHRQSAPEYPHEIIEFPILLYNTRTRKCIGVFHAY 410
Query: 181 VRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNW 239
+P L+ FC LT I Q +VD L R + WL N+ G+ N AVV
Sbjct: 411 CKPKLRPDLTAFCTSLTQISQHEVDNAHPFPHVLARIEDWLFNRHGLSNVRCAVVCDCGA 470
Query: 240 DCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV----RCNLKEAVEMAGLAWQGR 295
D + +CR I P + WINL F VF + R L + L++ G+
Sbjct: 471 DMGKFMRIQCRLDGIPLPSWATVWINLSKAF-RVFYKLPLRNRVTLSTMLRDLNLSFIGQ 529
Query: 296 AHCGLDDAKNTARLLALLMHRG 317
H GLDDA N R++ L+ G
Sbjct: 530 QHRGLDDAINILRIVRTLLADG 551
>gi|395334652|gb|EJF67028.1| Exonuclease [Dichomitus squalens LYAD-421 SS1]
Length = 218
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+Y +V+DFEATCD + P+ EIIEFP+++ ++ A F YVRPT + L+
Sbjct: 20 RLRYLLVLDFEATCDDSGHIVPRNETEIIEFPTLLYDVDEDKVHATFHEYVRPTRHPTLT 79
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESE 248
FC +LTGI Q V+ R+ ++L + + + A +T +WD + ML +
Sbjct: 80 PFCTELTGIGQSTVNAADPFPSVWERYQEFLRTREVLAQPEAVAYLTCGDWDLKTMLPQQ 139
Query: 249 CRFK----------KIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAH 297
R PY NRWINLK F +G + + A + +GR H
Sbjct: 140 LRLSGTQTGMDPSTNALTAPY-NRWINLKKSFQHHYGLKYPKGMDGMLRHAKMELEGRHH 198
Query: 298 CGLDDAKNTARLLALLMHRG 317
G+DD KN R++ + G
Sbjct: 199 SGIDDCKNILRIVQRMRRDG 218
>gi|281202353|gb|EFA76558.1| putative RNase III [Polysphondylium pallidum PN500]
Length = 164
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 80/157 (50%), Gaps = 21/157 (13%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
P F+Y VV+DFEATC+ QEIIEFPSVIV T ++ F+ YV+P N LS
Sbjct: 2 PSPFKYIVVLDFEATCENGTKIAKQEIIEFPSVIVEVETCKIVDTFREYVKPVHNPRLSA 61
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN------------TNFAVVTWSNW 239
FC +LTGIQQ VD T S + H +WL IKN F +T +W
Sbjct: 62 FCTELTGIQQAWVDEAQTFSVVMENHRQWL----IKNQLLLPSGERSPVNTFTFLTCGDW 117
Query: 240 DCRVMLESECRF----KKIWKPPYFNRWINLKVPFHE 272
D ML + +F W P YF WIN+K F +
Sbjct: 118 DLNQMLPVQYKFLAGSDGKW-PSYFCEWINIKKSFEQ 153
>gi|426215378|ref|XP_004001949.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Ovis aries]
gi|119627450|gb|EAX07045.1| prion protein interacting protein, isoform CRA_d [Homo sapiens]
gi|194375784|dbj|BAG57236.1| unnamed protein product [Homo sapiens]
gi|296488925|tpg|DAA31038.1| TPA: ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
Length = 160
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 9/159 (5%)
Query: 172 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 231
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 232 --AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM- 287
VT +WD +VML +C++ + YF +WINLK + G C K ++M
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 288 AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 157
>gi|83643695|ref|YP_432130.1| inhibitor of the KinA pathway to sporulation, exonuclease [Hahella
chejuensis KCTC 2396]
gi|83631738|gb|ABC27705.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Hahella chejuensis KCTC 2396]
Length = 190
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 105/186 (56%), Gaps = 9/186 (4%)
Query: 132 PQEFQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
P + Y+++ID EATC D+ P + E IE +V+V +++ + QT++RP + L
Sbjct: 4 PTKPDYYLIIDLEATCCDQGSVPRREMETIEIGAVMVDAMSLAVVDELQTFIRPVRHPQL 63
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+DFC++LT I+Q QVD T EA+ W+ + N+ +W ++D + E +C
Sbjct: 64 TDFCRELTTIKQTQVDSAPTYPEAIESLQGWMRH----YPNYLFCSWGDYD-KGQFEQDC 118
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+F +I P+ + +N+K F G + + A+ +AGL+ +G H G+DDA+N A+
Sbjct: 119 QFHRIAY-PFASGHLNIKKQFSATQGLKKKYGMAGALRVAGLSLEGSHHRGIDDARNMAK 177
Query: 309 LLALLM 314
L+ ++
Sbjct: 178 LMPYIV 183
>gi|148698604|gb|EDL30551.1| prion protein interacting protein 1, isoform CRA_b [Mus musculus]
gi|149035533|gb|EDL90214.1| similar to prion protein interacting protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 160
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 172 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 231
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 232 --AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMA 288
VT +WD +VML +C + + YF +WINLK + G + L + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 289 GLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
L GR H G+DD KN A ++ L +RGF F T+
Sbjct: 122 SLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 157
>gi|427725307|ref|YP_007072584.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
gi|427357027|gb|AFY39750.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
Length = 204
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 137 YFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y+++ID EATC DK+ + EIIE +V++ S T ++E+ +QT+V+P N L+DFCK
Sbjct: 24 YYLIIDLEATCCDDKSIPRHKMEIIEIGAVLLHSKTLEIESEYQTFVQPILNPTLTDFCK 83
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q V++ EA+ KWL ++ +W +D + E +C+ +
Sbjct: 84 TLTSITQGDVNQAPHFPEAIQGLQKWL----YPFRSYVFCSWGKYD-KTQFERDCQRHNV 138
Query: 255 WKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P+ ++ INLK F + + + A+E GL G H G+DDA+N AR++ L
Sbjct: 139 -DYPFPSKHINLKKSFSAIISSSKKFGMNGALEKLGLPLIGTHHRGIDDARNIARIVQAL 197
>gi|328787319|ref|XP_003250924.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Apis mellifera]
Length = 241
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
Q F Y +V+DFE TC K + PQEIIE P V + + ++ F Y++P + L+ F
Sbjct: 94 QHFNYLLVLDFECTCKKYEKIEPQEIIELPCAAVCTKSWEIVNMFHEYIKPKVHPQLTPF 153
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKG-IKNTN-FAVVTWSNWDCRVMLESECR 250
C LTGI Q VD SE ++ WLE KN N A V +WD + ML ++C+
Sbjct: 154 CTQLTGIIQDMVDNESHFSEVFMKFCNWLEEHNYFKNGNDSAFVICGDWDLKFMLPAQCK 213
Query: 251 FKKIWKPPYFNRWINLKVPF 270
+ I P +F +WINLK F
Sbjct: 214 LENISFPTHFMKWINLKGAF 233
>gi|300864441|ref|ZP_07109312.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
gi|300337585|emb|CBN54460.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
Length = 192
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 129 DFQPQEFQYFVVIDFEATC-DKDK-NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
D + + Y++V+D EATC D++ N EIIE +V+V + FQT+++P +
Sbjct: 4 DMNLKHYNYYLVLDLEATCCDRETINREHMEIIEIGAVMVEPKNLTIVDEFQTFIKPVRH 63
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
+L++FCK LT I Q QVD T EA+ WL G N F +W ++D R +
Sbjct: 64 PILTEFCKSLTSISQKQVDLAPTYPEAIALLKNWLS--GYSNAVFG--SWGDYD-RKQFQ 118
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+ F K+ P + +NLK F E G R + +A+++ GL +G H G+DDA+N
Sbjct: 119 QDSNFHKVPFPIAYPH-VNLKQLFTEQQGLRKRPGMAKALQLVGLPLEGTHHRGIDDARN 177
Query: 306 TARLLALLM 314
A+LL ++
Sbjct: 178 IAKLLPYIL 186
>gi|301781889|ref|XP_002926359.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 2 [Ailuropoda
melanoleuca]
Length = 160
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 9/159 (5%)
Query: 172 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 231
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 232 --AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM- 287
VT +WD +VML +C++ + YF +WINLK + G C K ++M
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 288 AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
GL+ Q GR H G+DD KN A ++ L ++GF F T+
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYQGFIFKQTS 157
>gi|428315536|ref|YP_007113418.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
gi|428239216|gb|AFZ05002.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
Length = 189
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 10/183 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++V+D EATC + Q E+IE +V+V + T + FQ++++P + +L++FCK
Sbjct: 9 YLVVDLEATCCDRQATIKQTEMEVIEIGAVMVEAKTLTIIDEFQSFIKPIRHPILTEFCK 68
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q QVDR T EA+ WL G N F +W ++D R + + F KI
Sbjct: 69 SLTSISQAQVDRAPTYPEAIALLKNWLS--GYSNGVFG--SWGDFD-RQQFQQDSNFHKI 123
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P + +NLK F + G R + +A+ +AGL +G H G+DDA+N A+LL +
Sbjct: 124 PFPIAYPH-VNLKQLFSQKQGLRKRHGMAKALTLAGLPLEGTHHRGIDDARNIAKLLPYI 182
Query: 314 MHR 316
+ R
Sbjct: 183 LER 185
>gi|291002083|ref|XP_002683608.1| exonuclease family protein [Naegleria gruberi]
gi|284097237|gb|EFC50864.1| exonuclease family protein [Naegleria gruberi]
Length = 366
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 135 FQYFVVIDFEATCDKDKNPY----PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+ Y V+IDFEATCD NP QE+IEFP V+ + ++ + YV+PT + L+
Sbjct: 132 YDYLVIIDFEATCDNGVNPVITRDNQEMIEFPFVVFDLASMEVIHKERYYVKPTWSDKLT 191
Query: 191 DFCKDLTGI-QQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
FC LTGI +I G++LS A+ +++ F ++T S WD + +L E
Sbjct: 192 PFCTQLTGITDEILEKEGISLSNAIQNFHNYVKKTFTDGKTFCILTDSEWDIKGLLIKEA 251
Query: 250 RFKKIWKPPYFNRWINLKVPFHEV--FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
K I YF + +L+ + + + VR LK V+ +GL++ G+ H GL D +
Sbjct: 252 TTKGISFDSYFRTFYDLRKEYSKCYPYAFVR-GLKSMVDQSGLSFVGQHHSGLCDCLTIS 310
Query: 308 RLLALLMHRGFKF 320
++ +++ G F
Sbjct: 311 EIVKRMIYDGHIF 323
>gi|313217587|emb|CBY38652.1| unnamed protein product [Oikopleura dioica]
gi|313232309|emb|CBY09418.1| unnamed protein product [Oikopleura dioica]
Length = 627
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 136 QYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+YFV IDFEATC+++ YP EIIEFP+ +V + ++ F +YVRP LSDFC
Sbjct: 85 KYFVCIDFEATCERNNTFNYPHEIIEFPACLVHIESRKIVGEFHSYVRPFRKAHLSDFCM 144
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI------------KNT-NFAVVTWSNWDC 241
+LTGI Q +VD+ + + WL + G+ K+T ++ ++T S D
Sbjct: 145 ELTGITQEKVDQAPYFPQVFKQFVGWLRSYGLLDQTSDGRVKISKHTPSWTLLTDSPADI 204
Query: 242 RVMLESECRFKKIWKP-PYFNRWINLKVPFHEVFGG----VRCNLKEAVEMAGLAWQGRA 296
L +C I P + +R+ N+K F V+ +++ +E+ G+ +G
Sbjct: 205 CKFLAKQCEMDDIAFPYNWASRYCNIKKIFMSVYKPKYHRFTPKIEDMLEILGMEMRGDL 264
Query: 297 HCGLDDAKNTARLLALLMHRG 317
H G DDA+N R+ L+ G
Sbjct: 265 HSGKDDARNICRIAIRLIKDG 285
>gi|350535268|ref|NP_001232995.1| uncharacterized protein LOC100162389 [Acyrthosiphon pisum]
gi|239793057|dbj|BAH72792.1| ACYPI003543 [Acyrthosiphon pisum]
Length = 248
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 133 QEFQYFVVIDFEATCDKDKNPY-PQEIIEFPSVIV--SSVTGQLE--ACFQTYVRPTCNQ 187
Q + F V+DFEATCD + PQEIIEFP ++V + G E + F +YV+P +
Sbjct: 44 QPYTKFFVLDFEATCDNGAHLLKPQEIIEFPCILVKFNMAKGGFEVVSIFHSYVKPIIHT 103
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLE 246
+L+++C LTG+ Q V + W ++ + +VT NWD M
Sbjct: 104 VLTEYCTQLTGVTQDMVSNSPPFDDVFFNFCNWHNDHTNMGKEKSIIVTSGNWDIGNMFI 163
Query: 247 SECRF--KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+C+ I P + WIN+K F G +K ++ G H G+DD
Sbjct: 164 EQCKLFPSTIKIPEFMCTWINIKKLFALTMGEYPLGIKSMLKTTNSKQFGNIHSGIDDCV 223
Query: 305 NTARLLALLMHRGFKFSITNSLM 327
N ++ L RG F TN ++
Sbjct: 224 NIITIMNQLSQRGCVFQATNKII 246
>gi|402589059|gb|EJW82991.1| hypothetical protein WUBG_06097 [Wuchereria bancrofti]
Length = 149
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ Q+F YF+V+DFEATC++ P QEIIEFP + +S + F YVRPT
Sbjct: 9 FTINKQDFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRPTER 68
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN------FAVVTWSNWD 240
+L+ FC DLTGI Q V+ +L E L DKWL + + NT+ F +T +WD
Sbjct: 69 PILTSFCTDLTGIVQETVESQASLPEVLDAFDKWLLDLNLINTDHSMKSLFTFITSGDWD 128
Query: 241 CRVMLESECRFKKIWKP 257
V+L SE ++ + P
Sbjct: 129 LGVLLPSEANYRNLELP 145
>gi|114053091|ref|NP_001039944.1| ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
gi|82571565|gb|AAI10160.1| Exoribonuclease 3 [Bos taurus]
Length = 160
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 172 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 231
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 232 --AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMA 288
VT +WD +VML +C++ + YF +WINLK + G + L + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 289 GLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
L GR H G+DD KN A ++ L +R F F T+
Sbjct: 122 SLQHIGRPHSGIDDCKNIANIMKTLAYRCFIFKQTS 157
>gi|449547643|gb|EMD38611.1| hypothetical protein CERSUDRAFT_113791 [Ceriporiopsis subvermispora
B]
Length = 266
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 51/258 (19%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSV----TGQLEAC-----F 177
Y+ QE++ F+V D E+TC K YP EIIE+P ++ TG+ E F
Sbjct: 3 YEVAEQEYEAFLVFDVESTCIKGGQFDYPNEIIEWPVCLMRRKDRDGTGRAEMLEIVDEF 62
Query: 178 QTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN------- 230
+++V+PT N LS+FC +LTGI Q Q+D T +E L WL+ KG+ +++
Sbjct: 63 RSFVKPTRNPQLSEFCTNLTGITQEQIDAAPTFTEMLGEFSLWLDRKGLIDSHSGEHRIR 122
Query: 231 FAVVTWSNWDCRVMLESECRFKKIWKPPYF-NRWINLKVPFHEVFGGV-----RC-NLKE 283
F + D + +C KI P + R+IN++ + + G+ RC +++E
Sbjct: 123 FCWCCDGDHDISDFVTKQCFISKIPLPAWIQGRFINVRRMVYGWYAGMLHNASRCRDMRE 182
Query: 284 AVEMAGLAW--------------------QGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
L + QGR H G+DDA+N +R+LA L RG
Sbjct: 183 GSNAPQLPYSLPEPLTIPRQLETLQLPPFQGRQHSGIDDARNISRILAELSKRGIDLE-P 241
Query: 324 NSLM------WQTNDGSL 335
N+++ W DG++
Sbjct: 242 NAVIRARRWPWMGPDGTI 259
>gi|75812567|ref|YP_320186.1| exonuclease [Anabaena variabilis ATCC 29413]
gi|75705323|gb|ABA24997.1| Exonuclease [Anabaena variabilis ATCC 29413]
Length = 192
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 134 EFQYFVVIDFEATC-DKDK-NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
+F YF+V+D EATC DK + EIIE +V+V + T ++ FQT+++P + +L++
Sbjct: 6 QFDYFLVLDLEATCCDKGTIKRHEMEIIEIGAVMVEAQTLKILDEFQTFIKPIRHPILTE 65
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FCK LT I Q QVD EA+ +WL K N +W ++D R + + +F
Sbjct: 66 FCKLLTSITQTQVDHAPEYPEAIAMLKQWLS----KYPNAVFGSWGDYD-RNQFKQDSKF 120
Query: 252 KKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P + INLK F E R + EA+++ + +G H G+DDAKN A+LL
Sbjct: 121 HNILFPIAYPH-INLKQMFSESQDLPKRYGMAEALQLVNIELEGIHHRGIDDAKNIAKLL 179
>gi|170573706|ref|XP_001892569.1| exonuclease family protein [Brugia malayi]
gi|158601787|gb|EDP38593.1| exonuclease family protein [Brugia malayi]
Length = 193
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 128 YDFQPQEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ Q F YF+++DFEATC++ P QEIIEFP + +S + F YVRPT
Sbjct: 53 FAINKQNFDYFLILDFEATCEEGMKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRPTER 112
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN------FAVVTWSNWD 240
+L+ FC DLTGI Q V+ +L E L D+WL + + NT+ F VT +WD
Sbjct: 113 PILTSFCTDLTGIVQETVESQESLPEVLNAFDEWLLDLNLINTDHSMKSLFTFVTSGDWD 172
Query: 241 CRVMLESECRFKKIWKP 257
V+L SE ++ + P
Sbjct: 173 LGVLLPSEANYRNLELP 189
>gi|429213820|ref|ZP_19204984.1| putative exonuclease [Pseudomonas sp. M1]
gi|428155415|gb|EKX01964.1| putative exonuclease [Pseudomonas sp. M1]
Length = 179
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + EIIE + +V++ G+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVEEMEIIEIGASLVAAADGRELDHFQRFVRPQRRPLLTSFCRE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD L+E + ++WL + +A +W ++D R LE E R + I
Sbjct: 63 LTHISQADVDGAAPLTEVWPQFERWLAQHSPRLAGWA--SWGDYDRR-QLELEWRQQHID 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + R L A+++AGL +QG+ H L+DA+NTARLL L +
Sbjct: 120 SHLSQVPHLNLKQRFAQARQLKRPVGLNTALQLAGLHFQGQQHRALEDARNTARLLPLAL 179
>gi|146181163|ref|XP_001022261.2| exonuclease family protein [Tetrahymena thermophila]
gi|146144274|gb|EAS02016.2| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 200
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
Y V+ DFE K EIIEFP VIV ++ F T+V+PT + L++F K+L
Sbjct: 9 YLVISDFECNSGM-KGFVLHEIIEFPIVIVDVKNKKIIKEFTTFVKPTYHPKLTNFIKNL 67
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC---RVMLESECRFKK 253
T I+Q VD+ T+SE + + + +NTN + T+ +DC L +E K
Sbjct: 68 TYIEQKDVDQAPTISEVF----EIITQEIKQNTNDSDSTFFIFDCDSDATYLRAEINLKN 123
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ PYFN++ NLK F F +L+ +++ L G H L DA+N +++ +
Sbjct: 124 LKHSPYFNQYFNLKELFDRFFNVKAKSLENMLKILNLTQTGHPHIALHDARNICQVVMCM 183
Query: 314 MHRGFKFSIT 323
+ +G+ F T
Sbjct: 184 LEKGYIFDQT 193
>gi|390594208|gb|EIN03621.1| hypothetical protein PUNSTDRAFT_146951 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 285
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV--------SSVTGQLEAC--FQTYV 181
Q + +VID EATC + +P EIIE+P ++ S V L F+ +V
Sbjct: 34 QTYDALLVIDVEATCQAGTDFAWPNEIIEWPVCLMRWMDKDGPSGVAKDLRIVDEFRAFV 93
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-------NFAVV 234
+PT +LS FC +LTGI+Q VD T E L +L G+ + F
Sbjct: 94 KPTWRPVLSKFCTELTGIEQADVDSAPTFPEVLASFRGFLVKNGLLDAETDERLCRFCFS 153
Query: 235 TWSNWDCRVMLESECRFKKIWKPP-----YFNRWINLKVPFHEVF-GGVRCNLKE----- 283
+ WD R L +C KI PP + + I ++ + F G R +L +
Sbjct: 154 SDGPWDLRDFLVKQCFISKIDIPPWIPIDFLDTRIVVQGHVRKDFPDGSRVHLNKRARSP 213
Query: 284 --AVEMAGLAWQ---GRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
++ GL + GR HCG+DDA+N AR+LA L RG K +S+
Sbjct: 214 SIVAQLRGLGLEPFAGRQHCGIDDARNVARILAELGRRGAKLQPNSSI 261
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQL 188
+ QEF +F+VID E EI+EFP +IV + T ++ F +VRPT Q
Sbjct: 119 KSQEFNFFLVIDLEGKV---------EILEFPVLIVDAKTMEVVDLFHRFVRPTKMSEQA 169
Query: 189 LSDFCKDL---TGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWSN 238
++ + + G+ ++ D + + L HD W ++ + A +T N
Sbjct: 170 INKYIEGKYGEVGVDRVWHDTAIPFKQVVEEFEAWLAEHDLWTKDTDGALNDAAFITCGN 229
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C I PPYF WINLK + +G + + G+ G H
Sbjct: 230 WDIKTKIPEQCVVSNINLPPYFTEWINLKDIYLNFYGREARGMVSMMRQCGIKLMGSHHL 289
Query: 299 GLDDAKNTARLLALLMHRGFKFSIT 323
G+DD KN R++ ++ G IT
Sbjct: 290 GIDDTKNITRVVQRMLSEGAVLKIT 314
>gi|186682035|ref|YP_001865231.1| exonuclease [Nostoc punctiforme PCC 73102]
gi|186464487|gb|ACC80288.1| Exonuclease, RNase T and DNA polymerase III [Nostoc punctiforme PCC
73102]
Length = 187
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 137 YFVVIDFEATC-DKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y++++D EATC DK P + EIIE +V+++ T ++++ FQ +++P + L+DFC
Sbjct: 8 YYLIVDLEATCCDKKTIPRHEMEIIEIGAVMLNRATWEIDSEFQQFIQPVRHPQLTDFCT 67
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT IQQ VD EA+ R +W+ N +W N+D + ++ +C F
Sbjct: 68 KLTSIQQQDVDEAPKFIEAISRFKEWI----CSFPNHIFCSWGNYDKKQFIQ-DCAFHN- 121
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ P+ + IN+K F E G R + +A+ G+ +G H G+DDA N A +
Sbjct: 122 FAYPFTSEHINIKEEFSEYLGVSKRFGMAQALNELGIELKGTHHRGIDDAHNIASI 177
>gi|291000550|ref|XP_002682842.1| predicted protein [Naegleria gruberi]
gi|284096470|gb|EFC50098.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 135 FQYFVVIDFEAT----CDKDKNPYPQEIIEFPSVIVS-SVTGQLEAC--FQTYVRPTCNQ 187
F+Y V+DFEA C ++N Y EIIEFPSV++ QL Q YV+
Sbjct: 1 FKYICVLDFEAVFADDCKTNRN-YDMEIIEFPSVLLKFESEKQLVVVDEIQNYVKTRRIP 59
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNT--NFAVVTWSNWDCRVM 244
+++ C LTGI Q V+ GV+ EAL RH++WL + G K T N + T +WD + M
Sbjct: 60 KINEECTKLTGITQEMVESGVSFEEALKRHNEWLMSHLGEKPTKDNILMATCGDWDLKTM 119
Query: 245 LESECRFKK---IWKPPYFNRWINLKVPFHEVFGGVRCN-LKEAVEMAGLAWQGRAHCGL 300
+ + F+K +F +W N+K F + + + N + + L G+ H G+
Sbjct: 120 IPHQVFFEKQTISLIGSHFTQWCNVKDVFAKFYNMEKVNGMLTMLNALKLPLLGKHHSGI 179
Query: 301 DDAKNTARLLALLMHRGFKFSIT 323
DD KN AR++ + +G F+ T
Sbjct: 180 DDCKNIARVVCKMAQQGCHFNAT 202
>gi|268577613|ref|XP_002643789.1| Hypothetical protein CBG02000 [Caenorhabditis briggsae]
Length = 299
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDF 192
F +++DFE TC+KD + YP EII+F ++++ + + F YVRP N L+DF
Sbjct: 9 FDNLLILDFEGTCEKDDHDYPSEIIQFSVCVLNTRDKIIREDVSFNKYVRPVINPKLTDF 68
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LTGI Q +D T E + WL+ + FA+V S D + + +
Sbjct: 69 CAELTGIDQDTIDNARTFPEVYNQFCAWLKEHDFQEKRFAIVCDSRQDMWRLAQYQFLLN 128
Query: 253 KIWKPPYFNRWINLKVPFHEVF------GGVRCNLKEAVE-MAGLAWQGRAHCGLDDAKN 305
K P F +W+NL + + + V +L E + + +G+AH +DD
Sbjct: 129 KQPFPTIFRQWVNLSLYYRQDLRMAQQQDAVHQSLIERMSAFYNIPNEGQAHNAMDDCSF 188
Query: 306 TARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFP 341
A++ ++ G +I SL ++ +N P
Sbjct: 189 LAKVTKRILDNGTFVNINESLKCIAGSRNVPFNVDP 224
>gi|49081684|gb|AAT50242.1| PA1575, partial [synthetic construct]
Length = 184
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT + P + EIIE + +V++ + FQ +VRP LL+ FC+D
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD L+ ++WL + +A +W ++D R LE E R +
Sbjct: 63 LTHISQANVDGAAHLNTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F EV R L A+++AG+++QG+ H L+DA+NTARLL L++
Sbjct: 120 SQLSEVPHVNLKQRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLLPLVL 179
>gi|15596772|ref|NP_250266.1| hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|107101007|ref|ZP_01364925.1| hypothetical protein PaerPA_01002037 [Pseudomonas aeruginosa PACS2]
gi|218892469|ref|YP_002441336.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|254234675|ref|ZP_04927998.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|254239923|ref|ZP_04933245.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|386059536|ref|YP_005976058.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|392984961|ref|YP_006483548.1| exonuclease [Pseudomonas aeruginosa DK2]
gi|416861264|ref|ZP_11914566.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|418587051|ref|ZP_13151087.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|418592488|ref|ZP_13156358.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|419755563|ref|ZP_14281918.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|420140571|ref|ZP_14648324.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|421154740|ref|ZP_15614242.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|421161644|ref|ZP_15620582.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|421181335|ref|ZP_15638848.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|421516209|ref|ZP_15962895.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|424940793|ref|ZP_18356556.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|451986062|ref|ZP_21934255.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|9947538|gb|AAG04964.1|AE004586_2 hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|126166606|gb|EAZ52117.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|126193301|gb|EAZ57364.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|218772695|emb|CAW28480.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|334836920|gb|EGM15705.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|346057239|dbj|GAA17122.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|347305842|gb|AEO75956.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|375042398|gb|EHS35052.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|375048663|gb|EHS41180.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|384398260|gb|EIE44668.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|392320466|gb|AFM65846.1| putative exonuclease [Pseudomonas aeruginosa DK2]
gi|403246670|gb|EJY60373.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|404349937|gb|EJZ76274.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|404521648|gb|EKA32219.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|404539370|gb|EKA48856.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|404543967|gb|EKA53181.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|451756242|emb|CCQ86778.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|453046930|gb|EME94645.1| exonuclease [Pseudomonas aeruginosa PA21_ST175]
Length = 183
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT + P + EIIE + +V++ + FQ +VRP LL+ FC+D
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD L+ ++WL + +A +W ++D R LE E R +
Sbjct: 63 LTHISQANVDGAAHLNTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F EV R L A+++AG+++QG+ H L+DA+NTARLL L++
Sbjct: 120 SQLSEVPHVNLKQRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLLPLVL 179
>gi|427709554|ref|YP_007051931.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
gi|427362059|gb|AFY44781.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
Length = 188
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 134 EFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
++ Y +V+D EATC + EIIE +V+V + + FQT+++P +L+D
Sbjct: 6 QYDYLLVLDLEATCCDQGTIKRHEMEIIEIGAVMVEAQNLTVIDEFQTFIKPVRYPILTD 65
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FCK LT I QI VD+ EA+ KWL + N +W ++D R + + +F
Sbjct: 66 FCKSLTSITQIYVDQAPGYPEAIAILQKWLSHY----PNAVFGSWGDYD-RNQFKQDSKF 120
Query: 252 KKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + INLK F E R + EA+++ + QG H G+DDA+N A+LL
Sbjct: 121 HNLPFPIAYPH-INLKQHFSESQSLSKRYGMAEALQLVNIELQGTHHRGIDDARNIAKLL 179
Query: 311 ALLMHR 316
+++R
Sbjct: 180 PWILNR 185
>gi|116049519|ref|YP_791677.1| hypothetical protein PA14_44130 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390052|ref|ZP_06879527.1| hypothetical protein PaerPAb_17961 [Pseudomonas aeruginosa PAb1]
gi|313106587|ref|ZP_07792814.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|355644666|ref|ZP_09053861.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|386065404|ref|YP_005980708.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|416879532|ref|ZP_11920861.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|421168770|ref|ZP_15626836.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|421175341|ref|ZP_15633030.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
gi|115584740|gb|ABJ10755.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|310879316|gb|EFQ37910.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|334837330|gb|EGM16096.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|348033963|dbj|BAK89323.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|354829121|gb|EHF13208.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|404528564|gb|EKA38642.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|404532491|gb|EKA42374.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
Length = 183
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT + P + EIIE + +V++ + FQ +VRP LL+ FC+D
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD L ++WL + +A +W ++D R LE E R +
Sbjct: 63 LTHISQANVDGAAHLDTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F EV R L A+++AG+++QG+ H L+DA+NTARLL L++
Sbjct: 120 SQLSEVPHVNLKQRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLLPLVL 179
>gi|149922094|ref|ZP_01910534.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
gi|149817031|gb|EDM76513.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
Length = 213
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++VID EATCD D P+ EIIE +V+V T + FQ +VRP ++ L+ FC+
Sbjct: 6 YLVIDLEATCD-DAGAVPRREMEIIEIGAVLVDGQTLCPKREFQRFVRPLRHRTLTPFCR 64
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q +VD T E + ++ + G + +W +D R E + RF +
Sbjct: 65 QLTSITQAEVDGAATFPEVIAELRAFMYDDGGRPR---FCSWGAYD-RGQFEQDARFHGV 120
Query: 255 WKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +NLK F V G R + A+ GL +G H G+DDA+N A++L +
Sbjct: 121 ALP--FTDHLNLKAGFSRVLGTRKRYGMAGALRRLGLPLEGTHHRGIDDARNIAKILPFI 178
Query: 314 M 314
+
Sbjct: 179 V 179
>gi|357145920|ref|XP_003573813.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Brachypodium distachyon]
Length = 337
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+PQ+ YF+V+D E EI+EFP V++ + + + F +VRPT Q
Sbjct: 123 KPQKLDYFLVLDLEGKV---------EILEFPVVMIDAHSMEFVDSFHRFVRPTAMSEQR 173
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEALLR-------HDKWLENKGIKNTNFAVVTWSN 238
+ ++ G + ++ D + E L H+ W + +G + A +T N
Sbjct: 174 IREYIDGKYGKFGVDRVWHDTAIPFGEVLQEFEDWIGGHELWKQKQGESLNSAAFITCGN 233
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C+ K+ P YF WINLK + + + + + G H
Sbjct: 234 WDLKTKVPEQCKVSKLKLPSYFMEWINLKDIYLNFYNRRATGMMTMMRELQIPTVGSHHL 293
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
G+DDAKN AR++ ++ G IT TND
Sbjct: 294 GIDDAKNIARIVQRMLADGAMIQITAKRHSATND 327
>gi|152986809|ref|YP_001349107.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452879067|ref|ZP_21956213.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
gi|150961967|gb|ABR83992.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452184333|gb|EME11351.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
Length = 183
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT + P + EIIE + +V++ + FQ +VRP LL+ FC+D
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPLRRPLLTHFCRD 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD ++WL + +A +W ++D R LE E R ++
Sbjct: 63 LTHISQASVDGAAQFDAVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHRLS 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F EV R L A+++AG+++QG+ H L+DA+NTARLL L++
Sbjct: 120 SQLSEVPHVNLKQRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLLPLVL 179
>gi|403418454|emb|CCM05154.1| predicted protein [Fibroporia radiculosa]
Length = 398
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 24/202 (11%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+Y +++DFEATC N EIIEFP+++ S ++EA F YVRP + L+ FC
Sbjct: 196 LRYLLILDFEATCGDAVNGQ-NEIIEFPTLVYSLERDRVEATFHEYVRPVVHPTLTPFCT 254
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTN-FAVVTWSNWDCRVMLESECRFK 252
+LTGI Q V T R ++++ +G+ + F +T NWD + ML +
Sbjct: 255 ELTGITQDVVGCADTFPTVWKRFQGFMDDTEGLSDPGAFIFLTCGNWDLQSMLPRQLILS 314
Query: 253 K----------IWKPPYFNRWINLKVPFHEVFG-----GVRCNLKEAVEMAGLAWQGRAH 297
K + P FNR+IN+K F +++ G++ LK+ L +GR H
Sbjct: 315 KCESALDESDNLTAP--FNRFINIKHSFRKLYRLRRQQGMQAMLKD----LKLTLEGRHH 368
Query: 298 CGLDDAKNTARLLALLMHRGFK 319
G+DD KN R++ + G++
Sbjct: 369 SGIDDCKNILRIVQRMRADGWR 390
>gi|312090123|ref|XP_003146498.1| exonuclease [Loa loa]
gi|393907516|gb|EJD74680.1| exonuclease, variant [Loa loa]
Length = 192
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F YF+V+DFEATC++ P QEIIEFP + +S + + F YV+PT +L+
Sbjct: 57 QNFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKPTERPILTS 116
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN------TNFAVVTWSNWDCRVML 245
FC +LTGI Q V +L E L DKWL N + N ++F +T +WD V+L
Sbjct: 117 FCTELTGIVQETVASQESLPEVLDAFDKWLINSNLINADHSMKSHFTFITCGDWDLGVLL 176
Query: 246 ESECRFKKIWKP 257
SE ++ + P
Sbjct: 177 PSEANYRNLKLP 188
>gi|158258625|dbj|BAF85283.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VTWSN 238
+LTGI+Q QVD GV L L + KW+ + KN FA VTWS+
Sbjct: 2 ELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSD 61
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR H
Sbjct: 62 WDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHS 121
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSL 326
GLDD++NTA L ++ G IT SL
Sbjct: 122 GLDDSRNTALLAWKMIRDGCVMKITRSL 149
>gi|395835560|ref|XP_003790745.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 592
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLEN----------KGIKNTNF------AVVTWSN 238
+LTGI+Q QVD G L L + KW+ N G+ + A VTWS+
Sbjct: 2 ELTGIKQAQVDEGAPLKICLSQFCKWIHNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSD 61
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD V LE EC+ K++ KP + N WI+L+ + + L A++ G+ + GR H
Sbjct: 62 WDLGVCLEYECKRKQLLKPVFLNSWIDLRAIYKLFYRRKPKGLSGALQEVGIEFSGREHS 121
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSL 326
GLDD++NTA L ++ G + IT SL
Sbjct: 122 GLDDSRNTALLAWKMIRDGCQMKITRSL 149
>gi|146307535|ref|YP_001188000.1| exonuclease [Pseudomonas mendocina ymp]
gi|421502231|ref|ZP_15949186.1| exonuclease [Pseudomonas mendocina DLHK]
gi|145575736|gb|ABP85268.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas mendocina
ymp]
gi|400347078|gb|EJO95433.1| exonuclease [Pseudomonas mendocina DLHK]
Length = 182
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V + G FQ +V+P L+DFC++
Sbjct: 3 HWLVIDLEATTDEGGWPLEEMEIIEIGASLVGA-DGHERDHFQRFVKPQRRPCLTDFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD--CRVMLESECRFKK 253
LT I Q VD +L + + ++WLE + +V WS+W R LE E R +
Sbjct: 62 LTHIAQADVDSAGSLPQVWAQLERWLEQHAPR-----LVGWSSWGDYDRRQLEQEWRQHQ 116
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ +NLK F + R L A+++AGL +QG H L DA+NTARLL L
Sbjct: 117 LTSLLQGTPHLNLKQAFAKARQLPRPVGLHSALQLAGLQFQGAQHRALTDARNTARLLPL 176
Query: 313 LM 314
++
Sbjct: 177 VL 178
>gi|18400647|ref|NP_566502.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|75331425|sp|Q8W566.1|Y3514_ARATH RecName: Full=Uncharacterized exonuclease domain-containing protein
At3g15140
gi|16930517|gb|AAL31944.1|AF419612_1 AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|19310525|gb|AAL84996.1| AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|332642103|gb|AEE75624.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 337
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQL 188
+ QEF +F+VID E EI+EFP +IV + T ++ F +VRPT Q
Sbjct: 122 KSQEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQA 172
Query: 189 LSDFCKDL---TGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWSN 238
++ + + G+ ++ D + + L HD W ++ + A VT N
Sbjct: 173 INKYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGN 232
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C I PPYF WINLK + +G + + G+ G H
Sbjct: 233 WDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHL 292
Query: 299 GLDDAKNTARLLALLMHRGFKFSIT 323
G+DD KN R++ ++ G +T
Sbjct: 293 GIDDTKNITRVVQRMLSEGAVLKLT 317
>gi|356517082|ref|XP_003527219.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Glycine max]
Length = 299
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQ 187
+ Q+ +F+V+D E EI+EFP +++S+ T Q+E F +VRP+ +
Sbjct: 86 IRSQDLDFFLVLDLEGRV---------EILEFPVLMISAKTLQVEDIFHRFVRPSKMSER 136
Query: 188 LLSDFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWS 237
++++ + G + ++ D + ++ L+RH W+ K I+ A VT
Sbjct: 137 RINEYVEGKYGKFGVHRVWHDTAIPFTDVIQQFGTWLMRHQLWMGEKLIRA---AFVTCG 193
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
NWD + + +C KI PPYF WINLK + + + ++ + G H
Sbjct: 194 NWDLKTKVPQQCEVSKIELPPYFMEWINLKDVYLNFYDRRATGMVTMMKELQIPMVGSHH 253
Query: 298 CGLDDAKNTARLLALLMHRGFKFSIT 323
G+DD +N AR+L ++ G IT
Sbjct: 254 LGIDDTRNIARVLQHMLLDGALVQIT 279
>gi|313226631|emb|CBY21776.1| unnamed protein product [Oikopleura dioica]
gi|313240006|emb|CBY32366.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 56/248 (22%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ-------------------------------EIIEFPS 163
F + +VIDFEA+C P+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDYENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 164 VIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN 223
V+V+ T ++ + F +VRP + LSDFCK LT +++ + + TL E ++ + W ++
Sbjct: 63 VLVNLSTEEIISEFHEFVRPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 224 ----------------KGIKNTN--FAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWIN 265
+ IK++ + TW++WD L SE + KKI P W++
Sbjct: 123 VQKEHDLYFYTPKAAKENIKSSKRIACICTWTDWDISSQLLSETKRKKIEIPEMLKSWVD 182
Query: 266 LKVPFHEVFGGVRCN------LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK 319
L+ V L+ + + W+G+ H G+DDA+NTAR LA+ M K
Sbjct: 183 LRAVSRVYLQSVNKKMEHIPVLRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLK 241
Query: 320 FSITNSLM 327
+ T ++
Sbjct: 242 VTRTLGVL 249
>gi|328773880|gb|EGF83917.1| hypothetical protein BATDEDRAFT_33990 [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
FQP ++ ++V D EATCD D + E+IEFP + + T + + F+ Y RP +
Sbjct: 75 FQP--YRIYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRPILHPT 132
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNFAV--VTWSNWDC 241
L+DFCK LTGI Q Q D + +W+ G+ V VT WD
Sbjct: 133 LTDFCKQLTGITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDL 192
Query: 242 RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
R LE E + I +P + + A AW R HCG D
Sbjct: 193 RDFLEKEFIYSNIQRPDFIH----------------------ARSSISAAW--REHCGFD 228
Query: 302 DAKNTARLLALLMHRGFKF 320
DA N AR+L ++ G +
Sbjct: 229 DASNVARILRRMVEDGHRI 247
>gi|399520121|ref|ZP_10760897.1| exonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111562|emb|CCH37456.1| exonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 182
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ + EIIE + +V V G FQ V+P L+DFC++
Sbjct: 3 HWLVIDLEATTDEGGWAMEEMEIIEIGASLVG-VDGHERDHFQRIVKPQRRPCLTDFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD--CRVMLESECRFKK 253
LT I Q ++D TLS+ + ++WL + +V WS+W R LE E R +
Sbjct: 62 LTHITQAEIDSAATLSQVWAQFERWLTQHAPR-----LVGWSSWGDYDRRQLEQEWRQHQ 116
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ +NLK F + R L A+++AG+ +QG+ H L+DA+NTARLL L
Sbjct: 117 LHSLLAQVPHLNLKQAFAKARQLQRPVGLHSALQLAGMQFQGQQHRALEDARNTARLLPL 176
Query: 313 LM 314
++
Sbjct: 177 VL 178
>gi|224115354|ref|XP_002317011.1| predicted protein [Populus trichocarpa]
gi|222860076|gb|EEE97623.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+PQ+F +F+V D E EI+EFP +I+ + T + F +VRPT +
Sbjct: 45 RPQDFDFFLVFDLEGKV---------EILEFPVLIIDAKTMGVVDLFHRFVRPTAMSEER 95
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEAL-------LRHDKWLENKGIKNTNFAVVTWSN 238
++++ + G + ++ D + +E L +H+ W + +G + A VT N
Sbjct: 96 VNEYIYNKYGKFGVDRVWHDTALPFNEVLQQFESWLTQHNLWEKTRGGRLNRAAFVTCGN 155
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG--GVRCNLKEAVEMAGLAWQGRA 296
WD + + +C K+ PPYF WINLK + + ++ + + G
Sbjct: 156 WDVKTQVPHQCSVSKLKLPPYFMEWINLKDVYQNFYNPRNEARGMRTMMSQLKIPMVGSH 215
Query: 297 HCGLDDAKNTARLLALLMHRGFKFSIT 323
H GLDD KN AR+L ++ G IT
Sbjct: 216 HLGLDDTKNIARVLLRMLADGAVLPIT 242
>gi|434405656|ref|YP_007148541.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
gi|428259911|gb|AFZ25861.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
Length = 183
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 136 QYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
YF+++D EATC D+ P Q EIIE +V+++ T ++++ FQ +++P N L+ FC
Sbjct: 3 HYFLIVDLEATCCDQGSIPRHQMEIIEIGAVMLNRKTWEIDSEFQQFIQPVRNVQLTGFC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+LT I Q V +EA+ + W+++ N +W N+D L+ +C F K
Sbjct: 63 TELTSISQQDVANAPQFAEAISKFKAWIDS----FPNHIFCSWGNYDKSQFLQ-DCDFHK 117
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ P+ + IN+K F E G + + +A+ G+ +G H G+DDA+N A +
Sbjct: 118 V-PYPFGSEHINIKKEFSEYLGVSKGFGMAKALNHLGIELKGTHHRGIDDARNIAAI 173
>gi|440793448|gb|ELR14631.1| exonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 927
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYP------------QEIIEFPSVIVSSVTGQLEACFQT 179
P ++Y VV+D EATC++ +NP EIIEFP +V ++ Q
Sbjct: 7 PSRYRYVVVLDLEATCEEVRNPSSSGAGDGTENRLHHEIIEFPWAVVDLKEAKVIEQRQL 66
Query: 180 YVRP--TCNQLLSDFCKDLTGI-QQIQVDRGVTLSE-----ALLRHDKWLENKGIKNTNF 231
YV+P N+ LS FC LTGI + ++G L + A HD ++ G+
Sbjct: 67 YVKPEWEENRHLSAFCTKLTGITDAVLAEQGQPLKQCIAIFAQAMHDLQQQDGGVDKDLI 126
Query: 232 AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVR----CNLKEAVEM 287
V T +WD V L E K + P + R+IN++ + R LK +
Sbjct: 127 CVATDGDWDLDVQLRGEAAAKGLDVPYHLQRFINVREEVSYFYKPGREHHIKGLKSLLRY 186
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
GL QGR H G+DD N +++ L G F+ +++ + D
Sbjct: 187 LGLPHQGRHHSGIDDVLNICQIVLRLAADGHAFTPERAVVVGSTD 231
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQL 188
+ QEF +F+VID E EI+EFP +IV + T ++ F +VRPT Q
Sbjct: 122 KSQEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQA 172
Query: 189 LSDFCKDL---TGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWSN 238
++ + + G+ ++ D + + L HD W ++ + A VT N
Sbjct: 173 INKYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGN 232
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C I PPYF WINLK + +G + + G+ G H
Sbjct: 233 WDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHL 292
Query: 299 GLDDAKNTARLLALLMHRGFKFSIT 323
G+DD KN R++ ++ G +T
Sbjct: 293 GIDDTKNITRVVQRMLSEGAVLKLT 317
>gi|320162584|gb|EFW39483.1| three prime histone mRNA exonuclease [Capsaspora owczarzaki ATCC
30864]
Length = 897
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
Query: 127 PYDFQPQEFQYFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
P +QPQ F YFVVID+EATC+++ + YP EIIEFP+V+V++ TG++ +++YVRP
Sbjct: 566 PSHYQPQ-FDYFVVIDYEATCEENASFSTYPHEIIEFPAVVVNARTGEIVHSWRSYVRPV 624
Query: 185 CNQLLSDFCKDLTGIQQIQVD 205
N L+ FC LTGI Q QVD
Sbjct: 625 LNPTLTPFCTQLTGITQSQVD 645
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 231 FAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF----HEVFGGVRCNLKEAVE 286
FA++ WD R + +CR +I++P + +W+NL++ F H GG+ L E
Sbjct: 795 FAILCDGPWDLRDFMTKQCRHSQIFRPWFTQQWVNLRMHFSKFYHMKLGGIDFML----E 850
Query: 287 MAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQ 329
G+ +QG H GLDDA N AR+ ++ G + L+ Q
Sbjct: 851 SLGMQFQGNKHSGLDDATNIARVACQMLRDGCALHTNDDLIRQ 893
>gi|268577615|ref|XP_002643790.1| Hypothetical protein CBG02001 [Caenorhabditis briggsae]
Length = 299
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 9/217 (4%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDF 192
F +++DFEATC+KD YP EII+F ++++ + + F YVRP N L+DF
Sbjct: 9 FDDLLILDFEATCEKDNYDYPPEIIQFSVAVLNTREKIIREDVSFNKYVRPVINPQLTDF 68
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LTGI Q +D+ T E + WL I+ FA V S D + +
Sbjct: 69 CAELTGINQDTIDKADTFPEVYDQFTAWLNKHNIQEKRFAFVCDSRQDMWRFAQYQFLLN 128
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCN-------LKEAVEMAGLAWQGRAHCGLDDAKN 305
K P F +W+NL + + F + +++ + + G H +D+
Sbjct: 129 KQPLPTIFRQWVNLGHLYEQDFRKAQQQDIWGPSFIEKMSGFYNIPFNGHNHNAMDECAF 188
Query: 306 TARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPE 342
A++ ++ G +I SL + ++ +N P+
Sbjct: 189 LAKVTKRVLDDGNLVNINESLKCISGPRNVPFNIDPK 225
>gi|410093971|ref|ZP_11290433.1| exonuclease [Pseudomonas viridiflava UASWS0038]
gi|409758612|gb|EKN43891.1| exonuclease [Pseudomonas viridiflava UASWS0038]
Length = 207
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 20/195 (10%)
Query: 135 FQYFVVIDFEATCDKDKNP--------YPQE---IIEFPSVIVSSVTGQLEACFQTYVRP 183
+QY + ID EATCD+D P P+E IE +V + QL FQ+++RP
Sbjct: 20 YQYLLCIDLEATCDEDAKPGEPPRHLIVPREDMETIEIGLAVVDLSSLQLVDQFQSFIRP 79
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRV 243
+ + +L+DFC+ LT I+Q VD + D +LE N A +W ++D +
Sbjct: 80 SLHPVLTDFCRRLTTIKQSDVDGALGYVNVAGMLDAFLE----AYPNSAWCSWGDYDYKQ 135
Query: 244 MLESECRFKKIWKPPYFNRWI--NLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
+ + R P + + NLK +VF L+ AVEM GL W+G H G+D
Sbjct: 136 LQKDALRLNC---APMLDGMLHTNLKKWHWKVFNCKALGLQPAVEMLGLEWEGTYHRGID 192
Query: 302 DAKNTARLLALLMHR 316
DA+N + + ++ R
Sbjct: 193 DARNLSNVAIHMLGR 207
>gi|443472654|ref|ZP_21062680.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas pseudoalcaligenes KF707]
gi|442903096|gb|ELS28509.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas pseudoalcaligenes KF707]
Length = 180
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + EIIE + +V + +++ FQ +VRP L+ FC+
Sbjct: 3 HWLVIDLEATTEEGGWPLEEMEIIEIGASLVRADGHEVDH-FQRFVRPLRRPCLTGFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD +L + ++WL + + +A +W ++D R LE E R ++
Sbjct: 62 LTHISQADVDGAASLPQVWQAFERWLGHHRPRLVGWA--SWGDYD-RRQLEQEWRLHQLD 118
Query: 256 KPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F E G L A+++AGL++QG+ H L+DA+NTARLL L++
Sbjct: 119 SLLAATPHLNLKQRFAEARQLGRAVGLHAALQLAGLSFQGQQHRALEDARNTARLLPLVL 178
>gi|158337902|ref|YP_001519078.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158308143|gb|ABW29760.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 183
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+Y++++D EATC D N P+ E+IE +V+++S T Q+E+ +QT+++P + +L++F
Sbjct: 6 KYYLIVDLEATC-ADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEF 64
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK LT I Q +++ AL W G ++ +W ++D R +C+
Sbjct: 65 CKSLTSISQQDIEKAPLFPAALKDFQSWFYPCG----SYLFCSWGDYD-RHQFVQDCQMH 119
Query: 253 KIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+ +NLK F E+ + + A+ GL +G H G+DDA+N AR++
Sbjct: 120 GVGY-PFPGDHLNLKRAFSSEINSKKKFGMAGALTELGLELEGVHHRGIDDARNIARIV 177
>gi|414076664|ref|YP_006995982.1| exonuclease [Anabaena sp. 90]
gi|413970080|gb|AFW94169.1| exonuclease [Anabaena sp. 90]
Length = 185
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 137 YFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
YF++ID EATC K+ + EIIE +V+++ T +++ FQ +++P N L+ FC
Sbjct: 4 YFLIIDLEATCCNQKSIPRHQMEIIEIGAVMLNRQTWEIDDEFQQFIKPVRNPQLTAFCT 63
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+LT I Q QVD + E + + W+ N +W N+D L+ +C+F I
Sbjct: 64 ELTSISQQQVDAAQSFPEVMSKLTDWMN----LFPNNIFCSWGNYDKSQFLQ-DCKFHHI 118
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
P+ N+K F E G + + +A+E G+ QG H G+DDA+N +
Sbjct: 119 -PYPFGAEHRNIKTEFSEYLGVSHKFGMAQALERLGMELQGTHHRGIDDARNITAI 173
>gi|268578591|ref|XP_002644278.1| Hypothetical protein CBG14050 [Caenorhabditis briggsae]
Length = 212
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA-CFQTYVRPTCNQLLSDFC 193
F + +++DFE T D +K+ YP E+I+F V + +LE F +VRP N +LS++C
Sbjct: 8 FDHLLILDFETTSDGEKHDYPFEVIQFSVV---PLDVKLEGIAFNKFVRPVVNPILSNYC 64
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
D TGI+Q ++ T + +WL+ G + A+V S+ D + + + R +
Sbjct: 65 ADFTGIKQEFLNAADTFLVVYKQFLEWLQKNGFQERKLAIVCDSSQDMWRIAQYQFRLVR 124
Query: 254 IWKPPYFNRWINLKVPF---------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
P F +WIN+K F +++ G + N+++ G+ G+AH L D
Sbjct: 125 ETMPSMFRQWINIKRTFDDGLEDGQKNKLVG--KSNIEKMSSYLGIELSGKAHDALSDCL 182
Query: 305 NTARLLALLMHRGFKFSITNSL 326
N A + ++ G +I L
Sbjct: 183 NIAAITQKILEIGCPVTINEML 204
>gi|162312186|ref|XP_001713129.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe
972h-]
gi|121732820|sp|Q08I43.1|ERI1_SCHPO RecName: Full=3'-5' exonuclease eri1; AltName: Full=Enhanced RNAi
protein
gi|115345157|emb|CAL48264.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe]
Length = 313
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 23/230 (10%)
Query: 135 FQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+Y +++D EATC++ + EIIE P ++ + + F +YVRP+ N LSD+C
Sbjct: 79 LRYLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYC 138
Query: 194 KDLTGIQQIQVDRGVTLSEA-------LLRHDKWLEN-----------KGIKNT---NFA 232
K LTGIQQ VD+ S+ L +H L K + T N+A
Sbjct: 139 KSLTGIQQCTVDKAPIFSDVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWA 198
Query: 233 VVTWSNWDCRVMLESECRFKKIWKPPYFN-RWINLKVPFHEVFGGVRCNLKEAVEMAGLA 291
WD L + ++ K+ P + +++++ + +V+ R N+ +E GL
Sbjct: 199 WACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQ 258
Query: 292 WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFP 341
++G H G+DDA+N +R++ + +F M +G + +P
Sbjct: 259 FEGSEHRGIDDARNLSRIVKKMCSENVEFECNRWWMEYEKNGWIPNRSYP 308
>gi|268577619|ref|XP_002643792.1| Hypothetical protein CBG02003 [Caenorhabditis briggsae]
Length = 299
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDF 192
F +++DFEATC+KD + YP EII+F ++++ + + F YV+P N L+DF
Sbjct: 9 FDNLLILDFEATCEKDNHDYPSEIIQFSVAVLNTREKIIREDVSFNKYVKPIINPKLTDF 68
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LTGI Q +D+ T E + WLE + +A V S D +
Sbjct: 69 CAELTGIDQDTIDKADTFPEVYDQFTAWLEEHNFQEKRYAFVCESRQDVWRRAHYQFLLN 128
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCN-------LKEAVEMAGLAWQGRAHCGLDDAKN 305
K P F +W+NL + E + +++ + + G+AH + +
Sbjct: 129 KQPLPAIFRQWVNLSFHYREDMRLAQRQDTVHQSFIEKMSAFYDIPFVGQAHNAMSECSF 188
Query: 306 TARLLALLMHRGFKFSITNSL 326
A++ ++ G +I SL
Sbjct: 189 LAKVTKHILDNGKLVTINESL 209
>gi|398989514|ref|ZP_10692753.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
gi|399011217|ref|ZP_10713550.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398118555|gb|EJM08286.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398147409|gb|EJM36118.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
Length = 180
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L+E ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDTAQPLTEVWPAFERWLAQHQTRLEGWA--SWGDYDRKQLLQEWQRLQIDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ K P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 GLSKVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|194767427|ref|XP_001965817.1| GF20552 [Drosophila ananassae]
gi|190618417|gb|EDV33941.1| GF20552 [Drosophila ananassae]
Length = 159
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 201 QIQVDRGVTLSEALLRHDKWLE-------------NKGIKNTNFAVVTWSNWDCRVMLES 247
Q VD GV L AL+ +WL NK N A VTW++WD + L
Sbjct: 9 QKTVDGGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVTWTDWDFGICLAK 68
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
+C K++ K YFN+WI+++ + + CN +A+ GLA++ RAH G+DDAKN
Sbjct: 69 KCTRKRMCKAAYFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLAFERRAHSGIDDAKNLG 128
Query: 308 RLLALLMHRGFKFSITNSL 326
L+ ++ G FSIT L
Sbjct: 129 ALMCTMVSDGALFSITKDL 147
>gi|77460172|ref|YP_349679.1| exonuclease [Pseudomonas fluorescens Pf0-1]
gi|77384175|gb|ABA75688.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 180
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D LSE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWLGQHQTRLEGWA--SWGDYDRKQLLQEWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|341874213|gb|EGT30148.1| CBN-CRN-4 protein [Caenorhabditis brenneri]
Length = 298
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDF 192
F + +++DFE T ++ YP E+I+F V++ T + F YVRP N +LS
Sbjct: 8 FTHLLILDFETTSEEANCDYPFEVIQFSVVVLDVKTNTILENVSFNKYVRPVINPILSKH 67
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C D TGI Q +D T E + WL G FAVV S D + + + +
Sbjct: 68 CADFTGIAQESLDSAATFREVYNQFVNWLNTNGFAERQFAVVCDSRQDMWRIAQYQFKLI 127
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVE------MA---GLAWQGRAHCGLDDA 303
P +F ++++L F R KE +E MA GL GRAH L+D
Sbjct: 128 NATLPSFFRQYVSLWRAFEA--EQDRSGRKELLEKTYIGKMAEYYGLDTTGRAHDSLNDC 185
Query: 304 KNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERI 344
K A ++ ++ G I L+ S W + P I
Sbjct: 186 KTIATIVQKMLATGATIHINEVLVC-----SAVWRKRPAEI 221
>gi|116784275|gb|ABK23281.1| unknown [Picea sitchensis]
Length = 338
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CN 186
+ QPQ+ YF+V+D E EI+EFP V++ + + + F +VRP
Sbjct: 123 NLQPQQVDYFLVLDLEGKV---------EILEFPVVMIDAHSLEFVDAFHRFVRPIKMSE 173
Query: 187 QLLSDFCKDLTG---IQQIQVDRGVTLSEAL------LRHDKWLENKGIKNTNFAVVTWS 237
+ + ++ G + ++ D + +E L LRH + E + A VT
Sbjct: 174 KRVEEYIDGKYGKLRLDRVWHDTSIPFAEMLQQFENWLRHHQLWEKGALTLHRAAFVTCG 233
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
NWD + + +C+ I PPYF WINLK + + + ++ + G H
Sbjct: 234 NWDVKTKIPEQCQVSGIKLPPYFMEWINLKDVYLNFYNHRAAGMMAMLKGLSMPIIGSHH 293
Query: 298 CGLDDAKNTARLLALLMHRGFKFSIT 323
G+DDA+N R+L ++ G IT
Sbjct: 294 VGIDDAQNITRILQRMLVDGALMQIT 319
>gi|393245393|gb|EJD52903.1| hypothetical protein AURDEDRAFT_133758 [Auricularia delicata
TFB-10046 SS5]
Length = 318
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS--SVTGQLEA----CFQTYVRPTC 185
Q + YF V+D EATC + + +P EIIE+P V++ G+ E F++YVRP
Sbjct: 60 QIYDYFCVLDVEATCVEGTDLGWPNEIIEWPVVLLGWEEHDGRTELRCVDTFRSYVRPQY 119
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV------TWSNW 239
LSDFC LTGIQQ VD L ++L G+ N N + T + +
Sbjct: 120 RPKLSDFCTRLTGIQQSDVDGAPIFRNVLKDFQQFLRKNGLVNKNGKKICRWIWCTDTPY 179
Query: 240 DCRVMLESECRFKKIWKPPYF-NRWINLKVPFHEVFGGV--------RCNLKEAV----- 285
D R + +C I PPY I++++ + V R N AV
Sbjct: 180 DIRDFVAKQCFISAIPHPPYLMGDIIDVRMAVRDYLDRVNSRAARKGRQNRPYAVTSLRV 239
Query: 286 ----EMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+ GL ++GR H G+DD +N AR++ L+ RG
Sbjct: 240 PTQLQALGLGPFEGREHSGIDDTRNIARIVVRLVERGVAL 279
>gi|359463339|ref|ZP_09251902.1| exonuclease [Acaryochloris sp. CCMEE 5410]
Length = 183
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+Y++++D EATC D N P+ E+IE +V+++S T Q+E+ +QT+++P + +L++F
Sbjct: 6 KYYLIVDLEATC-ADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEF 64
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK LT I Q ++ AL W G ++ +W ++D R +C+
Sbjct: 65 CKSLTSISQQDIEEAPLFPVALKDFQSWFYPCG----SYRFCSWGDYD-RHQFVQDCQLH 119
Query: 253 KIWKPPYFNRWINLKVPFH-EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+ +NLK F E+ + + A+ GL +G H G+DDA+N AR++
Sbjct: 120 GVGY-PFPGDHLNLKQAFSIEINSKKKFGMAGALAKLGLELEGVHHRGIDDARNIARIV 177
>gi|225461547|ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140 [Vitis vinifera]
Length = 319
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQ 187
Q Q +F+V+D E EI+EFP +++++ T + F +VRP+ Q
Sbjct: 103 LQSQHLDFFLVLDLEGKI---------EILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQ 153
Query: 188 LLSDFCKDL---TGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWS 237
++++ + G+ ++ D + E L +H W + G + A VT
Sbjct: 154 RINEYIEGKYGKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCG 213
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
NWD + + +C+ K+ PPYF WINLK + + + ++ + G H
Sbjct: 214 NWDLKTKVPQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELQIPLLGSHH 273
Query: 298 CGLDDAKNTARLLALLMHRGFKFSIT 323
G+DD KN AR+L ++ G IT
Sbjct: 274 LGIDDTKNIARVLQRMLADGALLQIT 299
>gi|398880744|ref|ZP_10635767.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398884650|ref|ZP_10639578.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
gi|398191514|gb|EJM78703.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398193862|gb|EJM80954.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
Length = 180
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-QGREQDHFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L+E ++WL + +A +W ++D R +L+ R +
Sbjct: 62 LTRITQANIDSAQALTEVWPVFERWLGQHHSRLEGWA--SWGDYDRRQLLQEWERLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
++ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 QLSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LIL 178
>gi|310641105|ref|YP_003945863.1| 3'-5' exonuclease [Paenibacillus polymyxa SC2]
gi|386040175|ref|YP_005959129.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
gi|309246055|gb|ADO55622.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
gi|343096213|emb|CCC84422.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
Length = 177
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+++ D EATC ++ EIIE +V V+ V ++ FQT+++P N LSDFCK LT
Sbjct: 3 YIIFDLEATCWENDRTRQNEIIEIGAVKVN-VNLEIIGEFQTFIKPKLNPQLSDFCKSLT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q +D +A+ + +W I + + +W +D + L+ +C KI +
Sbjct: 62 SISQQDIDMATYFPQAIYKFQEW-----IGKEPYYLCSWGFYD-KSQLKKDCELHKI-RT 114
Query: 258 PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
+ I++K ++ G R ++ A++M L +G H G+DDAKN +R+ + R
Sbjct: 115 EWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISRIFVKIFDR 174
>gi|255564549|ref|XP_002523270.1| exonuclease, putative [Ricinus communis]
gi|223537483|gb|EEF39109.1| exonuclease, putative [Ricinus communis]
Length = 329
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 124 PAHPYDFQ---PQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTY 180
P + DF+ PQ+F++F+V D E EI+EFP +I+ + T F +
Sbjct: 103 PVNAADFKRKRPQDFEFFLVFDLEGKV---------EILEFPVLIIDAKTMAFVDLFHRF 153
Query: 181 VRPTC--NQLLSDFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKN 228
VRP+ Q ++++ ++ G + ++ D + +E L H W + G
Sbjct: 154 VRPSAMSEQRINEYIENKYGKFGVDRVWHDTALPFNEVIQEFEAWLTHHHLWEKKHGGHL 213
Query: 229 TNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVE 286
A VT NWD + + +C KI P YF WINLK + + + ++ ++
Sbjct: 214 NRAAFVTCGNWDVKTQIPRQCTVSKIKLPRYFMEWINLKDVYQNFYNPKQEARGMRTMMQ 273
Query: 287 MAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
+ G H G+DD KN AR+L ++ G IT
Sbjct: 274 QLKIPMLGSHHLGIDDTKNVARILQRMLADGAVIPIT 310
>gi|222641267|gb|EEE69399.1| hypothetical protein OsJ_28756 [Oryza sativa Japonica Group]
Length = 335
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQLLS 190
Q+ YF+V+D E EI+EFP V++ + + + F +V PT Q +
Sbjct: 123 QKLDYFLVLDLEGKV---------EILEFPVVMIDAQSMEFVDSFHRFVHPTAMSEQRIR 173
Query: 191 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEN-------KGIKNTNFAVVTWSNWD 240
++ + G + ++ D + E L + W+E+ +G + A +T NWD
Sbjct: 174 EYIEGKYGKFGVDRVWHDTAIPFMEVLQEFEDWIEHHKFWKKEQGGALNSAAFITCGNWD 233
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
+ + +CR KI P YF WINLK + + + + + G H G+
Sbjct: 234 LKTKVPEQCRVSKIKLPSYFMEWINLKDIYLNFYNRRATGMMTMMRELQMPIVGSHHLGI 293
Query: 301 DDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
DDAKN AR++ ++ G IT T D
Sbjct: 294 DDAKNIARVVQRMLADGAVMQITAKRQSATGD 325
>gi|398977520|ref|ZP_10687191.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
gi|398137953|gb|EJM26988.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
Length = 180
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D LSE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWLGQHQTRLEGWA--SWGDYDRKQLLQEWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 VLSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|299753899|ref|XP_001833615.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
gi|298410514|gb|EAU88160.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
Length = 389
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS-------SVTGQLEAC--FQTYVR 182
Q F F+V+D E TCD+ + +P EIIEFP +++ +LE F+++VR
Sbjct: 138 QLFDMFLVLDIEGTCDQGSDLDFPNEIIEFPVCLLTWNDKGQDMSASELEVIDEFRSFVR 197
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN------TNFAVVTW 236
PT +L+DFCKDLTGI Q QVD T E L + + +++ G+ N F T
Sbjct: 198 PTWRPVLTDFCKDLTGITQEQVDSAPTFPEVLAQFEAFIKKNGLINDEGEPLVRFCWCTD 257
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWI-------------------------NLKVPFH 271
+D + + +C K+ P + + N+ VP
Sbjct: 258 GPFDIQNFIIKQCFISKLPLPWWLKGNVLDVRTLVQHYVAKQTRSNHGHRGRSNVTVPSR 317
Query: 272 EVFGGVRCNLKEAVEMAGL-AWQGRAHCGLDDAKNTARLLALLMHRG 317
N+ +++ L +QGR H G+DD +N AR+L L RG
Sbjct: 318 RSL-----NIPAQLKVLELQEFQGRQHSGIDDTRNIARILVELGKRG 359
>gi|218198144|gb|EEC80571.1| hypothetical protein OsI_22899 [Oryza sativa Indica Group]
Length = 335
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQLLS 190
Q+ YF+V+D E EI+EFP V++ + + + F +V PT Q +
Sbjct: 123 QKLDYFLVLDLEGKV---------EILEFPVVMIDAQSMEFVDSFHRFVHPTVMSEQRIR 173
Query: 191 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEN-------KGIKNTNFAVVTWSNWD 240
++ + G + ++ D + E L + W+E+ +G + A +T NWD
Sbjct: 174 EYIEGKYGKFGVDRVWHDTAIPFMEVLQEFEDWIEHHKFWKKEQGGALNSAAFITCGNWD 233
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
+ + +CR KI P YF WINLK + + + + + G H G+
Sbjct: 234 LKTKVPEQCRVSKIKLPSYFMEWINLKDIYLNFYSRRATGMMTMMRELQMPIVGSHHLGI 293
Query: 301 DDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
DDAKN AR++ ++ G IT T D
Sbjct: 294 DDAKNIARVVQRMLADGAVMQITAKRQSATGD 325
>gi|302142955|emb|CBI20250.3| unnamed protein product [Vitis vinifera]
Length = 256
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQ 187
Q Q +F+V+D E EI+EFP +++++ T + F +VRP+ Q
Sbjct: 40 LQSQHLDFFLVLDLEGKI---------EILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQ 90
Query: 188 LLSDFCKDL---TGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWS 237
++++ + G+ ++ D + E L +H W + G + A VT
Sbjct: 91 RINEYIEGKYGKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCG 150
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
NWD + + +C+ K+ PPYF WINLK + + + ++ + G H
Sbjct: 151 NWDLKTKVPQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELQIPLLGSHH 210
Query: 298 CGLDDAKNTARLLALLMHRGFKFSIT 323
G+DD KN AR+L ++ G IT
Sbjct: 211 LGIDDTKNIARVLQRMLADGALLQIT 236
>gi|398855281|ref|ZP_10611778.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
gi|398232129|gb|EJN18105.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
Length = 180
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L+E ++WL + +A +W ++D + +L+ R
Sbjct: 62 LTHITQANIDSAQPLTEVWPAFERWLAQHQPRLEGWA--SWGDYDRKQLLQEWQRLNIDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ K P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 GLSKVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|330503165|ref|YP_004380034.1| exonuclease [Pseudomonas mendocina NK-01]
gi|328917451|gb|AEB58282.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas mendocina
NK-01]
Length = 182
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 24/189 (12%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V V G FQ V+P L+DFC++
Sbjct: 3 HWLVIDLEATTDEGGWPMEEMEIIEIGASLVG-VDGHERDHFQRIVKPQRRPCLTDFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD--CRVMLESECRFKK 253
LT I Q VD + + + ++WL + +V WS+W R LE E
Sbjct: 62 LTHITQSDVDSAAPMPQVWAQFERWLTQHAPR-----LVGWSSWGDYDRRQLEQE----- 111
Query: 254 IWKPPYFNRWINLKVP---FHEVFGGVR-----CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
W+ + N ++ +VP + F R L A+++AG+ +QG+ H L+DA+N
Sbjct: 112 -WRQHHLNSLLS-EVPHLNLKQAFAKARQLQRPIGLHSALQLAGMQFQGQQHRALEDARN 169
Query: 306 TARLLALLM 314
TARLL L++
Sbjct: 170 TARLLPLVL 178
>gi|409427189|ref|ZP_11261714.1| exonuclease [Pseudomonas sp. HYS]
Length = 183
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P EIIE + +V G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTDMEIIEIGAALVDR-KGREVGHFQRFVRPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK-- 253
LT I Q VD T ++ + ++WLE+ + V+W ++D + +L+ +++
Sbjct: 62 LTHISQANVDTAATFAQVWAQFERWLEHHAGHLEGW--VSWGDYDRKQLLQEWQQYQVHS 119
Query: 254 -IWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ INLK F + R L A+++AGL + GR H L+DA+NTARLL
Sbjct: 120 LLAELPH----INLKQRFAKARQLQRPLGLNGALQLAGLQFSGRQHRALEDARNTARLLP 175
Query: 312 L 312
L
Sbjct: 176 L 176
>gi|17548214|ref|NP_508415.1| Protein CRN-4 [Caenorhabditis elegans]
gi|2496805|sp|Q10905.1|CRN4_CAEEL RecName: Full=Cell death-related nuclease 4; Flags: Precursor
gi|31747257|gb|AAP57300.1| cell death-related nuclease 4 [Caenorhabditis elegans]
gi|351065238|emb|CCD61184.1| Protein CRN-4 [Caenorhabditis elegans]
Length = 298
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQ 187
+Q F +++DFE T D YP E+I+F V ++ + F YV+P N+
Sbjct: 3 YQHCPFDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNR 62
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES 247
L+ C D TGI Q +D T + +WL G++ FA V S D + +
Sbjct: 63 TLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQY 122
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFG-------GVRCNLKEAVEMAGLAWQGRAHCGL 300
+ + I P +F ++INL F N+ + E L GRAH +
Sbjct: 123 QMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAM 182
Query: 301 DDAKNTARLLALLMHRGFKFSITNSL 326
DD N A +L +++ G K ++ L
Sbjct: 183 DDCLNIATILQRMINMGAKVTVNELL 208
>gi|268578587|ref|XP_002644276.1| Hypothetical protein CBG14047 [Caenorhabditis briggsae]
Length = 292
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 15/196 (7%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEA-CFQTYVRPTCNQLLSDFCKD 195
+++DFE T + + + YP E+I+F SV+ V + LE F +VRP N +LS C +
Sbjct: 6 IILDFETTSEGETHDYPFEVIQF-SVVPYDVKAKTILEGHAFNKFVRPVVNPVLSKHCTE 64
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI+Q ++ T + KWL+ G + +FA+V+ S D + + + R +
Sbjct: 65 FTGIKQESLNAADTFLVVYKQFLKWLQKNGFQERHFAIVSDSRQDMWRIAQYQFRLVQET 124
Query: 256 KPPYFNRWINLKVPF---------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
P F +WIN+K F +++ G R N+++ + G+ + GRAH L D
Sbjct: 125 MPSMFRQWINIKRTFDDGLEDGQKNKLVG--RSNMEKMLNYLGIEFSGRAHDALSDCLTL 182
Query: 307 ARLLALLMHRGFKFSI 322
A + ++ G +I
Sbjct: 183 AAITQKILEMGCPVTI 198
>gi|434384994|ref|YP_007095605.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
gi|428015984|gb|AFY92078.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
Length = 192
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 129 DFQPQEFQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+F ++Q+ +V+D EATC D P Q E IE +V+VS+ + FQT+++P +
Sbjct: 3 EFNFDKYQHILVVDLEATCCDLQSIPRHQMETIEIGAVMVSTDNLAIVDEFQTFIKPIRH 62
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
+L++FC LT I Q QV+ T +A+ WL T F +W ++D R L+
Sbjct: 63 PILTEFCLQLTSITQQQVNTAPTFPDAIELWQPWLSQ--FDKTIFG--SWGDYD-RKQLQ 117
Query: 247 SECRFKKIWKP-PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
+ + +I P P + INLK F G R + +A+ + + G H G+DDA+
Sbjct: 118 QDSKHHRIDLPYPVSSHHINLKELFSTAQGLNKRYGMAQALNLVNIDLTGTHHRGIDDAR 177
Query: 305 NTARLLALLMHR 316
N ++LL ++ R
Sbjct: 178 NISKLLPFILGR 189
>gi|219109276|pdb|3CG7|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109277|pdb|3CG7|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109290|pdb|3CM5|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109291|pdb|3CM5|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109292|pdb|3CM6|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
gi|219109293|pdb|3CM6|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
Length = 308
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQ 187
+Q F +++DFE T D YP E+I+F V ++ + F YV+P N+
Sbjct: 13 YQHCPFDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNR 72
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES 247
L+ C D TGI Q +D T + +WL G++ FA V S D + +
Sbjct: 73 TLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQY 132
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFG-------GVRCNLKEAVEMAGLAWQGRAHCGL 300
+ + I P +F ++INL F N+ + E L GRAH +
Sbjct: 133 QMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAM 192
Query: 301 DDAKNTARLLALLMHRGFKFSITNSL 326
DD N A +L +++ G K ++ L
Sbjct: 193 DDCLNIATILQRMINMGAKVTVNELL 218
>gi|172087346|ref|XP_001913215.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
gi|42601342|gb|AAS21368.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ-------------------------------EIIEFPS 163
F + +VIDFEA+C P+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDCENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 164 VIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN 223
V+V+ T ++ + F +V P + LSDFCK LT +++ + + TL E ++ + W ++
Sbjct: 63 VLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 224 KGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCN--- 280
K + T +WD L SE + KKI P W++L+ V
Sbjct: 123 VQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLRAVSRVYLQSVNKKMGH 181
Query: 281 ---LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
L+ + + W+G+ H G+DDA+NTAR LA+ M K + T
Sbjct: 182 IPVLRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLKVTRT 226
>gi|399009452|ref|ZP_10711886.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
gi|398112186|gb|EJM02052.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
Length = 180
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V+ +L+ FQ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPLTDMEIIEIGATLVNREGRELD-HFQRFVRPLRRPMLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q Q+D LSE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQAQIDGAQPLSEVWPLFERWLGQHHTRLEGWA--SWGDYDRKQLLQEWQRSQLHS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALAQLPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LIL 178
>gi|268571701|ref|XP_002648789.1| Hypothetical protein CBG11812 [Caenorhabditis briggsae]
Length = 302
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL---EACFQTYVRPTCNQLLSD 191
F +++DFE TC++ +P EII+ SV+V ++T +L + F V+P NQ LS
Sbjct: 9 FDDLLILDFETTCEEGVFDHPVEIIQM-SVVVLNITDKLIREDVVFNKLVKPVVNQKLSQ 67
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
+C +LTGIQQ VD+ S + +WL+ + FA D + + +
Sbjct: 68 YCIELTGIQQDAVDKADIFSVVYQQFLEWLKKHNLDERKFAFACDGRQDMWRLAQYQFLL 127
Query: 252 KKIWKPPYFNRWINLKVPFHEV-------FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
K P F +WIN+ F ++ G R NL++ + ++G AH +DD K
Sbjct: 128 IKENFPAIFRQWININRIFQDIAKEKYLSIAG-RSNLEKMSNFFEIKFEGHAHNAMDDVK 186
Query: 305 NTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERI 344
A++ ++ G +F N +T + W PE I
Sbjct: 187 FLAQVAKKILDTG-RFVTVN----ETLNCISGWRNVPENI 221
>gi|168056660|ref|XP_001780337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668285|gb|EDQ54896.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+ Q F++++V+D E EI+EFP +++++ T ++ F +VRP +
Sbjct: 40 KEQPFEFYLVLDLEGRV---------EILEFPVLLINAQTLEVVDRFHRFVRPVIMTEER 90
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLENKGIKN-------TNFAVVTWSN 238
+++ K G + ++ D + +E L + W+E+ + N T A VT N
Sbjct: 91 QAEYIKGKYGRWGLDRVWHDTAIPFTEVLNAFESWMESHSLYNPEDPSKLTRAAFVTCGN 150
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +CR I PYFN WINLK ++ + + ++ + G H
Sbjct: 151 WDVKTKIPEQCRDSGIELKPYFNEWINLKDIYYNFYRRRAGGMLAMLKGLNIPLTGTHHV 210
Query: 299 GLDDAKNTARLLALLMHRGFKFSIT 323
GLDDA N A++L ++ G I+
Sbjct: 211 GLDDAHNIAQILQRMLAHGAIVRIS 235
>gi|425900662|ref|ZP_18877253.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883470|gb|EJK99956.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 180
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V+ +L+ FQ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVNREGRELD-HFQRFVRPLRRPMLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q Q+D LSE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQAQIDGAQPLSEVWPLFERWLGQHHTRLEGWA--SWGDYDRKQLLQEWQRSQLHS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALAQLPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LIL 178
>gi|313215127|emb|CBY42833.1| unnamed protein product [Oikopleura dioica]
Length = 604
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EI EFP+V+V+ T ++ + F +V P + LSDFCK LT +++ + + TL E ++
Sbjct: 14 EITEFPAVLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMID 73
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG 276
+ W ++ K + T +WD L SE + KKI P W++L+
Sbjct: 74 FELWTKDVQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLRAVSRVYLQS 132
Query: 277 VRCN------LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
V L+ + + W+G+ H G+DDA+NTAR LA+ M K + T
Sbjct: 133 VNKKMGHIPVLRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLKVTRT 184
>gi|398971024|ref|ZP_10683426.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM30]
gi|398139545|gb|EJM28541.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM30]
Length = 180
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D +SE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDAAQPVSEVWPAFERWLGQHQTRLEGWA--SWGDYDRKQLLQEWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 LLSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|424924148|ref|ZP_18347509.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
gi|404305308|gb|EJZ59270.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
Length = 180
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 10/182 (5%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V G+ + FQ +V+PT LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRA-GREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D LSE ++WL + +A +W ++D + +L+ ++++
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWLGQHQTRLEGWA--SWGDYDRKQLLQE---WQRLQ 116
Query: 256 KPPYFNRW--INLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+R +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL L
Sbjct: 117 LDSVLSRVQHMNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLPL 176
Query: 313 LM 314
++
Sbjct: 177 VL 178
>gi|389681036|ref|ZP_10172381.1| exonuclease family protein [Pseudomonas chlororaphis O6]
gi|388554572|gb|EIM17820.1| exonuclease family protein [Pseudomonas chlororaphis O6]
Length = 180
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V+ +L+ FQ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVNREGRELD-HFQRFVRPLRRPMLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q Q+D LSE ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTRISQAQIDGAQPLSEVWPLFERWLGQHHARLEGWA--SWGDYDRKQLLQEWQRSQLHS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALAQLPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LIL 178
>gi|440682325|ref|YP_007157120.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
gi|428679444|gb|AFZ58210.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
Length = 184
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 137 YFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
YF+++D EATC + + EIIE +V+++ T ++++ FQ +++P + L+ FC
Sbjct: 5 YFLIVDLEATCCNQRTIPRHEMEIIEIGAVMLNRKTWEIDSEFQQFIQPVRHPQLTAFCT 64
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+LT I Q QV+ +E + + +W+++ N F +W N+D L+ +C+F I
Sbjct: 65 ELTSITQQQVESAPLFTEVIPQFKEWIDS--FPNNIFC--SWGNYDKTQFLQ-DCKFHNI 119
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
P+ + N+K F E G + + +A++ G+ QG H G+DDA+N A +
Sbjct: 120 -SYPFGSEHRNIKNEFSEYLGVSHKFGMAQALKHLGMELQGTHHRGIDDARNIAAI 174
>gi|171909847|ref|ZP_02925317.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Verrucomicrobium spinosum DSM 4136]
Length = 200
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 137 YFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ ++ID EATC D+ K P + EIIE +V++ T + + F T+++P + +L+ FC
Sbjct: 14 HLLIIDLEATCCDRGKVPRDEMEIIEIGAVLLDGKTLETVSEFGTFIKPVRHPVLTPFCT 73
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q +VD EAL + WLE + +W +D + + +C F +
Sbjct: 74 KLTTITQAEVDAAPMFPEALAKLKAWLE----PYPDCMFSSWGAYD-KGQFQLDCAFHDL 128
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
P+ +NLK F E G R + +A+ M L +G H G+DDA+N AR++A
Sbjct: 129 PY-PFSEAHLNLKKAFAEARGLKKRPGMGQALGMLRLELEGTHHRGIDDARNMARIVA 185
>gi|422589316|ref|ZP_16663979.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422651554|ref|ZP_16714348.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330876090|gb|EGH10239.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330964631|gb|EGH64891.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 180
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FCK+
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCKE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R ++
Sbjct: 62 LTHINQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYD-RQQLEEEWRHHQLG 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|407365338|ref|ZP_11111870.1| exonuclease [Pseudomonas mandelii JR-1]
Length = 182
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 12/179 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V G+ CFQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGATLVDR-KGREVDCFQCFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q VD TLSE ++WL + +A +W ++D + +L+ R
Sbjct: 62 LTHITQANVDAAQTLSEVWPSFEQWLVRHQSELEGWA--SWGDYDRKQLLQEWQRLHLCS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ K P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 VLEKVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLL 174
>gi|268578589|ref|XP_002644277.1| C. briggsae CBR-CRN-4 protein [Caenorhabditis briggsae]
Length = 298
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEA-CFQTYVRPTCNQLLSD 191
F + +++DFE T YP EII+F SV+ V + LE F +VRP N LS+
Sbjct: 8 FDHLLILDFETTSGGKNRDYPTEIIQF-SVVPLDVKAKTMLEGIAFNKFVRPVINPTLSE 66
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
C +LTGI+Q ++ T + +WL+ G + +FA+V+ S D + + + R
Sbjct: 67 HCAELTGIKQESLNSADTFLVVYKQFLEWLQKNGFQERHFAIVSDSRQDMWRIAQYQFRL 126
Query: 252 KKIWKPPYFNRWINLKVPF--------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+ P F +WIN+K F E G N+++ G+ G+AH L D
Sbjct: 127 VRETMPSMFRQWINIKRTFDDGLEDGQKEKLVGTT-NIEKMSNYLGIELSGKAHDALSDC 185
Query: 304 KNTARLLALLMHRGFKFSITNSL----MWQTNDGSLTWNQFPERIFLPPHQL 351
N A + ++ G +I L +W+ +T + + FL H +
Sbjct: 186 LNIAAITHKILEIGCPVTINEMLCCSAIWRKKPIDMTLHANWKMDFLLAHNI 237
>gi|326426891|gb|EGD72461.1| hypothetical protein PTSG_11592 [Salpingoeca sp. ATCC 50818]
Length = 978
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+ V+DFEATC++D +P EIIEFP VI+ ++ Q Y RP N +LS FC L
Sbjct: 34 FICVVDFEATCEEDDANFPHEIIEFPLVIIDVHRKEIVEKQQFYCRPVFNPILSPFCTQL 93
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSN--WDCRVMLESECRFKKI 254
TGI+Q VD L + L+ + ++ S+ WD R + +CR +
Sbjct: 94 TGIKQESVDSAAEFPHVLDQVMAILDKYRSHDAGHKLLLASDGPWDFRNFFQWQCRASSV 153
Query: 255 WKPPYFNRWINLKVPFHEVFGGVR 278
P ++W++++ F GGV+
Sbjct: 154 PAPALMHQWLDIRKAFRACRGGVK 177
>gi|28869227|ref|NP_791846.1| exonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967497|ref|ZP_03395645.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|301386461|ref|ZP_07234879.1| exonuclease, putative [Pseudomonas syringae pv. tomato Max13]
gi|302059344|ref|ZP_07250885.1| exonuclease, putative [Pseudomonas syringae pv. tomato K40]
gi|302131217|ref|ZP_07257207.1| exonuclease, putative [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422658314|ref|ZP_16720749.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28852468|gb|AAO55541.1| exonuclease, putative [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927798|gb|EEB61345.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|331016942|gb|EGH96998.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 180
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FCK+
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCKE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R ++
Sbjct: 62 LTHISQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYD-RQQLEEEWRRHQLG 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|422298001|ref|ZP_16385624.1| exonuclease [Pseudomonas avellanae BPIC 631]
gi|407990435|gb|EKG32522.1| exonuclease [Pseudomonas avellanae BPIC 631]
Length = 181
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FCK+
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCKE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R ++
Sbjct: 63 LTHINQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYD-RQQLEEEWRHHQLG 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 120 SVLSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|402699837|ref|ZP_10847816.1| exonuclease [Pseudomonas fragi A22]
Length = 180
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ +++ FQ ++RP LL+ FC+
Sbjct: 3 HWLVIDLEATTDDGGWPIEEMEVIEIGASVVTRAGREVD-HFQRFIRPQRRPLLTPFCRH 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D G L + + ++WL K +A +W ++D R LE E + KK+
Sbjct: 62 LTRITQANIDAGAPLPQVWEQFERWLGQHLPKLEGWA--SWGDYD-RKQLEQEWQQKKLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALARLPHMNLKQQFAQARQLKSAPGLNSALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
>gi|118384040|ref|XP_001025173.1| exonuclease family protein [Tetrahymena thermophila]
gi|89306940|gb|EAS04928.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 639
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+FQY IDFE C+ + EIIEFP ++ + ++ F +YV+P+ N ++ F
Sbjct: 412 DFQYLFFIDFE--CNFFNKKF--EIIEFPLHVIDVNSKEIVDSFVSYVKPSNN--ITKFI 465
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLEN---KGIKNTNFAVVTWSNWDC---RVMLES 247
LT I QV L + L+ +LE GI AV+ +DC L +
Sbjct: 466 TRLTKITDTQVKNAPILQQVLVNVQNFLEKYLKVGIDKC--AVI----YDCDSDSTFLFN 519
Query: 248 ECRFKKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
E FKKI PP F ++I LK F E+ +L + +++ + ++G+ HCG DD+ N
Sbjct: 520 ETSFKKIKVPPIFEKYICLKSVFPVEIANKAPSSLSQMLQILDMKFEGQKHCGADDSMNQ 579
Query: 307 ARLLALLMHRGFKFS 321
A++ L+ G+ FS
Sbjct: 580 AKVGQKLLQLGYNFS 594
>gi|170094696|ref|XP_001878569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647023|gb|EDR11268.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 284
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV-------SSVTGQLEAC--FQTYVR 182
Q ++ F+V+D E TCD+ + YP EIIEFP ++ +LE F+TYV+
Sbjct: 35 QPYEVFLVLDIEGTCDQGTDFNYPNEIIEFPVCLMRWKNRTDDDFCSELEVVDEFRTYVK 94
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN----FAVVTWSN 238
P LS FC +LTGI Q QVD + L+ +K+L G+ + A W +
Sbjct: 95 PKWRPTLSKFCTELTGITQAQVDDAPLFPDVLVDLEKFLAKHGLIDEESSEPLARFCWCS 154
Query: 239 ---WDCRVMLESECRFKKIWKPPYFNR---------WINLKVPFHEVFGGVRCNLK---- 282
+D R + +C ++ P + W+ L+ E L
Sbjct: 155 DGPFDVRDFVVKQCFISQVKMPQWIQYSVVDVRKAVWLALQSAQTEQPSTHESELPTIRS 214
Query: 283 -------EAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGF 318
+A+E+ G ++GR H G+DD++N AR++A L RG
Sbjct: 215 LNISAQLQALELPG--FEGRQHSGIDDSRNIARIVAELARRGI 255
>gi|426408384|ref|YP_007028483.1| exonuclease [Pseudomonas sp. UW4]
gi|426266601|gb|AFY18678.1| exonuclease [Pseudomonas sp. UW4]
Length = 180
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRELDQ-FQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L E ++WL N + +A +W ++D + +L+ R
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGNHHTRLEGWA--SWGDYDRKQLLQDWQRLGLVS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 MLANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|195621024|gb|ACG32342.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+PQ+ +Y +++D E EI+EFP +++ + + F +VRPT Q
Sbjct: 116 KPQKLEYLLILDLEGKV---------EILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQR 166
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEN-------KGIKNTNFAVVTWSN 238
+++ + G + ++ D + L + WL N +G A VT N
Sbjct: 167 TTEYIEGKYGKFGVDRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGN 226
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C+ KI P YF WINLK + + + + L G H
Sbjct: 227 WDLKTKVPEQCKVSKINLPTYFMEWINLKDIYLNFYNRRATGMMTMMRELQLPIVGNHHL 286
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
G+DD+KN AR++ ++ G IT T D
Sbjct: 287 GIDDSKNIARVVQRMLADGAVIQITAKRQSATGD 320
>gi|212722758|ref|NP_001131746.1| uncharacterized protein LOC100193112 [Zea mays]
gi|194692414|gb|ACF80291.1| unknown [Zea mays]
gi|413944431|gb|AFW77080.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+PQ+ +Y +++D E EI+EFP +++ + + F +VRPT Q
Sbjct: 116 KPQKLEYLLILDLEGRV---------EILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQR 166
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEN-------KGIKNTNFAVVTWSN 238
+++ + G + ++ D + L + WL N +G A VT N
Sbjct: 167 TTEYIEGKYGKFGVDRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGN 226
Query: 239 WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHC 298
WD + + +C+ KI P YF WINLK + + + + L G H
Sbjct: 227 WDLKTKVPEQCKVSKINLPTYFMEWINLKDIYLNFYNRRATGMMTMMRELQLPIVGNHHL 286
Query: 299 GLDDAKNTARLLALLMHRGFKFSITNSLMWQTND 332
G+DD+KN AR++ ++ G IT T D
Sbjct: 287 GIDDSKNIARVVQRMLADGAVIQITAKRQSATGD 320
>gi|325302616|tpg|DAA34168.1| TPA_inf: hypothetical secreted protein 1605 [Amblyomma variegatum]
Length = 151
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q+F YF+V+DFEATC + K P PQEIIEFP + V+ T + EA F TYV P + L+
Sbjct: 63 QDFDYFLVLDFEATCSQQKGVPSPQEIIEFPVLKVNGSTFETEATFHTYVEPQAHPELTA 122
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKW 220
FC +LTGI Q VD LS+ L D W
Sbjct: 123 FCTELTGIIQDMVDGQPHLSQVLSDFDSW 151
>gi|398935809|ref|ZP_10666681.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
gi|398169104|gb|EJM57098.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
Length = 180
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V +L++ FQ +VRPT LL+ FC+
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGRELDS-FQCFVRPTRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L+E + WL + + V+W ++D + +++ R +
Sbjct: 62 LTHITQANIDAAQPLNEVWASFEHWLGQHHSRLEGW--VSWGDYDRKQLVQEWERLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|289626405|ref|ZP_06459359.1| exonuclease [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289649559|ref|ZP_06480902.1| exonuclease [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581480|ref|ZP_16656622.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422606238|ref|ZP_16678248.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
gi|298159084|gb|EFI00143.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330866329|gb|EGH01038.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330889890|gb|EGH22551.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
Length = 180
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPVLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R+ ++
Sbjct: 62 LTHINQSSIDSAAPLTAVWPQFERWLSHHRARVLGWA--SWGDYD-RQQLEEEWRYHRLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIL 178
>gi|379728457|ref|YP_005320653.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
gi|378574068|gb|AFC23069.1| 3-5 exonuclease eri-1 [Saprospira grandis str. Lewin]
Length = 183
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 138 FVVIDFEATC---DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F++ D EATC D ++ QEIIE +++ + +L++ F+++VRP+ + LSDFC
Sbjct: 3 FIIYDLEATCWKTDVERRGRSQEIIEIGALLFNEY-AELQSRFESFVRPSEHPKLSDFCT 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKK 253
LTGI QI+V++ + W+ G+ K ++ + +W +D R L C+
Sbjct: 62 QLTGISQIEVNQADEFPTVIEDFQDWI---GLTKGEDYLLCSWGFFD-RKALARNCKLHD 117
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + ++ I+LK + + G R LK AVE G ++G H G+DDA N A++
Sbjct: 118 L-PADWTDKHISLKHQYPRIKGIRREIGLKRAVEREGFEFEGAHHRGIDDAINLAKIFV 175
>gi|237797629|ref|ZP_04586090.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020479|gb|EGI00536.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 180
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC+
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPVRRPLLTHFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R ++
Sbjct: 62 LTHISQSNIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYD-RQQLEEEWRHHQLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L+M
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPLGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIM 178
>gi|257484494|ref|ZP_05638535.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422595885|ref|ZP_16670170.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422683913|ref|ZP_16742168.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330986187|gb|EGH84290.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013242|gb|EGH93298.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 180
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPVLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R+ ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYD-RQQLEEEWRYHRLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIL 178
>gi|71736737|ref|YP_274026.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|416017607|ref|ZP_11564687.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|416026040|ref|ZP_11569614.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|71557290|gb|AAZ36501.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323478|gb|EFW79563.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|320329479|gb|EFW85471.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 180
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPVLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R+ ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYD-RQQLEEEWRYHRLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFAGQQHRALVDARNTARLLPLIL 178
>gi|158341366|ref|YP_001522531.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158311607|gb|ABW33217.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 194
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y++++D EATC + P+ + E IE +VIV SV ++ F +++P + L+DF
Sbjct: 8 YDYYLIVDLEATCCNTFSIPHKETETIEIGAVIVESVGLEIIDEFTVFIKPIRHPKLTDF 67
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LT I+Q ++ T +A+ +W E + N +W ++D + LE E ++
Sbjct: 68 CTELTTIKQTDLEDAPTFPQAVGTFKRWFE----QYENSVFCSWGDYD-KNQLERESKYH 122
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
KI P NLK F + + +A+ GL+ G H G+DDA+N A+L+
Sbjct: 123 KI-PYPMGEEHFNLKKQFSLALRTKKHYGMAKALMTVGLSLDGTHHRGIDDARNLAKLMP 181
Query: 312 LLMHR 316
++ R
Sbjct: 182 FIIGR 186
>gi|162449255|ref|YP_001611622.1| exonuclease [Sorangium cellulosum So ce56]
gi|161159837|emb|CAN91142.1| predicted exonuclease [Sorangium cellulosum So ce56]
Length = 191
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+F+VID EATCD++ P+ EIIE +V+V T + + T+VRP L++FC
Sbjct: 7 FFLVIDLEATCDEEGR-IPERIMEIIEIGAVLVDGATLEPVSELATFVRPVIRPRLTEFC 65
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
LT I Q VD T EA+ +++ G + F +W ++D + R
Sbjct: 66 TKLTTITQADVDAAPTFPEAIAALGRFV---GQREALFC--SWGDYDRKQFEIDAAR--- 117
Query: 254 IWKPPY-FNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
W P +N+K F G R + A+E GL G H G+DDA+N AR+L
Sbjct: 118 -WGVPLPLQGHMNIKKRFSAALGVTQRYGMASALERLGLPLHGTHHRGIDDARNIARILP 176
Query: 312 LLMHR 316
+ R
Sbjct: 177 YAIGR 181
>gi|302185096|ref|ZP_07261769.1| exonuclease [Pseudomonas syringae pv. syringae 642]
Length = 180
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSGMPHINLKQRFAQARQLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|156395505|ref|XP_001637151.1| predicted protein [Nematostella vectensis]
gi|156224261|gb|EDO45088.1| predicted protein [Nematostella vectensis]
Length = 151
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 77/192 (40%), Gaps = 52/192 (27%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F Y++V+DFEATCD P PQEIIEFP V+S T Q EA F YV PT + L+ FC
Sbjct: 12 FDYYLVLDFEATCDDKNKPKPQEIIEFPVTKVNSRTLQTEAEFHQYVCPTAHPKLTTFCT 71
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
DLTGI Q V+ L L +V + + KI
Sbjct: 72 DLTGITQDMVEGKPDLQTTL---------------------------QVYSDVMGKQSKI 104
Query: 255 WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P + GL GR H G+DDA+N ++L L
Sbjct: 105 GMPGMLHGL-------------------------GLELVGRHHSGIDDARNITKILVALA 139
Query: 315 HRGFKFSITNSL 326
+ S T +
Sbjct: 140 RKHPNISATGKM 151
>gi|424840756|ref|ZP_18265381.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Saprospira grandis DSM 2844]
gi|395318954|gb|EJF51875.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Saprospira grandis DSM 2844]
Length = 183
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 138 FVVIDFEATC---DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F++ D EATC D ++ QEIIE +++ + +L++ F+++VRP+ + LSDFC
Sbjct: 3 FIIYDLEATCWKTDLERRGRSQEIIEIGALLFNEY-AELQSRFESFVRPSEHPQLSDFCT 61
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKK 253
LTGI QI+V++ + + W+ G+ K ++ + +W +D R C+
Sbjct: 62 QLTGISQIEVNQADEFPQVIEDFQDWI---GLTKGEDYLLCSWGFFD-RKAFARNCKLHD 117
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + ++ I+LK + + G R LK AVE G ++G H G+DDA N A++
Sbjct: 118 L-PADWTDKHISLKHQYPRIKGIRREIGLKRAVEREGFEFEGAHHRGIDDAINLAKIFV 175
>gi|66045076|ref|YP_234917.1| exonuclease [Pseudomonas syringae pv. syringae B728a]
gi|63255783|gb|AAY36879.1| Exonuclease [Pseudomonas syringae pv. syringae B728a]
Length = 181
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPIGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|424071559|ref|ZP_17808982.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443644642|ref|ZP_21128492.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
gi|407998647|gb|EKG39048.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443284659|gb|ELS43664.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
Length = 181
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|422675576|ref|ZP_16734919.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
gi|330973293|gb|EGH73359.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
Length = 180
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPIGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|289679622|ref|ZP_06500512.1| exonuclease [Pseudomonas syringae pv. syringae FF5]
gi|422617306|ref|ZP_16686009.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|422669598|ref|ZP_16729442.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440721500|ref|ZP_20901897.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440724547|ref|ZP_20904827.1| exonuclease [Pseudomonas syringae BRIP34881]
gi|330897689|gb|EGH29108.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|330981951|gb|EGH80054.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440363363|gb|ELQ00531.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440369840|gb|ELQ06794.1| exonuclease [Pseudomonas syringae BRIP34881]
Length = 180
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|398867001|ref|ZP_10622473.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
gi|398238581|gb|EJN24307.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
Length = 180
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPITEMEIIEIGATLVDHKGRELD-FFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D + E ++WL + + V+W ++D + +L+ R
Sbjct: 62 LTHITQANIDAAQPMGEVWAAFERWLGQHHPRLEGW--VSWGDYDRKQLLQDWQRLALDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALSQVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFSGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|70731551|ref|YP_261292.1| exonuclease [Pseudomonas protegens Pf-5]
gi|68345850|gb|AAY93456.1| exonuclease family protein [Pseudomonas protegens Pf-5]
Length = 179
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ + FQ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVSEMEIIEIGATLVNR-QGREQDHFQRFVRPLRRPMLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D LSE ++WL + +A +W ++D R L+ E +++
Sbjct: 62 LTHITQANIDSAAPLSEVWGLFERWLGQHQPRLEGWA--SWGDYD-RKQLQLEWHNQQLH 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + R L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SLLNEVPHMNLKQRFAKARRLERPLGLNAALQLAGMQFTGQQHRALEDARNTARLLPLIL 178
>gi|162457127|ref|YP_001619494.1| hypothetical protein sce8842 [Sorangium cellulosum So ce56]
gi|161167709|emb|CAN99014.1| Hypothetical protein T07A9.5a [Sorangium cellulosum So ce56]
Length = 214
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
+++VID EATC D + +P+ EIIE +V+V + T + A Q +VRP + LS
Sbjct: 4 LTHYLVIDLEATCSDDPS-FPRDEMEIIEVGAVLVDAGTLRPAAELQCFVRPIRHPRLSA 62
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FC LT I+Q VD A R + ++ +W +D R LE + R
Sbjct: 63 FCMRLTSIRQADVDAAPRFPAAAARLREL-----VRGRQALFCSWGGYDKR-QLERDARR 116
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+ +NLK F G R + +A+ GL++QG H +DDA+N ARLL
Sbjct: 117 HGVAL-PFGGDHLNLKRAFARRLGAERELGVGQALRRVGLSFQGTQHRAIDDARNIARLL 175
>gi|239988372|ref|ZP_04709036.1| hypothetical protein SrosN1_13780 [Streptomyces roseosporus NRRL
11379]
gi|291445358|ref|ZP_06584748.1| exonuclease [Streptomyces roseosporus NRRL 15998]
gi|291348305|gb|EFE75209.1| exonuclease [Streptomyces roseosporus NRRL 15998]
Length = 202
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 125 AHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVR 182
A P D ++ V+D EATC + + P Q EIIE +V G+ A + VR
Sbjct: 10 ARPMDMGERDAYLLNVVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVR 69
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR 242
P +++ S FC +LTG+ Q +VD G+ +EA R G+ +W ++D R
Sbjct: 70 PARSKV-SPFCTELTGLTQTEVDGGLPFAEAC-RVLAAEHRTGL----LPWASWGDYD-R 122
Query: 243 VMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLD 301
+CR P+ R N K F +G R + +A+E AGL +GR H G D
Sbjct: 123 NQFTRQCRATGT-AYPFGQRHTNAKATFTAAYGLRRRPGMAQALETAGLPLEGRHHRGDD 181
Query: 302 DAKNTARLLALLMHRG 317
DA N A L+ LM RG
Sbjct: 182 DAWNIAALVLDLMGRG 197
>gi|71397756|ref|XP_802533.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70863734|gb|EAN81087.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 210
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIEFP V+V + A F +V+P N LS+FC+ LTGI+Q +D + L + + R
Sbjct: 2 EIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSEFCRQLTGIRQEDIDNALPLEDVIRR 61
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCR--VMLESECRFKKIWKPPYFNRWINLKVPFHEVF 274
++W + + T D + + + S R + I P F +WI++K F F
Sbjct: 62 FERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVSR-QGIRFPSMFYQWIDVKRFFAHFF 120
Query: 275 GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+ +K ++ ++GR H G+DDA+N A ++ ++ G F
Sbjct: 121 QCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATIVIRMLKLGCSF 166
>gi|104780960|ref|YP_607458.1| exonuclease [Pseudomonas entomophila L48]
gi|95109947|emb|CAK14652.1| putative exonuclease [Pseudomonas entomophila L48]
Length = 183
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI- 254
LT I Q VD SE + ++WL N + A V+W ++D + +L+ E + +
Sbjct: 62 LTHISQADVDNATPFSEVWGQFERWLVNHQAQLQ--AWVSWGDYDRKQLLQ-EWQVHHVD 118
Query: 255 ---WKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
K P+ INLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 119 SLLLKLPH----INLKQRFAKARHLQRPAGLNSALQLAGLQFSGQQHRALEDARNTARLL 174
Query: 311 ALLMHRG 317
L + G
Sbjct: 175 PLSLPVG 181
>gi|398871585|ref|ZP_10626899.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
gi|398206141|gb|EJM92914.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
Length = 180
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRELD-HFQRFVRPVRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L E ++WL + + V+W ++D + +L+ R +
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGQHHTRLEGW--VSWGDYDRKQLLQEWQRLELAS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 VLANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|422647744|ref|ZP_16710871.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961285|gb|EGH61545.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 180
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPVRRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R ++
Sbjct: 62 LTHITQSNIDSAAPLTAVWPQFERWLAHHRARVVGWA--SWGDYD-RQQLEEEWRNHQLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPLGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|398911049|ref|ZP_10655333.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
gi|398184779|gb|EJM72213.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
Length = 180
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRELD-YFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L E ++WL + + V+W ++D + +L+ R
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGQHHTRLEGW--VSWGDYDRKQLLQEWQRLGLAS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|398861884|ref|ZP_10617498.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
gi|398231498|gb|EJN17485.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
Length = 182
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V GQ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-KGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L++ ++WL + +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDASQPLTDVWPLFERWLGQHHARLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLP 175
Query: 312 LL 313
L+
Sbjct: 176 LV 177
>gi|398930885|ref|ZP_10664851.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398164575|gb|EJM52708.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 180
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRELD-HFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L E ++WL + + V+W ++D + +L+ R
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGQHHTRLEGW--VSWGDYDRKQLLQEWQRLGLTS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|449456609|ref|XP_004146041.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
gi|449510343|ref|XP_004163638.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
Length = 325
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 190
Q+F YF+V+D E EIIEFP ++V++ T + F +VRP+ Q ++
Sbjct: 113 QDFDYFLVLDLEGKV---------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRIN 163
Query: 191 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVVTWSNWD 240
++ + G + ++ D + + L++H W + G A VT NWD
Sbjct: 164 EYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWD 223
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
+ + +C K+ P YF WIN+K + + + + + G H G+
Sbjct: 224 IKTQVPHQCSVSKMKLPDYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGI 283
Query: 301 DDAKNTARLLALLMHRGFKFSIT 323
DD KN R+L ++ G +T
Sbjct: 284 DDTKNIVRVLQRMVGDGAHLQVT 306
>gi|366165230|ref|ZP_09464985.1| 3-5 exonuclease eri-1 [Acetivibrio cellulolyticus CD2]
Length = 182
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQTYVRPTCNQLLSDFCKD 195
+++ D EATC ++ EIIE +V + +LE F +++P +LSDFC
Sbjct: 3 YIIFDLEATCWENDKSKTSEIIEIGAV---KLNDRLEVVDTFSKFIKPAIYPVLSDFCIR 59
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I+Q VD ++ + W+ + +T A+ +W +D + + EC K
Sbjct: 60 LTSIEQKDVDTADIFKNVMVEFENWITSS---DTEVALCSWGFYD-KKQIYKECEVKNYS 115
Query: 256 KPPY--FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ ++ I++K F E+ G C + A+++ GL +G H G+DDAKN ++ +
Sbjct: 116 GRIHSLLDKHISIKHQFAEIKGISPCGMSRALDLLGLPLEGTHHRGIDDAKNITKIFVAV 175
Query: 314 MHR 316
+
Sbjct: 176 FDK 178
>gi|398952007|ref|ZP_10674469.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM33]
gi|398155504|gb|EJM43943.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM33]
Length = 180
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRELDQ-FQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L E ++WL + + + V+W ++D + +L+ R
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGHHHTRLEGW--VSWGDYDRKQLLQEWQRLGLAS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 VLANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|312962237|ref|ZP_07776729.1| exonuclease [Pseudomonas fluorescens WH6]
gi|311283574|gb|EFQ62163.1| exonuclease [Pseudomonas fluorescens WH6]
Length = 180
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D RV LE E + +
Sbjct: 62 LTHITQANIDAAAPVTEVWPLFERWLGQHQARLEGWA--SWGDYD-RVQLELEWQRHGLA 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALADTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|392595926|gb|EIW85249.1| hypothetical protein CONPUDRAFT_141905 [Coniophora puteana
RWD-64-598 SS2]
Length = 328
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS----SVTGQLEAC-----FQTYVR 182
Q + F+V+D EATC + N +P EIIE+P ++ S +G+ F+++V+
Sbjct: 78 QPYDVFLVLDVEATCKQGSNFEWPNEIIEWPVCVMKWKDKSPSGKARELSVVDEFRSFVQ 137
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN----FAVVTWSN 238
PT LS FC DLTGI Q Q+ T L K+L G+ + A W +
Sbjct: 138 PTWRPQLSQFCTDLTGITQDQIKDAPTFPRVLKHFSKFLAEHGLIDPKNGRPVARFCWCS 197
Query: 239 ---WDCRVMLESECRFKKIWKPPYFN-------RWINLKVPFHEVFGGVR---------- 278
+D R + +C KI P + R +++ HE G +
Sbjct: 198 DGPFDIRDFVVKQCFISKIPMPIWLKGDVMDVRRVVSMVAQPHE--GSYKRNTRHSANVN 255
Query: 279 ---CNLKEAVEMAGL-AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
N+ + + + GL A+QGR H G+DD++N AR++A L R +
Sbjct: 256 YFPFNISQQLRVLGLPAFQGRLHSGIDDSRNLARIIAELARRDIRL 301
>gi|402225629|gb|EJU05690.1| hypothetical protein DACRYDRAFT_75019 [Dacryopinax sp. DJM-731 SS1]
Length = 497
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 66/258 (25%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS----SVTGQLE-----ACFQT 179
F+ Q + F+++D EATCD+ YP EIIE+P V++ +G++ A F++
Sbjct: 141 FRRQPYDAFLLLDVEATCDEGVGFDYPNEIIEWPVVLMRWNEMDTSGRMASLTPFAEFRS 200
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKN-------TNFA 232
+VRPT L+ FC LTGI Q ++ T E L + ++L G+ + +
Sbjct: 201 FVRPTWATQLTPFCTSLTGITQSHINNAPTFPEVLAQFREFLVLHGLLDPETDEQLVRYT 260
Query: 233 VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLK---------- 282
VT WD R L +C I P W+ +V +V VR L+
Sbjct: 261 FVTDGPWDLRDFLVKQCWLSDIPVP----AWVGQEV--VDVRQLVRVALRTFDETDPDTE 314
Query: 283 ---------------------EAVEMAGLA------------WQGRAHCGLDDAKNTARL 309
+ GL+ +QGR H G+DDA+N AR+
Sbjct: 315 PEPEPEPEPAQPEGEPERERERGTKHTGLSLPCQLHNLSLPPFQGRQHSGIDDARNVARV 374
Query: 310 LALLMHRGFKFSITNSLM 327
L L RG+ +SLM
Sbjct: 375 LQELARRGWVVERNSSLM 392
>gi|422642046|ref|ZP_16705466.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440746649|ref|ZP_20925929.1| exonuclease [Pseudomonas syringae BRIP39023]
gi|330954430|gb|EGH54690.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440370909|gb|ELQ07774.1| exonuclease [Pseudomonas syringae BRIP39023]
Length = 180
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPARRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRQHHLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|118397287|ref|XP_001030977.1| exonuclease family protein [Tetrahymena thermophila]
gi|89285297|gb|EAR83314.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1047
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 102/191 (53%), Gaps = 18/191 (9%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
Y VIDFE C++ + EIIEFP +V ++ F +YVRPT + LS+F K L
Sbjct: 200 YLFVIDFE--CNQPGS----EIIEFPITVVDLKQRKVVDTFHSYVRPTKIKKLSNFIKKL 253
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC---RVMLESECRFKK 253
TGI+Q VD ++ + R + +L + + A++ +DC L +E + K+
Sbjct: 254 TGIKQEDVDASESIETIITRVEAFLS--KYQQSKAAIL----YDCANDAKFLSNEIKNKQ 307
Query: 254 I-WKPPYFNRWINLKVPFH-EVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + +INL+ F + GG++ +L A+E+ ++++G+ H G DD+ N AR+
Sbjct: 308 LNITNKFLLSYINLRNVFPINLTGGIKNISLSHALEVLDMSFEGQKHTGRDDSINIARVC 367
Query: 311 ALLMHRGFKFS 321
+++ F F+
Sbjct: 368 MEMINHQFTFT 378
>gi|358059444|dbj|GAA94850.1| hypothetical protein E5Q_01504 [Mixia osmundae IAM 14324]
Length = 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 134 EFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIV-----------SSVTGQLE----ACF 177
++ ++V D EATC D +P EIIE P ++ + + E A F
Sbjct: 79 DYDAYLVCDVEATCEDGAGYTFPNEIIELPITMLRWRKCEPRRTLKKILNEWELYVHAEF 138
Query: 178 QTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTN---FAVV 234
TYV+PT N+ LS +C+DLTGI Q QVDR + EAL W+ GI+ +
Sbjct: 139 HTYVQPTWNKTLSKYCEDLTGISQAQVDRAPSWREALKLLSDWVLAHGIQGKGKLKSCFI 198
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYFN-RWINLKVPFHEVF-----------------GG 276
T WD R + C + PP R+I+L++ F
Sbjct: 199 TDGPWDLRDFVPKTCWINGVSVPPMMTERYIDLRLCAATYFKIQPKLDSARALRIPHRKP 258
Query: 277 VRCNLKEAVEMAGL-AWQGRAHCGLDDAKNTARLL 310
R ++ ++ GL ++GR H G D +NTAR++
Sbjct: 259 DRMDVPSLLDALGLPPFEGRQHSGRADTRNTARVV 293
>gi|398837808|ref|ZP_10595096.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
gi|398117960|gb|EJM07702.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
Length = 182
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V GQ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-KGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L++ ++WL +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDASQPLTDVWPLFERWLGQHHASLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLP 175
Query: 312 LL 313
L+
Sbjct: 176 LV 177
>gi|302755252|ref|XP_002961050.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
gi|300171989|gb|EFJ38589.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
Length = 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 121 MLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTY 180
+L A P QP F F+V+D E EI+EFP V++ + T + F +
Sbjct: 37 VLDAARPLPRQP--FDKFLVLDLEGKV---------EILEFPVVLLDAKTLTVVDRFHRF 85
Query: 181 VRPTCNQLLSDFCKDLTG------IQQIQVDRGVTLSEALLRHDKWLENKGIKN------ 228
VRP C S + G ++++ D + E LL + WLE +++
Sbjct: 86 VRP-CELKGSRLQAYIAGKYGRWKLERLWEDTAIPFQETLLAFEDWLEQHSLRDPESHLL 144
Query: 229 TNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMA 288
N A VT NWD + + +C I P YF WINLK F + +A M
Sbjct: 145 KNSAFVTCGNWDIKTKIPEQCITSGIPLPSYFCEWINLKDIFLNFYNKRARAKSKAPGML 204
Query: 289 GLA------WQGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
+ QG H GLDDA N AR++ + G SIT
Sbjct: 205 SMMRSLDMRVQGSHHLGLDDAHNIARIIQKMESDGAVLSIT 245
>gi|423521215|ref|ZP_17497688.1| hypothetical protein IGC_00598 [Bacillus cereus HuA4-10]
gi|401179586|gb|EJQ86757.1| hypothetical protein IGC_00598 [Bacillus cereus HuA4-10]
Length = 207
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +++RP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHIRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K + +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KRSKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ K P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-KFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|423096447|ref|ZP_17084243.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
gi|397886810|gb|EJL03293.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
Length = 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+E ++WL + V+W ++D + +L+ E + +++
Sbjct: 62 LTHITQASIDSAAPLTEVWPAFERWLAPYHANLEGW--VSWGDYDRKQLLQ-EWQHQQLH 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + R L A+++AGL + G+ H L+DA+NTARLL L++
Sbjct: 119 SVLVQLPHMNLKQRFAKARRLERPTGLNGALQLAGLQFNGQQHRALEDARNTARLLPLVL 178
>gi|302767084|ref|XP_002966962.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
gi|300164953|gb|EFJ31561.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
Length = 315
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 121 MLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTY 180
+L A P QP F F+V+D E EI+EFP V++ + T + F +
Sbjct: 91 VLDAARPLPRQP--FDKFLVLDLEGKV---------EILEFPVVLLDAKTLTVVDRFHRF 139
Query: 181 VRPTCNQLLSDFCKDLTG------IQQIQVDRGVTLSEALLRHDKWLENKGIKN------ 228
VRP C S + G ++++ D + E LL + WLE +++
Sbjct: 140 VRP-CELKGSRLQAYIAGKYGRWKLERLWEDTAIPFQETLLAFEDWLEQHSLRDPESHLL 198
Query: 229 TNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMA 288
N A VT NWD + + +C I P YF WINLK F + +A M
Sbjct: 199 KNSAFVTCGNWDIKTKIPEQCITSGIPLPSYFCEWINLKDIFLNFYNKRARAKSKAPGML 258
Query: 289 GLAW------QGRAHCGLDDAKNTARLLALLMHRGFKFSIT 323
+ QG H GLDDA N AR++ + G SIT
Sbjct: 259 SMMRSLDMRVQGSHHLGLDDAHNIARIVQKMESDGAVLSIT 299
>gi|447917575|ref|YP_007398143.1| hypothetical protein H045_12910 [Pseudomonas poae RE*1-1-14]
gi|445201438|gb|AGE26647.1| hypothetical protein H045_12910 [Pseudomonas poae RE*1-1-14]
Length = 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + EIIE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANIDAAAPITEVWPLFERWLGQHQSRLEGWA--SWGDYD-RAQLELEWQRHGLT 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALANTLHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|398993339|ref|ZP_10696291.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
gi|398135099|gb|EJM24227.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
Length = 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGRELD-HFQRFVRPLRRPLLTLFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L+E ++WL + +A +W ++D + +++ R +
Sbjct: 62 LTRITQGNIDAAQPLTEVWPAFERWLGQHHSRLEGWA--SWGDYDRKQLVQEWERLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AG+ + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LIL 178
>gi|229591814|ref|YP_002873933.1| hypothetical protein PFLU4398 [Pseudomonas fluorescens SBW25]
gi|229363680|emb|CAY51043.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANMDGAAPITEVWPLFERWLGQHHARLEGWA--SWGDYD-RAQLELEWQRHGLA 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALAHTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|410090114|ref|ZP_11286714.1| exonuclease [Pseudomonas viridiflava UASWS0038]
gi|409762575|gb|EKN47588.1| exonuclease [Pseudomonas viridiflava UASWS0038]
Length = 180
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP +L+ FC+D
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVRPVRRPVLTHFCRD 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D T ++WL + + +A +W ++D R LE + R +
Sbjct: 62 LTHISQNNIDGAATFPVVWPLFERWLSHHRARVVGWA--SWGDYD-RKQLEEQWRQHDMT 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
++NLK F + R L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 119 SALSDMPYVNLKQRFAQARQLQRPVGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIL 178
>gi|424067173|ref|ZP_17804630.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408001332|gb|EKG41648.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 181
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +V P LL+ FC++
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELD-HFERFVHPARRPLLTHFCRE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYD-RQQLEEEWRHHHLD 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L DA+NTARLL L++
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|398902099|ref|ZP_10650787.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
gi|398178946|gb|EJM66575.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
Length = 182
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V GQ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-KGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK--- 252
LT I Q +D L++ ++WL +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANIDASQPLTDIWPLFERWLGQHHASLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALSRVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLP 175
Query: 312 LL 313
L+
Sbjct: 176 LV 177
>gi|395651059|ref|ZP_10438909.1| exonuclease family protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 180
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVNREGRELD-HFQRFVRPLRRPLLTPFCRK 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANMDSAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYD-RHQLELEWQRHALA 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ +QG+ H L+DA+NTARLL L++
Sbjct: 119 SALAHTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFQGQQHRALEDARNTARLLPLIL 178
>gi|269126134|ref|YP_003299504.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
gi|268311092|gb|ACY97466.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
Length = 196
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
VID EATC + P Q EIIE +V + A VRP +S FC +LT
Sbjct: 13 VIDVEATCWEGSPPDGQVSEIIEIGLCVVDLAACKRVARHGILVRPE-RSSVSPFCTELT 71
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
G Q +V+RGVTL+EA + LE + + +W ++D R E +C +
Sbjct: 72 GWTQQEVERGVTLAEAC----RILEREHCARSR-PWASWGDYD-RKQFERQCAAGQA-DY 124
Query: 258 PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
P+ R IN K F EV+G R + +A+++AGL +GR H G+DDA N A L+ + R
Sbjct: 125 PFGARHINAKAVFTEVYGLRRRPGMAQALQIAGLPLEGRHHRGVDDAWNIAALVLDIAAR 184
Query: 317 G 317
G
Sbjct: 185 G 185
>gi|357516489|ref|XP_003628533.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
gi|355522555|gb|AET03009.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
Length = 308
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 190
Q +F+V+D E EI+EFP + +S+ T ++E F +VRP+ Q ++
Sbjct: 99 QNHDFFLVLDLEGKV---------EILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRIN 149
Query: 191 DFCKDL---TGIQQIQVDRGVTLSEALLRHDKWLENK----GIKNTNFAVVTWSNWDCRV 243
++ + G+ ++ D + E + + WL + G A VT NWD +
Sbjct: 150 EYIEGKYGKIGVDRVWHDTAIPFKEVIEEFEAWLVQQKLWTGGNLDRAAFVTCGNWDLKT 209
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+ +C +I PPYF WINLK + + + ++ + G H G+DD
Sbjct: 210 KVPQQCEVSRIKVPPYFMEWINLKDIYLNFYNRRATGMVTMMKELQMPLVGSHHLGIDDT 269
Query: 304 KNTARLLALLMHRGFKFSIT 323
KN R+L ++ G IT
Sbjct: 270 KNITRVLQHMLVDGALIQIT 289
>gi|302692530|ref|XP_003035944.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
gi|300109640|gb|EFJ01042.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
Length = 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 105/252 (41%), Gaps = 49/252 (19%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV-------SSVTGQLEAC--FQTYVR 182
Q + F+V+D E TC + YP EIIEFP ++ +LE F ++VR
Sbjct: 113 QNYDAFLVVDVEGTCMQGTTFSYPNEIIEFPVCLMRWRDKADDGTASELEVVDTFHSFVR 172
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEAL-------LRHDKWLENKGIKNTNFAVVT 235
PT +LS FC DLTGI Q QVD ++ L +RH G + + +
Sbjct: 173 PTWRPVLSQFCTDLTGITQSQVDAAPPFADVLRSFYAFMIRHGLIDRRTGKRLVKYCWCS 232
Query: 236 WSNWDCRVMLESECRFKKIWKPPYF-NRWINLKVPFHE---------------------- 272
+D R + +C +I P + ++++VP +
Sbjct: 233 DGPFDLRDFVVKQCFLSRIVFPEWMRGDVLDVRVPVMQWMDEQSSSSDTSSTTSGSPPSS 292
Query: 273 -VFGGVRC-NLKEAVEMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKF------SIT 323
+F R N+ + GL +QGR H G+DD +N R+LA L RG + +IT
Sbjct: 293 PMFPRRRTPNIPAQLRALGLPEFQGRQHSGIDDTRNICRILAELARRGVQLKPNTPINIT 352
Query: 324 NSLMWQTNDGSL 335
W G +
Sbjct: 353 RRWPWMGKKGRV 364
>gi|217075877|gb|ACJ86298.1| unknown [Medicago truncatula]
Length = 252
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 190
Q +F+V+D E EI+EFP + +S+ T ++E F +VRP+ Q ++
Sbjct: 43 QNHDFFLVLDLEGKV---------EILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRIN 93
Query: 191 DFCKDL---TGIQQIQVDRGVTLSEALLRHDKWLENK----GIKNTNFAVVTWSNWDCRV 243
++ + G+ ++ D + E + + WL + G A VT NWD +
Sbjct: 94 EYIEGKYGKIGVDRVWHDTAIPFKEVIEEFEAWLVQQKLWTGGNLDRAAFVTCGNWDLKT 153
Query: 244 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+ +C +I PPYF WINLK + + + ++ + G H G+DD
Sbjct: 154 KVPQQCEVSRIKVPPYFMEWINLKDIYLNFYNRRATGMVTMMKELQMPLVGSHHLGIDDP 213
Query: 304 KNTARLLALLMHRGFKFSIT 323
KN R+L ++ G IT
Sbjct: 214 KNITRVLQHMLVDGALIQIT 233
>gi|330808406|ref|YP_004352868.1| exonuclease [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423696196|ref|ZP_17670686.1| exonuclease family protein [Pseudomonas fluorescens Q8r1-96]
gi|327376514|gb|AEA67864.1| Conserved hypothetical protein; putative exonuclease [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004222|gb|EIK65549.1| exonuclease family protein [Pseudomonas fluorescens Q8r1-96]
Length = 180
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES---ECRFK 252
LT I Q +D L+E ++WL K ++ V+W ++D + +L+ +
Sbjct: 62 LTHITQANIDSAAPLTEVWPAFERWLTPYQSKLESW--VSWGDYDRKQLLQEWQHQQLHS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 VLGQVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFCGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|333900627|ref|YP_004474500.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
gi|333115892|gb|AEF22406.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
Length = 187
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
Y++VID EAT ++ P EIIE + +V + +++ FQ +VRP +L+ FC+
Sbjct: 3 YWLVIDLEATTEEGGWPVEHMEIIEIGASLVDASGHEIDH-FQRFVRPLRRPILTRFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD TL + ++WLE + + +W ++D R LE + +
Sbjct: 62 LTHIAQADVDAAATLPTLWPQFERWLEPHHARLGGW--CSWGDYD-RQQLEQDWHQHGLT 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + R L A+++AG+++ G+ H L+DA+NTARLL L++
Sbjct: 119 SHLQTLPHLNLKQRFAKARQLARPVGLNAALQLAGISFSGQQHRALNDARNTARLLPLVI 178
>gi|388467601|ref|ZP_10141811.1| exonuclease family protein [Pseudomonas synxantha BG33R]
gi|388011181|gb|EIK72368.1| exonuclease family protein [Pseudomonas synxantha BG33R]
Length = 180
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRK 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D RV LE E + +
Sbjct: 62 LTHITQANIDAATPITEVWPLFERWLGQHQARLEGWA--SWGDYD-RVQLELEWQRHGLS 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALGQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
>gi|423692738|ref|ZP_17667258.1| exonuclease family protein [Pseudomonas fluorescens SS101]
gi|387998390|gb|EIK59719.1| exonuclease family protein [Pseudomonas fluorescens SS101]
Length = 180
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRK 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D RV LE E + +
Sbjct: 62 LTHITQANIDMAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYD-RVQLELEWQRHGLA 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALGDTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|399002708|ref|ZP_10705391.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM18]
gi|398124623|gb|EJM14131.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM18]
Length = 182
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGRELDH-FQCFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD LS+ + + WL +A +W ++D + +L+ R +
Sbjct: 62 LTHITQANVDAAQPLSDVWVSFEHWLGQHLSHLEGWA--SWGDYDRKQLLQEWQRLQLDS 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL L+
Sbjct: 120 ALSRVSH-MNLKQRFAKACRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLPLI 177
>gi|440740442|ref|ZP_20919926.1| hypothetical protein A986_19075 [Pseudomonas fluorescens BRIP34879]
gi|440376517|gb|ELQ13184.1| hypothetical protein A986_19075 [Pseudomonas fluorescens BRIP34879]
Length = 180
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANIDAAAPITEVWPLFERWLGQHQSRLEGWA--SWGDYD-RAQLELEWQRHGLT 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALANTLHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|398894018|ref|ZP_10646448.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
gi|398183150|gb|EJM70645.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
Length = 180
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P EIIE + +V +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPIKDMEIIEIGATLVDRKGRELD-HFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF---K 252
LT I Q +D L E ++WL + + V+W ++D + +L+ +
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWLGQHHTRLEGW--VSWGDYDRKQLLQEWQQLGLAS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 ALANVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|256394672|ref|YP_003116236.1| exonuclease RNase T and DNA polymerase III [Catenulispora
acidiphila DSM 44928]
gi|256360898|gb|ACU74395.1| Exonuclease RNase T and DNA polymerase III [Catenulispora
acidiphila DSM 44928]
Length = 188
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ V+D EATC K P Q EIIE IV A Q VRP +S+FC
Sbjct: 6 RFLNVVDVEATCWSGKQPADQVSEIIEIGLTIVDVHKRVRLAKHQIMVRPE-RSTVSEFC 64
Query: 194 KDLTGIQQIQVDRGVTLSEAL--LRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
LTG+ Q QVD GVT +EA LR + +++ +W ++D + L +C
Sbjct: 65 TGLTGLTQAQVDTGVTFAEACDQLRRQHYADSR-------PWASWGDYDRKQFLR-QCDA 116
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+ + N K F + G + + A+E+A L +GR HCG DDA N A L+
Sbjct: 117 TTV-RYPFSSLHTNAKQQFAQANGWTKGVGMHHALEIAQLPLEGRHHCGADDAWNIAALI 175
Query: 311 ALLM 314
LM
Sbjct: 176 LQLM 179
>gi|404400243|ref|ZP_10991827.1| exonuclease [Pseudomonas fuscovaginae UPB0736]
Length = 178
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ +L+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPLAEMEIIEIGATLVNREGRELD-HFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L E ++WL + +A +W ++D R + ++ W
Sbjct: 62 LTHISQANIDTAAPLIEVWGAFERWLGQHQARLEGWA--SWGDYDRR-------QLEQDW 112
Query: 256 KPPYFNRWINLKVP---FHEVFGGVR-----CNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
+ ++ +VP + F R L A+++AGL + G+ H L+DA+NTA
Sbjct: 113 QKLQLTSLLS-QVPHANLKQRFAKARKLQKPLGLNGALQLAGLQFSGQQHRALEDARNTA 171
Query: 308 RLLALLM 314
RLL L++
Sbjct: 172 RLLPLIL 178
>gi|393220516|gb|EJD06002.1| hypothetical protein FOMMEDRAFT_78644 [Fomitiporia mediterranea
MF3/22]
Length = 296
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEAC------ 176
P P+ + Q F F+V+D EATC + + +P EIIE+P V++ E
Sbjct: 40 PESPWPIK-QPFDSFLVLDVEATCQEGTDFNWPNEIIEWPVVLLRWRNKDKEGRAKELYV 98
Query: 177 ---FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGV-------TLSEALLRHDKWLENKGI 226
F+++VRP LS FC LTGI Q QVDR + E L+R++ +
Sbjct: 99 ADEFRSFVRPIWKPQLSAFCTTLTGITQTQVDRAPKFPKVLESFREFLVRNELIDDATEA 158
Query: 227 KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN-------RWINLKVPFHEVFGGVRC 279
K F T +D R + +C KI P + R + + GG
Sbjct: 159 KRERFVWCTDGPFDIRDFVVKQCFISKIQMPTWLKGEVLDVRRVVTHCLNLQANSGGRDA 218
Query: 280 --------NLKEAVEMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
N++E + LA + GR HCG+DD +N AR+L L R + ++
Sbjct: 219 RAPRRRTLNIEEQLRTLNLAEFIGRQHCGIDDTRNIARILTELAKRSIRLEPNTTI 274
>gi|120553343|ref|YP_957694.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120323192|gb|ABM17507.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 201
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 17/186 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQ-------EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+V+D E+TC +D NP + EIIE +++ GQL V+PT LS
Sbjct: 8 LLVVDLESTCWEDLNPEGKRQDVDSMEIIEI-GCALATRDGQLLKSASFLVKPTRFPQLS 66
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
DFC LTGI Q VD T EA+ +KWL G + F +W N+D R E +
Sbjct: 67 DFCTALTGITQSMVDEAPTYPEAIEALNKWL---GELSDEFIWCSWGNYDRR---HVEAQ 120
Query: 251 FKKIWKPPYFNRW--INLKVPFHEVFGGVRCN-LKEAVEMAGLAWQGRAHCGLDDAKNTA 307
++ P +R+ +NLK + G + N L A+ L ++G H G+DDA+N
Sbjct: 121 NQQTGSRPAMSRYPHLNLKRIWRRTTGQKQKNGLANALAFHDLTFEGSHHRGVDDARNIV 180
Query: 308 RLLALL 313
RLL +
Sbjct: 181 RLLPFM 186
>gi|427716974|ref|YP_007064968.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
gi|427349410|gb|AFY32134.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
Length = 183
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 136 QYFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
YF+++D EATC D + + EIIE +V+++ ++++ FQT+++P + L++FC
Sbjct: 3 HYFLIVDLEATCSDDGSIPRHEMEIIEIGAVMLNRENWEIDSEFQTFIKPIRHPKLTNFC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+LT I Q V+ ++A+ +W+ N+ +W N+D + +C+F
Sbjct: 63 TELTTICQHDVENAPEFAKAIKNFQEWM----YSFPNYIFCSWGNYD-KTQFIQDCKFHN 117
Query: 254 IWKPPYFNRWINLKVPFHE-VFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
I P+ + N+K F E + + +A+ + +G H G+DDA+N A +
Sbjct: 118 I-SYPFNSEHRNIKKEFSEYIVTSKSFGMAQALNHLEIELKGTHHRGIDDARNIASIYRY 176
Query: 313 LMHRGF 318
+ + +
Sbjct: 177 MQTKKY 182
>gi|408480703|ref|ZP_11186922.1| hypothetical protein PsR81_09077 [Pseudomonas sp. R81]
Length = 180
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANIDGAAPMTEVWPLFERWLGQHQPRLEGWA--SWGDYD-RKQLELEWQRHGLS 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AGL + G+ H L+DA+NTARLL L++
Sbjct: 119 SALATTPHLNLKQRFAKARRLDKPLGLNGALQLAGLQFHGQQHRALEDARNTARLLPLIL 178
>gi|428184491|gb|EKX53346.1| hypothetical protein GUITHDRAFT_101048 [Guillardia theta CCMP2712]
Length = 638
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 137 YFVVIDFEATCDKDKNPY------------PQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
++ IDFEATCD + P EIIEFP V+V S +G++++ P
Sbjct: 255 HYAFIDFEATCDDRRGEVGEKEAEAMPGFSPSEIIEFPVVLVESASGKVDSA------PE 308
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVM 244
++L++ WL G+ + T +WD R M
Sbjct: 309 FKEVLANMLD-------------------------WLAELGLPEGSVMFATDGDWDLRSM 343
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAK 304
L +C ++ +P RW++++ F E L + G+ + G+AH G+ DA+
Sbjct: 344 LPRQCELAEVPQPVALQRWVDIRRVFSETLKTGNKGLMSMCQALGINFVGQAHSGICDAR 403
Query: 305 NTARLLALLMH 315
N AR+ +LM
Sbjct: 404 NIARVGLVLMQ 414
>gi|387894847|ref|YP_006325144.1| exonuclease family protein [Pseudomonas fluorescens A506]
gi|387159996|gb|AFJ55195.1| exonuclease family protein [Pseudomonas fluorescens A506]
Length = 180
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D P + E+IE + +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVNRQGRELD-HFQRFVRPLRRPLLTPFCRK 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D ++E ++WL + +A +W ++D RV LE E + +
Sbjct: 62 LTHITQANIDMAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYD-RVQLELEWQRHGLS 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SALGDTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
>gi|357410023|ref|YP_004921759.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
flavogriseus ATCC 33331]
gi|320007392|gb|ADW02242.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
flavogriseus ATCC 33331]
Length = 199
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 140 VIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V+D EATC D P P EIIE +V G+ + + VRP +S FC +L
Sbjct: 10 VMDVEATC-WDGQPPPGSVNEIIEIGLTVVDLSAGRRSSRHRVLVRPV-RSAVSGFCTEL 67
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TG+ Q +VDRGVT +EA +E G +A +W ++D R + R +
Sbjct: 68 TGLTQAEVDRGVTFAEAC---RILVEEYGAGERPWA--SWGDYD-RRQFARQSRADGVAY 121
Query: 257 P---PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P P N K F E +G R + +A+ +AGL +GR H G DDA N A L+
Sbjct: 122 PFGFPTERTHTNAKAVFAESYGLRRKPGMDQALRIAGLPLEGRHHRGEDDAWNIAALVLD 181
Query: 313 LMHRG 317
L+ RG
Sbjct: 182 LVGRG 186
>gi|399010408|ref|ZP_10712781.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
gi|398107131|gb|EJL97138.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
Length = 210
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 136 QYFVVIDFEATCDK-----------DKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRP 183
++ +D EATCD+ P EIIE +++ ++ A F VRP
Sbjct: 20 RFVFCVDLEATCDEIMPGIQSSRQLSIQPKDMEIIEIGLIVLDRLSNLSTTAEFSRLVRP 79
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRV 243
T + +L+ FC LTGI+QI V+R +T + +LE I + +W +D
Sbjct: 80 TVHPILTSFCTSLTGIKQIDVERAITFPTVNNELNVFLEPYLIDGAVWC--SWGRYDAD- 136
Query: 244 MLESECRFKKIWKPPYFNRWINLKVP--FHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
L +C ++ +L+V + FG LKEA + G+AW G H D
Sbjct: 137 QLRQDC--TRLEVTSLLTELEHLEVDEFYSRAFGISAPCLKEATKSMGIAWHGAYHRAPD 194
Query: 302 DAKNTARLLALLMHR 316
DA+N ARLLA L+ R
Sbjct: 195 DARNLARLLAKLLDR 209
>gi|296137636|ref|YP_003644877.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
gi|295797758|gb|ADG32547.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
Length = 179
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 137 YFVVIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+VID EATCD D + P EIIE +V ++V G + FQ VRP L+ FC
Sbjct: 4 VVLVIDLEATCD-DADGLPASDMEIIEIGAVW-ATVEGSVLDTFQALVRPVVRPQLTPFC 61
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+ LT IQQ VD R + + + +W +D + L +C
Sbjct: 62 RQLTNIQQADVDGAELFPAVAARLASFAQRHQAPGATWG--SWGQFDAK-QLARDCERHG 118
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P +NLK F + + A++M GL G H GLDDA+N A+LL
Sbjct: 119 IESPLAAFEHVNLKRRFAKGRKIKEVGMARALQMVGLPLDGSHHRGLDDARNIAKLL 175
>gi|378949672|ref|YP_005207160.1| exonuclease [Pseudomonas fluorescens F113]
gi|359759686|gb|AEV61765.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas fluorescens F113]
Length = 180
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ FQ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES---ECRFK 252
LT I Q +D L+E ++WL K ++ V+W ++D + +L+ +
Sbjct: 62 LTHITQANIDGAAPLTEVWPAFERWLVPYQSKLESW--VSWGDYDRKQLLQEWQHQQLHS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL + G+ H L+DA+NTARLL
Sbjct: 120 VLGQVPH----MNLKQRFAKARRLERPLGLNGALQLAGLQFCGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L++
Sbjct: 176 LVL 178
>gi|390456686|ref|ZP_10242214.1| exonuclease domain-containing protein 1 [Paenibacillus peoriae KCTC
3763]
Length = 177
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+++ D EATC ++ EIIE +V V++ ++ + FQ +++P N LSDFCK LT
Sbjct: 3 YIIFDLEATCWENDRTRQNEIIEIGAVKVNA-NLEIISEFQAFIKPKLNPQLSDFCKSLT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q ++D + + +W I + + +W +D + L+ +C KI +
Sbjct: 62 SISQQEIDMATYFPLVIYKFQEW-----IGKEPYYLCSWGFYD-KSQLKKDCELHKI-RT 114
Query: 258 PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ I++K ++ G R ++ A++M L +G H G+DDAKN +++
Sbjct: 115 EWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISKIFV 169
>gi|423485063|ref|ZP_17461752.1| hypothetical protein IEQ_04840 [Bacillus cereus BAG6X1-2]
gi|401136463|gb|EJQ44053.1| hypothetical protein IEQ_04840 [Bacillus cereus BAG6X1-2]
Length = 207
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E ++++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYESHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|326204418|ref|ZP_08194276.1| Exonuclease RNase T and DNA polymerase III [Clostridium
papyrosolvens DSM 2782]
gi|325985450|gb|EGD46288.1| Exonuclease RNase T and DNA polymerase III [Clostridium
papyrosolvens DSM 2782]
Length = 187
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 25/192 (13%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQ--LEAC-FQTYVRPTCNQLLS 190
+ +D EATC +K+K P+ EIIE +V VTGQ +E F +RP +LS
Sbjct: 2 LIFVDLEATCWDKNEKNKRPHA-EIIEIGAV----VTGQDLIEISKFSVVIRPEIEPVLS 56
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCRVMLESEC 249
D+CK+LTG+ Q V+ G+ + A+ +W L+ + ++NT + TW ++D ++ S
Sbjct: 57 DYCKELTGLSQTDVENGMEFNRAISHLYQWILKYENMENT--VLYTWGDYDIFLLKRSLR 114
Query: 250 RFKKIWKPPYF------NRWINLKVPFHEV--FGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
R K +K F INL+ F + CNL +A+++ G + G+ H +D
Sbjct: 115 RHK--YKNKDFLSIIHKGGLINLQEQFMKFTKLPSSSCNLVKALQIIGENYHGKMHRSVD 172
Query: 302 DAKNTARLLALL 313
DA+N +L L
Sbjct: 173 DAENMIKLYRYL 184
>gi|229062584|ref|ZP_04199894.1| Sporulation inhibitor KapD [Bacillus cereus AH603]
gi|228716687|gb|EEL68383.1| Sporulation inhibitor KapD [Bacillus cereus AH603]
Length = 207
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + ++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+GV+ E + + ++ K K T +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGVSFHELVEKLAEY--EKRCKPT---IVTWGNMDMKV-LKQNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|163942626|ref|YP_001647510.1| sporulation inhibitor KapD [Bacillus weihenstephanensis KBAB4]
gi|229014099|ref|ZP_04171221.1| Sporulation inhibitor KapD [Bacillus mycoides DSM 2048]
gi|229135740|ref|ZP_04264512.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST196]
gi|423490070|ref|ZP_17466752.1| hypothetical protein IEU_04693 [Bacillus cereus BtB2-4]
gi|423495794|ref|ZP_17472438.1| hypothetical protein IEW_04692 [Bacillus cereus CER057]
gi|423497412|ref|ZP_17474029.1| hypothetical protein IEY_00639 [Bacillus cereus CER074]
gi|423519592|ref|ZP_17496073.1| hypothetical protein IG7_04662 [Bacillus cereus HuA2-4]
gi|423597802|ref|ZP_17573802.1| hypothetical protein III_00604 [Bacillus cereus VD078]
gi|423660249|ref|ZP_17635418.1| hypothetical protein IKM_00646 [Bacillus cereus VDM022]
gi|423670473|ref|ZP_17645502.1| hypothetical protein IKO_04170 [Bacillus cereus VDM034]
gi|423673320|ref|ZP_17648259.1| hypothetical protein IKS_00863 [Bacillus cereus VDM062]
gi|163864823|gb|ABY45882.1| Exonuclease RNase T and DNA polymerase III [Bacillus
weihenstephanensis KBAB4]
gi|228647706|gb|EEL03769.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST196]
gi|228747207|gb|EEL97088.1| Sporulation inhibitor KapD [Bacillus mycoides DSM 2048]
gi|401149630|gb|EJQ57097.1| hypothetical protein IEW_04692 [Bacillus cereus CER057]
gi|401157733|gb|EJQ65129.1| hypothetical protein IG7_04662 [Bacillus cereus HuA2-4]
gi|401163132|gb|EJQ70485.1| hypothetical protein IEY_00639 [Bacillus cereus CER074]
gi|401239334|gb|EJR45766.1| hypothetical protein III_00604 [Bacillus cereus VD078]
gi|401296159|gb|EJS01779.1| hypothetical protein IKO_04170 [Bacillus cereus VDM034]
gi|401303910|gb|EJS09471.1| hypothetical protein IKM_00646 [Bacillus cereus VDM022]
gi|401310948|gb|EJS16257.1| hypothetical protein IKS_00863 [Bacillus cereus VDM062]
gi|402429749|gb|EJV61831.1| hypothetical protein IEU_04693 [Bacillus cereus BtB2-4]
Length = 207
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +++RP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHIRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K+ +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KSGKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|398928566|ref|ZP_10663545.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398168164|gb|EJM56186.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 205
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 136 QYFVVIDFEATCDK---DKNPYP-------QEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
+Y +D EATCD+ ++P P E IE V++ + ++ FQ +VRP
Sbjct: 21 RYLYCVDLEATCDEVDESESPRPLAVVPTQMETIEIGLVVIDLESLEIVDEFQRFVRPQI 80
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVML 245
N L+DFC LT IQQ VD T E L N A +W ++D R L
Sbjct: 81 NPTLTDFCIKLTSIQQPDVDGAQTYQEV----GDELRTFAASYPNAAWASWGDYDAR-QL 135
Query: 246 ESECRFKK----IWKPPYFN--RWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCG 299
E F + P+FN +W ++ +LK+ VE GL WQG H G
Sbjct: 136 ERGAGFAACPSLLEGLPHFNARKW------HAGLYDNRPKSLKQTVESLGLVWQGTYHRG 189
Query: 300 LDDAKNTARLLALLM 314
+DDA+N A ++ ++
Sbjct: 190 IDDARNVASIVKEIL 204
>gi|423451797|ref|ZP_17428650.1| hypothetical protein IEE_00541 [Bacillus cereus BAG5X1-1]
gi|423471094|ref|ZP_17447838.1| hypothetical protein IEM_02400 [Bacillus cereus BAG6O-2]
gi|423557522|ref|ZP_17533825.1| hypothetical protein II3_02727 [Bacillus cereus MC67]
gi|401144001|gb|EJQ51534.1| hypothetical protein IEE_00541 [Bacillus cereus BAG5X1-1]
gi|401192928|gb|EJQ99936.1| hypothetical protein II3_02727 [Bacillus cereus MC67]
gi|402432574|gb|EJV64630.1| hypothetical protein IEM_02400 [Bacillus cereus BAG6O-2]
Length = 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +++RP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHIRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + + ++ K K T +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELVEKLAEY--EKSCKPT---IVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|388545903|ref|ZP_10149182.1| exonuclease [Pseudomonas sp. M47T1]
gi|388276020|gb|EIK95603.1| exonuclease [Pseudomonas sp. M47T1]
Length = 206
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 135 FQYFVVIDFEATCDKDKNP-----------YPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
++Y + +D EATCD+D P E IE ++ + ++ FQ++VRP
Sbjct: 20 YRYLLCVDLEATCDEDAKPGEPPCQLIVQREDMETIEIGLAVIDLSSLKVVDQFQSFVRP 79
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRV 243
T + +L+DFC+ LT I+Q VD D +L + N +W ++D +
Sbjct: 80 TLHPVLTDFCRALTTIKQSDVDAAPDYVWVAQMLDAFL----VDYPNSMWCSWGDYDFKQ 135
Query: 244 MLESECRFKKIWKPPYFN--RWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLD 301
+ + R P + R NLK +V+ L+ AVEM G+ W+G H G+D
Sbjct: 136 LQQDASRLNC---RPMLDGMRHTNLKKWHWKVYDCRALGLQPAVEMLGMEWEGTYHRGID 192
Query: 302 DAKNTARL 309
DA+N A +
Sbjct: 193 DARNVASV 200
>gi|229169634|ref|ZP_04297336.1| Sporulation inhibitor KapD [Bacillus cereus AH621]
gi|423368914|ref|ZP_17346345.1| hypothetical protein IC3_04014 [Bacillus cereus VD142]
gi|423595881|ref|ZP_17571911.1| hypothetical protein IIG_04748 [Bacillus cereus VD048]
gi|228613830|gb|EEK70953.1| Sporulation inhibitor KapD [Bacillus cereus AH621]
gi|401079028|gb|EJP87332.1| hypothetical protein IC3_04014 [Bacillus cereus VD142]
gi|401221775|gb|EJR28389.1| hypothetical protein IIG_04748 [Bacillus cereus VD048]
Length = 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +++RP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHIRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + + ++ K K T +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELVEKLAEY--EKSCKPT---IVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|51260906|gb|AAH79640.1| Eri3 protein [Mus musculus]
Length = 135
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLESECRFKK 253
LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML +C +
Sbjct: 1 LTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLG 60
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDAKNTARL 309
+ YF +WINLK + G C K ++M GL+ Q GR H G+DD KN A +
Sbjct: 61 LPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANI 117
Query: 310 LALLMHRGFKFSITN 324
+ L +RGF F T+
Sbjct: 118 MKTLAYRGFIFKQTS 132
>gi|407646661|ref|YP_006810420.1| hypothetical protein O3I_027485 [Nocardia brasiliensis ATCC 700358]
gi|407309545|gb|AFU03446.1| hypothetical protein O3I_027485 [Nocardia brasiliensis ATCC 700358]
Length = 190
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 16/191 (8%)
Query: 140 VIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC P EIIE +V +G A + VRP +S+FC +LT
Sbjct: 10 VVDVEATCWAGTPPPGAVSEIIEIGLTVVDLGSGARTAKHRILVRP-ARSTVSEFCTELT 68
Query: 198 GIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
G+ Q +VD GV +EA LL D + +W ++D R ++C
Sbjct: 69 GLTQDEVDTGVEFAEACRLLAADHAAGTR-------PWASWGDYD-RKQFRNQCAATGT- 119
Query: 256 KPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P+ +R N K+ F E +G R + A+++AGL +GR H G DDA N A L+ +
Sbjct: 120 AYPFGSRHTNAKLVFSEAYGLPKRQGMAGALQIAGLPLEGRHHSGADDAWNIAALVLDIT 179
Query: 315 HRGFKFSITNS 325
RG + +TN+
Sbjct: 180 GRG-AWRVTNT 189
>gi|423613070|ref|ZP_17588930.1| hypothetical protein IIM_03784 [Bacillus cereus VD107]
gi|401242632|gb|EJR49005.1| hypothetical protein IIM_03784 [Bacillus cereus VD107]
Length = 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + ++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEIG--LVSVVGCKVENTYSSHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+F ++ +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGV-AFPFFGQFRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|226945053|ref|YP_002800126.1| Exonuclease [Azotobacter vinelandii DJ]
gi|226719980|gb|ACO79151.1| Exonuclease [Azotobacter vinelandii DJ]
Length = 185
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 138 FVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
++VID EAT D+ P EIIE + +V+ +L+ F+ +VRP LL+ FC++L
Sbjct: 4 WLVIDLEATTDEGGWPVADMEIIEIGASLVNRNGHELD-HFKRFVRPLRRPLLTLFCQEL 62
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
T I Q +D L + + WL + + +W ++D R LE E R +
Sbjct: 63 THIAQSDIDSATPLPMVWEQFEHWLAPYRPRLAGW--TSWGDYDRR-QLEQEWRRHGLAS 119
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+NLK F + R L+ A+++AG+++QG+ H L+DA+NTARLL L
Sbjct: 120 SLIPLSHVNLKQRFADTRQLKRPVGLRTALQLAGMSFQGQQHRALEDARNTARLLPL 176
>gi|409082606|gb|EKM82964.1| hypothetical protein AGABI1DRAFT_82658 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 416
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVS----SVTGQLEAC--FQTYVRPT 184
Q + F+V+D EATC D N YP EIIEFP ++ T L+ F++ VRP+
Sbjct: 25 QPYDAFLVLDVEATCLQGTDFN-YPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPS 83
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-------KNTNFAVVTWS 237
LS FC +LTGI Q QVD + L +L G+ + F +
Sbjct: 84 WRPTLSAFCTELTGITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCWCSDG 143
Query: 238 NWDCRVMLESECRFKKIWKPPYFN-----------RWINLKVPFHEV--------FGGVR 278
+D R + +C +I P + +W++ + + F VR
Sbjct: 144 PFDIRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQARFPPVR 203
Query: 279 CNLKEAVEMAGL---AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+L + ++ L ++QGR H G+DDA+N AR++ L RG
Sbjct: 204 RSLNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVAL 248
>gi|229076290|ref|ZP_04209255.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-18]
gi|229099371|ref|ZP_04230301.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-29]
gi|229105531|ref|ZP_04236165.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-28]
gi|229118383|ref|ZP_04247737.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-3]
gi|423377256|ref|ZP_17354540.1| hypothetical protein IC9_00609 [Bacillus cereus BAG1O-2]
gi|423440367|ref|ZP_17417273.1| hypothetical protein IEA_00697 [Bacillus cereus BAG4X2-1]
gi|423449484|ref|ZP_17426363.1| hypothetical protein IEC_04092 [Bacillus cereus BAG5O-1]
gi|423463430|ref|ZP_17440198.1| hypothetical protein IEK_00617 [Bacillus cereus BAG6O-1]
gi|423532783|ref|ZP_17509201.1| hypothetical protein IGI_00615 [Bacillus cereus HuB2-9]
gi|423541954|ref|ZP_17518344.1| hypothetical protein IGK_04045 [Bacillus cereus HuB4-10]
gi|423548186|ref|ZP_17524544.1| hypothetical protein IGO_04621 [Bacillus cereus HuB5-5]
gi|423619366|ref|ZP_17595199.1| hypothetical protein IIO_04691 [Bacillus cereus VD115]
gi|423622020|ref|ZP_17597798.1| hypothetical protein IK3_00618 [Bacillus cereus VD148]
gi|228664953|gb|EEL20441.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-3]
gi|228677801|gb|EEL32044.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-28]
gi|228683995|gb|EEL37943.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-29]
gi|228706725|gb|EEL58933.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-18]
gi|401127765|gb|EJQ35472.1| hypothetical protein IEC_04092 [Bacillus cereus BAG5O-1]
gi|401169291|gb|EJQ76537.1| hypothetical protein IGK_04045 [Bacillus cereus HuB4-10]
gi|401176215|gb|EJQ83411.1| hypothetical protein IGO_04621 [Bacillus cereus HuB5-5]
gi|401251403|gb|EJR57681.1| hypothetical protein IIO_04691 [Bacillus cereus VD115]
gi|401262688|gb|EJR68829.1| hypothetical protein IK3_00618 [Bacillus cereus VD148]
gi|401639858|gb|EJS57595.1| hypothetical protein IC9_00609 [Bacillus cereus BAG1O-2]
gi|402420138|gb|EJV52410.1| hypothetical protein IEA_00697 [Bacillus cereus BAG4X2-1]
gi|402422301|gb|EJV54543.1| hypothetical protein IEK_00617 [Bacillus cereus BAG6O-1]
gi|402464760|gb|EJV96449.1| hypothetical protein IGI_00615 [Bacillus cereus HuB2-9]
Length = 207
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + ++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + DK E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEIVDKGISFPELI---DKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 SGVAF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|398845736|ref|ZP_10602756.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
gi|398253249|gb|EJN38386.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
Length = 181
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 18/184 (9%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +VRP L+ FC+
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVML------ESEC 249
LT I Q VD E R ++WL + + A V+W ++D + +L E +
Sbjct: 62 LTKISQANVDSAAAFPEVWARFERWLGHH--RGQLQAWVSWGDYDRQQLLQEWQQHELDS 119
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ + P+ INLK F + R L A+ +AG+ + G+ H L+DA+NTAR
Sbjct: 120 LLRNL---PH----INLKQRFAKARHLQRPTGLNGALHLAGMHFSGQQHRALEDARNTAR 172
Query: 309 LLAL 312
LL L
Sbjct: 173 LLPL 176
>gi|389749260|gb|EIM90437.1| hypothetical protein STEHIDRAFT_93411 [Stereum hirsutum FP-91666
SS1]
Length = 510
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV------SSVTGQLEAC--FQTYVRP 183
Q + F+V+D EATC + + +P EIIE+P ++ + + +L+ F+++V+P
Sbjct: 87 QTYDAFLVLDVEATCMQGTDFHWPNEIIEWPVCLLMWKDKQNGMASRLDVVDEFRSFVKP 146
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-------KNTNFAVVTW 236
T LLS FC LTGI Q QVD + + + + +L G+ + F +
Sbjct: 147 TWRPLLSAFCTQLTGITQAQVDSAPHFPQVVNQFNAFLIKNGLIHPVTGERLVRFCWCSD 206
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWI--------NLKVPFHEVFGG-----------V 277
+D R + +C KI P RW+ L +H G +
Sbjct: 207 GPFDVRDFVVKQCFISKIAMP----RWLAGDIMDVRKLVGEWHAQSAGSSSRKSLFPRRI 262
Query: 278 RCNLKEAVEMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKF 320
N++ + GL +QGR H G+DD +N AR++ L RG
Sbjct: 263 SMNIESQLRALGLGNFQGRQHSGIDDTRNIARIVTELARRGITL 306
>gi|119486052|ref|ZP_01620114.1| Exonuclease [Lyngbya sp. PCC 8106]
gi|119456827|gb|EAW37955.1| Exonuclease [Lyngbya sp. PCC 8106]
Length = 191
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 133 QEFQYFVVIDFEATCDKDKNPY--PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
Q + Y ++ID EATC EIIE +V+V + FQT+++P + +L+
Sbjct: 4 QHYNYCLIIDLEATCCDQHTILRSEMEIIEIGAVMVETKKLTSVNEFQTFIKPIRHPILT 63
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
FC+ LT I Q QV++ EA+ WL +++ +W ++D R + + +
Sbjct: 64 KFCQQLTSITQAQVEQAPHYPEAIKNLKNWLSQYS--DSHLIWGSWGDYD-RRQFDQDSQ 120
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
F + P + INLK F G R + +A+++A + +G H G+DD +N A+L
Sbjct: 121 FHHVSFPIGYPH-INLKKMFSTSQGLKGRYGMADALKLANIPLEGTHHRGIDDTRNIAKL 179
Query: 310 LALLM 314
+ ++
Sbjct: 180 MPYIL 184
>gi|54301691|ref|YP_131684.1| hypothetical protein PBPRB0011 [Photobacterium profundum SS9]
gi|46915111|emb|CAG21884.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 191
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + ++P EIIE + TG++ Q YV+P +++ S+FC
Sbjct: 8 FNRIVCFDLEMCCWNDGRDPKTGEIIEIGLAELDLDTGEIVRRTQHYVKPEHDEI-SEFC 66
Query: 194 KDLTGIQ-QIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ Q+ G L+E L + +E+K G K+ +A W + D +L +EC
Sbjct: 67 TELTGIKPQVIHKNGKPLAEIL----RSMESKFGGKHKIYA--AWGHDD--RILHAECAA 118
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K + P F +INL + F RC + A+E+AGL W+GR H G DA N ARL
Sbjct: 119 KGLKVP--FTEYINLAMIFRLQRHVKKKRCGQRAAMEIAGLEWEGRQHSGYVDAYNLARL 176
Query: 310 LALL 313
L
Sbjct: 177 TRTL 180
>gi|90409780|ref|ZP_01217797.1| hypothetical protein P3TCK_03416 [Photobacterium profundum 3TCK]
gi|90329133|gb|EAS45390.1| hypothetical protein P3TCK_03416 [Photobacterium profundum 3TCK]
Length = 186
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + ++P EIIE + TG++ Q YV+P +++ S+FC
Sbjct: 3 FNRIVCFDLEMCCWNDGRDPKTGEIIEIGLAELDLDTGEIVRRTQHYVKPEHDEI-SEFC 61
Query: 194 KDLTGIQ-QIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ Q+ G L+E L + +E+K G K+ +A W + D +L +EC
Sbjct: 62 TELTGIKPQVIHKNGKPLAEIL----RSMESKFGGKHKIYAA--WGHDD--RILHAECAA 113
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K + P F +INL + F RC + A+E+AGL W+GR H G DA N ARL
Sbjct: 114 KGLKVP--FTEYINLAMIFRLQRHVKKKRCGQRAAMEIAGLEWEGRQHSGYVDAYNLARL 171
Query: 310 LALL 313
L
Sbjct: 172 TRTL 175
>gi|426200471|gb|EKV50395.1| hypothetical protein AGABI2DRAFT_190719 [Agaricus bisporus var.
bisporus H97]
Length = 416
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIVS----SVTGQLEAC--FQTYVRPT 184
Q + F+V+D EATC D N YP EIIEFP ++ T L+ F++ VRP+
Sbjct: 25 QPYDAFLVLDVEATCLQGTDFN-YPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPS 83
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-------KNTNFAVVTWS 237
LS FC +LTGI Q QVD + L +L G+ + F +
Sbjct: 84 WRPTLSAFCTELTGITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCWCSDG 143
Query: 238 NWDCRVMLESECRFKKIWKPPYFN-----------RWINLKVPFHEV--------FGGVR 278
+D R + +C +I P + +W++ + + F +R
Sbjct: 144 PFDIRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQARFPPIR 203
Query: 279 CNLKEAVEMAGL---AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+L + ++ L ++QGR H G+DDA+N AR++ L RG
Sbjct: 204 RSLNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVAL 248
>gi|428207633|ref|YP_007091986.1| Exonuclease RNase T and DNA polymerase III [Chroococcidiopsis
thermalis PCC 7203]
gi|428009554|gb|AFY88117.1| Exonuclease RNase T and DNA polymerase III [Chroococcidiopsis
thermalis PCC 7203]
Length = 192
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
Query: 132 PQEFQYFVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
P++ +VID E+TC +DK P QE IIE V +G+ V+P +Q+
Sbjct: 2 PKKTDRIIVIDIESTCWQDKPPIGQESEIIEIGICTVDVASGKRLEKESILVKPEKSQV- 60
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEA-LLRHDKWLENKGIKNTNFAVVTWSNW--DCRVMLE 246
S+FC LT + Q QV+RG++L EA + +K+ + I W+++ D R E
Sbjct: 61 SEFCTQLTTLTQAQVERGISLKEACTILKNKYQSQQRI---------WASFGDDDRRQFE 111
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+C+ KKI P+ +R IN+K F + + EA+E +G H G DDA N
Sbjct: 112 KQCQSKKI-NYPFGSRHINVKTLFAVIHALPNEIGMAEALEKLNFPLEGTHHRGGDDAWN 170
Query: 306 TARLLA--LLMHRG 317
A +L+ LL RG
Sbjct: 171 IALILSELLLKSRG 184
>gi|392404561|ref|YP_006441173.1| Exonuclease RNase T and DNA polymerase III [Turneriella parva DSM
21527]
gi|390612515|gb|AFM13667.1| Exonuclease RNase T and DNA polymerase III [Turneriella parva DSM
21527]
Length = 198
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 136 QYFVVIDFEATCDKDKN--PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++++ +D EATC +D +E IE +V + + + A FQ Y+RP + L+ FC
Sbjct: 9 RHYIFLDLEATCARDSGIARAERETIEIGAVAIDAASNMTVATFQEYIRPVHHPSLTAFC 68
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+LTGI Q VD R W+ I++ + +W ++D + L +CR +
Sbjct: 69 TELTGITQATVDAAAFFPHVFARFSAWV--AAIEDCF--LFSWGHFD-KKQLVLDCRRHQ 123
Query: 254 I--WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P F+ + L ++ R L+ + GL ++GR H L DA+NTARL
Sbjct: 124 IEYTLPAGFHDFKGLFFKKQKLLQ--RAGLEATLVQLGLRFEGRPHGALADARNTARL 179
>gi|182438132|ref|YP_001825851.1| hypothetical protein SGR_4339 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466648|dbj|BAG21168.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 190
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
D Q+ V+D EATC + P Q EIIE +V G+ A + VRP +
Sbjct: 2 DRGAQDGWLLNVVDVEATCWDGQPPPGQVNEIIEIGLTVVDLRAGRRLAKHRLLVRPARS 61
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEA----LLRHDKWLENKGIKNTNFAVVTWSNWDCR 242
++ S FC +LTG+ Q +VD G+ +EA + H + +W ++D R
Sbjct: 62 KV-SPFCTELTGLTQAEVDGGLPFAEACRVLAVEH---------RTGQLPWASWGDYD-R 110
Query: 243 VMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLD 301
+CR + P+ R N KV F +G R + +A+E+AGL +GR H G D
Sbjct: 111 NQFTRQCRATDA-EYPFGQRHTNAKVAFTASYGLRRRPGMAQALEVAGLPLEGRHHRGDD 169
Query: 302 DAKNTARLLALLMHRG 317
DA N A L+ L RG
Sbjct: 170 DAWNIAALVLDLAGRG 185
>gi|326778782|ref|ZP_08238047.1| Exonuclease RNase T and DNA polymerase III [Streptomyces griseus
XylebKG-1]
gi|326659115|gb|EGE43961.1| Exonuclease RNase T and DNA polymerase III [Streptomyces griseus
XylebKG-1]
Length = 190
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
D Q+ V+D EATC + P Q EIIE +V G+ A + VRP +
Sbjct: 2 DRGAQDGWLLNVVDVEATCWDGQPPPGQVNEIIEIGLTVVDLRAGRRLAKHRLLVRPARS 61
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEA----LLRHDKWLENKGIKNTNFAVVTWSNWDCR 242
++ S FC +LTG+ Q +VD G+ +EA + H + +W ++D R
Sbjct: 62 KV-SPFCTELTGLTQAEVDGGLPFAEACRVLAVEH---------RTGRLPWASWGDYD-R 110
Query: 243 VMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLD 301
+CR + P+ R N KV F +G R + +A+E+AGL +GR H G D
Sbjct: 111 NQFTRQCRATDA-EYPFGQRHTNAKVAFTASYGLRRRPGMAQALEVAGLPLEGRHHRGDD 169
Query: 302 DAKNTARLLALLMHRG 317
DA N A L+ L RG
Sbjct: 170 DAWNIAALVLDLAGRG 185
>gi|395494831|ref|ZP_10426410.1| hypothetical protein PPAM2_02110 [Pseudomonas sp. PAMC 25886]
Length = 180
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + EIIE +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEIGVSLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L++ ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANIDAAAPLNDVWPLFERWLGQHQARLEGWA--SWGDYD-RQQLELEWQRHGLS 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SVLSQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|124007771|ref|ZP_01692473.1| 3'-5' exonuclease eri-1 [Microscilla marina ATCC 23134]
gi|123986717|gb|EAY26498.1| 3'-5' exonuclease eri-1 [Microscilla marina ATCC 23134]
Length = 185
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+V++D EATC + + E IE +V + + G+ F T+V+P + +LS+FC LT
Sbjct: 3 YVIVDLEATCWETRENRANETIEIGAVCIGN-EGKWVDEFDTFVKPVTHPVLSEFCTQLT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q VD EAL +W+ N + + +W +D RV +++C +
Sbjct: 62 SITQEMVDDAPLFPEALDDFQQWINNCA-NGDQYVLCSWGYYD-RVQFKNDCLLHNL-PT 118
Query: 258 PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ I+LK + ++ R +K+A++ GL G H G+DDAKN A + +
Sbjct: 119 QWLASHISLKHQYADIKNMRRPIGMKKALQKEGLFLSGTHHRGIDDAKNIADIFLI 174
>gi|423513620|ref|ZP_17490150.1| hypothetical protein IG3_05116 [Bacillus cereus HuA2-1]
gi|402445285|gb|EJV77158.1| hypothetical protein IG3_05116 [Bacillus cereus HuA2-1]
Length = 207
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLLS 190
Q F+ +DFE T K K +P EIIE V + SV G ++E + +++RP L+
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIE---VGLVSVAGCKVEDTYSSHIRPKTFPSLT 59
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
D CK GI+Q VD+G++ E + +K E + K+ +VTW N D +V L+ C
Sbjct: 60 DRCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KSGKPTIVTWGNMDMKV-LKHNCE 113
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 114 MAGV-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|395793817|ref|ZP_10473164.1| hypothetical protein A462_01328 [Pseudomonas sp. Ag1]
gi|421144025|ref|ZP_15603949.1| exonuclease [Pseudomonas fluorescens BBc6R8]
gi|395342017|gb|EJF73811.1| hypothetical protein A462_01328 [Pseudomonas sp. Ag1]
gi|404504811|gb|EKA18857.1| exonuclease [Pseudomonas fluorescens BBc6R8]
Length = 180
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++++ID EAT D+ P + EIIE +V+ +L+ FQ +VRP LL+ FC+
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEIGVSLVNRQGRELD-HFQRFVRPLRRPLLTPFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q +D L E ++WL + +A +W ++D R LE E + +
Sbjct: 62 LTHITQANIDAAAPLIEVWPLFERWLGQHQARLEGWA--SWGDYD-RQQLELEWQRHGLS 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A+++AG+ + G+ H L+DA+NTARLL L++
Sbjct: 119 SVLGQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|291442316|ref|ZP_06581706.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
gi|291345211|gb|EFE72167.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
Length = 187
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC + + P Q EIIE +V G+ A + VRP +++ S FC +LT
Sbjct: 10 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPARSEV-SPFCTELT 68
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC--RVMLESECRFKKIW 255
G+ Q VD+G+ +EA + L K + ++ W++W R +CR
Sbjct: 69 GLTQADVDQGLPFTEAC----RALAAK----HHTGLIPWASWGDYDRNQFTRQCRHTGT- 119
Query: 256 KPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+ P+ +R N+K F +G R + +A+ +AGL +GR H G DDA N A L+ L+
Sbjct: 120 QYPFNHRHTNVKAAFTTSYGLRRRPGMAQALTVAGLPLEGRHHRGDDDAWNIAALVLDLV 179
Query: 315 HRG 317
RG
Sbjct: 180 GRG 182
>gi|170722729|ref|YP_001750417.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
gi|169760732|gb|ACA74048.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
Length = 181
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 18/184 (9%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVML------ESEC 249
LT I Q VD E R ++WL + + A V+W ++D + +L E +
Sbjct: 62 LTHISQANVDSAAPFPEVWARFERWLGHH--RGQLQAWVSWGDYDRQQLLQEWQQHELDS 119
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ + P+ INLK F + R L A+++AG+ + G+ H L+DA+NTAR
Sbjct: 120 LLRNL---PH----INLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTAR 172
Query: 309 LLAL 312
LL L
Sbjct: 173 LLPL 176
>gi|2257567|dbj|BAA21459.1| pi077 [Schizosaccharomyces pombe]
Length = 231
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 154 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA 213
+ EIIE P ++ + + F +YVRP+ N LSD+CK LTGIQQ VD+ S+
Sbjct: 17 FENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYCKSLTGIQQCTVDKAPIFSDV 76
Query: 214 -------LLRHDKWLEN-----------KGIKNT---NFAVVTWSNWDCRVMLESECRFK 252
L +H L K + T N+A WD L + ++
Sbjct: 77 LEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFKYD 136
Query: 253 KIWKPPYF-NRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
K+ P + +++++ + +V+ R N+ +E GL ++G H G+DDA+N +R++
Sbjct: 137 KMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQFEGSEHRGIDDARNLSRIVK 196
Query: 312 LLMHRGFKFSITNSLMWQTNDGSLTWNQFP 341
+ +F M +G + +P
Sbjct: 197 KMCSENVEFECNRWWMEYEKNGWIPNRSYP 226
>gi|395333281|gb|EJF65658.1| hypothetical protein DICSQDRAFT_49122 [Dichomitus squalens LYAD-421
SS1]
Length = 258
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 43/234 (18%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVI-------VSSVTGQLE--ACFQTYVR 182
Q + F+V+D EATC + + YP EIIE+P + V T +LE A F+++VR
Sbjct: 7 QVYDAFLVLDVEATCVEGSDFAYPNEIIEWPVCLLRWKDANVKGKTRELEIVAEFRSFVR 66
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------NKGIKNTNFAVVTW 236
PT LS+FC+ LTGI Q QVD T E L K+LE G + F +
Sbjct: 67 PTWRPQLSEFCQALTGITQEQVDSASTFPEVLQDFRKFLEEHELLDEAGHRLARFCFCSD 126
Query: 237 SNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLA---- 291
+D R + +C KI P + + + + V G N AVE +
Sbjct: 127 GPYDIRDFVVKQCFISKIPVPAWLSGDV---MDVRRVVGEWHDANTAAAVERRQVGAFPL 183
Query: 292 -------------------WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ GR H G+DD +N RL+ L RG++ ++
Sbjct: 184 PRRMTFPIPRQLHALGLEPFVGRQHSGIDDTRNICRLVIELARRGWRLEPNTAI 237
>gi|302525599|ref|ZP_07277941.1| exonuclease superfamily protein [Streptomyces sp. AA4]
gi|302434494|gb|EFL06310.1| exonuclease superfamily protein [Streptomyces sp. AA4]
Length = 193
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC +++ P Q EIIE +V G+ A + VRP +++ S FC +LT
Sbjct: 16 VVDVEATCWENQPPPGQVSEIIEIGLTVVDLRAGERVAKHRILVRPARSEV-SPFCTELT 74
Query: 198 GIQQIQVDRGVTLSEA----LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
G+ Q +VD G++ EA +RH + T +W ++D R +CR
Sbjct: 75 GLTQSEVDGGLSFREACRTLAVRH---------RTTELPWASWGDYD-RNQFTRQCRHTG 124
Query: 254 IWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ P+ N KV F +G R + +A+ +AGL +GR H G DDA N L+
Sbjct: 125 T-EYPFTGLHTNAKVAFTAAYGLRRRPGMAQALAVAGLPLEGRHHRGDDDAWNIGALVLE 183
Query: 313 LMHRG 317
+ RG
Sbjct: 184 IAKRG 188
>gi|229020145|ref|ZP_04176921.1| Sporulation inhibitor KapD [Bacillus cereus AH1273]
gi|229026373|ref|ZP_04182730.1| Sporulation inhibitor KapD [Bacillus cereus AH1272]
gi|423388789|ref|ZP_17366015.1| hypothetical protein ICG_00637 [Bacillus cereus BAG1X1-3]
gi|423417166|ref|ZP_17394255.1| hypothetical protein IE3_00638 [Bacillus cereus BAG3X2-1]
gi|228734836|gb|EEL85474.1| Sporulation inhibitor KapD [Bacillus cereus AH1272]
gi|228741154|gb|EEL91376.1| Sporulation inhibitor KapD [Bacillus cereus AH1273]
gi|401108584|gb|EJQ16515.1| hypothetical protein IE3_00638 [Bacillus cereus BAG3X2-1]
gi|401642864|gb|EJS60570.1| hypothetical protein ICG_00637 [Bacillus cereus BAG1X1-3]
Length = 207
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QQFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYAAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFHELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + P+F + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 AGL-EFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|353234855|emb|CCA66876.1| hypothetical protein PIIN_00635 [Piriformospora indica DSM 11827]
Length = 301
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 47/251 (18%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS-SVTGQLEAC--------FQTYVR 182
++ F+V+D E TC +P EIIE+P V++ + + + C F ++VR
Sbjct: 52 KKISTFLVLDVEGTCVPSIGFDWPNEIIEWPVVLLRWDESSKSDECQRLTIVDEFHSFVR 111
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT------NFAVVTW 236
PT L FC +LTGI Q QV+ T E L +L G+ ++ + T
Sbjct: 112 PTFQPKLHPFCTELTGITQEQVNSAPTFPEVLSSCKAFLIKNGVIDSEGNPLQTYIWCTD 171
Query: 237 SNWDCRVMLESECRFKKIWKP---PYFNRWINLKVPFHEVF---------------GGVR 278
WD R + I +P PY + ++++ F E + G
Sbjct: 172 GPWDLRDFFTKQAYISGIQRPSWIPY--KILDVRKTFGEWYTQRYLRRFTKNSRHNGSFS 229
Query: 279 CN----LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN-------SLM 327
N L + +E+ L ++GR H G+DD++N AR+L L RG N
Sbjct: 230 INHSYKLSKQLELLNLTFEGREHSGIDDSRNIARVLIELSARGEPLDAANLDTRPIRKYS 289
Query: 328 WQTNDGSLTWN 338
W +GS+T N
Sbjct: 290 WMGPNGSITAN 300
>gi|21225668|ref|NP_631447.1| hypothetical protein SCO7397 [Streptomyces coelicolor A3(2)]
gi|7160111|emb|CAB76298.1| conserved hypothetical protein SC10G8.25c [Streptomyces coelicolor
A3(2)]
Length = 198
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 140 VIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
VID EATC D P P EI+E +V + + VRPT +++ S FC +L
Sbjct: 16 VIDLEATC-WDGQPPPGEVSEIVEIGLAVVDLDARERVGRHRILVRPTRSRV-SAFCTEL 73
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI Q + DRGV+L+ A D + G +A +W ++D R +C +
Sbjct: 74 TGITQAEADRGVSLARAC---DTLVREHGAGARPWA--SWGDYD-RKQFVRQCAADGVPY 127
Query: 257 P---PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P P N K F E G R + +A+E+AGL GR H G+DDA N A L+
Sbjct: 128 PFGHPAERAHTNAKAVFTEAHGLRRRPGMAQALEIAGLPLAGRHHRGVDDAWNIAALVLR 187
Query: 313 LMHR 316
L R
Sbjct: 188 LADR 191
>gi|323508214|emb|CBQ68085.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 418
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 110/274 (40%), Gaps = 92/274 (33%)
Query: 134 EFQYFVVIDFEATCDKDKN-------------PYPQEIIEFPSVIV--SSVTGQLE--AC 176
EF F+V+D EATC+ + YP EIIEFP V++ + T QL+
Sbjct: 60 EFDTFLVLDVEATCEATRKYRNLQHGFETGSFQYPNEIIEFPVVLLRWNEATHQLDTAGV 119
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEAL------LRHDKWLENKGIKNT- 229
+ +YVRPT L+ FC+DLTG+ Q QVD T S+ + LR +E+ +
Sbjct: 120 YHSYVRPTFRPQLTKFCRDLTGVTQAQVDAAPTWSDVVEEFFRFLRSHDLVEDTSKGKSQ 179
Query: 230 --NFAV---VTWSN---WDCRVMLESEC------RFKKIWKPPYFNR--WINLK------ 267
NF + V W N D R + +C R K PP F R I+++
Sbjct: 180 LHNFRLKRGVAWINHGPADLRDFVIKQCWISGHPRDKTDGAPPIFLRGPLIDIRKGIAGL 239
Query: 268 -------------------VPFHEVFGGVRC---------NLKEAVEMAGLA-------- 291
PF E FGG +KE GL
Sbjct: 240 FKWEQELRVDQTRTASSRSTPFPE-FGGEDGFQVISPPPPAVKEDARSTGLTPHDQSLAG 298
Query: 292 ---------WQGRAHCGLDDAKNTARLLALLMHR 316
+QGR HCG+DD +N +RL+ + R
Sbjct: 299 LLDLLNIGPFQGRQHCGMDDTRNISRLVIEVARR 332
>gi|374705669|ref|ZP_09712539.1| exonuclease [Pseudomonas sp. S9]
Length = 182
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+++VID EAT ++ P + I + + G FQ +VRP L+ FC+DL
Sbjct: 3 HWLVIDLEATTEEGGWPIEEMEIIEIGASMVNAQGHEIDHFQRFVRPLRRPHLTRFCRDL 62
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
T I Q VD LSE ++WL + +A +W +D R LE + R +++
Sbjct: 63 THISQTDVDSAGPLSEIWPHFERWLSQHHPRLIGWA--SWGEYDRR-QLEQDWRLQQLSS 119
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+NLK F + + L A++++G+ + G+ H L DA+NTARLL +++
Sbjct: 120 HLSTLSHLNLKKSFAQARKLQQPVGLHTALQLSGINFSGQQHRALSDARNTARLLPMVL 178
>gi|423394852|ref|ZP_17372053.1| hypothetical protein ICU_00546 [Bacillus cereus BAG2X1-1]
gi|423405712|ref|ZP_17382861.1| hypothetical protein ICY_00397 [Bacillus cereus BAG2X1-3]
gi|401656323|gb|EJS73844.1| hypothetical protein ICU_00546 [Bacillus cereus BAG2X1-1]
gi|401660924|gb|EJS78397.1| hypothetical protein ICY_00397 [Bacillus cereus BAG2X1-3]
Length = 207
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + ++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSSHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + + ++ K K T +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELVEKLAEY--EKKCKPT---IVTWGNMDMKV-LKQNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGVAF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|411003211|ref|ZP_11379540.1| hypothetical protein SgloC_10443 [Streptomyces globisporus C-1027]
Length = 190
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 129 DFQPQEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
D ++ V+D EATC + + P Q EIIE +V G+ A + VRP +
Sbjct: 2 DMGERDAYLLNVVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPARS 61
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVM 244
++ S FC +LTG+ Q +VD G+ +EA +L + + +W ++D R
Sbjct: 62 EV-SPFCTELTGLTQAEVDGGLPFAEACRVLAAEH-------RTGPLPWASWGDYD-RNQ 112
Query: 245 LESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDA 303
+CR P+ R+ N K F +G R + +A+E AGL +GR H G DDA
Sbjct: 113 FTRQCRATGA-AYPFGQRYTNAKAAFTAAYGLRRRPGMVQALETAGLPLEGRHHRGDDDA 171
Query: 304 KNTARLLALLMHRG 317
N L+ L+ RG
Sbjct: 172 WNIGALVLDLVGRG 185
>gi|357013126|ref|ZP_09078125.1| 3-5 exonuclease eri-1 [Paenibacillus elgii B69]
Length = 177
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQTYVRPTCNQLLSDFCKD 195
++V D EATC + EIIE +V + QLE FQT+V+P N LSDFCK
Sbjct: 3 YIVFDLEATCWEHDRTKQNEIIEIGAV---KINEQLEIVDEFQTFVKPILNPWLSDFCKK 59
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q V++ +A+ + W I ++ + +W +D + L +C ++
Sbjct: 60 LTSITQEDVNQADYFPQAIQQFQDW-----IGKEDYFLCSWGLYD-KSQLTKDCELNRL- 112
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+ I++K ++ G R + A++M L +G H G+DDA+N A++ +
Sbjct: 113 GTEWLANHISIKHQHGKLIGKERGVGMARALDMLKLPLEGTHHRGIDDARNIAKIFVRIF 172
Query: 315 HR 316
+
Sbjct: 173 DK 174
>gi|332667991|ref|YP_004450779.1| Exonuclease RNase T and DNA polymerase III [Haliscomenobacter
hydrossis DSM 1100]
gi|332336805|gb|AEE53906.1| Exonuclease RNase T and DNA polymerase III [Haliscomenobacter
hydrossis DSM 1100]
Length = 180
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 8/174 (4%)
Query: 138 FVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
F++ D EATC + + P QE+IE +V+++ G++EA F VRP N LS +C++L
Sbjct: 3 FIIFDLEATCWEGRPPSKVQEVIEIGAVLMNG-YGEVEAEFSRMVRPILNPRLSAYCQEL 61
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
T I+Q +VDR + W + + ++ + +W D +++L+ +C+ I +
Sbjct: 62 TNIKQTEVDRASIFPVVVESFQDW---GLMLDEDYILCSWGGMDKKLLLQ-DCQLHDI-E 116
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ + IN+K + E+ R L+ +VE G + G H L DA+N A++
Sbjct: 117 DEWVDAHINIKHQYMELKRMRRPKGLRASVEAEGFDFTGPQHRALADAQNLAKI 170
>gi|308511231|ref|XP_003117798.1| CRE-CRN-4 protein [Caenorhabditis remanei]
gi|308238444|gb|EFO82396.1| CRE-CRN-4 protein [Caenorhabditis remanei]
Length = 300
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVI--VSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++DFE T D + YP E+I+F + V S T + F YVRP N LS +C D
Sbjct: 11 LLMLDFETTSDGVYHDYPFEVIQFSVAVLDVKSNTISDDVSFNEYVRPVINPKLSSYCAD 70
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI+Q +D+ T + WL+ + FA+V+ S D + + + R +
Sbjct: 71 LTGIKQETLDKADTFLNVYKKFLSWLDQNNFEEKKFALVSDSRQDMWRIAQYQFRLCREP 130
Query: 256 KPPYFNRWINLKVPFHE-VFGGVRCNLKEAVEMA------GLAWQGRAHCGLDDAKNTAR 308
P F ++INL F E + R L+ M G+ G AH + D AR
Sbjct: 131 LPSMFRQYINLWRTFGENMTMEERDKLEGNTYMEKMAIFHGVKSPGGAHNAMIDCLTLAR 190
Query: 309 LLALLMHRGFKFSITNSLM 327
+ ++ G I +L+
Sbjct: 191 ITQKILESGASVYINEALV 209
>gi|229032553|ref|ZP_04188518.1| Sporulation inhibitor KapD [Bacillus cereus AH1271]
gi|228728738|gb|EEL79749.1| Sporulation inhibitor KapD [Bacillus cereus AH1271]
Length = 207
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P+ + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 ARV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|347449386|gb|AEO93427.1| gp167 [Bacillus phage G]
Length = 377
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+VV+D EA D EIIE ++ + + F+T+V+P LS F +DLT
Sbjct: 4 YVVLDLEANND--------EIIEIGAIKLDKNLKTI-GKFRTFVKPLNQIRLSSFIRDLT 54
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I+Q+ +D T + + W+ N I ++TWSN D + L E KI
Sbjct: 55 KIKQVDIDNAKTFDKVYDKFLNWVGNDSI------IITWSNTD-KYFLNKEFNRYKITNK 107
Query: 258 PYFNRWINLKVPFHEV-FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
F R++N++ ++ LK ++ + +G+ H LDDA NT+R++ L +
Sbjct: 108 DIFKRFLNIQRRVSQILLSNDEVGLKRVLKKLKIEPRGQFHRALDDAINTSRVMVKLFNL 167
Query: 317 GFKFSIT 323
+F+IT
Sbjct: 168 LGQFNIT 174
>gi|319647558|ref|ZP_08001778.1| KapD protein [Bacillus sp. BT1B_CT2]
gi|423683640|ref|ZP_17658479.1| sporulation inhibitor KapD [Bacillus licheniformis WX-02]
gi|317390406|gb|EFV71213.1| KapD protein [Bacillus sp. BT1B_CT2]
gi|383440414|gb|EID48189.1| sporulation inhibitor KapD [Bacillus licheniformis WX-02]
Length = 205
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
E ++IDFE T + K +PQ EIIE + IV +V ++ F +Y++P L
Sbjct: 2 EASTLLIIDFEFTMPEGKY-HPQNFFPEIIE--AGIVKAVHDEVVETFSSYIKPKKFPKL 58
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+ CK+ I Q QVD+G+T + AL+ + L+ + N ++TW N D +V L+ C
Sbjct: 59 TRRCKNFLSITQEQVDQGITFN-ALIEKLRELD----PDRNSVIITWGNMDMKV-LKQNC 112
Query: 250 RFKKIWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
F + P P+ +L + + E FG NL +A E G + G+ H LDDA T
Sbjct: 113 MFNHV--PFPFKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDSGTGKQHKALDDAMTTY 170
Query: 308 RLLALL 313
+L L+
Sbjct: 171 KLFRLV 176
>gi|52081642|ref|YP_080433.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404490525|ref|YP_006714631.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52004853|gb|AAU24795.1| KapD [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349527|gb|AAU42161.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 205
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 134 EFQYFVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
E ++IDFE T + K N +P EIIE + IV +V ++ F +Y++P L
Sbjct: 2 EASTLLIIDFEFTMPEGKYHPQNFFP-EIIE--AGIVKTVHDEVVETFSSYIKPKKFPKL 58
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+ CK+ I Q QVD+G+T + AL+ + L+ + N ++TW N D +V L+ C
Sbjct: 59 TRRCKNFLSITQEQVDQGITFN-ALIEKLRELD----PDRNSVIITWGNMDMKV-LKQNC 112
Query: 250 RFKKIWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
F + P P+ +L + + E FG NL +A E G + G+ H LDDA T
Sbjct: 113 MFNHV--PFPFKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDSGTGKQHKALDDAMTTY 170
Query: 308 RLLALL 313
+L L+
Sbjct: 171 KLFRLV 176
>gi|365865345|ref|ZP_09404996.1| hypothetical protein SPW_5300 [Streptomyces sp. W007]
gi|364005178|gb|EHM26267.1| hypothetical protein SPW_5300 [Streptomyces sp. W007]
Length = 190
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
Q Q V+D EATC + + P Q EIIE +V G+ A + VRP +S
Sbjct: 6 QGEQLLNVVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRP-ARSTVS 64
Query: 191 DFCKDLTGIQQIQVDRGVTLSEA----LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
FC +LTG+ Q +VD G++ +EA + H L +W ++D R
Sbjct: 65 PFCTELTGLTQAEVDGGLSFAEACRTLAVEHRTGL---------LPWASWGDYD-RNQFT 114
Query: 247 SECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+CR + P+ N KV F +G R + +A+ +AGL +GR H G DDA N
Sbjct: 115 RQCRATGT-EYPFGQSHTNAKVAFTAAYGLRRRPGMAQALTVAGLPLEGRHHRGDDDAWN 173
Query: 306 TARLLALLMHRG 317
A L+ L RG
Sbjct: 174 IAALVLDLAGRG 185
>gi|146283781|ref|YP_001173934.1| exonuclease [Pseudomonas stutzeri A1501]
gi|145571986|gb|ABP81092.1| exonuclease [Pseudomonas stutzeri A1501]
Length = 217
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 131 QPQEFQYFVVIDFEATCD--------KDKNPYPQEI----IEFPSVIVSSVTGQLE---- 174
Q E ++ + +D EATCD +N + E+ +E + + + QLE
Sbjct: 15 QLGESRWLLCVDLEATCDDYPADLNEAARNAHVLEVQRDEMETIEIGIGLLDVQLEYRIV 74
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
F +VRP L++FC LTGI Q VD +E + +WL + + +
Sbjct: 75 DHFGQFVRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGEWLRPRNTEGWRWC-- 132
Query: 235 TWSNWDCRVMLESECR--FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 292
+W ++D + E R + P R INLK F ++F LK AVE GL W
Sbjct: 133 SWGDYDRNQLKEDAFRAGVDVLLDPA---RHINLKKCFWKIFACRALGLKCAVESMGLLW 189
Query: 293 QGRAHCGLDDAKNTARLLALLM 314
+G H +DDA+N ARL LL+
Sbjct: 190 EGAHHRAIDDARNLARLAQLLL 211
>gi|359783297|ref|ZP_09286512.1| exonuclease [Pseudomonas psychrotolerans L19]
gi|359368724|gb|EHK69300.1| exonuclease [Pseudomonas psychrotolerans L19]
Length = 183
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 135 FQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++++V+D EAT D+ P EIIE +V+V + GQ +Q++V+P LL+ FC
Sbjct: 1 MKHWLVLDLEATTDEGGWPLELMEIIEIGAVMVDA-EGQELGRYQSFVQPRRLPLLTPFC 59
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV-VTWSNWDCRVMLESECRFK 252
+DLT I Q VD L + WL G T A +W ++D R++ +
Sbjct: 60 RDLTHISQADVDGAEPLESTWPAFEAWL---GAYETTLAGWCSWGDFDRRLL-------E 109
Query: 253 KIWKPPYFNRWI------NLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
+ W+ + + NLK F + G R L A+E AGLA+ G H DA+N
Sbjct: 110 RAWREHDLHTHLARVPHRNLKQAFAKARGLARPLGLTAALESAGLAFTGVLHRAETDARN 169
Query: 306 TARLL 310
TA+LL
Sbjct: 170 TAKLL 174
>gi|408676060|ref|YP_006875887.1| hypothetical protein SVEN_0341 [Streptomyces venezuelae ATCC 10712]
gi|328880389|emb|CCA53628.1| hypothetical protein SVEN_0341 [Streptomyces venezuelae ATCC 10712]
Length = 200
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 140 VIDFEATC-DKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
++D EATC D ++ P EIIE +V G+ + + VRP +++ S FC +LT
Sbjct: 9 IVDVEATCWDGERPPGAVSEIIEIGLTVVDLAAGERLSRHRILVRPARSRV-SAFCTELT 67
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
G+ Q +VD G+ + A L + +W ++D R +CR
Sbjct: 68 GLTQAEVDTGLDFAAACR-----LLATTYEAGARPWASWGDYD-RKQFALQCRATGT-PY 120
Query: 258 PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
P+ +R N K F E FG R + +A+E+AGL +GR H G DDA N A L+ L+ R
Sbjct: 121 PFGHRHTNAKAVFTEAFGLRRRPGMAQALEIAGLPLEGRHHRGEDDAWNIAALVLLVAGR 180
>gi|229163892|ref|ZP_04291832.1| Sporulation inhibitor KapD [Bacillus cereus R309803]
gi|228619513|gb|EEK76399.1| Sporulation inhibitor KapD [Bacillus cereus R309803]
Length = 207
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKP-PYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ P P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGV--PFPFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|388546571|ref|ZP_10149845.1| exonuclease [Pseudomonas sp. M47T1]
gi|388275319|gb|EIK94907.1| exonuclease [Pseudomonas sp. M47T1]
Length = 180
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGASLVTR-DGREVDHFQRFVRPHRRPCLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF-AVVTWSNWDCRVMLESECRFKKI 254
LT I Q +D L++ + ++WL G + N V+W ++D + +L S
Sbjct: 62 LTHITQANIDSAAPLTDVWPQFERWL---GHHHANLQGWVSWGDYDRQQLLLS------- 111
Query: 255 WKPPYFNRWI------NLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
W+ + + NLK F + R L A+++AG+ + G+ H L+DA+NTA
Sbjct: 112 WQQHQLHSLLADVPHTNLKQRFAKARKLQRPLGLNGALQLAGMNFNGQQHRALEDARNTA 171
Query: 308 RLLALLM 314
RLL L +
Sbjct: 172 RLLPLTL 178
>gi|297204442|ref|ZP_06921839.1| exonuclease superfamily protein [Streptomyces sviceus ATCC 29083]
gi|297148690|gb|EFH29078.1| exonuclease superfamily protein [Streptomyces sviceus ATCC 29083]
Length = 189
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 140 VIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC P EIIE +V T + + VRP +++ SDFC +LT
Sbjct: 12 VVDVEATCWPGSPPPHAISEIIEIGLTVVDLSTAERVERHRILVRPARSEV-SDFCTELT 70
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
G+ Q +VD G++ EA R L ++ +W ++D R +C K
Sbjct: 71 GLTQDEVDGGLSFGEACRR----LASEHASGAR-PWASWGDYD-RNQFTRQCGATKT-PY 123
Query: 258 PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
P+ R N K F EV+G R + +A+ MAGL+ GR H G DDA N A L+ L R
Sbjct: 124 PFGRRHTNAKAVFTEVYGLRKRPGMAQALGMAGLSLDGRHHRGEDDAWNIAALVLHLAGR 183
>gi|431926089|ref|YP_007239123.1| exonuclease [Pseudomonas stutzeri RCH2]
gi|431824376|gb|AGA85493.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas stutzeri RCH2]
Length = 217
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 131 QPQEFQYFVVIDFEATCDK--------DKNPYPQEI----IEFPSVIVSSVTGQLE---- 174
Q E ++ + +D EATCD+ +N + ++ +E + ++ + QLE
Sbjct: 15 QIGESRWLLCVDLEATCDEYPAGLNEAARNAHVLKVQRDEMETIEIGIALLDVQLEYRIV 74
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
F +VRP L++FC LTGI Q VD +E + WL + + +
Sbjct: 75 DHFGQFVRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGDWLRPRNTEGWRWC-- 132
Query: 235 TWSNWDCRVMLESECR--FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 292
+W ++D + E R + P R INLK F ++F LK AVE GL+W
Sbjct: 133 SWGDYDRNQLKEDAFRAGVDVLLDPA---RHINLKKCFWKIFACRALGLKCAVENIGLSW 189
Query: 293 QGRAHCGLDDAKNTARLLALLM 314
+G H +DDA+N ARL LL+
Sbjct: 190 EGEHHRAIDDARNLARLAQLLL 211
>gi|423400236|ref|ZP_17377409.1| hypothetical protein ICW_00634 [Bacillus cereus BAG2X1-2]
gi|423479058|ref|ZP_17455773.1| hypothetical protein IEO_04516 [Bacillus cereus BAG6X1-1]
gi|401655985|gb|EJS73510.1| hypothetical protein ICW_00634 [Bacillus cereus BAG2X1-2]
gi|402426209|gb|EJV58341.1| hypothetical protein IEO_04516 [Bacillus cereus BAG6X1-1]
Length = 207
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + + +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--RRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P+ + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 ARV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|440790416|gb|ELR11699.1| three prime histone mRNA exonuclease 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 256
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 131 QPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQL 188
+ Q +F+V+D E QEI+EFP IV+ T ++E F YVRP ++
Sbjct: 32 KEQIVDFFLVLDLEGK---------QEILEFPVAIVNVKTLEVEDFFHRYVRPVTFSDEQ 82
Query: 189 LSDFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLENKGIKNT---------------- 229
L+ + G + + + + ++ L++ + WL + G+ ++
Sbjct: 83 LAQYINGKYGKFGLTEKWFESAMPFTDVLVQFNDWLGHHGLLHSILRSEDGEETGEERQA 142
Query: 230 --NFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEM 287
+F VT NWD + + +C K P YF+ W+NLK + + ++ +
Sbjct: 143 AYSFLFVTCGNWDIKTQIPRQCAISKFDMPGYFHEWVNLKDVYLNFYKHKALGMRSMLSG 202
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRG 317
G+ +G H G DD N +++ +++ G
Sbjct: 203 LGIQLEGDHHSGKDDVHNICKIVMRMVNDG 232
>gi|419956272|ref|ZP_14472376.1| exonuclease [Pseudomonas stutzeri TS44]
gi|387966927|gb|EIK51248.1| exonuclease [Pseudomonas stutzeri TS44]
Length = 217
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 131 QPQEFQYFVVIDFEATCDK--------DKNPYPQEI----IEFPSVIVSSVTGQLE---- 174
Q E ++ + +D EATCD+ +N + ++ +E + ++ + QLE
Sbjct: 15 QLGESRWLLCVDLEATCDEYPAGLNEAARNAHVLKVQRDEMETIEIGIALLDVQLEYRIV 74
Query: 175 ACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVV 234
F +VRP L++FC LTGI Q VD +E + WL + + +
Sbjct: 75 DHFGQFVRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGDWLRPRNTEGWRWC-- 132
Query: 235 TWSNWDCRVMLESECR--FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 292
+W ++D + E R + P R INLK F ++F LK AVE GL+W
Sbjct: 133 SWGDYDRNQLKEDAFRAGVDVLLDPA---RHINLKKCFWKIFACRALGLKCAVENIGLSW 189
Query: 293 QGRAHCGLDDAKNTARLLALLM 314
+G H +DDA+N ARL LL+
Sbjct: 190 EGEHHRAIDDARNLARLAQLLL 211
>gi|325275518|ref|ZP_08141430.1| exonuclease [Pseudomonas sp. TJI-51]
gi|324099350|gb|EGB97284.1| exonuclease [Pseudomonas sp. TJI-51]
Length = 183
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 6/178 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + E+IE + +V+ G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEVIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E + WL + A V+W ++D R L E +
Sbjct: 62 LTHISQADVDAAAPFREVWASFEHWLGQH--REQLQAWVSWGDYD-RQQLHQEWHLHGVD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L
Sbjct: 119 SLLRTLAHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPL 176
>gi|229175605|ref|ZP_04303114.1| Sporulation inhibitor KapD [Bacillus cereus MM3]
gi|423462291|ref|ZP_17439087.1| hypothetical protein IEI_05430 [Bacillus cereus BAG5X2-1]
gi|228607863|gb|EEK65176.1| Sporulation inhibitor KapD [Bacillus cereus MM3]
gi|401133562|gb|EJQ41191.1| hypothetical protein IEI_05430 [Bacillus cereus BAG5X2-1]
Length = 207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QQFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + + +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--RRCKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P+ + +L + + + FG + L +A+E G A G+ HC LDDA T +
Sbjct: 115 ARV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|229181208|ref|ZP_04308539.1| Sporulation inhibitor KapD [Bacillus cereus 172560W]
gi|228602262|gb|EEK59752.1| Sporulation inhibitor KapD [Bacillus cereus 172560W]
Length = 207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLLS 190
Q F+ +DFE T K K +P EIIE V + SV G ++E + ++VRP L+
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIE---VGLVSVAGCKVEDTYSSHVRPKTFPSLT 59
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
D CK GI+Q VD+G++ E + + ++ E K +VTW N D +V L+ C
Sbjct: 60 DRCKKFLGIKQEVVDKGISFPELVKKLSEY-ETK----CKPTIVTWGNMDMKV-LKHNCE 113
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 MAGITF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|167034808|ref|YP_001670039.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
gi|166861296|gb|ABY99703.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
Length = 183
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D+ P + EIIE + +V+ G+ FQ +VRP L+ FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWANVERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHGLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L +
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLTL 178
>gi|403164922|ref|XP_003324981.2| hypothetical protein PGTG_06518 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165456|gb|EFP80562.2| hypothetical protein PGTG_06518 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 99/230 (43%), Gaps = 45/230 (19%)
Query: 133 QEFQYFVVIDFEATCDKDKNP----------------YPQEIIEFPSVIVSSVTGQ---- 172
Q F F+ IDFE+TC +P YP EIIE+P +++ T Q
Sbjct: 48 QPFHSFLCIDFESTCINADDPSLNNPTRLSKDQLTWLYPNEIIEWPVILLQWRTAQDGNW 107
Query: 173 --LEAC-FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL--ENKGIK 227
EA ++ +VRP +LS FC DLTGI Q +VD+ +TL L D+ +K
Sbjct: 108 ELYEAGRYRRFVRPVWRPILSQFCIDLTGISQDEVDQAMTLDLVLRDFDQNFVKPHKLFT 167
Query: 228 NTNFAV-VTWSNWDCR---------VMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV 277
N + VT WD R ++ C + + P I+L+ V
Sbjct: 168 TDNQTIWVTDGPWDFRDHFVKSTFLARIDVNCLPRYLRSPISL---IDLRYLLKAFIPNV 224
Query: 278 -------RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+L A+ GL ++G+ H G+DDA N RLLA ++ F
Sbjct: 225 CPFPPPASLSLFNAMAAFGLEFEGQQHSGIDDAHNVGRLLAEMVRCSIPF 274
>gi|206969814|ref|ZP_03230768.1| sporulation inhibitor KapD [Bacillus cereus AH1134]
gi|228955173|ref|ZP_04117183.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229072394|ref|ZP_04205597.1| Sporulation inhibitor KapD [Bacillus cereus F65185]
gi|229082156|ref|ZP_04214621.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-2]
gi|229193176|ref|ZP_04320128.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 10876]
gi|365163124|ref|ZP_09359244.1| hypothetical protein HMPREF1014_04707 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411319|ref|ZP_17388439.1| hypothetical protein IE1_00623 [Bacillus cereus BAG3O-2]
gi|423427027|ref|ZP_17404058.1| hypothetical protein IE5_04716 [Bacillus cereus BAG3X2-2]
gi|423432895|ref|ZP_17409899.1| hypothetical protein IE7_04711 [Bacillus cereus BAG4O-1]
gi|423438326|ref|ZP_17415307.1| hypothetical protein IE9_04507 [Bacillus cereus BAG4X12-1]
gi|423507667|ref|ZP_17484235.1| hypothetical protein IG1_05209 [Bacillus cereus HD73]
gi|449091863|ref|YP_007424304.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|206735502|gb|EDZ52670.1| sporulation inhibitor KapD [Bacillus cereus AH1134]
gi|228590296|gb|EEK48163.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 10876]
gi|228701148|gb|EEL53669.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-2]
gi|228710717|gb|EEL62689.1| Sporulation inhibitor KapD [Bacillus cereus F65185]
gi|228804514|gb|EEM51123.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|363616965|gb|EHL68382.1| hypothetical protein HMPREF1014_04707 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401107853|gb|EJQ15795.1| hypothetical protein IE1_00623 [Bacillus cereus BAG3O-2]
gi|401109642|gb|EJQ17564.1| hypothetical protein IE5_04716 [Bacillus cereus BAG3X2-2]
gi|401114041|gb|EJQ21906.1| hypothetical protein IE7_04711 [Bacillus cereus BAG4O-1]
gi|401117941|gb|EJQ25774.1| hypothetical protein IE9_04507 [Bacillus cereus BAG4X12-1]
gi|402443370|gb|EJV75276.1| hypothetical protein IG1_05209 [Bacillus cereus HD73]
gi|449025620|gb|AGE80783.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLLS 190
Q F+ +DFE T K K +P EIIE V + SV G ++E + ++VRP L+
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIE---VGLVSVAGCKVEDTYSSHVRPKTFPSLT 59
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
D CK GI+Q VD+G++ E + + ++ E K +VTW N D +V L+ C
Sbjct: 60 DRCKKFLGIKQEVVDKGISFPELVKKLSEY-ETK----CKPTIVTWGNMDMKV-LKHNCE 113
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 MAGIAF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|134111855|ref|XP_775463.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258122|gb|EAL20816.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 35/173 (20%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEII---EFPSVIV---------SSVTGQLEACFQT 179
Q ++ F+ D EATC K YP EII EFP V+V V ++++ F++
Sbjct: 179 QRYRSFLCFDVEATCRGGKEFDYPNEIIASPEFPVVLVRWGEPNEEGKRVLEKIDS-FRS 237
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------NKGIKNTNFAV 233
YVRPT +L+DFCK LTGIQQ VD+ E L + + WL+ +KG+K+ +
Sbjct: 238 YVRPTWRPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEGWLDKWDLRGDKGLKDALW-- 295
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVE 286
VT WD R + + PP PF F G N+K AV+
Sbjct: 296 VTDGPWDLRDFVPKQLHI----TPPN---------PFPNYFHGPYLNIKHAVQ 335
>gi|228942073|ref|ZP_04104614.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228975003|ref|ZP_04135563.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981594|ref|ZP_04141890.1| Sporulation inhibitor KapD [Bacillus thuringiensis Bt407]
gi|384188966|ref|YP_005574862.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410677294|ref|YP_006929665.1| putative 3'-5' exonuclease KapD [Bacillus thuringiensis Bt407]
gi|452201373|ref|YP_007481454.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|228778079|gb|EEM26350.1| Sporulation inhibitor KapD [Bacillus thuringiensis Bt407]
gi|228784708|gb|EEM32727.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817589|gb|EEM63673.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942675|gb|AEA18571.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409176423|gb|AFV20728.1| putative 3'-5' exonuclease KapD [Bacillus thuringiensis Bt407]
gi|452106766|gb|AGG03706.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 207
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS ++E + ++VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVAGRKVEDTYSSHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E L++ E K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPE-LVKKLAEYETK----CKPTIVTWGNMDMKV-LKHNCEM 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGIAF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|149603424|ref|XP_001513729.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Ornithorhynchus
anatinus]
Length = 85
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
F PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+ F YV+P + L
Sbjct: 17 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 75
Query: 190 SDFCKDLTGI 199
+ FC +LTGI
Sbjct: 76 TPFCTELTGI 85
>gi|429331283|ref|ZP_19212045.1| exonuclease [Pseudomonas putida CSV86]
gi|428764039|gb|EKX86192.1| exonuclease [Pseudomonas putida CSV86]
Length = 183
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ G+ FQ +V+P L+ FC+
Sbjct: 3 HWLVIDLEATTDDGGWPITEMEIIEIGASLVNR-EGREVDHFQRFVKPRRRPQLTAFCRQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE---SECRFK 252
LT I Q VD ++ + ++WL N + + +W ++D + +L+ +
Sbjct: 62 LTHITQANVDGAAPFADVWEQFERWLGNYQPRLEGW--TSWGDYDRKQLLQEWQANGIDS 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + P+ +NLK F + R L A+++AGL +QG+ H L+DA+NTARLL
Sbjct: 120 LLARVPH----LNLKQRFAKARHLSRPPGLNGALQLAGLQFQGQQHRALEDARNTARLLP 175
Query: 312 LLM 314
L +
Sbjct: 176 LTL 178
>gi|30264951|ref|NP_847328.1| sporulation inhibitor KapD [Bacillus anthracis str. Ames]
gi|47530447|ref|YP_021796.1| sporulation inhibitor KapD [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187770|ref|YP_031023.1| sporulation inhibitor KapD [Bacillus anthracis str. Sterne]
gi|65316901|ref|ZP_00389860.1| COG2176: DNA polymerase III, alpha subunit (gram-positive type)
[Bacillus anthracis str. A2012]
gi|165870872|ref|ZP_02215524.1| sporulation inhibitor KapD [Bacillus anthracis str. A0488]
gi|167634919|ref|ZP_02393237.1| sporulation inhibitor KapD [Bacillus anthracis str. A0442]
gi|167639964|ref|ZP_02398232.1| sporulation inhibitor KapD [Bacillus anthracis str. A0193]
gi|170685855|ref|ZP_02877078.1| sporulation inhibitor KapD [Bacillus anthracis str. A0465]
gi|170706941|ref|ZP_02897398.1| sporulation inhibitor KapD [Bacillus anthracis str. A0389]
gi|177652301|ref|ZP_02934804.1| sporulation inhibitor KapD [Bacillus anthracis str. A0174]
gi|190567138|ref|ZP_03020053.1| sporulation inhibitor KapD [Bacillus anthracis str. Tsiankovskii-I]
gi|196033113|ref|ZP_03100526.1| sporulation inhibitor KapD [Bacillus cereus W]
gi|196040448|ref|ZP_03107748.1| sporulation inhibitor KapD [Bacillus cereus NVH0597-99]
gi|196043866|ref|ZP_03111103.1| sporulation inhibitor KapD [Bacillus cereus 03BB108]
gi|218906109|ref|YP_002453943.1| sporulation inhibitor KapD [Bacillus cereus AH820]
gi|225866886|ref|YP_002752264.1| sporulation inhibitor KapD [Bacillus cereus 03BB102]
gi|227817679|ref|YP_002817688.1| sporulation inhibitor KapD [Bacillus anthracis str. CDC 684]
gi|228917539|ref|ZP_04081084.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929937|ref|ZP_04092951.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936199|ref|ZP_04098999.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948633|ref|ZP_04110911.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229124453|ref|ZP_04253640.1| Sporulation inhibitor KapD [Bacillus cereus 95/8201]
gi|229601886|ref|YP_002869154.1| sporulation inhibitor KapD [Bacillus anthracis str. A0248]
gi|254687243|ref|ZP_05151100.1| sporulation inhibitor KapD [Bacillus anthracis str. CNEVA-9066]
gi|254725256|ref|ZP_05187039.1| sporulation inhibitor KapD [Bacillus anthracis str. A1055]
gi|254735420|ref|ZP_05193128.1| sporulation inhibitor KapD [Bacillus anthracis str. Western North
America USA6153]
gi|254740687|ref|ZP_05198378.1| sporulation inhibitor KapD [Bacillus anthracis str. Kruger B]
gi|254753051|ref|ZP_05205087.1| sporulation inhibitor KapD [Bacillus anthracis str. Vollum]
gi|254761393|ref|ZP_05213414.1| sporulation inhibitor KapD [Bacillus anthracis str. Australia 94]
gi|301056400|ref|YP_003794611.1| sporulation inhibitor KapD [Bacillus cereus biovar anthracis str.
CI]
gi|376268819|ref|YP_005121531.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus cereus
F837/76]
gi|386738782|ref|YP_006211963.1| Sporulation inhibitor KapD [Bacillus anthracis str. H9401]
gi|421507858|ref|ZP_15954775.1| sporulation inhibitor KapD [Bacillus anthracis str. UR-1]
gi|421639973|ref|ZP_16080561.1| sporulation inhibitor KapD [Bacillus anthracis str. BF1]
gi|423554614|ref|ZP_17530940.1| hypothetical protein IGW_05244 [Bacillus cereus ISP3191]
gi|30259626|gb|AAP28814.1| sporulation inhibitor KapD [Bacillus anthracis str. Ames]
gi|47505595|gb|AAT34271.1| sporulation inhibitor KapD [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181697|gb|AAT57073.1| sporulation inhibitor KapD [Bacillus anthracis str. Sterne]
gi|164713381|gb|EDR18906.1| sporulation inhibitor KapD [Bacillus anthracis str. A0488]
gi|167512045|gb|EDR87423.1| sporulation inhibitor KapD [Bacillus anthracis str. A0193]
gi|167529669|gb|EDR92418.1| sporulation inhibitor KapD [Bacillus anthracis str. A0442]
gi|170128044|gb|EDS96914.1| sporulation inhibitor KapD [Bacillus anthracis str. A0389]
gi|170670319|gb|EDT21059.1| sporulation inhibitor KapD [Bacillus anthracis str. A0465]
gi|172082307|gb|EDT67373.1| sporulation inhibitor KapD [Bacillus anthracis str. A0174]
gi|190561642|gb|EDV15612.1| sporulation inhibitor KapD [Bacillus anthracis str. Tsiankovskii-I]
gi|195994542|gb|EDX58497.1| sporulation inhibitor KapD [Bacillus cereus W]
gi|196025202|gb|EDX63872.1| sporulation inhibitor KapD [Bacillus cereus 03BB108]
gi|196028580|gb|EDX67187.1| sporulation inhibitor KapD [Bacillus cereus NVH0597-99]
gi|218535783|gb|ACK88181.1| sporulation inhibitor KapD [Bacillus cereus AH820]
gi|225790491|gb|ACO30708.1| sporulation inhibitor KapD [Bacillus cereus 03BB102]
gi|227005614|gb|ACP15357.1| sporulation inhibitor KapD [Bacillus anthracis str. CDC 684]
gi|228659001|gb|EEL14654.1| Sporulation inhibitor KapD [Bacillus cereus 95/8201]
gi|228810940|gb|EEM57283.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823446|gb|EEM69278.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829734|gb|EEM75357.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842106|gb|EEM87208.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266294|gb|ACQ47931.1| sporulation inhibitor KapD [Bacillus anthracis str. A0248]
gi|300378569|gb|ADK07473.1| sporulation inhibitor KapD [Bacillus cereus biovar anthracis str.
CI]
gi|364514619|gb|AEW58018.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus cereus
F837/76]
gi|384388634|gb|AFH86295.1| Sporulation inhibitor KapD [Bacillus anthracis str. H9401]
gi|401180497|gb|EJQ87656.1| hypothetical protein IGW_05244 [Bacillus cereus ISP3191]
gi|401821964|gb|EJT21117.1| sporulation inhibitor KapD [Bacillus anthracis str. UR-1]
gi|403392806|gb|EJY90054.1| sporulation inhibitor KapD [Bacillus anthracis str. BF1]
Length = 207
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ SE + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFSELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCE- 113
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
K P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 KAGVDFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|427733803|ref|YP_007053347.1| exonuclease [Rivularia sp. PCC 7116]
gi|427368844|gb|AFY52800.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Rivularia sp. PCC 7116]
Length = 181
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 137 YFVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
YF+++D EATC D + +E IIE +V+++ T +++ +Q +++P + L+ FC
Sbjct: 4 YFLIVDVEATCCNDGSIPKEEMEIIEIGAVMLNRSTWAIDSEYQQFIKPVRHPKLTSFCT 63
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+LT I Q ++ T E + + KW+++ KN +W N+D + +C F +
Sbjct: 64 ELTSITQKNLEPAPTFPEVIPQFKKWIDSYP-KNI---FCSWGNYDKNQFI-LDCSFHHL 118
Query: 255 WKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P+ N+K F + R + +A++ GL +QG H G+DDA+N A ++
Sbjct: 119 -PYPFGTEHRNIKKEFSLYSDNKKKRFGVMQALQYLGLEFQGTHHRGIDDARNIAAIVKY 177
Query: 313 L 313
+
Sbjct: 178 I 178
>gi|30022952|ref|NP_834583.1| sporulation inhibitor KapD [Bacillus cereus ATCC 14579]
gi|75760253|ref|ZP_00740306.1| Exonuclease KapD [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218234761|ref|YP_002369702.1| sporulation inhibitor KapD [Bacillus cereus B4264]
gi|218900061|ref|YP_002448472.1| sporulation inhibitor KapD [Bacillus cereus G9842]
gi|228903410|ref|ZP_04067538.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 4222]
gi|228910746|ref|ZP_04074555.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 200]
gi|228923644|ref|ZP_04086923.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228961163|ref|ZP_04122785.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228968015|ref|ZP_04129023.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar sotto
str. T04001]
gi|229048603|ref|ZP_04194161.1| Sporulation inhibitor KapD [Bacillus cereus AH676]
gi|229112353|ref|ZP_04241891.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-15]
gi|229130170|ref|ZP_04259130.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-Cer4]
gi|229147462|ref|ZP_04275810.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST24]
gi|229153098|ref|ZP_04281278.1| Sporulation inhibitor KapD [Bacillus cereus m1550]
gi|296505353|ref|YP_003667053.1| sporulation inhibitor KapD [Bacillus thuringiensis BMB171]
gi|402563587|ref|YP_006606311.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-771]
gi|423363504|ref|ZP_17341002.1| hypothetical protein IC1_05479 [Bacillus cereus VD022]
gi|423386418|ref|ZP_17363673.1| hypothetical protein ICE_04163 [Bacillus cereus BAG1X1-2]
gi|423566205|ref|ZP_17542480.1| hypothetical protein II5_05608 [Bacillus cereus MSX-A1]
gi|423583103|ref|ZP_17559214.1| hypothetical protein IIA_04618 [Bacillus cereus VD014]
gi|423588763|ref|ZP_17564849.1| hypothetical protein IIE_04174 [Bacillus cereus VD045]
gi|423631622|ref|ZP_17607369.1| hypothetical protein IK5_04472 [Bacillus cereus VD154]
gi|423634221|ref|ZP_17609874.1| hypothetical protein IK7_00630 [Bacillus cereus VD156]
gi|423644103|ref|ZP_17619720.1| hypothetical protein IK9_04047 [Bacillus cereus VD166]
gi|423650788|ref|ZP_17626358.1| hypothetical protein IKA_04575 [Bacillus cereus VD169]
gi|423657843|ref|ZP_17633142.1| hypothetical protein IKG_04831 [Bacillus cereus VD200]
gi|434378059|ref|YP_006612703.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-789]
gi|29898511|gb|AAP11784.1| Exonuclease KapD [Bacillus cereus ATCC 14579]
gi|74492248|gb|EAO55411.1| Exonuclease KapD [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218162718|gb|ACK62710.1| sporulation inhibitor KapD [Bacillus cereus B4264]
gi|218544233|gb|ACK96627.1| sporulation inhibitor KapD [Bacillus cereus G9842]
gi|228630364|gb|EEK87013.1| Sporulation inhibitor KapD [Bacillus cereus m1550]
gi|228636007|gb|EEK92489.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST24]
gi|228653284|gb|EEL09162.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-Cer4]
gi|228671001|gb|EEL26307.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-15]
gi|228722722|gb|EEL74109.1| Sporulation inhibitor KapD [Bacillus cereus AH676]
gi|228791686|gb|EEM39280.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228798510|gb|EEM45501.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228836005|gb|EEM81367.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848697|gb|EEM93542.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 200]
gi|228856231|gb|EEN00763.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 4222]
gi|296326405|gb|ADH09333.1| sporulation inhibitor KapD [Bacillus thuringiensis BMB171]
gi|401075239|gb|EJP83625.1| hypothetical protein IC1_05479 [Bacillus cereus VD022]
gi|401192519|gb|EJQ99534.1| hypothetical protein II5_05608 [Bacillus cereus MSX-A1]
gi|401210012|gb|EJR16767.1| hypothetical protein IIA_04618 [Bacillus cereus VD014]
gi|401225571|gb|EJR32118.1| hypothetical protein IIE_04174 [Bacillus cereus VD045]
gi|401263759|gb|EJR69881.1| hypothetical protein IK5_04472 [Bacillus cereus VD154]
gi|401271895|gb|EJR77897.1| hypothetical protein IK9_04047 [Bacillus cereus VD166]
gi|401281004|gb|EJR86919.1| hypothetical protein IKA_04575 [Bacillus cereus VD169]
gi|401281467|gb|EJR87378.1| hypothetical protein IK7_00630 [Bacillus cereus VD156]
gi|401288708|gb|EJR94452.1| hypothetical protein IKG_04831 [Bacillus cereus VD200]
gi|401632775|gb|EJS50559.1| hypothetical protein ICE_04163 [Bacillus cereus BAG1X1-2]
gi|401792239|gb|AFQ18278.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-771]
gi|401876616|gb|AFQ28783.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-789]
Length = 207
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLLS 190
Q F+ +DFE T K K +P EIIE V + SV G ++E + ++VRP L+
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIE---VGLVSVAGCKVEDTYSSHVRPKTFPSLT 59
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
D CK GI+Q VD+G++ E L++ E K +VTW N D +V L+ C
Sbjct: 60 DRCKKFLGIKQEVVDKGISFPE-LVKKLAEYETK----CKPTIVTWGNMDMKV-LKHNCE 113
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 MAGIAF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|321259047|ref|XP_003194244.1| hypothetical protein CGB_E2360C [Cryptococcus gattii WM276]
gi|317460715|gb|ADV22457.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 593
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 17/113 (15%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV---------SSVTGQLEACFQTYVR 182
Q ++ F+ D EATC K YP EIIEFP V+V V ++++ F++YVR
Sbjct: 178 QRYRSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPDEEGKRVLEKIDS-FRSYVR 236
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------NKGIKNT 229
PT +L+DFCK LTGIQQ VD+ E L + ++WL+ +KG+K+
Sbjct: 237 PTWRPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEEWLDKWDLRGDKGLKDA 289
>gi|423527253|ref|ZP_17503698.1| hypothetical protein IGE_00805 [Bacillus cereus HuB1-1]
gi|402453838|gb|EJV85637.1| hypothetical protein IGE_00805 [Bacillus cereus HuB1-1]
Length = 207
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTG-QLEACFQTYVRPTCNQLLS 190
Q F+ +DFE T K K +P EIIE V + SV G ++E + ++VRP L+
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIE---VGLVSVAGCKVEDTYSSHVRPKTFPSLT 59
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
D CK GI+Q VD+G++ E L++ E K +VTW N D +V L+ C
Sbjct: 60 DRCKKFLGIKQEVVDKGISFPE-LVKKLAEYETK----CKPTIVTWGNMDMKV-LKHNCE 113
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P+F + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 MAGIVF-PFFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 310 LALL 313
L+
Sbjct: 173 FKLV 176
>gi|395448144|ref|YP_006388397.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
gi|388562141|gb|AFK71282.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
Length = 183
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQADVDNAAPFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHDLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L +
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLTL 178
>gi|441503050|ref|ZP_20985057.1| hypothetical protein C942_04419 [Photobacterium sp. AK15]
gi|441429266|gb|ELR66721.1| hypothetical protein C942_04419 [Photobacterium sp. AK15]
Length = 184
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + + EIIE + V+G++ Q +V+P +++ S FC
Sbjct: 3 FNRIVCFDLEMCCWNDGRESRTGEIIEIGVAELDLVSGEIVRRAQHFVKPEHDEV-SPFC 61
Query: 194 KDLTGIQ-QIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ ++ G L+ L K +E K G ++ +A W D +L++EC
Sbjct: 62 TELTGIKPEVIKKNGKPLATIL----KSIEKKFGGRHKIYA--AWGRDD--QILQAECEE 113
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K I P F ++NL F RC + A+EMAG+ W+GR H G DDA N ARL
Sbjct: 114 KGIKVP--FTEYLNLATLFRLQRHVNNKRCGQRAAMEMAGIGWEGRQHSGYDDAYNLARL 171
>gi|449547645|gb|EMD38613.1| hypothetical protein CERSUDRAFT_105200 [Ceriporiopsis subvermispora
B]
Length = 296
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 42/230 (18%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIV-------SSVTGQLEAC--FQTYV 181
Q + F+V+D EATC + YP EIIE+P ++ + LE F+++V
Sbjct: 41 QPYDAFLVLDVEATCIEGSPRGEYPNEIIEWPVCLLRWRDKNDNGEAKSLEVVDEFRSFV 100
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVV 234
RPT LSDFCK+LTGI Q QVD T ++ ++RH G + T F
Sbjct: 101 RPTWRPELSDFCKNLTGITQQQVDDTPTFAKVMESFRDFMIRHGLIDVETGKRLTRFCWC 160
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYF-NRWINLKVPFHEVFGGV--------RCNLKEA- 284
+D R + +C K+ P + ++++V + + N+ A
Sbjct: 161 CDGPYDIRDFVVKQCFMSKMQMPTWVQGDMMDVRVLVSDWHASTMQRRPRRNKKNISRAF 220
Query: 285 -------------VEMAGL-AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+++ GL ++GR H G+DD +N R++ + RG K
Sbjct: 221 PLPKRMPLTISRQLQVLGLPPFEGRPHSGIDDTRNITRIVIEVGRRGMKL 270
>gi|148546859|ref|YP_001266961.1| exonuclease [Pseudomonas putida F1]
gi|397693483|ref|YP_006531363.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|421525362|ref|ZP_15971977.1| exonuclease [Pseudomonas putida LS46]
gi|148510917|gb|ABQ77777.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas putida F1]
gi|397330213|gb|AFO46572.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|402750835|gb|EJX11354.1| exonuclease [Pseudomonas putida LS46]
Length = 183
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + EIIE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQADVDNAAPFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHGLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L +
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLTL 178
>gi|431803551|ref|YP_007230454.1| exonuclease [Pseudomonas putida HB3267]
gi|430794316|gb|AGA74511.1| exonuclease [Pseudomonas putida HB3267]
Length = 183
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVTR-DGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD + E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHGLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPL 176
>gi|421530501|ref|ZP_15976978.1| exonuclease [Pseudomonas putida S11]
gi|402212047|gb|EJT83467.1| exonuclease [Pseudomonas putida S11]
Length = 183
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVTR-DGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD + E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHGLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPL 176
>gi|58267302|ref|XP_570807.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227041|gb|AAW43500.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 602
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 17/113 (15%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV---------SSVTGQLEACFQTYVR 182
Q ++ F+ D EATC K YP EIIEFP V+V V ++++ F++YVR
Sbjct: 179 QRYRSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPNEEGKRVLEKIDS-FRSYVR 237
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------NKGIKNT 229
PT +L+DFCK LTGIQQ VD+ E L + + WL+ +KG+K+
Sbjct: 238 PTWRPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEGWLDKWDLRGDKGLKDA 290
>gi|388855258|emb|CCF51152.1| uncharacterized protein [Ustilago hordei]
Length = 460
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 122/308 (39%), Gaps = 111/308 (36%)
Query: 134 EFQYFVVIDFEATCDKDKN-------------PYPQEIIEFPSVIV--SSVTGQLE--AC 176
EF F+V+D EATC+ + YP EIIEFP V++ + + QLE
Sbjct: 63 EFDTFLVLDVEATCEATRKYRNINHGFETGCFQYPNEIIEFPVVLLKWNKDSQQLETTGI 122
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVD-----RGVTLSEALLR----HDKWLENKGIK 227
F +YVRPT L+ FC+DLTG+ Q Q + +GV E L R HD +EN G
Sbjct: 123 FHSYVRPTFRPKLAKFCRDLTGVTQAQANAAPVWKGVV--EKLFRFLESHD-LVENTGTG 179
Query: 228 NT---NFAV---VTWSN---WDCRVMLESEC------RFKKIWKPPYFNR--WINLK--- 267
NF + V W N D R + + R K PP F R I+++
Sbjct: 180 EPHLQNFRLRRGVAWINHGPADLRDFVIKQSWISALPRDKHHGGPPIFLRGPLIDIRKGI 239
Query: 268 -----------------------VPFHEVFG--------------GVRCNLKEAVEMAGL 290
PF E G G +K+ + GL
Sbjct: 240 ASLFKWEQELRAEQQSRGSSSRSTPFPEFGGEDGFQVIPPQPSNAGAASGVKKELRTTGL 299
Query: 291 A-----------------WQGRAHCGLDDAKNTARLLA------LLMHRGFKFSITNSLM 327
+ +QGR HCGLDD KN ARL LL +G + ++ S
Sbjct: 300 SPHEQSLAGLLEVMNIGPFQGRQHCGLDDTKNIARLAVEIARRILLASQGTQLLLSKS-- 357
Query: 328 WQTNDGSL 335
+++ DG +
Sbjct: 358 YESVDGQI 365
>gi|440694628|ref|ZP_20877231.1| exonuclease [Streptomyces turgidiscabies Car8]
gi|440283339|gb|ELP70625.1| exonuclease [Streptomyces turgidiscabies Car8]
Length = 194
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 136 QYFV-VIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+Y V V+D EATC P EIIE ++ G+ A + V+P +S+F
Sbjct: 7 EYLVNVVDVEATCWAGSQPPGAVSEIIEVGLTVIDLAAGERLARHRILVKPV-RSTVSEF 65
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LTG+ Q +VD+GV+ +EA + L + T V+W ++D R +C+
Sbjct: 66 CTELTGLTQHEVDQGVSFAEAC----RLLAAEHRAGTR-PWVSWGDYD-RHQFTRQCQAT 119
Query: 253 KIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ N K F E +G R + +A+++AG +GR H G DDA N A L+
Sbjct: 120 RT-SYPFGRHHTNAKAVFTEAYGLRKRPGMAQALKIAGRQLEGRHHRGEDDAWNIAALVL 178
Query: 312 LLMHR 316
L R
Sbjct: 179 HLSQR 183
>gi|386011207|ref|YP_005929484.1| Exonuclease [Pseudomonas putida BIRD-1]
gi|313497913|gb|ADR59279.1| Exonuclease [Pseudomonas putida BIRD-1]
Length = 183
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVTR-EGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHSLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L +
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLTL 178
>gi|71004294|ref|XP_756813.1| hypothetical protein UM00666.1 [Ustilago maydis 521]
gi|46095601|gb|EAK80834.1| hypothetical protein UM00666.1 [Ustilago maydis 521]
Length = 419
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 98/299 (32%)
Query: 134 EFQYFVVIDFEATCDKDKN-------------PYPQEIIEFPSVIV--SSVTGQLEAC-- 176
EF F+V+D EATC+ + +P EIIEFP V++ + T QL+
Sbjct: 58 EFDTFLVLDVEATCESTRKYRNLNHGYETGSFQFPNEIIEFPVVLLRWNENTHQLDTVDV 117
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNT------ 229
F +YVRPT L+ FC+DLTG+ Q QVD ++ L+ ++L +++T
Sbjct: 118 FHSYVRPTFRPRLTKFCRDLTGVTQAQVDAAPLWNDVLISFYRFLWSYDLVEDTLTGSSH 177
Query: 230 --NFAV---VTWSN---WDCRVMLESEC------RFKKIWKPPYFNR--WINLKVPFHEV 273
NF + V W N D R + +C R + PP F R I+++ +
Sbjct: 178 LHNFRLRRGVAWINHGPADLRDFVIKQCWISGHPRDRNQGAPPIFLRGPLIDIRKGIASL 237
Query: 274 -----------------------FGG------------VRCNLKEAVEMAGLA------- 291
FGG V ++E V GL+
Sbjct: 238 FKWEQELKAEQGRTTTSRSTLLEFGGEDGFQVISPPTQVASTVREDVRSTGLSPHEQSLA 297
Query: 292 ----------WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLM-----WQTNDGSL 335
+QGR HCG+DD +N AR++ + R +F+ + M +++ DG +
Sbjct: 298 GLLDLLGIGPFQGRQHCGMDDTRNIARIVVEVTRR-IRFAAKGTQMLLSKSYESVDGQM 355
>gi|339488533|ref|YP_004703061.1| exonuclease [Pseudomonas putida S16]
gi|338839376|gb|AEJ14181.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
S16]
Length = 183
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVIEMEVIEIGASLVTR-DGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD + E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQHGLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPL 176
>gi|159463698|ref|XP_001690079.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284067|gb|EDP09817.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 74.3 bits (181), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE V++ + + ++ FQ YVRPT + LL FC +LTGI+Q QVD L E L R
Sbjct: 1 EIIELSCVLLDAHSLEVRGEFQAYVRPTEHPLLDPFCVELTGIEQAQVDTAAPLGEVLER 60
Query: 217 HDKWLENKGI----KNTNFAVVTWSNWDCRV 243
D WL +G + + VTW++WD +V
Sbjct: 61 LDGWLRGRGALPARPDCSLLPVTWTDWDLKV 91
>gi|290963155|ref|YP_003494337.1| hypothetical protein SCAB_88781 [Streptomyces scabiei 87.22]
gi|260652681|emb|CBG75814.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 195
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 134 EFQYFVVIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
E VID EATC D P P EIIE +V G+ + + VRP +S
Sbjct: 4 ESSLLNVIDVEATC-WDGQPPPGSVNEIIEIGLTVVDVSAGRRVSRHRLLVRP-VRSTVS 61
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
DFC +LTG+ Q +V++GVT +EA +E +A +W +D R + +
Sbjct: 62 DFCTELTGLTQAEVEQGVTFAEAC---RILVEEYEAGERPWA--SWGEYD-RRQFARQSQ 115
Query: 251 FKKIWKP---PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+ P P N K F E +G R + A+++AGL +GR H G DDA N
Sbjct: 116 ADAVAYPFGHPTERTHTNAKAVFTEAYGLRRKPGMAHALQIAGLPLEGRHHRGEDDAWNI 175
Query: 307 ARLLALLMHRG 317
A L+ L RG
Sbjct: 176 AALVLDLAGRG 186
>gi|26990938|ref|NP_746363.1| exonuclease [Pseudomonas putida KT2440]
gi|24985960|gb|AAN69827.1|AE016622_4 exonuclease [Pseudomonas putida KT2440]
Length = 183
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT D P + E+IE + +V+ G+ FQ +V+P L+ FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVTR-EGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I Q VD E ++WL + + A V+W ++D R L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWASFERWLGHH--RGQLQAWVSWGDYD-RQQLHQEWQQYSLD 118
Query: 256 KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
INLK F + R L A+++AG+ + G+ H L+DA+NTARLL L +
Sbjct: 119 SLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLTL 178
>gi|338813768|ref|ZP_08625857.1| sporulation inhibitor KapD [Acetonema longum DSM 6540]
gi|337274260|gb|EGO62808.1| sporulation inhibitor KapD [Acetonema longum DSM 6540]
Length = 205
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F+++DFE T ++ P+ EIIE +V+++ + +Q+YVRP L++ C
Sbjct: 8 FLIVDFEFTTHRNGPGRPRAFFPEIIEAGAVLLTPPAYEAGDSYQSYVRPRFFPRLTEEC 67
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLEN--KGIKNTNFAVVTWSNWDCRVMLESECRF 251
+++T IQQ +D G+T+ +K LE+ + + +V W N D R ++ + C
Sbjct: 68 RNITLIQQRDIDAGITM-------EKMLEDLSQNYRAGLTYIVAWGNAD-RDVIANACVR 119
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
KI P ++ +I+L + ++ R +LK A+ + G +H LDDA NTA++L
Sbjct: 120 YKIDCPFSWDDYIDLAEEYKVLYSLERLASLKSALIERKITQTGLSHLALDDALNTAQVL 179
Query: 311 ALLMHRGFK 319
++ G++
Sbjct: 180 KKMLAEGWQ 188
>gi|433605464|ref|YP_007037833.1| hypothetical protein BN6_36650 [Saccharothrix espanaensis DSM
44229]
gi|407883317|emb|CCH30960.1| hypothetical protein BN6_36650 [Saccharothrix espanaensis DSM
44229]
Length = 200
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 134 EFQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
E V+D EATC + P P EI+E +V +G + VRP +S
Sbjct: 11 ENALLNVVDVEATCWDGQPPPGQPSEIVEIGLTVVDLASGTRVGKHRVLVRPR-RSTVSA 69
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
FC +LTG+ Q +VD G++ +EA + L + T +W ++D R +C+
Sbjct: 70 FCTELTGLTQAEVDTGLSFAEAC----RLLATEHDAGTR-PWASWGDYD-RNQFTRQCQA 123
Query: 252 KKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P+ N KV F G R + +A+E+AGL +GR H G DDA N A L+
Sbjct: 124 TGT-RYPFGRVHTNAKVAFTAAHGLRKRPGMSQALEIAGLPLEGRHHRGEDDAWNIAALV 182
Query: 311 ALLMHR 316
L R
Sbjct: 183 LHLRAR 188
>gi|228988155|ref|ZP_04148253.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771566|gb|EEM20034.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 207
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QQFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCE- 113
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
K P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 KAGVDFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|47566945|ref|ZP_00237662.1| exonuclease KapD [Bacillus cereus G9241]
gi|52140617|ref|YP_086215.1| sporulation inhibitor KapD [Bacillus cereus E33L]
gi|229158512|ref|ZP_04286572.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 4342]
gi|47556263|gb|EAL14597.1| exonuclease KapD [Bacillus cereus G9241]
gi|51974086|gb|AAU15636.1| sporulation inhibitor [Bacillus cereus E33L]
gi|228624948|gb|EEK81715.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 4342]
Length = 207
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCE- 113
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
K P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 KAGVDFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|302562577|ref|ZP_07314919.1| exonuclease superfamily protein [Streptomyces griseoflavus Tu4000]
gi|302480195|gb|EFL43288.1| exonuclease superfamily protein [Streptomyces griseoflavus Tu4000]
Length = 194
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC P + EIIE ++ G+ A + VRP +S FC +LT
Sbjct: 12 VVDVEATCWAGSQPPGEVSEIIEIGLAVLDLDAGERLARHRILVRPV-RSTVSKFCSELT 70
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV--VTWSNWDCRVMLESECRFKKIW 255
G+ Q +VD+G+ +EA + ++ A V+W ++D R +C +
Sbjct: 71 GLTQHEVDQGLAFAEAC-------QQLAAEHCAGARPWVSWGDYD-RFQFTRQCHATRT- 121
Query: 256 KPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P+ R N K F E R + +A+E+AGL +GR H G DDA N A L+ L
Sbjct: 122 PYPFGRRHTNAKAVFTEAHSLRKRPGMAQALEIAGLRLEGRHHRGEDDAWNIAALVLHLA 181
Query: 315 HRGF 318
RG
Sbjct: 182 ERGV 185
>gi|49480343|ref|YP_038931.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118480004|ref|YP_897155.1| sporulation inhibitor KapD [Bacillus thuringiensis str. Al Hakam]
gi|229094008|ref|ZP_04225095.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-42]
gi|229187151|ref|ZP_04314297.1| Sporulation inhibitor KapD [Bacillus cereus BGSC 6E1]
gi|49331899|gb|AAT62545.1| sporulation inhibitor [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118419229|gb|ABK87648.1| sporulation inhibitor [Bacillus thuringiensis str. Al Hakam]
gi|228596320|gb|EEK53994.1| Sporulation inhibitor KapD [Bacillus cereus BGSC 6E1]
gi|228689392|gb|EEL43208.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-42]
Length = 207
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + + ++ K K T +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFLELVEKLAEY--EKKCKPT---IVTWGNMDMKV-LKHNCEK 114
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AEV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|120554172|ref|YP_958523.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120324021|gb|ABM18336.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 279
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQ-------EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
+++D EATC + + P + EIIEF +++ TG+L VRP N L
Sbjct: 13 ILIVDLEATCWESSRLPNGERQSIGNMEIIEF-GCALATRTGELLDSRSFLVRPVRNPDL 71
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
S FC+ LTGI Q V+ E + D+WL G + +W N+D R +++E
Sbjct: 72 SAFCRSLTGISQAMVNAAPPYPEVVRALDEWL---GQPAESLIWCSWGNYD-RHHIQAES 127
Query: 250 RFKKIWKPPYFN-RWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
I P + + +NLK + G + L A+ LA++GR H G+DDA+N
Sbjct: 128 EAHGI-APRFLSCPHLNLKRIWRRSTGQKKKTGLASALAFHNLAFEGRPHRGVDDARNIV 186
Query: 308 RLLALL 313
RLL +
Sbjct: 187 RLLPFM 192
>gi|304406144|ref|ZP_07387801.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus
curdlanolyticus YK9]
gi|304344728|gb|EFM10565.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus
curdlanolyticus YK9]
Length = 223
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEA-CFQTYVRPTCNQLLSDFCKD 195
++V D E T + K Y +IIE +V + G +E FQTYV+P N++++ +
Sbjct: 4 YIVYDLEFTVLR-KQQYAADIIEIGAVKLTDGDQGPIEIDRFQTYVKPERNKVITTHTTE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q QVD T +A+ +W I +T + + +W D + +CR KI
Sbjct: 63 FTGITQEQVDAAPTFPDAIDLFRQW-----IGDTTYYLCSWGP-DDKQHFVRQCRDMKI- 115
Query: 256 KPPYFNRWINLKVPFHEVFG---GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ + +L++ + ++ G R L A+E AG + G H LDDA NTARL
Sbjct: 116 ELNWLRNMNDLQLYYTKLQGNDASKRIGLARALETAGFVFDGAQHRALDDAANTARLFVR 175
Query: 313 L 313
+
Sbjct: 176 M 176
>gi|12654485|gb|AAH01072.1| ERI3 protein [Homo sapiens]
gi|13325281|gb|AAH04456.1| ERI3 protein [Homo sapiens]
Length = 128
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 204 VDRGVTLSEALLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLESECRFKKIWKPPYFN 261
VD +L + L R D+W+ +G+ + N VT +WD +VML +C++ + YF
Sbjct: 2 VDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFK 61
Query: 262 RWINLKVPFHEVFGGVRCNLKEA-VEM-AGLAWQ--GRAHCGLDDAKNTARLLALLMHRG 317
+WINLK + G C K ++M GL+ Q GR H G+DD KN A ++ L +RG
Sbjct: 62 QWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 118
Query: 318 FKFSITN 324
F F T+
Sbjct: 119 FIFKQTS 125
>gi|118346813|ref|XP_977115.1| exonuclease family protein [Tetrahymena thermophila]
gi|89288652|gb|EAR86640.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1363
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
VIDFE N EIIEFP +++ ++ F TYV+PT ++ + +TGI
Sbjct: 710 VIDFEC------NQPGYEIIEFPVLVIDLKKERIIDTFHTYVKPTTFPKINPYISKITGI 763
Query: 200 QQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPY 259
QQ V + + + + + +L+ K+ ++ + DC M I
Sbjct: 764 QQKDVANAPSFVQVIQKVEAFLQ--KYKDYEGCILYDCDSDCNYMKSEFINKNYIPTSDV 821
Query: 260 FNRWINLKVPF-HEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG 317
F +INL+ F E+ GGV +L A ++ + +QG H G+DDA+N A + L+ RG
Sbjct: 822 FFSYINLRNVFPLEISGGVINKSLSHAQQVLQMEFQGCKHKGIDDARNQALVCIELVKRG 881
Query: 318 FKFS 321
+ F+
Sbjct: 882 YSFT 885
>gi|295707016|ref|YP_003600091.1| exonuclease [Bacillus megaterium DSM 319]
gi|384044497|ref|YP_005492514.1| exonuclease RNase T and DNA polymerase III [Bacillus megaterium
WSH-002]
gi|294804675|gb|ADF41741.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium DSM
319]
gi|345442188|gb|AEN87205.1| Exonuclease RNase T and DNA polymerase III [Bacillus megaterium
WSH-002]
Length = 204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ IDFE T + K +P+ EIIE V V + ++ F +YV+PT L++ C
Sbjct: 7 YLFIDFEFTMPEYKG-FPKGFFPEIIEVGLVFVKN--QEIIDRFSSYVQPTHFTKLTERC 63
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I+Q QV+ G+TL + + R + N ++TW N D +V+ +C K
Sbjct: 64 KSFLHIEQNQVNEGITLEQLVQRLGMY--------KNSTIITWGNMDMKVL--RQCCQKN 113
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P+ + I+L + + FG + L +AV+ G G+ HC LDDA T + L
Sbjct: 114 KVPFPFTGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDAMTTLNIFKL 173
Query: 313 L 313
+
Sbjct: 174 V 174
>gi|42784095|ref|NP_981342.1| sporulation inhibitor KapD [Bacillus cereus ATCC 10987]
gi|206976439|ref|ZP_03237346.1| sporulation inhibitor KapD [Bacillus cereus H3081.97]
gi|217962377|ref|YP_002340949.1| sporulation inhibitor KapD [Bacillus cereus AH187]
gi|222098364|ref|YP_002532422.1| sporulation inhibitor kapd [Bacillus cereus Q1]
gi|229141628|ref|ZP_04270159.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST26]
gi|229199060|ref|ZP_04325743.1| Sporulation inhibitor KapD [Bacillus cereus m1293]
gi|375286900|ref|YP_005107339.1| sporulation inhibitor KapD [Bacillus cereus NC7401]
gi|384182706|ref|YP_005568468.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402554974|ref|YP_006596245.1| sporulation inhibitor KapD [Bacillus cereus FRI-35]
gi|423355376|ref|ZP_17333000.1| hypothetical protein IAU_03449 [Bacillus cereus IS075]
gi|423375516|ref|ZP_17352853.1| hypothetical protein IC5_04569 [Bacillus cereus AND1407]
gi|423571803|ref|ZP_17548041.1| hypothetical protein II7_05017 [Bacillus cereus MSX-A12]
gi|423573411|ref|ZP_17549530.1| hypothetical protein II9_00632 [Bacillus cereus MSX-D12]
gi|423608739|ref|ZP_17584631.1| hypothetical protein IIK_05319 [Bacillus cereus VD102]
gi|42740026|gb|AAS43950.1| sporulation inhibitor KapD [Bacillus cereus ATCC 10987]
gi|206745363|gb|EDZ56763.1| sporulation inhibitor KapD [Bacillus cereus H3081.97]
gi|217065516|gb|ACJ79766.1| sporulation inhibitor KapD [Bacillus cereus AH187]
gi|221242423|gb|ACM15133.1| sporulation inhibitor KapD [Bacillus cereus Q1]
gi|228584331|gb|EEK42466.1| Sporulation inhibitor KapD [Bacillus cereus m1293]
gi|228641826|gb|EEK98126.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST26]
gi|324328790|gb|ADY24050.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358355427|dbj|BAL20599.1| sporulation inhibitor KapD [Bacillus cereus NC7401]
gi|401083839|gb|EJP92092.1| hypothetical protein IAU_03449 [Bacillus cereus IS075]
gi|401092202|gb|EJQ00336.1| hypothetical protein IC5_04569 [Bacillus cereus AND1407]
gi|401199398|gb|EJR06300.1| hypothetical protein II7_05017 [Bacillus cereus MSX-A12]
gi|401214958|gb|EJR21679.1| hypothetical protein II9_00632 [Bacillus cereus MSX-D12]
gi|401237374|gb|EJR43829.1| hypothetical protein IIK_05319 [Bacillus cereus VD102]
gi|401796184|gb|AFQ10043.1| sporulation inhibitor KapD [Bacillus cereus FRI-35]
Length = 207
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QQFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
CK GI+Q VD+G++ E + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFPELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCE- 113
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
K P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 114 KAGVDFPFQGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 311 ALL 313
L+
Sbjct: 174 KLV 176
>gi|268577621|ref|XP_002643793.1| Hypothetical protein CBG02004 [Caenorhabditis briggsae]
Length = 607
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDFCKD 195
++++F T D++ Y EII+F +++++ ++ + F +VRP N LSD+C +
Sbjct: 12 LLILNFATTRDENNYDYASEIIQFSVIVLNTKEKKIREDVKFDKFVRPIINPTLSDYCTN 71
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q VD WL+ + T +A V +S D + + + K
Sbjct: 72 HTGISQNTVDSAEPFPVVFEEFSAWLQENDFQETRYAFVVFSRRDLWFIAQYQFLLVKQP 131
Query: 256 KPPYFNRWINLKVPFHEVFGGVRCN------LKEAVEMAGLAWQGRAHCGLDD----AKN 305
P F +W+++ + G + +++ + + ++G AH +D+ AK
Sbjct: 132 LPAMFKQWVDMNATMKKAQQGQDYHRPEENIIQDMSNIYNIPYEGTAHNAMDNCHFLAKI 191
Query: 306 TARLL 310
T R+L
Sbjct: 192 TKRVL 196
>gi|395774320|ref|ZP_10454835.1| hypothetical protein Saci8_31315 [Streptomyces acidiscabies 84-104]
Length = 201
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 140 VIDFEATCDKDKNPYP---QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
VID EATC D P P E+IE +V V + + VRP +++ S FC +L
Sbjct: 10 VIDLEATC-WDGQPPPGSVSEVIEVGLTVVDVVARTRVSRHRILVRPVRSRV-SAFCTEL 67
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TG+ Q +V RGV+ +EA +E G +A +W +D R + + +
Sbjct: 68 TGLTQDEVARGVSFAEAC---RVLVEEYGGGERPWA--SWGEYD-RRQFARQSQADGVAY 121
Query: 257 P---PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P P N K F E +G R + +A+++AGL +GR H G DDA N A L+
Sbjct: 122 PFGYPTERTHTNAKAVFAEAYGLRRKPGMAQALQIAGLPLEGRHHRGEDDAWNIAALVLD 181
Query: 313 LMHRG 317
L+ RG
Sbjct: 182 LVGRG 186
>gi|361069199|gb|AEW08911.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143928|gb|AFG53450.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143930|gb|AFG53451.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143932|gb|AFG53452.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143934|gb|AFG53453.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143936|gb|AFG53454.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143940|gb|AFG53456.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143942|gb|AFG53457.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143944|gb|AFG53458.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143946|gb|AFG53459.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143948|gb|AFG53460.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143950|gb|AFG53461.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143952|gb|AFG53462.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143954|gb|AFG53463.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143956|gb|AFG53464.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143958|gb|AFG53465.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143960|gb|AFG53466.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLP 347
AGL W+GRAH GLDDAKNTARLL LM RG K +ITNS+++ + +GS P I P
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANGS----TLPLPIQEP 56
Query: 348 P 348
P
Sbjct: 57 P 57
>gi|229087422|ref|ZP_04219556.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-44]
gi|228695844|gb|EEL48695.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-44]
Length = 207
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V +E + +YVRP L++
Sbjct: 4 QQFIFLDFEFTMPQNRKKPKGFFP-EIIEVG--LVSVVNCVVEDTYASYVRPETFSCLTE 60
Query: 192 FCKDLTGIQQIQVDRGVT---LSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESE 248
CK GI+Q VD G++ L E L +++K + +VTW N D +V L+
Sbjct: 61 RCKKFLGIKQEAVDGGISFLELVEKLAQYEKRCQT--------TIVTWGNMDMKV-LKHN 111
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
C + P+ +L + + FG + L +A+E G G+ HC LDDA T
Sbjct: 112 CEAVGV-TFPFSGECRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTY 170
Query: 308 RLLALL 313
+ L+
Sbjct: 171 NIFKLV 176
>gi|336367654|gb|EGN95998.1| hypothetical protein SERLA73DRAFT_185475 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380368|gb|EGO21521.1| hypothetical protein SERLADRAFT_473977 [Serpula lacrymans var.
lacrymans S7.9]
Length = 380
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 38/226 (16%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVS----SVTGQLEAC-----FQTYVR 182
Q + F+V+D EATC + +P EIIE+P ++ S G+ F+++V+
Sbjct: 128 QPYDAFLVLDVEATCLQGAGFEWPNEIIEWPVCLMKWKDKSSKGKASQLVVVDEFRSFVK 187
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI---KN----TNFAVVT 235
PT LS FC +LTGI Q QV+ T + L ++L G+ KN F +
Sbjct: 188 PTWRPQLSQFCTELTGITQTQVNSAPTFPKVLKSFARFLSQNGLIDPKNGRPLLRFCWCS 247
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWI------------------NLKVPFHEVFGGV 277
+D R + +C KI P + + N + G
Sbjct: 248 DGPFDIRDFVVKQCFLSKIPMPVWLRGDVLDVRKVVSAWSASQTMQENYEAKTRSASGSR 307
Query: 278 RCNLKEAVEMAGL---AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+L +++ L A++GR H G+DD +N AR++ L R +
Sbjct: 308 LRSLNIPLQLRALGLSAFEGRQHSGIDDTRNIARIITELARRSIRL 353
>gi|138896523|ref|YP_001126976.1| sporulation inhibitor KapD [Geobacillus thermodenitrificans NG80-2]
gi|134268036|gb|ABO68231.1| Sporulation inhibitor KapD [Geobacillus thermodenitrificans NG80-2]
Length = 207
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ + F +YV+P L+D CK
Sbjct: 7 YLFLDFEFTMPETKTTPNGFSPEIIEVG--LVAVVDEQIVSQFSSYVKPLRFPQLTDRCK 64
Query: 195 DLTGIQQIQVDRGVTLSE--ALLR-HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
I Q Q+D G++ E +LLR +D+ VVTW N D +V+ E+ C+
Sbjct: 65 SFLNITQEQIDSGMSFYELVSLLRQYDRERPT--------TVVTWGNMDMKVLREN-CQS 115
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ + P+ +L + + FG + L++AV+ G G+AHC LDDA +
Sbjct: 116 ARV-EFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEGIGKAHCALDDAFTAYTIF 174
Query: 311 ALL 313
L+
Sbjct: 175 RLI 177
>gi|452973131|gb|EME72953.1| sporulation inhibitor KapD [Bacillus sonorensis L12]
Length = 205
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K +PQ EIIE + IV V ++ F +Y++P L+ C
Sbjct: 6 LLIIDFEFTMPEGKY-HPQNFFPEIIE--AGIVKVVDDEVAETFSSYIKPKKFPKLTRRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q +VD+G+T + DK E +N+ ++TW N D +V L+ C F
Sbjct: 63 KSFLNITQEKVDQGMTFHSFI---DKLKELDPDQNS--VIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P P+ +L + + E FG NL +A E G G+ H LDDA T +L
Sbjct: 117 V--PFPFKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDLGTGKQHKALDDAMTTYKLFQ 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|383143938|gb|AFG53455.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143962|gb|AFG53467.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLP 347
AGL W+GRAH GLDDAKNTARLL LM RG K +ITNS+++ + +GS P I P
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANGS----TLPLPIQDP 56
Query: 348 P 348
P
Sbjct: 57 P 57
>gi|298489770|ref|YP_003719947.1| exonuclease RNase T and DNA polymerase III ['Nostoc azollae' 0708]
gi|298231688|gb|ADI62824.1| Exonuclease RNase T and DNA polymerase III ['Nostoc azollae' 0708]
Length = 178
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 139 VVIDFEATCDKDKNPYPQEI--IEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+VI+ EATC Y E+ IE +VI++ T ++++ FQ +++P N +L+DF ++L
Sbjct: 1 MVINLEATCSDKHTFYRHEMETIEIGAVILNRQTWEIDSEFQQFIKPVRNPILTDFWRNL 60
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
T I Q QVD E + + +W+ + N N+D L+ C+F I
Sbjct: 61 TTISQKQVDTAPQFPEVMPKLAEWMSSF----PNDIFCPGGNYDKTQFLQY-CKFHNI-P 114
Query: 257 PPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
P+ N+K F E G + + +A++ G+ +G + G+D+A N A +
Sbjct: 115 YPFGPEHRNIKKQFSEYLGVYNKFGMAQALQHLGMELKGTHYRGIDNAHNIAVI 168
>gi|312883579|ref|ZP_07743304.1| hypothetical protein VIBC2010_12209 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368802|gb|EFP96329.1| hypothetical protein VIBC2010_12209 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 176
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + +G++ Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWNENGIGRTGEIIEIGLAEIDLTSGEIVKRAQYYVKPEADEV-SQFCTEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G +L E L + +N G N +A +W D V+L++EC K +
Sbjct: 65 TGISPRKIEKQGRSLGEVL---NSMKKNFGGSNKIYA--SWGRDD--VILQNECAKKGLE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL F R K A EM G+ W+GR H G DA N A+ LAL+
Sbjct: 118 MP--FREFINLATLFRIQNRLKDKRVGHKVAQEMKGITWEGRQHSGYVDAYNLAK-LALV 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|386333198|ref|YP_006029367.1| exonuclease [Ralstonia solanacearum Po82]
gi|334195646|gb|AEG68831.1| exonuclease [Ralstonia solanacearum Po82]
Length = 191
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+V+D EATCD + + E IE +V V+ L+ FQ + RP N L+ FC LT
Sbjct: 4 ILVVDLEATCDDNAPTFDMETIEVGAVWVAPDGAVLDR-FQAFSRPLINPRLTPFCSTLT 62
Query: 198 GIQQIQVDRGVT---LSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
I Q VD T ++EAL G +W WD + + R
Sbjct: 63 NIHQTDVDSAPTFPAVAEALRAFVARYRQPGAT-----WASWGAWDHKQLDRDSARHG-- 115
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
PP IN K F + G + +A E+ L +G H LDDA N ARLL
Sbjct: 116 ITPPIDLPHINAKRLFAKARRIGKEVGMAKACELVSLQLEGAHHRALDDALNVARLL 172
>gi|213409417|ref|XP_002175479.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
gi|212003526|gb|EEB09186.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
Length = 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 134 EFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ +Y +V+D EATC++ Y EIIEFP ++ ++ F TYV+P LS++
Sbjct: 61 KLRYLLVVDVEATCEEGCGFSYMNEIIEFPCLLYDLEQKRIIDEFHTYVKPRRIPTLSNY 120
Query: 193 CKDLTGIQQIQVDRGVT-------LSEALLRHDKWL----------ENKGIKNTNFAVVT 235
CK+LT I Q +D L E L +HD L E + T + +
Sbjct: 121 CKELTKIPQKLIDNAPPFKTVLDLLHEFLSKHDDKLIPPVNGPNTFEWSRLPKTAYHFRS 180
Query: 236 WSN--------WDCRVMLESECRFKKIWKPPYFNRWIN-----LKVPFHEVFGGVRCNLK 282
N WD + E + PP WIN ++ F + F + N+
Sbjct: 181 QKNWAWACDGPWDMASFVAKEFATTEENNPP---SWINGPFVDVRSLFSDAFRVSKSNIN 237
Query: 283 EAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
+ L ++G+ H GLDDA+N R++ + +F
Sbjct: 238 AMLSRWNLTFEGQEHNGLDDARNLVRVIQHMQQEDIEF 275
>gi|228982489|ref|ZP_04142748.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|410678565|ref|YP_006930936.1| exonuclease [Bacillus thuringiensis Bt407]
gi|228776672|gb|EEM24980.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|409177695|gb|AFV21999.1| exonuclease [Bacillus thuringiensis Bt407]
Length = 186
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%), Gaps = 12/193 (6%)
Query: 136 QYFVVIDFEATCDK---DKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++ ++ID E+TC K + + EIIE +V++ + T ++ +QT+V+P LS++
Sbjct: 2 KHLLIIDLESTCFKRGAEPRNFFSEIIEIGAVVLHTETFEIVEEYQTFVKPVLFPTLSEY 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C LT I+Q +VD G ++ +A + L NK + +W +D + + RF
Sbjct: 62 CLHLTTIRQDEVDYGKSIKDA-MNEIASLYNK----YDCVFASWGFYDKKQFKQVCERFG 116
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ + I+LK H + R ++ A++M L +G H G+DDA+N +++ +
Sbjct: 117 VNY--PFGHLHISLKHQ-HGTWTRQRPMGMERALKMHHLPLEGIHHRGIDDARNISKIAS 173
Query: 312 LLMHRGFKFSITN 324
++H G+ N
Sbjct: 174 HMIHSGWNHEFMN 186
>gi|373855960|ref|ZP_09598706.1| Exonuclease RNase T and DNA polymerase III [Bacillus sp. 1NLA3E]
gi|372455029|gb|EHP28494.1| Exonuclease RNase T and DNA polymerase III [Bacillus sp. 1NLA3E]
Length = 206
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEAT----CDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ IDFE T ++ K YP EIIE + IVS V +++ F +YV P +LS+ C
Sbjct: 7 YLFIDFEFTMPEKSERYKGFYP-EIIE--AGIVSVVDDKVQEQFSSYVTPIRFPILSERC 63
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QV++G+ + L+R L N + +++TW N D RV L + C
Sbjct: 64 KSFLRISQGQVEQGIPFQD-LIRKMNELNN----SYPSSIITWGNMDMRV-LRNNCHHAD 117
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ P+ + I+L + + FG + L +AV+ G G+ H LDDA T + L
Sbjct: 118 LMF-PFTGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHRALDDAMTTFNIFKL 176
Query: 313 L 313
+
Sbjct: 177 V 177
>gi|154687258|ref|YP_001422419.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens FZB42]
gi|375363574|ref|YP_005131613.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266676|ref|YP_005422383.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385266026|ref|ZP_10044113.1| sporulation inhibitor KapD [Bacillus sp. 5B6]
gi|387899738|ref|YP_006330034.1| sporulation inhibitor [Bacillus amyloliquefaciens Y2]
gi|421730468|ref|ZP_16169597.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451345723|ref|YP_007444354.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens IT-45]
gi|154353109|gb|ABS75188.1| KapD [Bacillus amyloliquefaciens FZB42]
gi|371569568|emb|CCF06418.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380500029|emb|CCG51067.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150522|gb|EIF14459.1| sporulation inhibitor KapD [Bacillus sp. 5B6]
gi|387173848|gb|AFJ63309.1| sporulation inhibitor [Bacillus amyloliquefaciens Y2]
gi|407076434|gb|EKE49418.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849481|gb|AGF26473.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens IT-45]
Length = 205
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVNDEVTETFSSYIKPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 63 KTFLNITQKDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA+ T +L
Sbjct: 117 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|328863733|gb|EGG12832.1| hypothetical protein MELLADRAFT_114944 [Melampsora larici-populina
98AG31]
Length = 321
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 44/222 (19%)
Query: 133 QEFQYFVVIDFEATCDKDK-----NP-----------YPQEIIEFPSVIVS--SVTGQLE 174
QEF F+ +D E+TC NP YP EIIE+P +++ +G+ E
Sbjct: 60 QEFHSFLCLDVESTCINSNQRHLDNPHNLNEYQLAWMYPNEIIEWPVILMQWRHCSGRWE 119
Query: 175 AC----FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALL--------RHDKW-L 221
++++V+PT +S+FC LTGI Q D TL L RH + +
Sbjct: 120 LYEVDRYRSFVKPTWRPEISEFCTQLTGITQQDTDNAPTLPAMLKDFQINFIERHQLFTV 179
Query: 222 ENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN---RWINLKVPFHEVFGGVR 278
N+ + T+ +W + L + K+ P Y I+++ V
Sbjct: 180 HNRSVWVTDGPWDLRDHWIKSIFLS---KLKRYQIPSYLQSPIHMIDMRYLLQAFIPKVY 236
Query: 279 C-------NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
C +L E++++ GL ++G+ H G+DDA N +RLL+ L
Sbjct: 237 CIRPPTSLSLNESLKIFGLEFEGQEHSGIDDAANLSRLLSKL 278
>gi|220929605|ref|YP_002506514.1| exonuclease RNase T and DNA polymerase III [Clostridium
cellulolyticum H10]
gi|219999933|gb|ACL76534.1| Exonuclease RNase T and DNA polymerase III [Clostridium
cellulolyticum H10]
Length = 186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ +DFEATC +K K P+ EIIE +V ++ F V+PT LLSD+C
Sbjct: 2 LIFVDFEATCWDKNEKYKQPHA-EIIEIGAVATGKDLKEI-GKFSAVVKPTIEPLLSDYC 59
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC----RVMLESEC 249
K+LTG+ Q V+ G+ + A+ +W+ +T + TW N+D R +
Sbjct: 60 KELTGLSQTDVENGIEFNRAIDLFYQWIIQYQDTDTPI-LYTWGNYDGFLLKRNLRRHRN 118
Query: 250 RFKKIWKPPYFNRWINLKVPFHEV--FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
+ K K NL+ F E C+L +A+++ G ++G H ++DA N
Sbjct: 119 KNKDFLKIIQKGGVANLQEKFLEFTKLPCSSCSLTKALQIIGEDYRGIKHRSINDAANMI 178
Query: 308 RLLALL 313
+L L
Sbjct: 179 KLYKYL 184
>gi|452856762|ref|YP_007498445.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452081022|emb|CCP22789.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 232
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P L+ C
Sbjct: 33 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVNDEVTETFSSYIKPKKFPKLTKRC 89
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 90 KTFLNITQKDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 143
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA+ T +L
Sbjct: 144 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFK 201
Query: 312 LL 313
L+
Sbjct: 202 LV 203
>gi|294501668|ref|YP_003565368.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium QM
B1551]
gi|294351605|gb|ADE71934.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium QM
B1551]
Length = 204
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ IDFE T + K +P+ EIIE V V + ++ F +YV+PT L++ C
Sbjct: 7 YLFIDFEFTMPEYKG-FPKGFFPEIIEVGLVFVKN--QEIIDRFSSYVQPTHFTKLTERC 63
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I+Q QV+ G+TL + + R + + ++TW N D +V+ +C K
Sbjct: 64 KSFLHIEQNQVNEGITLEQLVQRLGMYKHS--------TIITWGNMDMKVL--RQCCQKN 113
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P+ + I+L + + FG + L +AV+ G G+ HC LDDA T + L
Sbjct: 114 KVPFPFAGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDAMTTLNIFKL 173
Query: 313 L 313
+
Sbjct: 174 V 174
>gi|149183042|ref|ZP_01861496.1| sporulation inhibitor KapD [Bacillus sp. SG-1]
gi|148849272|gb|EDL63468.1| sporulation inhibitor KapD [Bacillus sp. SG-1]
Length = 214
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
V+IDFE + ++ +NP YP EIIE + +V+ G++ F TYV+P+ +L+ C
Sbjct: 15 LVIIDFEFSMPERQQNPRGFYP-EIIE--TGLVAVQNGKITDKFSTYVKPSAFPVLTKRC 71
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+ +L+++ + +G KN ++TW N D +V L + C K
Sbjct: 72 KQFLSISQSDVDNGIPF-HSLIQYLNEINRRG-KN---KIITWGNMDMKV-LRNNCN-KA 124
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P+ +I+L + + FG + L +AV+ G G+ H LDDA T + L
Sbjct: 125 GIDFPFTGEFIDLSMEYKRFFGDQNQTGLWKAVQEYGREGVGKHHKALDDALTTYHIFKL 184
Query: 313 L 313
+
Sbjct: 185 V 185
>gi|376261873|ref|YP_005148593.1| exonuclease [Clostridium sp. BNL1100]
gi|373945867|gb|AEY66788.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium sp. BNL1100]
Length = 187
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ +DFEATC +K K P+ EIIE +V ++ F +RP +LSD+C
Sbjct: 2 LIFVDFEATCWDKNEKYKRPHA-EIIEIGAVATGQNLKEI-GKFSAVIRPEIEPVLSDYC 59
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K+LTG+ Q V+ G+ + A+ +W+ + + TW N+D +L+ R +
Sbjct: 60 KELTGLSQSDVENGIDFNRAIDLFYQWIIQYQTTQSPI-LYTWGNYDT-FLLKRSLRRHR 117
Query: 254 IWKPPYFN-----RWINLKVPFHE--VFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
+ N I+L+ F + CNL +A+++ + G H +DDA N
Sbjct: 118 TKNKDFLNIIHKEGLIDLQEQFMKFTALPSSSCNLVKALQIIRKNYHGTIHRSVDDAANM 177
Query: 307 ARLLALL 313
+L L
Sbjct: 178 IKLYRYL 184
>gi|402312615|ref|ZP_10831539.1| exonuclease [Lachnospiraceae bacterium ICM7]
gi|400369073|gb|EJP22076.1| exonuclease [Lachnospiraceae bacterium ICM7]
Length = 220
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
E IE ++++ ++ + F+TYV+P N ++ +DLTGI V +EAL
Sbjct: 25 ETIEIGAIMLDENFQEI-SSFRTYVKPEYNTRITSIVRDLTGITYDMVINAPKFNEALKM 83
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK-----IWKPPYFNRWINLKVPFH 271
W G+ + + + WS+ D + + E R KK I + N W + + F
Sbjct: 84 FSNWC--LGVDD-DIKIYAWSDNDYK-QVSKELRLKKYDISTIESKIFSNEWNDFQEEFD 139
Query: 272 EVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
G + +L A++MAG+ + GR H LDDA+NTA+L + R
Sbjct: 140 TELGFDKQVSLSLALDMAGINFLGREHSALDDARNTAKLFHIFKDR 185
>gi|196250879|ref|ZP_03149564.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
G11MC16]
gi|196209608|gb|EDY04382.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
G11MC16]
Length = 207
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ F +YV+P L+D CK
Sbjct: 7 YLFLDFEFTMPETKTTPNGFSPEIIEVG--LVAVVDEQIVNQFSSYVKPLRFPQLTDRCK 64
Query: 195 DLTGIQQIQVDRGVTLSE--ALLR-HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
I Q Q+D G++ E +LLR +D+ VVTW N D +V+ E+ C+
Sbjct: 65 SFLNITQEQIDSGMSFYELVSLLRQYDRERPT--------TVVTWGNMDMKVLREN-CQS 115
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ + P+ +L + + FG + L++AV+ G G+AHC LDDA +
Sbjct: 116 ARV-EFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEGIGKAHCALDDAFTAYTIF 174
Query: 311 ALL 313
L+
Sbjct: 175 RLI 177
>gi|331002829|ref|ZP_08326343.1| hypothetical protein HMPREF0491_01205 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413318|gb|EGG92686.1| hypothetical protein HMPREF0491_01205 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 220
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 139 VVIDFEATCDKDKNPY---PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D E + K+ E IE ++++ ++ + F+TYV+P N +
Sbjct: 4 IVVDLEMNGIEKKHRIFGCTMETIEIGAIMLDENYQEI-SSFKTYVKPEYNSKIEKNISR 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI V +EAL + W + + + WS D + + E R K+
Sbjct: 63 LTGITNNMVVNAPKFNEALKKFSDWC---LAADDDIRIYAWSKNDYK-QIAKEIRLKRYD 118
Query: 256 KPP-----YFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
P Y N W + + F G R +LK A++MAG+ + GR H LDDA+NTA+L
Sbjct: 119 IRPEESMVYLNEWNDFQEEFDTELGFERQISLKLALDMAGIDFLGREHSALDDARNTAKL 178
Query: 310 LALLMHR 316
+ R
Sbjct: 179 FHIFRDR 185
>gi|394992550|ref|ZP_10385325.1| sporulation inhibitor KapD [Bacillus sp. 916]
gi|393806587|gb|EJD67931.1| sporulation inhibitor KapD [Bacillus sp. 916]
Length = 232
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P L+ C
Sbjct: 33 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVNDEVTETFSSYIKPKKFPKLTKRC 89
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 90 KTFLNITQKDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 143
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA+ T +L
Sbjct: 144 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFK 201
Query: 312 LL 313
L+
Sbjct: 202 LV 203
>gi|405120691|gb|AFR95461.1| hypothetical protein CNAG_02368 [Cryptococcus neoformans var.
grubii H99]
Length = 604
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 20/116 (17%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEII---EFPSVIV---------SSVTGQLEACFQT 179
Q ++ F+ D EATC K YP EII EFP V+V V ++++ F++
Sbjct: 179 QRYRSFLCFDVEATCRGGKEFDYPNEIIASTEFPVVLVRWGEPNEEGKRVLEKIDS-FRS 237
Query: 180 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE------NKGIKNT 229
YVRPT +L+DFCK LTGIQQ VD+ E L + ++WL+ +KG+K+
Sbjct: 238 YVRPTWRPVLTDFCKSLTGIQQETVDKSPIFPEVLKQLEEWLDKWDLRGDKGLKDA 293
>gi|428215737|ref|YP_007088881.1| exonuclease [Oscillatoria acuminata PCC 6304]
gi|428004118|gb|AFY84961.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Oscillatoria acuminata PCC 6304]
Length = 188
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 138 FVVIDFEATC-DKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D EATC +KD P +EIIE + +G+L V+P +Q+ S+FC
Sbjct: 8 IIVVDIEATCWEKDPPPNQEREIIEIGICPLEIASGELLEKESILVKPKQSQV-SEFCTQ 66
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT + QV++GV+L ++ L NK I + ++ +D R + EC KK
Sbjct: 67 LTTLTPAQVNQGVSLGQSC----SILRNKYISHQRIWA-SYGEFDKR-QFQVECE-KKGV 119
Query: 256 KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAG------LAWQGRAHCGLDDAKNTARL 309
+ P+ NR +N+K F ++ L++ V MAG L +G H G DDA N AR+
Sbjct: 120 RYPFSNRHLNVKTLFSVMYA-----LEKEVGMAGALEHLNLPLEGTHHRGHDDAWNIARI 174
Query: 310 LALLM 314
L+ L+
Sbjct: 175 LSQLI 179
>gi|398306161|ref|ZP_10509747.1| sporulation inhibitor KapD [Bacillus vallismortis DV1-F-3]
Length = 205
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K N +P EIIE + IV SV ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPEGKYSPQNFFP-EIIE--AGIVKSVDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N +VTW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIVTWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G A G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDAGTGTHHKALDDALTAHKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|342320538|gb|EGU12478.1| Double-strand siRNA ribonuclease [Rhodotorula glutinis ATCC 204091]
Length = 436
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 43/267 (16%)
Query: 133 QEFQYFVVIDFEATCDKDKNP-------YPQEIIEFPSVIV------------------- 166
Q F F+V D EATC++ + P YP EIIE+P +++
Sbjct: 96 QLFDSFLVFDVEATCEEIEGPWGKLAFAYPNEIIEWPVILLQWRKKRRRDERDLAPGEEV 155
Query: 167 -----SSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRH---D 218
A F ++V+PT + LS FC LTGI Q VD T S+ L R+ D
Sbjct: 156 EGEDEDDWELVQTAEFHSFVKPTWRRTLSAFCTALTGITQRDVDSAPTFSQ-LCRNFHRD 214
Query: 219 KWLENKGIKNTNFAV-VTWSNWDCRVMLESECRFKKIWKPPYF-NRWINLKVPFHEVFGG 276
L++ + N V VT WD R + C +PP+ I+L++ F G
Sbjct: 215 FILKHNLFTSENKTVWVTDGPWDLRDFVAKTCYLSGTPRPPWLAGEMIDLRLLVSSFFAG 274
Query: 277 VRCNLKEAVEMAGLAWQGRAHCGLDDA---KNTARLLALLMHRGFKFSITNSLMWQTN-- 331
++ + E+ + G +D+ + A L A L + I L +
Sbjct: 275 LKKDSTESSRLEGKLSDAFGALSVDEEDPQTDAADLKAALGAQPLPTPIAGPLSGSSAIH 334
Query: 332 -DGSLTWNQFPERIFLPPHQLHKQMDL 357
+ T + P +LP HQL L
Sbjct: 335 IPSASTSHDPPSPAYLPSHQLTAPSSL 361
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 268 VPFHEVFGGVRCNLKEAVEMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 324
+P H++ +L ++ L + GR H GL DA+N +R+L L HRG S+ N
Sbjct: 350 LPSHQLTAPSSLSLPSVLDSLTLPPFSGRLHSGLSDARNASRILIDLAHRGLATSVAN 407
>gi|291231281|ref|XP_002735595.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 217
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ-------EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 188
++++ D EATC K P Q EII+ +VI+ S T + + FQ+Y RP +
Sbjct: 5 EFYLCFDLEATCVDPKCPANQVTEGFQPEIIDIGAVILDSNTLEEKGEFQSYCRPVKHPT 64
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIK----NTNFAVVTWSNWDC-RV 243
L FC +LT I Q VD + R W+++KG+K NF +VT +DC +
Sbjct: 65 LQPFCLELTKISQETVDAADEFPDVWGRFIDWMKSKGLKPGAETPNFQLVTDGPFDCGKY 124
Query: 244 MLESECRFKKIWKPPYFNRWINLKV---PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGL 300
+ K+ P + ++ LK + + G L + + GL G H L
Sbjct: 125 LFIQFNNTSKLSFPHWARNFVELKTEYKSYKRLVGRRWPKLSDMLAGLGLLRSGSNHRAL 184
Query: 301 DDAKNTARLL-ALLMHRGFKF 320
DA + A + +L RG K+
Sbjct: 185 ADAHSVADVTKTVLRRRGDKY 205
>gi|398308084|ref|ZP_10511558.1| sporulation inhibitor KapD [Bacillus mojavensis RO-H-1]
Length = 205
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K N +P EIIE + IV SV G++ F +Y+RP L+ C
Sbjct: 6 LLIIDFEFTMPEGKYSPQNFFP-EIIE--AGIVKSVNGEVVETFSSYIRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLNITQNQVDEGMRFEDFIRKLNELDPEK-----NCTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|228993630|ref|ZP_04153537.1| Sporulation inhibitor KapD [Bacillus pseudomycoides DSM 12442]
gi|228999668|ref|ZP_04159244.1| Sporulation inhibitor KapD [Bacillus mycoides Rock3-17]
gi|229007227|ref|ZP_04164828.1| Sporulation inhibitor KapD [Bacillus mycoides Rock1-4]
gi|228753981|gb|EEM03418.1| Sporulation inhibitor KapD [Bacillus mycoides Rock1-4]
gi|228760030|gb|EEM09000.1| Sporulation inhibitor KapD [Bacillus mycoides Rock3-17]
gi|228766059|gb|EEM14706.1| Sporulation inhibitor KapD [Bacillus pseudomycoides DSM 12442]
Length = 207
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 136 QYFVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q F+ +DFE T K K +P EIIE +VS V +E + +YVRP L++
Sbjct: 4 QQFLFLDFEFTMPQNRKKPKGFFP-EIIEVG--LVSVVDCVVEDTYSSYVRPETFSCLTE 60
Query: 192 FCKDLTGIQQIQVDRGVT---LSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESE 248
CK GI Q VD G++ L E L++++K + +VTW N D +V L+
Sbjct: 61 RCKKFLGINQEAVDGGISFLELVEKLVQYEKRCQT--------TIVTWGNMDMKV-LKHN 111
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
C + P+ + +L + + FG + L +A+E G G+ HC LDDA T
Sbjct: 112 CEAIGA-EFPFSGQCRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAITTY 170
Query: 308 RLLALL 313
+ L+
Sbjct: 171 NIFKLV 176
>gi|392567404|gb|EIW60579.1| hypothetical protein TRAVEDRAFT_19224 [Trametes versicolor
FP-101664 SS1]
Length = 258
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 93/233 (39%), Gaps = 54/233 (23%)
Query: 133 QEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIV--------SSVTGQLEAC--FQTYV 181
Q + F+V+D EATC + YP EIIE+P ++ +LE F+++V
Sbjct: 8 QPYDAFLVLDVEATCVEGAGFDYPNEIIEWPVCLLRWKDRDTKGKAREELEVVDEFRSFV 67
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTNFAVV 234
RPT LSDFC LTGI Q QVD E L +H + G + F
Sbjct: 68 RPTWRPQLSDFCTTLTGITQEQVDHAPPFPEVLEHFRGFLAKHQLIDDATGRRLARFCFC 127
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYF-----------------------NRWINLKVPFH 271
+ +D R + PP + +R + P
Sbjct: 128 SDGPYDVRDF---------VIAPPAWLTSDVVDVRRVVGEWHASATAGADRSAERRPPQS 178
Query: 272 EVFG---GVRCNLKEAVEMAGL-AWQGRAHCGLDDAKNTARLLALLMHRGFKF 320
F V ++ + GL ++GR H G+DD +N ARL+ L RG+K
Sbjct: 179 GAFPLPRRVTLSIPRQLHALGLEPFEGRPHSGIDDTRNIARLVVELARRGWKL 231
>gi|308174838|ref|YP_003921543.1| exoribonuclease (3'-5') [Bacillus amyloliquefaciens DSM 7]
gi|307607702|emb|CBI44073.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens DSM 7]
Length = 232
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P + L+ C
Sbjct: 33 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVDDEVAETFSSYIKPKKFRKLTKRC 89
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 90 KTFLNITQEDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 143
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA T +L
Sbjct: 144 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDAMTTHKLFK 201
Query: 312 LL 313
L+
Sbjct: 202 LV 203
>gi|291458895|ref|ZP_06598285.1| exonuclease family protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418149|gb|EFE91868.1| exonuclease family protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 234
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 155 PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEAL 214
P EII+ +V++ +E YV P + ++ F +LTGIQ+ QV L EAL
Sbjct: 37 PMEIIQIGAVLLDESFRNMEE-ISLYVHPE-HGVIDRFIANLTGIQRRQVKESKKLREAL 94
Query: 215 LRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN-----RWINLKVP 269
L ++ + KG + + TWS D L E K+I + RW++ +
Sbjct: 95 LELEQRVSEKG----EYKIYTWSGSDYS-QLRRELDLKEISEEAIERFMEQERWVDYQKI 149
Query: 270 FHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
F E + G + +L+EA+ + G+ G+AH GLDD+ NT ++ L
Sbjct: 150 FGERYRLGRKVSLEEALSLCGITPDGKAHNGLDDSINTGYIIEKL 194
>gi|332707583|ref|ZP_08427616.1| putative exonuclease [Moorea producens 3L]
gi|332353646|gb|EGJ33153.1| putative exonuclease [Moorea producens 3L]
Length = 186
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
++ +V+D EATC + K P QE IIE ++ V+G+ V+P +++ S
Sbjct: 3 KKLDQILVVDVEATCWQGKPPPGQENEIIEIGICVLDVVSGKPLEKDSILVKPERSRV-S 61
Query: 191 DFCKDLTGIQQIQVDRGVTLSEAL-LRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+FC LT + Q QVD+G++ EA + DK+L + + ++ ++D R + +C
Sbjct: 62 EFCTKLTTLTQEQVDQGISFVEACSMLQDKYLSARRV------WASYGDYD-RNQFQKQC 114
Query: 250 RFKKIWKPPYFNRWINLKVPF-------HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDD 302
+ + P+ R IN+K F HEV + +A+++ L +G H G DD
Sbjct: 115 T-SRFLRYPFGTRHINIKTLFAISQALPHEV------GMAQALDLLNLPLEGTHHRGGDD 167
Query: 303 AKNTARLLALLM 314
A N AR+ + L+
Sbjct: 168 AWNIARIFSRLL 179
>gi|118356253|ref|XP_001011385.1| exonuclease family protein [Tetrahymena thermophila]
gi|89293152|gb|EAR91140.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 475
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ Y ID+E C++ + EIIEFP +V ++ F +YV+P C+++ +
Sbjct: 249 DYDYLFFIDYE--CNQ--SYLGSEIIEFPIQVVDVKQLKIIDTFSSYVQP-CSKI-TKLI 302
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF---AVVTWSNWDCRVMLESECR 250
+LT I +V + + L + +LE K +KN NF AVV + D ++E +
Sbjct: 303 TNLTKIDDNKVQNAPKIQQVLQQVRIFLE-KYLKN-NFDRCAVVYDNKSDFLFIVEESIK 360
Query: 251 FKKIWKPPYFNRWINLKVPF----HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
K P + ++I+L F + R +LK ++ G+ +QG+ HCG DD KN
Sbjct: 361 -KNFLLPAFLQQYIDLGTCFPIRNEQNINEQRISLKGMLDTLGMKFQGQKHCGADDCKNQ 419
Query: 307 ARLLALLMHRGFKFS 321
A + L+ RG+ F+
Sbjct: 420 ALVAIELLKRGYSFT 434
>gi|196018082|ref|XP_002118730.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
gi|190578360|gb|EDV18784.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
Length = 87
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 137 YFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
Y+ VIDFEATC+ + NP Y EIIEFP+++V++ T +E+ F Y RP N LS FC
Sbjct: 20 YYCVIDFEATCE-EVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRPVMNPKLSSFCT 78
Query: 195 DLTGIQQIQ 203
LTGI Q++
Sbjct: 79 KLTGIDQVR 87
>gi|300775119|ref|ZP_07084981.1| exonuclease [Chryseobacterium gleum ATCC 35910]
gi|300505859|gb|EFK36995.1| exonuclease [Chryseobacterium gleum ATCC 35910]
Length = 183
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 138 FVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++D EATC +++ P QE IIE I+++ TG++ ++P +++ S FC +
Sbjct: 7 ILIVDLEATCWENRPPRGQESEIIEIGVCIMNAKTGKISKSEGILIKPQHSKV-SPFCTE 65
Query: 196 LTGIQQIQVD-RGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
LT I Q +D G+ L +A +LR + + ++ N+D ++ RF
Sbjct: 66 LTTITQSMLDHEGIMLDDAFDILRAE-------YDSEELTWASYGNYDLNMLQNQARRFY 118
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR--CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + IN+K F E+ +R ++ A+ G +G H G+DDA+N A++L
Sbjct: 119 TDY--PMSDDHINVKTLFGEIHPTIRKSVGMQRALGELGFTLEGTHHRGVDDARNIAKIL 176
>gi|90578520|ref|ZP_01234331.1| hypothetical protein VAS14_15754 [Photobacterium angustum S14]
gi|90441606|gb|EAS66786.1| hypothetical protein VAS14_15754 [Photobacterium angustum S14]
Length = 186
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + + EIIE + TG++ Q YVRP +++ S FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ V++ G LS L K +E K G ++ +A W + D +L+ EC
Sbjct: 62 TELTGIKPEVVEKNGKPLSVIL----KSIEQKFGGRHKIYA--AWGHDD--RILKKECLA 113
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K++ P F ++NL F R + A+E+AG+ W+GR H G DA N ARL
Sbjct: 114 KELKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARL 171
Query: 310 LALL 313
A +
Sbjct: 172 AATM 175
>gi|89071984|ref|ZP_01158580.1| hypothetical protein SKA34_08118 [Photobacterium sp. SKA34]
gi|89052085|gb|EAR57536.1| hypothetical protein SKA34_08118 [Photobacterium sp. SKA34]
Length = 186
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + + EIIE + TG++ Q YVRP +++ S FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ V++ G LS L K +E K G ++ +A W + D +L+ EC
Sbjct: 62 TELTGIKPEVVEKNGKPLSVIL----KSIEQKFGGRHKIYA--AWGHDD--RILKKECLA 113
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K++ P F ++NL F R + A+E+AG+ W+GR H G DA N ARL
Sbjct: 114 KELKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARL 171
Query: 310 LALL 313
A +
Sbjct: 172 AATM 175
>gi|429506417|ref|YP_007187601.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488007|gb|AFZ91931.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 232
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P L+ C
Sbjct: 33 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVNDEVTETFSSYIKPKKFPKLTKRC 89
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 90 KTFLNITQKDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 143
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA T +L
Sbjct: 144 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDALTTYKLFK 201
Query: 312 LL 313
L+
Sbjct: 202 LV 203
>gi|386759730|ref|YP_006232947.1| sporulation inhibitor KapD [Bacillus sp. JS]
gi|384933013|gb|AFI29691.1| sporulation inhibitor KapD [Bacillus sp. JS]
Length = 205
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ E L+R L+ + N ++TW N D +V L+ C F
Sbjct: 63 KTFLKITQKQVDEGIRF-EDLIRKLNELDPE----KNSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|384160705|ref|YP_005542778.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens TA208]
gi|384165595|ref|YP_005546974.1| exoribonuclease (3'-5') [Bacillus amyloliquefaciens LL3]
gi|384169786|ref|YP_005551164.1| sporulation inhibitor [Bacillus amyloliquefaciens XH7]
gi|328554793|gb|AEB25285.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens TA208]
gi|328913150|gb|AEB64746.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens LL3]
gi|341829065|gb|AEK90316.1| sporulation inhibitor [Bacillus amyloliquefaciens XH7]
Length = 232
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV +V ++ F +Y++P L+ C
Sbjct: 33 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKTVDDEVAETFSSYIKPKKFPKLTKRC 89
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+T +E + + ++ +K N +VTW N D +V L+ C F
Sbjct: 90 KTFLNITQEDVDGGITFNEFIRKLNELDPDK-----NCTIVTWGNMDMKV-LKQNCMFNH 143
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA T +L
Sbjct: 144 I--PFPFKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDAMTTHKLFK 201
Query: 312 LL 313
L+
Sbjct: 202 LV 203
>gi|56461520|ref|YP_156801.1| EXOIII family exonuclease [Idiomarina loihiensis L2TR]
gi|56180530|gb|AAV83252.1| EXOIII family exonuclease [Idiomarina loihiensis L2TR]
Length = 192
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 136 QYFVVIDFEATC--------DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
+ ++++D EATC D+ + EIIEF VI G + VRP +
Sbjct: 10 RLYLIVDLEATCWDGNVEGLDRKQTVDDMEIIEFGCVIAED-NGTVRDYRSFMVRPQSHP 68
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES 247
LS+FC LT I Q VD + D+WL+N ++ +W N+D + + +
Sbjct: 69 NLSEFCTQLTSIAQSDVDAAPVYQSVVPEIDQWLKNYKLEGWG----SWGNYD-KNQISA 123
Query: 248 ECRFKKIWKPPYFN-RWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
E R + P +F+ +N+K + R +L A++ GL+++G H G+DDA N
Sbjct: 124 EQRRHNL-APEFFSLSHMNIKQEWRRGKVNSRSADLANAMKYHGLSFEGTHHRGIDDALN 182
Query: 306 TARLL 310
A LL
Sbjct: 183 IAPLL 187
>gi|410454188|ref|ZP_11308130.1| sporulation inhibitor KapD [Bacillus bataviensis LMG 21833]
gi|409932499|gb|EKN69460.1| sporulation inhibitor KapD [Bacillus bataviensis LMG 21833]
Length = 207
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ IDFE T + + EIIE IV+ V Q+ F +YV P LS+ CK
Sbjct: 7 YLFIDFEFTMPERNVRMKDFFAEIIEVG--IVAVVDDQITEQFSSYVTPLKFPNLSERCK 64
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
I Q QVD+G+++ E + K L ++N +VTW N D +V L C +
Sbjct: 65 SFLHISQQQVDKGLSIFELI----KKLAEFNMENVETTIVTWGNMDMKV-LRHNCLMAGV 119
Query: 255 WKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P+ ++L + + FG + L +AV+ G GR H LDDA T + L+
Sbjct: 120 -DFPFHGAELDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGRHHRALDDAMTTYNIFKLV 178
>gi|409046206|gb|EKM55686.1| hypothetical protein PHACADRAFT_256486 [Phanerochaete carnosa
HHB-10118-sp]
Length = 342
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 94/230 (40%), Gaps = 37/230 (16%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIV----SSVTGQ---LEAC--FQTYV 181
Q + F+V+D EATC D N Y EIIE+P ++ S GQ LE F+++V
Sbjct: 87 QAYDAFLVVDVEATCMPGTDFN-YANEIIEWPVCLLRWKYKSENGQASRLEVVDEFRSFV 145
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLS--------EALLRHDKWLENKGIKNTNFAV 233
RP LS FC LTGI Q V+ S E ++R+ G F
Sbjct: 146 RPMWRPQLSSFCTQLTGITQENVNAAPPFSTMVHSAFREFMVRNGLIDAYSGEPLVRFCW 205
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYFNR-----------WINLKVPFHEVFGGVRCN-- 280
+ WD R + +C ++ P + R W P G N
Sbjct: 206 CSDGPWDLRDFVVKQCFISRMAVPTWLARDFIDVRRIVAQWQQRNDPNKPRQQGPTPNCA 265
Query: 281 ---LKEAVEMAGLA-WQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
+ + + GL +QGR HCG DD +N AR++ L +G S+
Sbjct: 266 YLPMVRQLHLLGLGPFQGRQHCGQDDTRNVARIITELARQGMPLKPNTSI 315
>gi|261420373|ref|YP_003254055.1| sporulation inhibitor KapD [Geobacillus sp. Y412MC61]
gi|319768041|ref|YP_004133542.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC52]
gi|261376830|gb|ACX79573.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC61]
gi|317112907|gb|ADU95399.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC52]
Length = 206
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ F +YV+P L++ CK
Sbjct: 6 YLFLDFEFTMPETKTNPNGFCPEIIEVG--LVAVVDDQIIGQFSSYVKPLRFPQLTERCK 63
Query: 195 DLTGIQQIQVDRGVTLSE--ALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
I Q Q+DRG++ E +LLR ++ V+TW + D +V+ E+ C+
Sbjct: 64 SFLNITQEQIDRGMSFYELVSLLRQYD-------RDRPTTVMTWGSMDMKVLREN-CQSA 115
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDA 303
++ + P+ +L + + FG + L++AV+ G G+AHC LDDA
Sbjct: 116 RV-EFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDA 166
>gi|146302457|ref|YP_001197048.1| exonuclease [Flavobacterium johnsoniae UW101]
gi|146156875|gb|ABQ07729.1| Exonuclease, RNase T and DNA polymerase III [Flavobacterium
johnsoniae UW101]
Length = 181
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P Q EIIE ++ S TG++ ++P +S FC +
Sbjct: 7 IIIIDLEATCWQGVVPKGQQNEIIEIGLAVLDSQTGEITKNKGILIKPQ-RSTVSPFCTE 65
Query: 196 LTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW---DCRVMLESECRF 251
LT I Q +D+ GV+ EA+ N I N + TW+++ D ML +C+
Sbjct: 66 LTTITQDLLDKNGVSFEEAV--------NLLIDEYNPDLYTWASYGQYDLN-MLTKQCKS 116
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P IN+K F E FG R + A+++ + +G H G+DDAKN A+++
Sbjct: 117 FGI-PYPMGEEHINVKEHFAEKFGLKRSTGMNGALQLLNIPLEGTHHRGIDDAKNIAKIM 175
>gi|152977204|ref|YP_001376721.1| sporulation inhibitor KapD [Bacillus cytotoxicus NVH 391-98]
gi|152025956|gb|ABS23726.1| Exonuclease RNase T and DNA polymerase III [Bacillus cytotoxicus
NVH 391-98]
Length = 207
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F+ +DFE T K K +P EIIE +VS + +E + +YVRP L++ C
Sbjct: 6 FLFLDFEFTMPQNRKKPKGFFP-EIIEVG--LVSVIGCTMEDTYSSYVRPESFPDLTNRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
KD GI Q VD G++ L DK ++ + + +VTW N D +V L+ C
Sbjct: 63 KDFLGIDQEAVDGGISF---LALVDKLVQYE--ERYKPTIVTWGNMDMKV-LKHNCEVAG 116
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
+ P+ +L + + FG + L +A+E G G+ HC LDDA T + L
Sbjct: 117 V-PFPFSGVCRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 313 L 313
+
Sbjct: 176 V 176
>gi|153875688|ref|ZP_02003377.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067847|gb|EDN66622.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 187
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 25/189 (13%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIV-SSVTGQLEACFQTYVRPTCNQLLSDF 192
+ +VID EATC +DK P Q EIIE I+ ++ T + ++P +S+F
Sbjct: 5 EQILVIDIEATCWEDKIPKGQKNEIIEIGICILDTTFTYDRLSSESIIIKPQSE--VSEF 62
Query: 193 CKDLTGIQQIQVDRGVTLSEAL-LRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
C LT + Q VD+G++L E + K+ + A ++ +D R E ECR
Sbjct: 63 CTQLTTLTQADVDKGISLKEGCDILQTKYFSKQ------HAWASYGAYD-RKQFERECRT 115
Query: 252 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAG------LAWQGRAHCGLDDAKN 305
K I + P+ + IN+K E NLK+ V M G +G H G+DDA N
Sbjct: 116 KGI-EYPFHQKHINVKQWIMETL-----NLKKRVGMVGALNILDFPLEGTHHRGVDDAWN 169
Query: 306 TARLLALLM 314
A++LA L+
Sbjct: 170 IAKILAWLL 178
>gi|330447523|ref|ZP_08311171.1| exonuclease family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491714|dbj|GAA05668.1| exonuclease family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 185
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C + + EIIE + TG++ Q YVRP +++ S FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 194 KDLTGIQ-QIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESECRF 251
+LTGI+ +I G LS L K +E K G ++ +A W + D +L+ EC
Sbjct: 62 TELTGIKPEIVEKNGKPLSVIL----KSIEQKFGGRHKIYA--AWGHDD--RILKKECLA 113
Query: 252 KKIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K + P F ++NL F R + A+E+AG+ W+GR H G DA N ARL
Sbjct: 114 KDLKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARL 171
Query: 310 LALL 313
A +
Sbjct: 172 AATM 175
>gi|357394314|ref|YP_004909155.1| hypothetical protein KSE_74440 [Kitasatospora setae KM-6054]
gi|311900791|dbj|BAJ33199.1| hypothetical protein KSE_74440 [Kitasatospora setae KM-6054]
Length = 192
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
V+D EATC + + P Q EIIE +V + + VRP + + S FC +LT
Sbjct: 12 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLASLARVGRHRVLVRPRRSSV-SGFCTELT 70
Query: 198 GIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
G+ +V G+ EA LL + + +W ++D R+ +CR
Sbjct: 71 GLTAREVAGGLPFDEACRLLAAEH-------RAGERPWASWGDYD-RLQFTRQCRAAGT- 121
Query: 256 KPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
P+ R N K F E G R + A+E+AGL +GR H G DDA N A L+ L
Sbjct: 122 AYPFGRRHTNAKAVFTEARGLPKRPGMARALELAGLPLEGRHHSGADDAWNIAALVLTLA 181
Query: 315 HRG 317
G
Sbjct: 182 RSG 184
>gi|384176743|ref|YP_005558128.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595967|gb|AEP92154.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 205
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ E L+R L+ + N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRF-EDLIRKLNELDPE----KNSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|296330790|ref|ZP_06873266.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675737|ref|YP_003867409.1| exoribonuclease (3'-5') [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296152104|gb|EFG92977.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413981|gb|ADM39100.1| putative exoribonuclease (3'-5') [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 205
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K N +P EIIE + IV SV ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPEGKYSPQNFFP-EIIE--AGIVKSVDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|449095591|ref|YP_007428082.1| sporulation inhibitor [Bacillus subtilis XF-1]
gi|449029506|gb|AGE64745.1| sporulation inhibitor [Bacillus subtilis XF-1]
Length = 205
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ E L+R L+ + N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRF-EDLIRKLNELDPE----KNSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|145514788|ref|XP_001443299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410677|emb|CAK75902.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 124 PAHPYDFQPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVR 182
P ++ Q F ++ D + +C +D + Y QEIIE + + ++ FQ Y++
Sbjct: 231 PIPEEQYRLQGFTNLILFDIQVSCIEDNRQNYNQEIIEISAKVYDIDQRKIVRNFQKYIK 290
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCR 242
P N ++S+FC TGI+Q Q++ G++L +A+ + + G F ++T ++D
Sbjct: 291 PVDNPIISEFCTKQTGIKQFQINNGISLQQAINQLTDIFKELG----RFCIITKGDFDL- 345
Query: 243 VMLESECRFKKIWKPPYFNRWINLKVPF 270
++L+ E + K I F +IN+K F
Sbjct: 346 LILKKEAQRKNIKLVRNFTYYINIKKVF 373
>gi|397171384|ref|ZP_10494792.1| EXOIII family exonuclease [Alishewanella aestuarii B11]
gi|396087023|gb|EJI84625.1| EXOIII family exonuclease [Alishewanella aestuarii B11]
Length = 185
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 136 QYFVVIDFEATC--------DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
++ +++D EATC ++ + E+IEF +V+ G+L VRP
Sbjct: 3 KHLLIVDLEATCWDGDVPSLNRRQTVEDMEVIEF-GCVVAEPDGKLLDAKSFIVRPVLRP 61
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES 247
LS FC LTGI Q QV +E + D WL F +W ++D R L +
Sbjct: 62 QLSSFCTQLTGISQQQVAVAPVYAEVVKVIDAWLA----AYQPFCWASWGDYD-RHQLGA 116
Query: 248 ECRFKKIWKPPYFN-RWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
E R +P + NLK + E R L+ A+ LA++G+ H G+DDA+N
Sbjct: 117 E-RQHNGCEPAFMALEHKNLKQLWREGRAAKRRSGLQAALAFHNLAFEGQHHRGIDDARN 175
Query: 306 TARLL 310
ARLL
Sbjct: 176 MARLL 180
>gi|297528923|ref|YP_003670198.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp. C56-T3]
gi|297252175|gb|ADI25621.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp. C56-T3]
Length = 206
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ F +YV+P L++ CK
Sbjct: 6 YLFLDFEFTMPETKTNPNGFCPEIIEVG--LVAVVDDQIIGQFSSYVKPLRFPQLTERCK 63
Query: 195 DLTGIQQIQVDRGVTLSE--ALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
I Q Q+DRG++ E +LLR ++ V+TW + D +V+ E+ C+
Sbjct: 64 SFLNITQEQIDRGMSFYELVSLLRQYD-------RDRPTTVMTWGSMDMKVLREN-CQSA 115
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDA 303
++ + P+ +L + + FG + L++AV+ G G+AHC LDDA
Sbjct: 116 QV-EFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDA 166
>gi|431793973|ref|YP_007220878.1| exonuclease [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784199|gb|AGA69482.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 209
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 138 FVVIDFEATCDKD---KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
F+V+DFE + + + EIIE ++++ + + +V+P L+D
Sbjct: 3 FLVVDFEFSVPRSYGKPRAWFSEIIEVGAIVLDQNGKLGDKTYSAFVKPQFWPRLADESY 62
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
+TGI+Q VDRGV+L EA+ L+ + ++ +V W + D R +L S C +
Sbjct: 63 GITGIRQEDVDRGVSLEEAI----SHLQELAPQRDSY-LVAWGDAD-RKVLGSVCEKYGL 116
Query: 255 WKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P ++ +++L + R +LK A+E G+ G H LDDA N A+++ +
Sbjct: 117 AYPFIWDNYVDLAEEYKAYRSLDRLLSLKRAIEENGIEQIGILHSALDDAINAAQVMGRM 176
Query: 314 MHRGFKFSI 322
M G+ I
Sbjct: 177 MSEGWSAQI 185
>gi|361069201|gb|AEW08912.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGS 334
AGL W+GRAH GLDDAKNTARLL LM RG K +ITNS+++ + + S
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANVS 47
>gi|321312691|ref|YP_004204978.1| sporulation inhibitor KapD [Bacillus subtilis BSn5]
gi|428280638|ref|YP_005562373.1| sporulation inhibitor KapD [Bacillus subtilis subsp. natto BEST195]
gi|430757751|ref|YP_007208348.1| hypothetical protein A7A1_2259 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|291485595|dbj|BAI86670.1| sporulation inhibitor KapD [Bacillus subtilis subsp. natto BEST195]
gi|320018965|gb|ADV93951.1| sporulation inhibitor KapD [Bacillus subtilis BSn5]
gi|430022271|gb|AGA22877.1| Hypothetical protein YugB [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 205
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|120553141|ref|YP_957492.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120322990|gb|ABM17305.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 227
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 138 FVVIDFEATC-DKDKNPYPQ-------EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
++ID EATC + + P + EIIE +++ G+L VRPT + +L
Sbjct: 32 LLIIDLEATCWEHRQAPNGEAQSNDNMEIIEI-GCALATRQGRLLDTRSFLVRPTRHPVL 90
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
S+FC LT I Q VD A+ + WL G +F +W N+D R+ LE++
Sbjct: 91 SEFCTGLTSITQEMVDEAPAFPGAIQAMNAWL---GDLPDDFIWCSWGNYD-RLHLEAQS 146
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCN-LKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ +NLK + G R N A+ LA++G H G+DDA+N R
Sbjct: 147 QEHDARPAVLAFPHLNLKRIWRRTTGQKRKNGFAHALAFHDLAFEGHHHRGVDDARNMVR 206
Query: 309 LL 310
+L
Sbjct: 207 VL 208
>gi|16080199|ref|NP_391025.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
168]
gi|221311089|ref|ZP_03592936.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
168]
gi|221315416|ref|ZP_03597221.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221320332|ref|ZP_03601626.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324616|ref|ZP_03605910.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SMY]
gi|402777305|ref|YP_006631249.1| exoribonuclease (3'-5') [Bacillus subtilis QB928]
gi|418031651|ref|ZP_12670136.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|452912438|ref|ZP_21961066.1| exonuclease family protein [Bacillus subtilis MB73/2]
gi|81637456|sp|O05231.1|KAPD_BACSU RecName: Full=Probable 3'-5' exonuclease KapD
gi|1934782|emb|CAB07913.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2635643|emb|CAB15136.1| putative exoribonuclease (3'-5') [Bacillus subtilis subsp. subtilis
str. 168]
gi|351472710|gb|EHA32823.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402482484|gb|AFQ58993.1| Putative exoribonuclease (3'-5') [Bacillus subtilis QB928]
gi|407961976|dbj|BAM55216.1| sporulation inhibitor KapD [Bacillus subtilis BEST7613]
gi|407965990|dbj|BAM59229.1| sporulation inhibitor KapD [Bacillus subtilis BEST7003]
gi|452117466|gb|EME07860.1| exonuclease family protein [Bacillus subtilis MB73/2]
Length = 205
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|56421469|ref|YP_148787.1| sporulation inhibitor KapD [Geobacillus kaustophilus HTA426]
gi|375010055|ref|YP_004983688.1| 3'-5' exonuclease kapD [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56381311|dbj|BAD77219.1| inhibition of the KinA pathway to sporulation [Geobacillus
kaustophilus HTA426]
gi|359288904|gb|AEV20588.1| 3'-5' exonuclease kapD [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 206
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 17/172 (9%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ F +YV+P L++ CK
Sbjct: 6 YLFLDFEFTMPETKTNPNGFCPEIIEVG--LVAVVDDQIIGQFSSYVKPLRFPQLTERCK 63
Query: 195 DLTGIQQIQVDRGVTLSE--ALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
I Q Q+DRG++ E +LLR + V+TW + D +V+ E+ C+
Sbjct: 64 SFLNITQEQIDRGMSFYELVSLLRQYD-------RERPTTVMTWGSMDMKVLREN-CQSA 115
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDA 303
++ + P+ +L + + FG + L++AV+ G G+AHC LDDA
Sbjct: 116 QV-EFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDA 166
>gi|390597111|gb|EIN06511.1| hypothetical protein PUNSTDRAFT_53952 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 77
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLS 190
+ +Y ++DFEATCD + QEIIEFP+++ T ++ EA F YVRP L+
Sbjct: 6 HKLEYLFILDFEATCDDKEPKITQEIIEFPTLVYDLNTNRVLDEATFHEYVRPVVKPQLT 65
Query: 191 DFCKDLTGIQQI 202
+FC LTGI Q+
Sbjct: 66 EFCVSLTGITQV 77
>gi|94311778|ref|YP_584988.1| 3'-5' Exonuclease [Cupriavidus metallidurans CH34]
gi|93355630|gb|ABF09719.1| 3'-5' Exonuclease [Cupriavidus metallidurans CH34]
Length = 194
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 139 VVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+V+D EATC +D + E E +V V G + FQ++VRP N L+ F +LT
Sbjct: 6 LVVDLEATCSEDMAAGWEMETAEIGAVWVRG-NGTVLDHFQSFVRPVVNPQLTAFFTNLT 64
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
GI Q VD + A + +++E + + + V+W WD R +L R+ +I +P
Sbjct: 65 GISQSDVDDAPLFTVAAEQLRQFVERYQMPGSIW--VSWGAWDARQLLRDSARY-RIAEP 121
Query: 258 PYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
++ G + +A ++AG G H LDDA + LL
Sbjct: 122 IALPHQNGKRLFAKAQKIGKEVGMAKACQLAGQTIAGTHHRALDDAMSIVGLL 174
>gi|443634351|ref|ZP_21118526.1| sporulation inhibitor KapD [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443346027|gb|ELS60089.1| sporulation inhibitor KapD [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 205
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV SV ++ F +Y+RP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSVDDEVVETFSSYIRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|197302182|ref|ZP_03167241.1| hypothetical protein RUMLAC_00908 [Ruminococcus lactaris ATCC
29176]
gi|197298613|gb|EDY33154.1| exonuclease [Ruminococcus lactaris ATCC 29176]
Length = 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 31/193 (16%)
Query: 138 FVVIDFEATCD-----KDKN-PYPQEIIEFPSVIVSS-VTGQLEACFQTYVRPTCNQLLS 190
++VID E C ++KN Y EII+ +V++ + E C YV P + ++
Sbjct: 15 YLVIDLE-MCKVPKDYRNKNYKYASEIIQIGAVLLDERYRRRDEICL--YVHPE-HGVID 70
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
+F ++TGI+ Q+ L E LL +W I + + V WSN D L E R
Sbjct: 71 NFIANMTGIKNRQIKNAPKLRERLLELTEW-----IGDREYQVFAWSNSDFS-QLSHEVR 124
Query: 251 FKKIW--KPPYF---NRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGL 300
KK+ K F RWI+ + EVFG +L+EA+ + L GR H GL
Sbjct: 125 SKKLQDEKIQSFMAPERWID----YQEVFGKKYSFEKAVSLQEALMLCDLTQDGRMHDGL 180
Query: 301 DDAKNTARLLALL 313
DDA NTA+L+ L
Sbjct: 181 DDALNTAKLIRKL 193
>gi|320335855|ref|YP_004172566.1| Exonuclease RNase T and DNA polymerase III [Deinococcus
maricopensis DSM 21211]
gi|319757144|gb|ADV68901.1| Exonuclease RNase T and DNA polymerase III [Deinococcus
maricopensis DSM 21211]
Length = 183
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 140 VIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
VID EATC P Q EIIE +V T + + VRP +++ S FC DLT
Sbjct: 7 VIDVEATCWDGPTPPGQTNEIIEVGICVVDLRTLERVDRRRVMVRPGRSEI-SAFCTDLT 65
Query: 198 GIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
GI V GVT +EA +LR + +++ +W ++D R E +C
Sbjct: 66 GITARDVADGVTFTEACAILRRELHADSR-------PWASWGDYD-RKQFERQCVATGT- 116
Query: 256 KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH 315
P+ R N K + R + EA++ AGL +GR H G DDA N A L+ L+
Sbjct: 117 PYPFSARHTNAKAQYALAHTLRRMGMAEALQHAGLPLEGRHHRGEDDAWNIAALILGLLR 176
Query: 316 RG 317
G
Sbjct: 177 GG 178
>gi|89100275|ref|ZP_01173141.1| sporulation inhibitor KapD [Bacillus sp. NRRL B-14911]
gi|89085013|gb|EAR64148.1| sporulation inhibitor KapD [Bacillus sp. NRRL B-14911]
Length = 206
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 139 VVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+ IDFE T +K K P EIIE +V S + G + F ++V P LS+ CK
Sbjct: 8 LFIDFEFTMPERNEKFKGFSP-EIIEAGAV--SVLNGAILEQFSSFVAPIHFPELSERCK 64
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
I Q QVD+G++ ++ + R LE G N + +VTW N D +V+ ++ +
Sbjct: 65 SFLHISQEQVDKGISFADLICR----LEQMGGNNAD-EIVTWGNMDMKVLRQNCSQAGTA 119
Query: 255 WKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ P+ + ++L + + FG + L +AV+ G GR H LDDA T ++ L+
Sbjct: 120 F--PFKGKEVDLSMEYKRFFGDQNQTGLWKAVKEYGKEGTGRHHRALDDALTTYKIYQLV 177
>gi|395804241|ref|ZP_10483482.1| exonuclease [Flavobacterium sp. F52]
gi|395433885|gb|EJF99837.1| exonuclease [Flavobacterium sp. F52]
Length = 181
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 20/181 (11%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P Q EIIE ++ + TG++ ++P + + S FC +
Sbjct: 7 IIIIDLEATCWQGVVPRGQQNEIIEIGLAVLDTETGEISKNKGILIKPQRSHV-SPFCTE 65
Query: 196 LTGIQQIQVDR-GVTLSEAL-LRHDKWLENKGIKNTNFAVVTWSNW---DCRVMLESECR 250
LT I Q +D+ GV+ EA+ L D++ N + TW+++ D ML +C+
Sbjct: 66 LTTITQDLLDKNGVSFEEAVDLLIDEY---------NPDLYTWASYGQYDLN-MLTKQCK 115
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P IN+K F E FG R + A+++ + +G H G+DDAKN A++
Sbjct: 116 SFGI-PYPMGEEHINVKEHFAEKFGLKRSTGMNGALQLLNIPLEGTHHRGIDDAKNIAKI 174
Query: 310 L 310
L
Sbjct: 175 L 175
>gi|403235758|ref|ZP_10914344.1| sporulation inhibitor KapD [Bacillus sp. 10403023]
Length = 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK-NP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++ IDFE T + K NP YP EIIE +VS ++ + ++V+P L++ C
Sbjct: 7 YLFIDFEFTMPEGKGNPQGFYP-EIIEVG--LVSVKNQKIIEKYSSFVQPIKFPTLTERC 63
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+T +E + + + EN ++ +VTW N D +V+ + +K
Sbjct: 64 KSFLNISQEQVDSGITFNELISKLSGY-ENL----SSSTIVTWGNMDMKVLRHNS---QK 115
Query: 254 IWKP-PYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
P P+ + +L + + FG + L +AV+ G G+ HC LDDA T +
Sbjct: 116 AGLPFPFKGKQRDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDALTTFNIFK 175
Query: 312 LL 313
L+
Sbjct: 176 LV 177
>gi|228472478|ref|ZP_04057240.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
gi|228276163|gb|EEK14910.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
Length = 184
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P + EIIE ++ ++TG++ V+PT +++ S FC
Sbjct: 5 IIIIDLEATCWEGIPPKGEVSEIIEIGICLLDTLTGEVSDNRGILVKPTHSKI-SPFCTQ 63
Query: 196 LTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT + V R GV+ EAL + K + + ++ N+D R ML+ +C +K+
Sbjct: 64 LTTLTPELVAREGVSFEEAL-----QILKKEYQAYQYTWASYGNYD-RNMLQKQCALRKL 117
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P N IN+K F EV R + +A+ + G H G DDA N A+++ L
Sbjct: 118 -PYPMRNEHINVKERFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIMYKL 176
Query: 314 M 314
+
Sbjct: 177 I 177
>gi|213962982|ref|ZP_03391241.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
gi|213954323|gb|EEB65646.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
Length = 183
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P + EIIE ++ ++TG++ ++PT +++ S FC
Sbjct: 5 IIIIDLEATCWEGIPPKGEVSEIIEIGICLLDTLTGEISDNRGILIKPTHSKI-SPFCTQ 63
Query: 196 LTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT + V R GV+ EA + K + + ++ N+D R ML+ +C +K+
Sbjct: 64 LTTLTPELVAREGVSFEEAF-----QILKKEYQAYQYTWASYGNYD-RNMLQKQCALRKL 117
Query: 255 WKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P N IN+K F EV R + +A+ + G H G DDA N A+++ L
Sbjct: 118 -PYPMRNEHINVKELFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIMHCL 176
Query: 314 MH 315
H
Sbjct: 177 SH 178
>gi|442610054|ref|ZP_21024779.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441748273|emb|CCQ10841.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 151
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTW 236
F T+++P + L+DFC +LT I Q VD EA+ KWL N N+ +W
Sbjct: 6 FNTFIQPQRHPKLTDFCTNLTTITQHDVDHAPYYPEAINTFQKWLGNYD----NYLFCSW 61
Query: 237 SNWDCRVMLESECRFKKIWKP---PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAW 292
+D + E +C F + P P+ +N+K F ++ R + A+++A +
Sbjct: 62 GEYD-KQQFEQDCAFHNVPYPIPAPH----LNIKKEFSKIQKVRKRQGMAGALKLAKIPH 116
Query: 293 QGRAHCGLDDAKNTARLLALLMHRGF 318
G H G+DDA N +L+ +M R F
Sbjct: 117 TGSHHRGIDDANNMIKLMPYVMGRVF 142
>gi|350267338|ref|YP_004878645.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349600225|gb|AEP88013.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 205
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K N +P EIIE + IV SV ++ F +Y++P L+ C
Sbjct: 6 LLIIDFEFTMPEGKYSPQNFFP-EIIE--AGIVKSVDDEVVETFSSYIKPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G G H LDDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|2920819|gb|AAC04618.1| similar to C. elegans hypothetical protein; similar to AF038615
(PID:g2736329), partial [Homo sapiens]
Length = 89
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIEFP + ++ T ++E+ F YV+P + L+ FC +LTGI Q VD +L + L R
Sbjct: 1 EIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLER 60
Query: 217 HDKWLENKGIKNTNF--AVVTWSNWDCRV 243
D+W+ +G+ + N VT +WD +V
Sbjct: 61 VDEWMAKEGLLDPNVKSIFVTCGDWDLKV 89
>gi|310830415|ref|YP_003965516.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
gi|309249882|gb|ADO59448.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
Length = 193
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 39/199 (19%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
++++D EATC ++ EIIE +V + + FQ +V+P LS+FC LT
Sbjct: 3 YIIVDLEATCWENDRSKRNEIIEIGAVKLDDHLNVVSE-FQAFVKPKLYPQLSEFCMQLT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I+Q VD T L W+ +N+ + +W +D + L+S+C K +P
Sbjct: 62 SIEQHDVDHAATFETVLEDFQSWM------GSNYWLCSWGYYD-KKQLKSDCDLHK--QP 112
Query: 258 PYFNRWINLKVPFHEVFGGVRCNLKEAVEMAG-----------------------LAWQG 294
W+ + G + LKE +E AG + +G
Sbjct: 113 ---TSWLRNHISIKHQHGAI---LKEKLENAGASKSEVKRVEHGVGMEKALKILKIPLEG 166
Query: 295 RAHCGLDDAKNTARLLALL 313
H G+DDA+N A++ +
Sbjct: 167 THHRGIDDARNIAKIFVAI 185
>gi|332878806|ref|ZP_08446521.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683157|gb|EGJ56039.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 183
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P + EIIE ++ ++TG++ V+PT +++ S FC
Sbjct: 5 IIIIDLEATCWEGIPPKGEVSEIIEIGICLLDTLTGEISDNRGILVKPTHSKI-SPFCTQ 63
Query: 196 LTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I V R GV+ +AL + + + + ++ N+D + ML+ +C +K+
Sbjct: 64 LTTITPELVAREGVSFEKAL-----QILKREYQAYQYTWASYGNYD-KNMLQKQCALRKL 117
Query: 255 WKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P N IN+K F EV R + +A+ + G H G DDA N A+++ L
Sbjct: 118 -PYPMRNEHINVKELFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIMHCL 176
Query: 314 MHRGFKFSITN 324
H + +TN
Sbjct: 177 SH----YQLTN 183
>gi|14581470|gb|AAK38347.1| prion interactor PINT1 [Mus musculus]
Length = 125
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 189 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF--AVVTWSNWDCRVMLE 246
L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N VT +WD +VML
Sbjct: 4 LTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLP 63
Query: 247 SECRFKKIWKPPYFNRWINLK 267
+C + + YF +WINLK
Sbjct: 64 GQCHYLGLPVADYFKQWINLK 84
>gi|448239201|ref|YP_007403259.1| putative 3'-5' exonuclease [Geobacillus sp. GHH01]
gi|445208043|gb|AGE23508.1| putative 3'-5' exonuclease [Geobacillus sp. GHH01]
Length = 206
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K N + EIIE +V+ V Q+ F +YV+P L++ CK
Sbjct: 6 YLFLDFEFTMPETKTNPNGFCPEIIEVG--LVAVVDDQIIGQFSSYVKPLRFPQLTERCK 63
Query: 195 DLTGIQQIQVDRGVTLSE--ALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
I Q Q+DRG++ E +LLR + V+TW + D +V+ E+ C+
Sbjct: 64 SFLNITQEQIDRGMSFYELVSLLRQYD-------RERPTTVMTWGSMDMKVLREN-CQSA 115
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDA 303
+ + P+ +L + + FG + L++AV+ G G+AHC LDDA
Sbjct: 116 Q-EEFPFTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDA 166
>gi|403416188|emb|CCM02888.1| predicted protein [Fibroporia radiculosa]
Length = 416
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 133 QEFQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIV-------SSVTGQLE--ACFQTYV 181
Q + F+V+D E TC + + YP EIIE+P ++ + +L A F+++V
Sbjct: 177 QPYDAFLVLDVEGTCVEGSSSFDYPNEIIEWPVCLLRWKDKSPDGIAKELVVVAEFRSFV 236
Query: 182 RPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKG----IKNTNFAVVTWS 237
RPT LLS FC +LTGI Q QVD +E L + +LE+ G + W
Sbjct: 237 RPTWRPLLSQFCTNLTGITQDQVDSAPEFTELLQMFETFLEDNGLIEPVTGRRLVRYCWC 296
Query: 238 N---WDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQG 294
+ +D R + +C K+ P WI V +V G VR + ++ +G
Sbjct: 297 SDGPFDVRDFVVKQCFISKVRMP----AWITGDV--LDVRGAVRTHTDRGDDIK----RG 346
Query: 295 RAH 297
+ H
Sbjct: 347 KGH 349
>gi|158339338|ref|YP_001520515.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158309579|gb|ABW31196.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 159
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 26/175 (14%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ Y++++D EATC + P+ + E IE +VI+ SV ++ F +++P + L+DF
Sbjct: 8 YDYYLIVDLEATCCNTFSIPHKETETIEIGAVIIESVGLEIIDEFTVFIKPIRHPNLTDF 67
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C +LT I+Q ++ T +A+ +W E + N +W ++D + LE E ++
Sbjct: 68 CTELTTIKQTDLEDAPTFPQAVGTFKRWFE----QYENSVFCSWGDYD-KNQLERESKYH 122
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
KI P GG NLK+ LA + + H G+ A T
Sbjct: 123 KIPYP----------------MGGEHFNLKKQF---SLALRTKKHYGMARALKTV 158
>gi|399031628|ref|ZP_10731531.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
gi|398070046|gb|EJL61365.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
Length = 181
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC + P QE IIE ++ TG++ ++P + + S FC +
Sbjct: 7 IIIIDLEATCWQGMVPKGQENEIIEIGLAVLDVETGEITKNQGILIKPQRSSI-SPFCTE 65
Query: 196 LTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q +D GV+ EA+ + + + TW+++ + + + K
Sbjct: 66 LTTITQDLLDENGVSFEEAI--------EQLVDEYQPDLYTWASYGQYDLNMLKKQSKSF 117
Query: 255 WKP-PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P P + IN+KV F E FG ++ + A+ + + +G H G+DDAKN A++L
Sbjct: 118 GIPYPMGDEHINVKVTFAEKFGLLKSTGMNGALHLLDIPLEGTHHRGIDDAKNIAKILNW 177
Query: 313 LMH 315
+H
Sbjct: 178 CLH 180
>gi|419719052|ref|ZP_14246344.1| exonuclease [Lachnoanaerobaculum saburreum F0468]
gi|383304803|gb|EIC96196.1| exonuclease [Lachnoanaerobaculum saburreum F0468]
Length = 220
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 139 VVIDFEATCDKDKNPY---PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D E + K E IE ++++ ++ + F+TYV+P N +
Sbjct: 4 IVVDLEMNSVEKKYKNLDCTMETIEIGAIMLDENYQEI-SSFRTYVKPEYNNRIRPLISR 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI V EAL W G+ + + + WS D + +L+ E KK +
Sbjct: 63 LTGITYDMVMNAPKFDEALKMFSNWC--LGVSD-DIKIYAWSENDYKQILK-EISLKK-Y 117
Query: 256 KPP------YFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
K Y W + + F G + +LK A++MAG+ + GR H LDDA+NTA+
Sbjct: 118 KSSLDEERVYLTEWHDFQAEFDTKLGFEKQLSLKTALDMAGVDFLGREHSALDDARNTAK 177
Query: 309 LLALLMHR 316
L + R
Sbjct: 178 LFNIFNDR 185
>gi|373468497|ref|ZP_09559748.1| exonuclease [Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371766152|gb|EHO54421.1| exonuclease [Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 220
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 139 VVIDFEATCDKDKNPY---PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D E +K E IE ++++ ++ + F+TYV+P N +
Sbjct: 4 IVVDLEMNSISNKYKDFDCTMETIEIGAIMLDENYKEI-SSFRTYVKPEYNNRIRPLISR 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI V EA+ W G+ N + + WS D + + E KK
Sbjct: 63 LTGITYDMVINAPKFDEAMKMFSNWC--LGV-NDDIKIYAWSENDYK-QISKEISLKKYE 118
Query: 256 -----KPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ Y W + + F + G + +LK A++MAG+ + GR H LDDA+NTA+L
Sbjct: 119 LSLDEERVYLTEWHDFQAEFDKELGFEKQLSLKMALDMAGVDFLGREHSALDDARNTAKL 178
Query: 310 LALLMHR 316
+ R
Sbjct: 179 FNIFNDR 185
>gi|449547644|gb|EMD38612.1| hypothetical protein CERSUDRAFT_123180 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 64/271 (23%)
Query: 117 APYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIV---SSVTGQL 173
+P++ L A + + F+V+D E+TC E+P ++ S +G
Sbjct: 21 SPHDSLVKAAEVN---SRYDAFLVLDVESTC-----------FEWPVCLMCWKKSDSGTP 66
Query: 174 EAC------FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR-HDKWLENKGI 226
E F+++V+PT LS FC + TG+ Q VD T E + HD ++ + G+
Sbjct: 67 ECVLEVVDTFRSFVKPTWKPTLSQFCVNFTGVTQTDVDNAPTFPEMIKTFHDDFMVHNGL 126
Query: 227 KNTN----FAVVTW---SNWDCRVMLESECRFKKIWKPPYF-NRWINLK--VPFH----- 271
+ N TW ++D + L +C +I P + ++N+K V H
Sbjct: 127 LDPNDDSRKVEYTWCCDGHFDIQDFLLKQCFISQIEVPNWMRGDFMNVKELVKGHCTSVA 186
Query: 272 ----EVFGGVRC--------------NLKEAVEMAGLA-WQGRAHCGLDDAKNTARLLAL 312
+ G R N+++ +E+ GL + GR HCG+DD +N AR+LA
Sbjct: 187 KQAPRITKGRRTITMMRIPIPLPYPFNIEKQLEVLGLGKFDGRKHCGIDDTRNLARILAE 246
Query: 313 LMHRG------FKFSITNSLMWQTNDGSLTW 337
L G F+++ + W DG + +
Sbjct: 247 LARLGIVLKPNLPFNLSKTWDWMGADGRVDY 277
>gi|315650719|ref|ZP_07903774.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
gi|315487023|gb|EFU77350.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
Length = 220
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 139 VVIDFEATCDKDKNPY---PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D E + K E IE ++++ ++ + F+TYV+P N +
Sbjct: 4 IVVDLEMNSVEKKYKNLDCTMETIEIGAIMLDENYQEI-SSFRTYVKPEYNNRIRPLISR 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI V EAL W G+ + + + WS D + +L+ E KK +
Sbjct: 63 LTGITYDMVMNAPKFDEALKMFSNWC--LGVSD-DIKIYAWSENDYKQILK-EISLKK-Y 117
Query: 256 KPP------YFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
K Y W + + F G + +LK A++MAG+ + GR H LDDA+NTA+
Sbjct: 118 KSSLDEERVYLTEWHDFQAEFDTKLGFEKQLSLKTALDMAGVDFLGREHSALDDARNTAK 177
Query: 309 LLALLMHR 316
L + R
Sbjct: 178 LFNIFNDR 185
>gi|421860162|ref|ZP_16292320.1| inhibitor of the KinA pathway to sporulation [Paenibacillus
popilliae ATCC 14706]
gi|410830366|dbj|GAC42757.1| inhibitor of the KinA pathway to sporulation [Paenibacillus
popilliae ATCC 14706]
Length = 222
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEACFQTYVRPTCNQLLSDFCKDL 196
++ D E T + K + EIIE +V V+ G+ + FQ +V+PT + LS +
Sbjct: 4 IIYDLEMTVKRKKGEFA-EIIEIGAVKVAEQDGKAAIADTFQAFVKPTLSPKLSQDTVNF 62
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI+Q V+ L + L + W++ + ++A+ +W D + ECR K+I
Sbjct: 63 TGIRQEDVNGSPVLQDVLDQFVAWIDTE-----DYALCSWGP-DDKAQFLKECRMKRI-- 114
Query: 257 PPYFNR-WINLKVPFHEVFGGV---RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAL 312
P ++ R NL+ P ++ + LK A++ + + G H LDDA NTA +
Sbjct: 115 PLHWLRNHNNLQKPVSKIMNRSSHQQVGLKTALDTLQVPFVGTQHRALDDAYNTALIYIH 174
Query: 313 LMHR 316
++ R
Sbjct: 175 MIDR 178
>gi|27365643|ref|NP_761171.1| hypothetical protein VV1_2322 [Vibrio vulnificus CMCP6]
gi|37680205|ref|NP_934814.1| hypothetical protein VV2021 [Vibrio vulnificus YJ016]
gi|320156044|ref|YP_004188423.1| hypothetical protein VVMO6_01198 [Vibrio vulnificus MO6-24/O]
gi|27361791|gb|AAO10698.1| hypothetical protein VV1_2322 [Vibrio vulnificus CMCP6]
gi|37198952|dbj|BAC94785.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931356|gb|ADV86220.1| hypothetical protein VVMO6_01198 [Vibrio vulnificus MO6-24/O]
Length = 176
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++D EIIE + + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNEDGVGRTGEIIEIGLAEIDLLKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L+E + ++N G N +A +W D R++++ EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLAEVI---KSMIKNFGGSNKIYA--SWGR-DDRILMQ-ECQEKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P FN +IN+ + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FNEFINIATLYRIQHRLKDKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|2231221|gb|AAB61982.1| KapD [Bacillus subtilis subsp. subtilis str. 168]
Length = 205
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T K N +P EIIE + IV S+ ++ F +YVRP L+ C
Sbjct: 6 LLIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q QVD G+ + + + ++ K N ++TW N D +V L+ C F
Sbjct: 63 KSFLKITQKQVDEGMRFEDFIRKLNELDPEK-----NSTIITWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P P+ +L + + FG L +A E G + G H DDA +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKAHDDALTAYKLFK 174
Query: 312 LL 313
L+
Sbjct: 175 LV 176
>gi|163753221|ref|ZP_02160345.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
gi|161326953|gb|EDP98278.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
Length = 182
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++D EATC + P Q EIIE ++++ T ++ ++P +++ S+FC +
Sbjct: 7 IIIVDLEATCWNEPIPNGQVNEIIEIGICVLNTETSEITQNEGILIKPERSEI-SEFCTE 65
Query: 196 LTGIQQIQVD-RGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q +D G++ EA + K + ++ +D ML+ +C+ + +
Sbjct: 66 LTTITQELIDTEGISFVEACTKLRVEYNPK-----QYTWASYGQYDLN-MLKRQCKLRNV 119
Query: 255 WKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P IN+K F EV G + + A+ + + +G H G+DDAKN A++L
Sbjct: 120 -EYPMGQEHINVKTTFTEVKGLRKKVGMNGALNILKIPLEGTHHRGVDDAKNIAKIL 175
>gi|323492478|ref|ZP_08097626.1| hypothetical protein VIBR0546_15616 [Vibrio brasiliensis LMG 20546]
gi|323313265|gb|EGA66381.1| hypothetical protein VIBR0546_15616 [Vibrio brasiliensis LMG 20546]
Length = 176
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + V+G++ Q YV+P +++ S FC L
Sbjct: 6 VVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVSGEIVKRAQYYVKPEHDEV-SLFCSQL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L+E + ++N G N +A W D RV+ E EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLAEVI---KSMVKNFGGANKIYA--AWGR-DDRVLRE-ECQAKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P FN +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 MP--FNEFINLATLYRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|392393927|ref|YP_006430529.1| exonuclease [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525005|gb|AFM00736.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 211
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSD 191
F+V+DFE + K + +P EIIE ++++ G+L + F +V+P L++
Sbjct: 3 FLVVDFEFSVPRSYGKPRAWFP-EIIEVGAIVLDP-NGKLLVDKTFNAFVKPRFWPRLAE 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
+TGI+Q VD+G+ L EA+ RH + K + + +V W + D R +L S C
Sbjct: 61 ESYGITGIRQEDVDQGIPLEEAI-RHLQ----KLVLHQETTIVAWGDAD-RKILGSVCEK 114
Query: 252 KKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P ++ +I+L + H +LK A+E + G H LDDA N A+++
Sbjct: 115 YGLKYPFIWDNYIDLAEQYKHYRSLDHLISLKRAIEENAIEQIGILHSALDDAINAAQVM 174
Query: 311 ALLMHRG 317
A +M G
Sbjct: 175 AKIMSEG 181
>gi|194376910|dbj|BAG63016.1| unnamed protein product [Homo sapiens]
Length = 136
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 230 NFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EM 287
++++ +WD L +C+ ++ PP+ +WIN++ + + R K + E
Sbjct: 11 KYSLLPDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEK 70
Query: 288 AGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 326
G+ + GR HCGLDD+KN AR+ ++ G + I +
Sbjct: 71 LGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKM 109
>gi|319650362|ref|ZP_08004505.1| sporulation inhibitor KapD [Bacillus sp. 2_A_57_CT2]
gi|317397923|gb|EFV78618.1| sporulation inhibitor KapD [Bacillus sp. 2_A_57_CT2]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
+E QY + IDFE T + + + EIIE + IVS + Q+ F +YV P L
Sbjct: 3 EEHQY-LFIDFEFTMPEKGSAFRGFFPEIIE--AGIVSVIGNQVCEEFSSYVTPVRFPKL 59
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
S+ CK I Q QVD+G+ E + K ++ +N +VTW N D +V L + C
Sbjct: 60 SERCKSFLHITQEQVDQGIDFLELV---KKMIDMN--RNRPCTIVTWGNMDMKV-LRNNC 113
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P+ R ++L + + FG + L +AV+ G G+ H LDDA T
Sbjct: 114 THAGV-DFPFRGREVDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHRALDDALTTYN 172
Query: 309 LLALL 313
+ L+
Sbjct: 173 IFRLV 177
>gi|343501087|ref|ZP_08738969.1| hypothetical protein VITU9109_23160 [Vibrio tubiashii ATCC 19109]
gi|418478872|ref|ZP_13047965.1| hypothetical protein VT1337_10692 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342818964|gb|EGU53813.1| hypothetical protein VITU9109_23160 [Vibrio tubiashii ATCC 19109]
gi|384573422|gb|EIF03916.1| hypothetical protein VT1337_10692 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 176
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + V G++ Q YV+P +++ S FC L
Sbjct: 6 VVCFDLEMCCWNEGGVGTTGEIIEVGLAEIDLVKGEIVKRAQYYVKPETDEV-SLFCSQL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L ++N G N +A W D ++L+ EC K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMVKNFGGTNKIYA--AWGRDD--LVLKQECLDKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P FN +INL F R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FNEFINLATLFRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|261253256|ref|ZP_05945829.1| hypothetical protein VIA_003281 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954741|ref|ZP_12597772.1| hypothetical protein VIOR3934_04644 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260936647|gb|EEX92636.1| hypothetical protein VIA_003281 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342814712|gb|EGU49647.1| hypothetical protein VIOR3934_04644 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 176
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + V G++ Q YV+P +++ S FC L
Sbjct: 6 VVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVNGEIVKRAQYYVKPEHDEV-SLFCSQL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI +V++ G L E L ++N G N +A W D R++++ EC+ K I
Sbjct: 65 TGITPRKVEKQGRPLEEVL---KSMVKNFGGANKIYA--AWGR-DDRILIK-ECQDKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P FN +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 MP--FNEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|312109679|ref|YP_003987995.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y4.1MC1]
gi|336234097|ref|YP_004586713.1| Exonuclease RNase T and DNA polymerase III [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718794|ref|ZP_17692976.1| exonuclease family protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214780|gb|ADP73384.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y4.1MC1]
gi|335360952|gb|AEH46632.1| Exonuclease RNase T and DNA polymerase III [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368396|gb|EID45669.1| exonuclease family protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 207
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++ +DFE T + K + EIIE V+V V ++ F +YV+PT +L++ CK
Sbjct: 7 YLFLDFEFTMPETKMEPKGFFPEIIEVGLVVV--VNDEICDQFSSYVKPTRFPVLTNRCK 64
Query: 195 DLTGIQQIQVDRGVTLSE--ALL-RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
I Q Q+++G++ E ALL ++D+ + VVTW + D +V+ E+ C+
Sbjct: 65 SFLNITQEQINQGMSFHELVALLCKYDRSCPS--------TVVTWGSMDMKVLKEN-CKA 115
Query: 252 KKIWKP-PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ P P+ +L + + FG L++A++ G G+AHC LDDA T +
Sbjct: 116 ANL--PFPFTGEHRDLAMEYKLFFGNKNHTGLRKAIQEYGNEGVGKAHCALDDAFTTYNI 173
Query: 310 LALL 313
L+
Sbjct: 174 FRLV 177
>gi|194015759|ref|ZP_03054375.1| exonuclease [Bacillus pumilus ATCC 7061]
gi|194013163|gb|EDW22729.1| exonuclease [Bacillus pumilus ATCC 7061]
Length = 205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 139 VVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+V+DFE T D +PQ EIIE + +V + + + F +YV+P L+ CK
Sbjct: 7 LVVDFEFTM-PDGKYHPQNFFPEIIE--AGVVKAASETIIDTFSSYVKPKKFPKLTKRCK 63
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
GI Q V+ G++ EA + +K + G ++ ++TW N D +V L+ C I
Sbjct: 64 SFLGITQQDVESGISF-EAFI--EKLVSLDGGEDCE--IITWGNMDMKV-LKQNCMLNHI 117
Query: 255 WKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P+ + +L + FG L++A + G G+ H LDDA T +LL L
Sbjct: 118 -AFPFKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQLLTLF 176
>gi|313218688|emb|CBY43136.1| unnamed protein product [Oikopleura dioica]
Length = 181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ-------------------------------EIIEFPS 163
F + +VIDFEA+C P+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDCENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 164 VIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN 223
V+V+ T ++ + F +V P + LSDFCK LT +++ + + TL E ++ + W ++
Sbjct: 63 VLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 224 KGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLK 267
K + T +WD L SE + KKI P W++L+
Sbjct: 123 VQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLR 165
>gi|163800755|ref|ZP_02194655.1| hypothetical protein 1103602000593_AND4_00793 [Vibrio sp. AND4]
gi|159175104|gb|EDP59901.1| hypothetical protein AND4_00793 [Vibrio sp. AND4]
Length = 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGRTGEIIEVGLAELDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L L+N G +N +A +W D V+L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--VILLEECQQKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIVWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|383755405|ref|YP_005434308.1| putative exonuclease [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381367457|dbj|BAL84285.1| putative exonuclease [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 138 FVVIDFEAT-CDKD----KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+VVID E D++ K +E+IEF +V + Q EA FQ YV P ++
Sbjct: 3 YVVIDLEMNPVDREFRDVKRHMKEEVIEFGAVRLDE-NFQQEAEFQCYVEPEYGKIKKHI 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI+Q V +EA R +W+ + K + +WS D + L+ ECRF
Sbjct: 62 V-ELTGIKQEMVAGQGHYAEAFARFVEWIGEEETK-----IYSWSMSDIK-QLKKECRF- 113
Query: 253 KIWKPPYFN------RWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
K P F+ RW++L+ F G LK A+ ++G H L DA N
Sbjct: 114 ---KLPDFDVKWLDARWVDLQQEFDNRLGLHNSLALKHALGAMDHKFEGTQHTALADAVN 170
Query: 306 TARLLALL 313
T+ +L L+
Sbjct: 171 TSAILVLM 178
>gi|444427542|ref|ZP_21222919.1| hypothetical protein B878_16325 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239190|gb|ELU50764.1| hypothetical protein B878_16325 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI +V++ G L E L L+N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKVEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKSID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|343510247|ref|ZP_08747499.1| hypothetical protein VIS19158_00435 [Vibrio scophthalmi LMG 19158]
gi|343516501|ref|ZP_08753536.1| hypothetical protein VIBRN418_18333 [Vibrio sp. N418]
gi|342796086|gb|EGU31781.1| hypothetical protein VIBRN418_18333 [Vibrio sp. N418]
gi|342802960|gb|EGU38346.1| hypothetical protein VIS19158_00435 [Vibrio scophthalmi LMG 19158]
Length = 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C + D EIIE + V G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNIDGVGTTGEIIEIGLAEIDLVKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI +V++ G L+E + ++N G N +A W D ++L EC K I
Sbjct: 65 TGITPRKVEKQGRPLAEVI---KSMIKNFGGNNKIYA--AWGRDD--LVLAKECADKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F ++NL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 MP--FKEYVNLATIYRIQNRLKEKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|343508458|ref|ZP_08745800.1| hypothetical protein VII00023_09119 [Vibrio ichthyoenteri ATCC
700023]
gi|342793772|gb|EGU29560.1| hypothetical protein VII00023_09119 [Vibrio ichthyoenteri ATCC
700023]
Length = 176
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C + D EIIE + V G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNIDGVGTTGEIIEIGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCVEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI +V++ G L+E + ++N G N +A W D ++L EC K I
Sbjct: 65 TGITPRKVEKQGRPLAEVI---KSMIKNFGGNNKIYA--AWGRDD--LVLAQECAAKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F ++NL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 MP--FKEYVNLATIYRIQNRLKEKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|28898216|ref|NP_797821.1| hypothetical protein VP1442 [Vibrio parahaemolyticus RIMD 2210633]
gi|153836508|ref|ZP_01989175.1| exonuclease KapD [Vibrio parahaemolyticus AQ3810]
gi|260361750|ref|ZP_05774777.1| exonuclease KapD [Vibrio parahaemolyticus K5030]
gi|260878557|ref|ZP_05890912.1| exonuclease KapD [Vibrio parahaemolyticus AN-5034]
gi|260898982|ref|ZP_05907423.1| exonuclease KapD [Vibrio parahaemolyticus Peru-466]
gi|260902016|ref|ZP_05910411.1| exonuclease KapD [Vibrio parahaemolyticus AQ4037]
gi|417319801|ref|ZP_12106350.1| hypothetical protein VP10329_13955 [Vibrio parahaemolyticus 10329]
gi|433657634|ref|YP_007275013.1| hypothetical protein VPBB_1353 [Vibrio parahaemolyticus BB22OP]
gi|28806433|dbj|BAC59705.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149750106|gb|EDM60851.1| exonuclease KapD [Vibrio parahaemolyticus AQ3810]
gi|308087959|gb|EFO37654.1| exonuclease KapD [Vibrio parahaemolyticus Peru-466]
gi|308091327|gb|EFO41022.1| exonuclease KapD [Vibrio parahaemolyticus AN-5034]
gi|308107728|gb|EFO45268.1| exonuclease KapD [Vibrio parahaemolyticus AQ4037]
gi|308113624|gb|EFO51164.1| exonuclease KapD [Vibrio parahaemolyticus K5030]
gi|328473772|gb|EGF44607.1| hypothetical protein VP10329_13955 [Vibrio parahaemolyticus 10329]
gi|432508322|gb|AGB09839.1| hypothetical protein VPBB_1353 [Vibrio parahaemolyticus BB22OP]
Length = 176
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWSENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L+E + ++N G +N +A +W D V+L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLAEVI---KSMIKNFGGRNKIYA--SWGRDD--VILLEECKQKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIEWEGRQHSGYVDAHNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|323497579|ref|ZP_08102596.1| hypothetical protein VISI1226_22170 [Vibrio sinaloensis DSM 21326]
gi|323317328|gb|EGA70322.1| hypothetical protein VISI1226_22170 [Vibrio sinaloensis DSM 21326]
Length = 176
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P N +S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLAKGEIVKRAQYYVKPE-NDEVSMFCVEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L ++N G N FA +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMVKNFGGSNKIFA--SWGRDD--LVLAQECQDKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 MP--FKEFINLATLYRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|226311041|ref|YP_002770935.1| hypothetical protein BBR47_14540 [Brevibacillus brevis NBRC 100599]
gi|226093989|dbj|BAH42431.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 113
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVS---SVTGQLEACFQTYVRPTCNQLLSDFCK 194
+++ D EATC ++ EIIE +V ++ +V G+ FQT+++P N +LSDFCK
Sbjct: 3 YIIFDLEATCWENDRTKQNEIIEIGAVKLNENLAVIGE----FQTFIKPKLNPILSDFCK 58
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD 240
LT I Q +VD+ + EA+ W+ + + + +W +D
Sbjct: 59 KLTSISQKEVDQAPSFGEAISHFQNWI------GSEYHLCSWGFYD 98
>gi|153831795|ref|ZP_01984462.1| exonuclease KapD [Vibrio harveyi HY01]
gi|156974798|ref|YP_001445705.1| hypothetical protein VIBHAR_02516 [Vibrio harveyi ATCC BAA-1116]
gi|388602338|ref|ZP_10160734.1| hypothetical protein VcamD_20896 [Vibrio campbellii DS40M4]
gi|148871793|gb|EDL70616.1| exonuclease KapD [Vibrio harveyi HY01]
gi|156526392|gb|ABU71478.1| hypothetical protein VIBHAR_02516 [Vibrio harveyi ATCC BAA-1116]
Length = 176
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L L+N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|424032748|ref|ZP_17772164.1| exonuclease family protein [Vibrio cholerae HENC-01]
gi|424039431|ref|ZP_17777805.1| exonuclease family protein [Vibrio cholerae HENC-02]
gi|408875358|gb|EKM14505.1| exonuclease family protein [Vibrio cholerae HENC-01]
gi|408892993|gb|EKM30325.1| exonuclease family protein [Vibrio cholerae HENC-02]
Length = 176
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L L+N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|91223788|ref|ZP_01259052.1| hypothetical protein V12G01_18627 [Vibrio alginolyticus 12G01]
gi|91191280|gb|EAS77545.1| hypothetical protein V12G01_18627 [Vibrio alginolyticus 12G01]
Length = 176
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L ++N G +N FA +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMVKNFGGRNKIFA--SWGRDD--LILLEECKQKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIDWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|443896564|dbj|GAC73908.1| hypothetical protein PANT_9d00324 [Pseudozyma antarctica T-34]
Length = 508
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 110 VENRFQFAPYNMLTPAHPYDFQPQEFQYFVVIDFEATCDKDKN-------------PYPQ 156
+ N +P N T D++P EF F+V+D EATC+ + YP
Sbjct: 36 LRNANSASPANAQTQDVDADWEP-EFDAFLVLDVEATCESTRKYRNLEHGYETGCFQYPN 94
Query: 157 EIIEFPSVIV----SSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVT 209
EIIE P V++ F ++VRPT L+ FC+DLTG+ Q +D T
Sbjct: 95 EIIELPVVLLRWNKDERRLDTAGVFHSFVRPTFRPQLTQFCRDLTGVTQAHIDAAPT 151
>gi|157693568|ref|YP_001488030.1| sporulation inhibitor KapD [Bacillus pumilus SAFR-032]
gi|157682326|gb|ABV63470.1| exonuclease [Bacillus pumilus SAFR-032]
Length = 206
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 139 VVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+V+DFE T D +PQ EIIE + +V + + + F +YV+P L+ CK
Sbjct: 8 LVVDFEFTM-PDGKYHPQNFFPEIIE--AGVVKAASETIIDTFSSYVKPKKFPKLTKRCK 64
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
GI Q V+ G++ EA + +K + G ++ ++TW N D +V L+ C I
Sbjct: 65 SFLGITQQDVESGISF-EAFI--EKLVSLDGGEDCE--IITWGNMDMKV-LKQNCMLNHI 118
Query: 255 WKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P+ + +L + FG L++A + G G+ H LDDA T +L L
Sbjct: 119 G-FPFKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQLFTLF 177
>gi|219668974|ref|YP_002459409.1| sporulation inhibitor KapD [Desulfitobacterium hafniense DCB-2]
gi|423074216|ref|ZP_17062948.1| exonuclease [Desulfitobacterium hafniense DP7]
gi|219539234|gb|ACL20973.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
hafniense DCB-2]
gi|361854934|gb|EHL06961.1| exonuclease [Desulfitobacterium hafniense DP7]
Length = 209
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSD 191
F+V+DFE + K + +P EIIE + ++ S G+L + F +V+P L++
Sbjct: 3 FLVVDFEFSVPQSYGKPRAWFP-EIIEVGATVLDS-NGKLALDKTFNAFVKPRFWPRLAE 60
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
+TGI+Q VD+G+ L EA+ K + + VV W + D R +L + C
Sbjct: 61 ESYGITGIRQEDVDQGILLEEAIQHLQK------LAHPEAYVVAWGDAD-RKILGNVCEK 113
Query: 252 KKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + +I+L + H +LK+A+E + G H LDDA N A+++
Sbjct: 114 YGLKYPFVWENYIDLAEQYKHYRSLDHLISLKKAIEENSIEQIGILHSALDDAINAAQVM 173
Query: 311 ALLMHRG 317
A +M G
Sbjct: 174 ARMMSEG 180
>gi|343497491|ref|ZP_08735557.1| hypothetical protein VINI7043_25482 [Vibrio nigripulchritudo ATCC
27043]
gi|342818231|gb|EGU53100.1| hypothetical protein VINI7043_25482 [Vibrio nigripulchritudo ATCC
27043]
Length = 176
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C + D EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWNTDGVGTTGEIIEVGLAEIDLQKGEVVKRAQYYVKPEQDEI-SLFCSEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L++ + ++N G N +A +W D ++L++EC K+I
Sbjct: 65 TGITPRKIEKQGRPLADVI---QSMVKNFGGANKIYA--SWGRDD--LILKAECESKEID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL+
Sbjct: 118 LP--FKEFINLATLYRVQNRLKDKRIGHKAAQEEKGIEWEGRQHSGFVDAYNLAK-LALV 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|226314204|ref|YP_002774100.1| hypothetical protein BBR47_46190 [Brevibacillus brevis NBRC 100599]
gi|226097154|dbj|BAH45596.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 239
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+V D E T ++ P EIIE + +V G FQ Y P + +S+ +
Sbjct: 3 IIVFDLETTLTYQRDKIP-EIIEIGAAKVVPGKNGVEVDTFQRYTFPAIERRISERTRKF 61
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
G+ + + + A KW+ N ++ + + TW D R+M+E RF +
Sbjct: 62 IGLDKENMPTFIPFRRAFAEFLKWIGN----DSEYYLCTWGQDDKRLMIEHCARFGLDFN 117
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + +++ P + + +LKEA++ AG+ +GR H L DA +TA LL
Sbjct: 118 --WMRNYNDIQPPISLLLADRKQMSLKEAIDTAGIIQEGRLHSALVDAIHTAHLL 170
>gi|444516848|gb|ELV11300.1| Tankyrase-1 [Tupaia chinensis]
Length = 1316
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 30/138 (21%)
Query: 135 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ Y VIDFEATC++ P + EIIEFP V++++ T +++
Sbjct: 44 YDYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEID------------------- 84
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 252
QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 85 ---------QVDRADTFPQVLKKVTDWMKLKELGTKYKYSILTDGSWDMSKFLNMQCQLS 135
Query: 253 KIWKPPYFNRWINLKVPF 270
++ P + +WIN++ +
Sbjct: 136 RLRYPSFAKKWINIRKSY 153
>gi|374601810|ref|ZP_09674808.1| hypothetical protein PDENDC454_02660 [Paenibacillus dendritiformis
C454]
gi|374392676|gb|EHQ64000.1| hypothetical protein PDENDC454_02660 [Paenibacillus dendritiformis
C454]
Length = 222
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEACFQTYVRPTCNQLLSDFCKDL 196
++ D E T + K + EIIE +V V+ G+ + FQ +V+PT + LS +
Sbjct: 4 IIYDLEMTVKRKKGEFA-EIIEIGAVKVAEQDGKAAIVDTFQAFVKPTLSPKLSQDTVNF 62
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI+Q V+ L + L + W++ + ++A+ +W D + ECR K+I
Sbjct: 63 TGIRQEDVNASPVLQDVLDQFVAWIDTE-----DYALCSWGP-DDKAQFLKECRMKRI-- 114
Query: 257 PPYFNR-WINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
P ++ R NL+ P V + LK A++ + + G H LDDA NTA +
Sbjct: 115 PLHWLRNHNNLQKPVSLVMNRGSHQQVGLKTALDTLQVPFVGTQHRALDDAYNTALI 171
>gi|89894542|ref|YP_518029.1| sporulation inhibitor KapD [Desulfitobacterium hafniense Y51]
gi|89333990|dbj|BAE83585.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 222
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSD 191
F+V+DFE + K + +P EIIE + ++ S G+L + F +V+P L++
Sbjct: 16 FLVVDFEFSVPQSYGKPRAWFP-EIIEVGATVLDS-NGKLALDKTFNAFVKPRFWPRLAE 73
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
+TGI+Q VD+G+ L EA+ K + + VV W + D R +L + C
Sbjct: 74 ESYGITGIRQEDVDQGILLEEAIQHLQK------LAHPEAYVVAWGDAD-RKILGNVCEK 126
Query: 252 KKIWKPPYFNRWINLKVPF-HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + +I+L + H +LK+A+E + G H LDDA N A+++
Sbjct: 127 YGLKYPFVWENYIDLAEQYKHYRSLDHLISLKKAIEENSIEQIGILHSALDDAINAAQVM 186
Query: 311 ALLMHRGF 318
A +M G+
Sbjct: 187 ARMMSEGW 194
>gi|311069646|ref|YP_003974569.1| sporulation inhibitor KapD [Bacillus atrophaeus 1942]
gi|419821991|ref|ZP_14345578.1| sporulation inhibitor KapD [Bacillus atrophaeus C89]
gi|310870163|gb|ADP33638.1| sporulation inhibitor KapD [Bacillus atrophaeus 1942]
gi|388473914|gb|EIM10650.1| sporulation inhibitor KapD [Bacillus atrophaeus C89]
Length = 205
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 138 FVVIDFEATCDKDK----NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
++IDFE T + K N +P EIIE + IV SV + F +Y++P L+ C
Sbjct: 6 LLIIDFEFTMPEGKYSPQNFFP-EIIE--AGIVKSVDDAVVETFSSYIKPKKFPKLTKRC 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
K I Q VD G+ E + + ++ K + +VTW N D +V L+ C F
Sbjct: 63 KSFLKITQKDVDEGMKFEEFIRKLNELDPQK-----DCTIVTWGNMDMKV-LKQNCMFNH 116
Query: 254 IWKP-PYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P P+ +L + + FG L +A E G G H LDDA T +L
Sbjct: 117 I--PFPFKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDEGTGTHHKALDDALTTHKLF 173
>gi|269963670|ref|ZP_06177992.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|424043321|ref|ZP_17780959.1| exonuclease family protein [Vibrio cholerae HENC-03]
gi|269831582|gb|EEZ85719.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408889271|gb|EKM27696.1| exonuclease family protein [Vibrio cholerae HENC-03]
Length = 176
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L L+N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKEKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|59712121|ref|YP_204897.1| exonuclease KapD [Vibrio fischeri ES114]
gi|197336268|ref|YP_002156326.1| exonuclease KapD [Vibrio fischeri MJ11]
gi|423686277|ref|ZP_17661085.1| exonuclease KapD [Vibrio fischeri SR5]
gi|59480222|gb|AAW86009.1| exonuclease KapD [Vibrio fischeri ES114]
gi|197317758|gb|ACH67205.1| exonuclease KapD [Vibrio fischeri MJ11]
gi|371494345|gb|EHN69943.1| exonuclease KapD [Vibrio fischeri SR5]
Length = 176
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C +++ EIIE + G++ Q YV+P +++ S FC
Sbjct: 3 FNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLTKGEVVKRAQYYVKPEKDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
DLTGI ++++ G L++ L ++N G TN W + + +LE+EC+ K
Sbjct: 62 VDLTGISPRKIEKQGRPLADVL---KSMVKNFG--GTNKIYAAWGHDE--QILEAECKAK 114
Query: 253 KIWKPPYFNRWINLKVPFH--EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P FN ++NL + R + A+E + W+GR H G DA N A+L
Sbjct: 115 GIEVP--FNEFLNLATIYRIRSRKKNERMGQRRAMEELNIEWEGRQHSGYVDAYNLAQL 171
>gi|390457404|ref|ZP_10242932.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus peoriae KCTC 3763]
Length = 223
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEA-CFQTYVRPTCNQLLSDFCKD 195
+++ D E T ++ Y EII+ +V +V G A F ++VRP+ +LS
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLSTDTVQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q +D EA+ + WL ++++ + W D R L S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFVAWLGT----DSSYYLCAWGP-DDRQKLVSHCRTHHV- 115
Query: 256 KPPYFNRWINLKVPFHEVFGG----VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + +++ P +FG + +L +A+E+ + + G+ H LDDA NTA++
Sbjct: 116 DLGWIHNTNDIQKPISRLFGSGGKYRQLSLSQALELCHIDFDGQQHRALDDAINTAQVFM 175
Query: 312 LLMHR 316
L R
Sbjct: 176 HLFDR 180
>gi|225028307|ref|ZP_03717499.1| hypothetical protein EUBHAL_02579 [Eubacterium hallii DSM 3353]
gi|224954353|gb|EEG35562.1| hypothetical protein EUBHAL_02579 [Eubacterium hallii DSM 3353]
Length = 210
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 154 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA 213
Y EII+ +V++ ++ Q YV P +L F +LTGI++ Q+ L +A
Sbjct: 15 YASEIIQVGAVLLDEEYKEIGTLCQ-YVHPEFG-ILDYFITNLTGIEKGQIKNAPKLKDA 72
Query: 214 LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI--------WKPPYFNRWIN 265
L+ WL + + V WS D L+ E + KK+ KP RW++
Sbjct: 73 LIHMADWLGER-----EYKVFAWSKSDY-WQLDHEIKSKKLNDEKLDELMKP---ERWVD 123
Query: 266 LKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ E+FG L+EA+ + + GR H GLDDA NTARL+ L
Sbjct: 124 ----YQEIFGKKYNFEQAVGLQEALMLCDIEPDGRMHDGLDDAWNTARLIEKL 172
>gi|443243600|ref|YP_007376825.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
gi|442800999|gb|AGC76804.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
Length = 182
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
++ID EATC K P Q EIIE ++++ T + ++P +S FC +
Sbjct: 6 IIIIDLEATCWNGKVPTGQVNEIIEIGICVLNTNTSVITRQKGILIQPE-RSTVSTFCTE 64
Query: 196 LTGIQQIQVDR-GVTLSEAL--LRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
LT I Q +D+ GV+ EA LR + + + ++ +D M++ +C+ +
Sbjct: 65 LTTITQELLDKEGVSFKEACTQLREEYHAHH-------YTWASYGAYDLN-MMKKQCKMR 116
Query: 253 KIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P N IN+K F EV G + +K A+ + +G H G+DDA N A++L
Sbjct: 117 GMEYPLAQNH-INVKTLFSEVKGLKGKVGMKGALGILNFPLEGTHHRGVDDANNIAKIL 174
>gi|350531081|ref|ZP_08910022.1| hypothetical protein VrotD_08162 [Vibrio rotiferianus DAT722]
Length = 176
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCVEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L L+N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGID 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R K A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|162452505|ref|YP_001614872.1| exonuclease [Sorangium cellulosum So ce56]
gi|161163087|emb|CAN94392.1| putative exonuclease [Sorangium cellulosum So ce56]
Length = 184
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+ +VID EATC D D P + EIIE + + + VRP +++ S
Sbjct: 3 KRLDLILVIDVEATCWDGDPPPGEENEIIEIGVCPLEVASCRRRERRSILVRPERSRV-S 61
Query: 191 DFCKDLTGIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESE 248
FC LT + Q VD GV+ EA LR + +K + ++ ++D R M E +
Sbjct: 62 PFCTALTTLTQADVDAGVSFREACATLRSE-------LKAQDRLWASYGDYD-RRMFERQ 113
Query: 249 CRFKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
C+ + + P+ +N+K F R + EA+E AGL G H G+DDA N
Sbjct: 114 CQSRGV-PLPFGPSHLNVKSLFAVTHALSREVGMAEALERAGLPLAGTHHRGVDDAHN 170
>gi|262394326|ref|YP_003286180.1| hypothetical protein VEA_003555 [Vibrio sp. Ex25]
gi|451972281|ref|ZP_21925491.1| hypothetical protein C408_2103 [Vibrio alginolyticus E0666]
gi|262337920|gb|ACY51715.1| hypothetical protein VEA_003555 [Vibrio sp. Ex25]
gi|451931791|gb|EMD79475.1| hypothetical protein C408_2103 [Vibrio alginolyticus E0666]
Length = 176
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSRGEIVKRAQYYVKPEHDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L ++N G +N +A +W D ++L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMVKNFGGRNKIYA--SWGRDD--LILLEECKQKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIDWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|291520945|emb|CBK79238.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Coprococcus catus GD/7]
Length = 218
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 137 YFVVIDFEATCDKDKN------PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+++VID E C ++ Y E I+ +V+++ Q+ + YV P + ++
Sbjct: 2 FYLVIDLE-MCRVPRDYRNKAYHYAYETIQIGAVLLNEEFKQV-GTIREYVHPE-HGVID 58
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
F + LTGI+ QV + + EAL+ W I + + V TWS D R L E
Sbjct: 59 PFIEKLTGIKNSQVKKAPCIGEALVHMIDW-----IGDREYKVYTWSESD-RNQLLHEIT 112
Query: 251 FKKIWKPPY-----FNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAK 304
K+I +RW++ ++ F + F R +L+EA+ A + +G+ H G+DDA
Sbjct: 113 AKQITDESVDAFMMEDRWVDYQMVFSQRFQLTRRISLEEALGRADIDPKGKFHDGMDDAV 172
Query: 305 NTARLLALL 313
NT L+ L
Sbjct: 173 NTGLLIEKL 181
>gi|295696595|ref|YP_003589833.1| Exonuclease RNase T and DNA polymerase III [Kyrpidia tusciae DSM
2912]
gi|295412197|gb|ADG06689.1| Exonuclease RNase T and DNA polymerase III [Kyrpidia tusciae DSM
2912]
Length = 212
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 136 QYFVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ + +DFE T +D++ Q EIIE +VS + G++ T+VRP L++
Sbjct: 3 EQLLFLDFEFTMPEDRSTPEQFRPEIIELG--LVSVIDGEIFDRLSTFVRPMRFPTLTER 60
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK+ I+Q VD G++ E + ++E VTW N D +V+ E+ C
Sbjct: 61 CKNFLQIRQEDVDAGISFRELVETLQTYVE-----LCPTTPVTWGNADLQVLREN-CGHA 114
Query: 253 KIWKP-PYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P P+ R +L + + FG + L +A+E G GR H LDDA T +
Sbjct: 115 GL--PFPFDRRERDLSLEYKRFFGNRQQTGLWKAIEEYGRTGVGRHHRALDDALTTVEIF 172
Query: 311 ALL 313
++
Sbjct: 173 RMI 175
>gi|422405226|ref|ZP_16482272.1| exonuclease, partial [Pseudomonas syringae pv. glycinea str. race
4]
gi|330879830|gb|EGH13979.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 143
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP +L+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDH-FERFVRPARRPVLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q +D L+ + ++WL + + +A +W ++D R LE E R+ ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYD-RQQLEEEWRYHRL 117
>gi|389573727|ref|ZP_10163799.1| sporulation inhibitor KapD [Bacillus sp. M 2-6]
gi|388426580|gb|EIL84393.1| sporulation inhibitor KapD [Bacillus sp. M 2-6]
Length = 205
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
E + +V+DFE T D +PQ EIIE V S+ T + F +YV+P L
Sbjct: 2 EQKTLLVVDFEFTM-PDGKYHPQNFFPEIIEAGVVKASNET--IIDTFSSYVKPKKFPKL 58
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+ CK GI Q V+ G++ EA + +K + G ++ ++TW N D +V L+ C
Sbjct: 59 TKRCKSFLGITQQDVESGISF-EAFI--EKLVSLDGGEDCE--IITWGNMDMKV-LKQNC 112
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I P N+ +L + FG L++A + G G+ H LDDA T +
Sbjct: 113 MLNHIGFPFKGNQR-DLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQ 171
Query: 309 LLALL 313
L L
Sbjct: 172 LFTLF 176
>gi|375265428|ref|YP_005022871.1| hypothetical protein VEJY3_07015 [Vibrio sp. EJY3]
gi|369840749|gb|AEX21893.1| hypothetical protein VEJY3_07015 [Vibrio sp. EJY3]
Length = 176
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + G++ Q YV+P +++ S FC +L
Sbjct: 6 IVCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEQDEV-SLFCAEL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI ++++ G L E L ++N G +N +A +W D +L EC+ K I
Sbjct: 65 TGITPRKIEKQGRPLEEVL---KSMVKNFGGRNKIYA--SWGRDD--TILLDECKQKGIE 117
Query: 256 KPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P F +INL + R + A E G+ W+GR H G DA N A+ LAL
Sbjct: 118 AP--FTEFINLATLYRIQNRLKEKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAK-LALT 174
Query: 314 M 314
M
Sbjct: 175 M 175
>gi|254417569|ref|ZP_05031307.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
gi|196175667|gb|EDX70693.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
Length = 191
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+VID EATC + K P QE IIE ++ + V+P +S+FC +
Sbjct: 8 ILVIDVEATCWQGKPPPGQESEIIEIGVCLLDCHSHSAVKTESMLVKPE-RSTVSEFCTE 66
Query: 196 LTGIQQIQVDRGVTLSEALLR-HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT + Q QVD+G++ ++A R ++L ++ + ++ +D + + +C+ +
Sbjct: 67 LTTLTQEQVDQGMSFAQACERLQKRYLSHQRV------WASYGEYD-KNQFQKQCQSFGV 119
Query: 255 WKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ P+ +R IN+K F + + + +A+ + L+ QG H G+DDA N R+L+ L
Sbjct: 120 -EYPFDSRHINVKTWFALAYSLQKEVGMLKALFLLKLSLQGTHHRGVDDAANIGRILSQL 178
Query: 314 M 314
+
Sbjct: 179 L 179
>gi|163814599|ref|ZP_02205988.1| hypothetical protein COPEUT_00750 [Coprococcus eutactus ATCC 27759]
gi|158450234|gb|EDP27229.1| exonuclease [Coprococcus eutactus ATCC 27759]
Length = 227
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 138 FVVIDFEATC-----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+V +DFE ++K EIIE +V + ++++ F++YV+P + S
Sbjct: 11 YVFVDFEMNLIDSEHKQEKKICKSEIIEIGAVKLDDEYNEIDS-FKSYVKPAYGNMASRI 69
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
K LTGI ++ + +A+ R +W + + + WS D R L E R K
Sbjct: 70 IK-LTGITDEMLETAPSYEDAVGRFIEWCADADV------IYAWSENDLR-QLRGETRLK 121
Query: 253 KIWKPPY---FNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P F +W + + + + G R +L +AV G +QG H L DA+NTA
Sbjct: 122 QYTHPELERVFAKWQDFQKEYARMIGTSRRISLSDAVFYLGENFQGAEHDALWDARNTAE 181
Query: 309 LLAL 312
+ L
Sbjct: 182 VFKL 185
>gi|388492040|gb|AFK34086.1| unknown [Lotus japonicus]
Length = 99
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 314 MHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLD 358
MH+GFKFSITNS+MWQT+D SL W Q PE++ + PH +K D++
Sbjct: 1 MHKGFKFSITNSIMWQTSDRSLMWKQSPEQMSVFPHYPYKAKDMN 45
>gi|254508126|ref|ZP_05120252.1| exonuclease KapD [Vibrio parahaemolyticus 16]
gi|219548961|gb|EED25960.1| exonuclease KapD [Vibrio parahaemolyticus 16]
Length = 164
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + V G++ Q YV+P +++ S FC +LTGI +V++ G L E L
Sbjct: 14 EIIEVGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCVELTGITPRKVEKQGRPLEEVL- 71
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N FA +W D V+L EC K I P F +INL +
Sbjct: 72 --KSVVKNFGGSNKIFA--SWGRDD--VVLAKECEAKGIEMP--FKEFINLATLYRIQNR 123
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H DA N A+ LAL M
Sbjct: 124 LKDKRIGHRAAQESKGIEWEGRQHSAYVDAYNLAK-LALTM 163
>gi|402818180|ref|ZP_10867765.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
gi|402504271|gb|EJW14801.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
Length = 224
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEACFQTYVRPTCNQLLSDFCKDL 196
++ D E T + K + EIIE +V V+ + + FQ +V+PT + L++ +
Sbjct: 4 IIYDLEMTVKRKKGAFA-EIIEIGAVKVTESDDKFVIADTFQAFVKPTLSPKLTEDTVNF 62
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI-- 254
TGI Q + TL + L + W I ++A+ +W D + ECR KKI
Sbjct: 63 TGITQEDITNASTLQDVLDQFIAW-----IDTDDYALCSWGP-DDKTQFLKECRQKKIPL 116
Query: 255 -WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
W + N + + LK A+E + + G H LDDA NTA L+ +
Sbjct: 117 HWLRNHNNLQKQVSTAMKREHNQ-QIGLKSALEALDVPFVGNQHRALDDAYNTA-LIYIR 174
Query: 314 MHRGFKFS 321
M + +
Sbjct: 175 MQEHIQLT 182
>gi|256375737|ref|YP_003099397.1| exonuclease RNase T and DNA polymerase III [Actinosynnema mirum DSM
43827]
gi|255920040|gb|ACU35551.1| Exonuclease RNase T and DNA polymerase III [Actinosynnema mirum DSM
43827]
Length = 180
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+V+D EATC + P Q +IIE G+ VRPT +++ S F
Sbjct: 5 LDRVLVVDVEATCWEGAPPGGQVSDIIEIGVCEYDVALGERVERHSLLVRPTRSEV-SPF 63
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C LT + Q QV RGV A R L G + +A ++ ++D R + +C
Sbjct: 64 CTSLTTLTQEQVGRGVDFGVACAR----LRELGSRERVWA--SYGDYD-RNQFQRQCADL 116
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P+ R +N+K F G R + +A+ +AGL G H G DDA N A LL
Sbjct: 117 GV-AYPFGPRHLNVKTLFALSRGLHREVGMAQALALAGLPLDGTHHRGDDDAWNIAALLG 175
Query: 312 LLMHR 316
L+ R
Sbjct: 176 TLLVR 180
>gi|295094549|emb|CBK83640.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Coprococcus sp. ART55/1]
Length = 216
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 138 FVVIDFE-----ATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+V +DFE + K+K EIIE +V + ++++ F++YV+P + S
Sbjct: 3 YVFVDFEMNMIDSEYKKEKKICKSEIIEIGAVKLDEDYNEIDS-FKSYVKPAYGTMASRI 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
K LTGI V+ + + A+ +W + + + WS D R L E R K
Sbjct: 62 IK-LTGITDDMVEDAPSYAFAMGSFIEWCADADV------IYAWSENDLR-QLRKEARLK 113
Query: 253 KIWKP---PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P +RW + + + ++ G R +L +AV G +QG H L DA+NTA
Sbjct: 114 EYTHPGLESIISRWKDFQKEYAKLIGTSRRISLSDAVFYLGENFQGAEHDALWDARNTAE 173
Query: 309 LLAL 312
+ L
Sbjct: 174 VFKL 177
>gi|407979850|ref|ZP_11160656.1| sporulation inhibitor KapD [Bacillus sp. HYC-10]
gi|407413500|gb|EKF35203.1| sporulation inhibitor KapD [Bacillus sp. HYC-10]
Length = 205
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
E + +V+DFE T D +PQ EIIE V S+ T + F +YV+P L
Sbjct: 2 EQKTLLVVDFEFTM-PDGKYHPQNFFPEIIEAGVVKASNET--IIDTFSSYVKPKKFPKL 58
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESEC 249
+ CK GI Q V+ GV+ + + +G + ++TW N D +V L+ C
Sbjct: 59 TKRCKSFLGITQQDVENGVSFETFIEKLVSLDGGEGCE-----IITWGNMDMKV-LKQNC 112
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGG-VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I P+ + +L + FG L++A + G G+ H LDDA T +
Sbjct: 113 MLNHI-AFPFKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSDGAGQHHKALDDAMTTYQ 171
Query: 309 LLALL 313
L L
Sbjct: 172 LFTLF 176
>gi|389577928|ref|ZP_10167956.1| DNA polymerase III epsilon subunit-like 3'-5' exonuclease
[Eubacterium cellulosolvens 6]
gi|389313413|gb|EIM58346.1| DNA polymerase III epsilon subunit-like 3'-5' exonuclease
[Eubacterium cellulosolvens 6]
Length = 221
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 139 VVIDFEATCDKDKNPYPQ----EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+V+D E K+ + E IE +V++ ++ +CF+TYV+P ++
Sbjct: 4 IVVDLEMNSISRKSEARRICNLETIEIGAVMLDDDLQEI-SCFRTYVKPEYADGIAGNIT 62
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LTGI V+ +EAL W G T A WS+ D + E K+
Sbjct: 63 ILTGITDDMVENAPKFNEALRMFTNWCLGTGDAVTIHA---WSDSDYN-QIAKEIVLKRY 118
Query: 255 WKPP-----YFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
N W + + F G R +LK A+ MAG+ + GR H LDDA+NTA
Sbjct: 119 DVSAEEAELLGNAWSDFQQEFDSHLGFERQMSLKMALNMAGIDFTGREHDALDDARNTAE 178
Query: 309 LL 310
LL
Sbjct: 179 LL 180
>gi|15641389|ref|NP_231021.1| hypothetical protein VC1377 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588011|ref|ZP_01677763.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121728525|ref|ZP_01681548.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675170|ref|YP_001216938.1| hypothetical protein VC0395_A0992 [Vibrio cholerae O395]
gi|153212725|ref|ZP_01948382.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817774|ref|ZP_01970441.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821312|ref|ZP_01973979.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825269|ref|ZP_01977936.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828771|ref|ZP_01981438.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|183179375|ref|ZP_02957586.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|227081548|ref|YP_002810099.1| hypothetical protein VCM66_1332 [Vibrio cholerae M66-2]
gi|227117842|ref|YP_002819738.1| hypothetical protein VC395_1496 [Vibrio cholerae O395]
gi|229505042|ref|ZP_04394552.1| hypothetical protein VCF_000248 [Vibrio cholerae BX 330286]
gi|229511288|ref|ZP_04400767.1| hypothetical protein VCE_002695 [Vibrio cholerae B33]
gi|229515749|ref|ZP_04405208.1| hypothetical protein VCB_003407 [Vibrio cholerae TMA 21]
gi|229518406|ref|ZP_04407850.1| hypothetical protein VCC_002430 [Vibrio cholerae RC9]
gi|229521489|ref|ZP_04410908.1| hypothetical protein VIF_002026 [Vibrio cholerae TM 11079-80]
gi|229529547|ref|ZP_04418937.1| hypothetical protein VCG_002642 [Vibrio cholerae 12129(1)]
gi|229608046|ref|YP_002878694.1| hypothetical protein VCD_002964 [Vibrio cholerae MJ-1236]
gi|254225334|ref|ZP_04918946.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254286171|ref|ZP_04961131.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848499|ref|ZP_05237849.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297578962|ref|ZP_06940890.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498539|ref|ZP_07008346.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360035273|ref|YP_004937036.1| hypothetical protein Vch1786_I0878 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741178|ref|YP_005333147.1| hypothetical protein O3Y_06405 [Vibrio cholerae IEC224]
gi|384424494|ref|YP_005633852.1| hypothetical protein VCLMA_A1213 [Vibrio cholerae LMA3984-4]
gi|417813394|ref|ZP_12460051.1| exonuclease family protein [Vibrio cholerae HC-49A2]
gi|417816258|ref|ZP_12462890.1| exonuclease family protein [Vibrio cholerae HCUF01]
gi|418337149|ref|ZP_12946047.1| exonuclease family protein [Vibrio cholerae HC-23A1]
gi|418343664|ref|ZP_12950448.1| exonuclease family protein [Vibrio cholerae HC-28A1]
gi|418354754|ref|ZP_12957475.1| exonuclease family protein [Vibrio cholerae HC-61A1]
gi|419825861|ref|ZP_14349365.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|421316526|ref|ZP_15767097.1| exonuclease family protein [Vibrio cholerae CP1032(5)]
gi|421328638|ref|ZP_15779152.1| exonuclease family protein [Vibrio cholerae CP1042(15)]
gi|421331662|ref|ZP_15782142.1| exonuclease family protein [Vibrio cholerae CP1046(19)]
gi|421347399|ref|ZP_15797781.1| exonuclease family protein [Vibrio cholerae HC-46A1]
gi|421354144|ref|ZP_15804476.1| exonuclease family protein [Vibrio cholerae HE-45]
gi|422891483|ref|ZP_16933861.1| exonuclease family protein [Vibrio cholerae HC-40A1]
gi|422902695|ref|ZP_16937691.1| exonuclease family protein [Vibrio cholerae HC-48A1]
gi|422906573|ref|ZP_16941403.1| exonuclease family protein [Vibrio cholerae HC-70A1]
gi|422910488|ref|ZP_16945127.1| exonuclease family protein [Vibrio cholerae HE-09]
gi|422913156|ref|ZP_16947675.1| exonuclease family protein [Vibrio cholerae HFU-02]
gi|422922689|ref|ZP_16955868.1| exonuclease family protein [Vibrio cholerae BJG-01]
gi|422925636|ref|ZP_16958661.1| exonuclease family protein [Vibrio cholerae HC-38A1]
gi|423144958|ref|ZP_17132567.1| exonuclease family protein [Vibrio cholerae HC-19A1]
gi|423149637|ref|ZP_17136965.1| exonuclease family protein [Vibrio cholerae HC-21A1]
gi|423156264|ref|ZP_17143368.1| exonuclease family protein [Vibrio cholerae HC-32A1]
gi|423160089|ref|ZP_17147057.1| exonuclease family protein [Vibrio cholerae HC-33A2]
gi|423164812|ref|ZP_17151567.1| exonuclease family protein [Vibrio cholerae HC-48B2]
gi|423755846|ref|ZP_17712267.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|423880556|ref|ZP_17723452.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|423892630|ref|ZP_17726313.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|423927408|ref|ZP_17730930.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|424001956|ref|ZP_17745042.1| exonuclease family protein [Vibrio cholerae HC-17A2]
gi|424006114|ref|ZP_17749094.1| exonuclease family protein [Vibrio cholerae HC-37A1]
gi|424024132|ref|ZP_17763792.1| exonuclease family protein [Vibrio cholerae HC-62B1]
gi|424026982|ref|ZP_17766595.1| exonuclease family protein [Vibrio cholerae HC-69A1]
gi|424586255|ref|ZP_18025844.1| exonuclease family protein [Vibrio cholerae CP1030(3)]
gi|424594956|ref|ZP_18034289.1| exonuclease family protein [Vibrio cholerae CP1040(13)]
gi|424598822|ref|ZP_18038015.1| exonuclease family protein [Vibrio Cholerae CP1044(17)]
gi|424601560|ref|ZP_18040712.1| exonuclease family protein [Vibrio cholerae CP1047(20)]
gi|424606552|ref|ZP_18045512.1| exonuclease family protein [Vibrio cholerae CP1050(23)]
gi|424610382|ref|ZP_18049236.1| exonuclease family protein [Vibrio cholerae HC-39A1]
gi|424617003|ref|ZP_18055690.1| exonuclease family protein [Vibrio cholerae HC-42A1]
gi|424633267|ref|ZP_18071377.1| exonuclease family protein [Vibrio cholerae HC-52A1]
gi|424648328|ref|ZP_18085998.1| exonuclease family protein [Vibrio cholerae HC-57A1]
gi|424652607|ref|ZP_18090083.1| exonuclease family protein [Vibrio cholerae HC-57A2]
gi|424656511|ref|ZP_18093809.1| exonuclease family protein [Vibrio cholerae HC-81A2]
gi|429887192|ref|ZP_19368717.1| hypothetical protein OSU_2328 [Vibrio cholerae PS15]
gi|440709633|ref|ZP_20890290.1| hypothetical protein VC4260B_10350 [Vibrio cholerae 4260B]
gi|443503464|ref|ZP_21070443.1| exonuclease family protein [Vibrio cholerae HC-64A1]
gi|443507365|ref|ZP_21074149.1| exonuclease family protein [Vibrio cholerae HC-65A1]
gi|443511492|ref|ZP_21078147.1| exonuclease family protein [Vibrio cholerae HC-67A1]
gi|443515047|ref|ZP_21081574.1| exonuclease family protein [Vibrio cholerae HC-68A1]
gi|443518845|ref|ZP_21085255.1| exonuclease family protein [Vibrio cholerae HC-71A1]
gi|443523735|ref|ZP_21089962.1| exonuclease family protein [Vibrio cholerae HC-72A2]
gi|443535122|ref|ZP_21101015.1| exonuclease family protein [Vibrio cholerae HC-80A1]
gi|443538689|ref|ZP_21104544.1| exonuclease family protein [Vibrio cholerae HC-81A1]
gi|449056137|ref|ZP_21734805.1| Hypothetical protein B839_22370 [Vibrio cholerae O1 str. Inaba
G4222]
gi|9655872|gb|AAF94535.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547752|gb|EAX57843.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121629189|gb|EAX61629.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124116375|gb|EAY35195.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622175|gb|EAZ50497.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126511712|gb|EAZ74306.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521130|gb|EAZ78353.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146317053|gb|ABQ21592.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|148875724|gb|EDL73859.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149741097|gb|EDM55156.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423840|gb|EDN15781.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|183012786|gb|EDT88086.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|227009436|gb|ACP05648.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227013292|gb|ACP09502.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229333321|gb|EEN98807.1| hypothetical protein VCG_002642 [Vibrio cholerae 12129(1)]
gi|229341587|gb|EEO06590.1| hypothetical protein VIF_002026 [Vibrio cholerae TM 11079-80]
gi|229345121|gb|EEO10095.1| hypothetical protein VCC_002430 [Vibrio cholerae RC9]
gi|229347518|gb|EEO12478.1| hypothetical protein VCB_003407 [Vibrio cholerae TMA 21]
gi|229351253|gb|EEO16194.1| hypothetical protein VCE_002695 [Vibrio cholerae B33]
gi|229357265|gb|EEO22182.1| hypothetical protein VCF_000248 [Vibrio cholerae BX 330286]
gi|229370701|gb|ACQ61124.1| hypothetical protein VCD_002964 [Vibrio cholerae MJ-1236]
gi|254844204|gb|EET22618.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536556|gb|EFH75389.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542872|gb|EFH78922.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327484047|gb|AEA78454.1| hypothetical protein VCLMA_A1213 [Vibrio cholerae LMA3984-4]
gi|340041984|gb|EGR02950.1| exonuclease family protein [Vibrio cholerae HCUF01]
gi|340042698|gb|EGR03663.1| exonuclease family protein [Vibrio cholerae HC-49A2]
gi|341623308|gb|EGS48850.1| exonuclease family protein [Vibrio cholerae HC-48A1]
gi|341623471|gb|EGS49004.1| exonuclease family protein [Vibrio cholerae HC-70A1]
gi|341624531|gb|EGS50023.1| exonuclease family protein [Vibrio cholerae HC-40A1]
gi|341633406|gb|EGS58214.1| exonuclease family protein [Vibrio cholerae HE-09]
gi|341639593|gb|EGS64210.1| exonuclease family protein [Vibrio cholerae HFU-02]
gi|341645177|gb|EGS69327.1| exonuclease family protein [Vibrio cholerae BJG-01]
gi|341647218|gb|EGS71304.1| exonuclease family protein [Vibrio cholerae HC-38A1]
gi|356419653|gb|EHH73198.1| exonuclease family protein [Vibrio cholerae HC-21A1]
gi|356424701|gb|EHH78100.1| exonuclease family protein [Vibrio cholerae HC-19A1]
gi|356432727|gb|EHH85924.1| exonuclease family protein [Vibrio cholerae HC-23A1]
gi|356436078|gb|EHH89205.1| exonuclease family protein [Vibrio cholerae HC-28A1]
gi|356441938|gb|EHH94814.1| exonuclease family protein [Vibrio cholerae HC-32A1]
gi|356448545|gb|EHI01309.1| exonuclease family protein [Vibrio cholerae HC-33A2]
gi|356453156|gb|EHI05819.1| exonuclease family protein [Vibrio cholerae HC-61A1]
gi|356454337|gb|EHI06985.1| exonuclease family protein [Vibrio cholerae HC-48B2]
gi|356646427|gb|AET26482.1| conserved hypothetical protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794688|gb|AFC58159.1| hypothetical protein O3Y_06405 [Vibrio cholerae IEC224]
gi|395921483|gb|EJH32303.1| exonuclease family protein [Vibrio cholerae CP1032(5)]
gi|395930144|gb|EJH40893.1| exonuclease family protein [Vibrio cholerae CP1042(15)]
gi|395932926|gb|EJH43669.1| exonuclease family protein [Vibrio cholerae CP1046(19)]
gi|395946459|gb|EJH57123.1| exonuclease family protein [Vibrio cholerae HC-46A1]
gi|395953269|gb|EJH63882.1| exonuclease family protein [Vibrio cholerae HE-45]
gi|395961538|gb|EJH71861.1| exonuclease family protein [Vibrio cholerae HC-57A2]
gi|395964714|gb|EJH74913.1| exonuclease family protein [Vibrio cholerae HC-42A1]
gi|395975649|gb|EJH85133.1| exonuclease family protein [Vibrio cholerae CP1030(3)]
gi|395977336|gb|EJH86747.1| exonuclease family protein [Vibrio cholerae CP1047(20)]
gi|408008249|gb|EKG46253.1| exonuclease family protein [Vibrio cholerae HC-39A1]
gi|408019658|gb|EKG57050.1| exonuclease family protein [Vibrio cholerae HC-52A1]
gi|408034206|gb|EKG70712.1| exonuclease family protein [Vibrio cholerae CP1040(13)]
gi|408034702|gb|EKG71189.1| exonuclease family protein [Vibrio cholerae HC-57A1]
gi|408043425|gb|EKG79421.1| exonuclease family protein [Vibrio Cholerae CP1044(17)]
gi|408044755|gb|EKG80647.1| exonuclease family protein [Vibrio cholerae CP1050(23)]
gi|408055399|gb|EKG90331.1| exonuclease family protein [Vibrio cholerae HC-81A2]
gi|408609942|gb|EKK83318.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|408638177|gb|EKL10125.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|408642893|gb|EKL14637.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|408656267|gb|EKL27364.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|408657542|gb|EKL28621.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|408846863|gb|EKL86942.1| exonuclease family protein [Vibrio cholerae HC-37A1]
gi|408848039|gb|EKL88094.1| exonuclease family protein [Vibrio cholerae HC-17A2]
gi|408871516|gb|EKM10753.1| exonuclease family protein [Vibrio cholerae HC-62B1]
gi|408879873|gb|EKM18816.1| exonuclease family protein [Vibrio cholerae HC-69A1]
gi|429225844|gb|EKY32042.1| hypothetical protein OSU_2328 [Vibrio cholerae PS15]
gi|439975222|gb|ELP51358.1| hypothetical protein VC4260B_10350 [Vibrio cholerae 4260B]
gi|443432196|gb|ELS74727.1| exonuclease family protein [Vibrio cholerae HC-64A1]
gi|443436398|gb|ELS82521.1| exonuclease family protein [Vibrio cholerae HC-65A1]
gi|443439667|gb|ELS89365.1| exonuclease family protein [Vibrio cholerae HC-67A1]
gi|443443689|gb|ELS96975.1| exonuclease family protein [Vibrio cholerae HC-68A1]
gi|443447894|gb|ELT04536.1| exonuclease family protein [Vibrio cholerae HC-71A1]
gi|443450286|gb|ELT10563.1| exonuclease family protein [Vibrio cholerae HC-72A2]
gi|443461737|gb|ELT32795.1| exonuclease family protein [Vibrio cholerae HC-80A1]
gi|443466278|gb|ELT40937.1| exonuclease family protein [Vibrio cholerae HC-81A1]
gi|448263960|gb|EMB01199.1| Hypothetical protein B839_22370 [Vibrio cholerae O1 str. Inaba
G4222]
Length = 176
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G++ Q +V+P +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L+E + ++N G N +A +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P F ++NL + R + A E G+ W+GR H G DA N A+ L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|260776120|ref|ZP_05885015.1| hypothetical protein VIC_001504 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607343|gb|EEX33608.1| hypothetical protein VIC_001504 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 176
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +++ EIIE + V G++ Q YV+P +++ S FC L
Sbjct: 6 IVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCSQL 64
Query: 197 TGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNW--DCRVMLESECRFKK 253
TGI ++++ G L E L IKN A +++W D R+ L EC+ K
Sbjct: 65 TGITPRKIEKQGRPLEEVL--------KSMIKNFGGANKIYASWGRDDRI-LAQECQDKG 115
Query: 254 IWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
I P F +INL + R K A E + W+GR H G DA N A+ LA
Sbjct: 116 IEMP--FKEFINLATLYRVQHRLKDKRIGHKAAQEAQNIEWEGRQHSGYVDAYNLAK-LA 172
Query: 312 LLM 314
L M
Sbjct: 173 LTM 175
>gi|417820797|ref|ZP_12467411.1| exonuclease family protein [Vibrio cholerae HE39]
gi|423952563|ref|ZP_17734277.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|340038428|gb|EGQ99402.1| exonuclease family protein [Vibrio cholerae HE39]
gi|408659997|gb|EKL31028.1| exonuclease family protein [Vibrio cholerae HE-40]
Length = 176
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G++ Q +V+P +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLTAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L+E + ++N G N +A +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P F ++NL + R + A E G+ W+GR H G DA N A+ L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|163816457|ref|ZP_02207821.1| hypothetical protein COPEUT_02646 [Coprococcus eutactus ATCC 27759]
gi|158448157|gb|EDP25152.1| exonuclease [Coprococcus eutactus ATCC 27759]
Length = 232
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 139 VVIDFEAT-----CDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+V+D E + ++ E+IE +V ++ ++ A F+ YV+P N+ +
Sbjct: 13 IVVDLEMNWLDFKYENERKISTNEVIEIGAVTMNEKFEEIGA-FKMYVKPQFNEKVVKKV 71
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+ LTGI ++ ++A KW + G + WS+ D + L E + K
Sbjct: 72 EKLTGITMDKLQDSPVFADAFDAFIKWCISFG---EEVVMYGWSDSD-ELQLRREMKLKN 127
Query: 254 I-WKP---PYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I WK F +W + + F ++ G G L +AV+ AG+ + G+ H DA+NTA
Sbjct: 128 IPWKEDVDKVFRQWHDFQKEFSDLVGIGRIITLSQAVDYAGIDFAGQKHDACCDARNTAY 187
Query: 309 LLAL 312
LLAL
Sbjct: 188 LLAL 191
>gi|291442766|ref|ZP_06582156.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291345661|gb|EFE72617.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 166
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 161 FPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKW 220
FP + VS G+ A + VRP +++ S C +LTG+ Q VD+G+ ++A +
Sbjct: 13 FPFLGVSP-GGERLAKHRLLVRPARSEV-SPLCTELTGLTQADVDQGLPFTKAC----RA 66
Query: 221 LENKGIKNTNFAVVTWSNWDC--RVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GV 277
L K + ++ W++W R +CR + P+ +R N+K F +G
Sbjct: 67 LAAK----HHTGLIPWASWGDYDRNQFTRQCRHTGT-QYPFNHRHTNVKAAFTTSYGLRR 121
Query: 278 RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR 316
R + A +AGL +GR H G DDA N A L+ LM R
Sbjct: 122 RPGMPRAPTVAGLPLEGRHHRGDDDAWNIAALVLDLMGR 160
>gi|258621526|ref|ZP_05716559.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258627541|ref|ZP_05722318.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|449146225|ref|ZP_21777016.1| hypothetical protein D908_15711 [Vibrio mimicus CAIM 602]
gi|258580123|gb|EEW05095.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258586144|gb|EEW10860.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|449078163|gb|EMB49106.1| hypothetical protein D908_15711 [Vibrio mimicus CAIM 602]
Length = 176
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G++ Q +V+P +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLSAGKIVKRAQYFVKPEKDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L E L ++N G N +A +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLVEVL---QSMVKNFGGSNKIYA--SWGRDD--LILINECREK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F ++NL + R + A E G+ W+GR H G DA N A+ L
Sbjct: 115 GI--PVPFQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|149068096|gb|EDM17648.1| rCG39336, isoform CRA_a [Rattus norvegicus]
gi|149068097|gb|EDM17649.1| rCG39336, isoform CRA_a [Rattus norvegicus]
gi|149068098|gb|EDM17650.1| rCG39336, isoform CRA_a [Rattus norvegicus]
Length = 99
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 133 QEFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 191
Q + Y +V+DFE+TC + K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 192 F 192
F
Sbjct: 92 F 92
>gi|398928564|ref|ZP_10663543.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398168162|gb|EJM56184.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 109
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 135 FQYFVVIDFEATCDKDKN----------PYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
++Y +D EATCD+ P E IE V++ T ++ + FQ +VRP
Sbjct: 20 YRYLYCVDLEATCDEVGESESSRPLAVVPAQMETIEIGLVVIDLETLEIVSEFQRFVRPL 79
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSE 212
L+DFCK+LT IQQ VD T E
Sbjct: 80 ITPTLTDFCKELTSIQQTDVDSSGTYVE 107
>gi|160932735|ref|ZP_02080124.1| hypothetical protein CLOLEP_01576 [Clostridium leptum DSM 753]
gi|156867809|gb|EDO61181.1| exonuclease [Clostridium leptum DSM 753]
Length = 293
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 138 FVVIDFE--ATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
FV++D E T K K+ + EIIEF +V V+ +E F V+P + LS K+
Sbjct: 3 FVILDLEWNGTYSKRKSGFFNEIIEFGAVKVNDRLC-VEDTFSVVVKPQIGKKLSSKVKN 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT I ++ GVT + A+ + K+L N ++TW D ++E+ +
Sbjct: 62 LTNISSEELGLGVTYTRAVSKFKKFLGNA-------VLMTWGTSDILALMENHQYYWGTD 114
Query: 256 KPPYFNRWINL-----KVPFHEVFGGVRCNLKEAVEMAGLAWQGRA-HCGLDDAKNTARL 309
+ Y ++NL + ++E G + L A ++ G+ QG H LDD+ L
Sbjct: 115 RLDYIEGYVNLQSFCERRVYYER--GKQMGLSTAAQLLGIDVQGMEHHRALDDS-----L 167
Query: 310 LALLMHR 316
LAL R
Sbjct: 168 LALACFR 174
>gi|406607282|emb|CCH41337.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 655
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
++VI TCD++ + EIIE +++ + T Q + +RP N ++ C
Sbjct: 5 YIVIHLSTTCDENGVYVSKDSAEIIEIAWILLDANTLQEISSDSILIRP-LNTPITALCT 63
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+LT + V T +A+L+ D ++ +N K +F VT + WD RV L E R K
Sbjct: 64 NLTTLTWEHVRNAGTFKDAILKLDSFIHDNITSKQLDFTFVTLNAWDLRVQLPREARDKN 123
Query: 254 IWKPPYF--NRWINLK 267
+ PPY +R +LK
Sbjct: 124 VVLPPYLQHSRCFDLK 139
>gi|149189379|ref|ZP_01867664.1| hypothetical protein VSAK1_25975 [Vibrio shilonii AK1]
gi|148836737|gb|EDL53689.1| hypothetical protein VSAK1_25975 [Vibrio shilonii AK1]
Length = 176
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C + D EIIE + V ++ Q YV+P +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNVDGVGTTGEIIEVGLAEIDLVKQEVVKRAQYYVKPETDKV-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI +V++ G L+ + ++N G N +A +W D ++L EC+ K
Sbjct: 62 TELTGITPRKVEKQGRPLASVI---QSMVKNFGGPNKIYA--SWGRDD--IILLEECQSK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F ++NL + R K A E G+ W+GR H G DA N A+ L
Sbjct: 115 GIEMP--FKEFVNLATLYRIQNRLKDKRIGHKAAQESQGIEWEGRQHSGYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|354557639|ref|ZP_08976897.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
metallireducens DSM 15288]
gi|353550433|gb|EHC19870.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
metallireducens DSM 15288]
Length = 210
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 138 FVVIDFEATC----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F+V+DFE + K + +P EIIE +V+ S+ + + +V+P L++
Sbjct: 4 FLVVDFEFSVPRAYGKPRAWFP-EIIEVGAVLSDSLGNPTDQTYSAFVKPRIWTRLAEES 62
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+TGI+Q +D GV + +L K +K + +V W + D R +L + C
Sbjct: 63 YAITGIRQADIDGGVDIEASLNILQKMSPDK-----DTWLVAWGDAD-RKVLGNVCEKYS 116
Query: 254 IWKPPYFNRWINLKVPFHEVFGGV--RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ P ++ +++L + ++F + + +LK A+E + G H LDDA N A+++A
Sbjct: 117 LDYPFAWDNYLDLAEEY-KIFCKLDRKASLKRAIEENEIPQIGILHSALDDAINAAQVMA 175
Query: 312 LLMHRGF 318
+M G+
Sbjct: 176 WMMKNGW 182
>gi|398818896|ref|ZP_10577475.1| DNA polymerase III, alpha subunit (gram-positive type)
[Brevibacillus sp. BC25]
gi|398026772|gb|EJL20348.1| DNA polymerase III, alpha subunit (gram-positive type)
[Brevibacillus sp. BC25]
Length = 239
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+V D E T K+ P EIIE + +V G FQ Y P + +++ +
Sbjct: 3 IIVFDLETTLTYQKDKIP-EIIEIGAAKVVPGKNGVEVDTFQRYTFPAIERRITERTRKF 61
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
G+ + + + A +W+ ++ + + TW D R+M+E RF +
Sbjct: 62 IGLDKENMPTFIPFRRAFAEFMEWIGT----DSEYFLCTWGQDDKRLMIEHCARFGLDFN 117
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + +++ P + + +LKEA++ AG+ +GR H L DA +TA LL
Sbjct: 118 --WMRNYNDIQPPISMLLADRKQMSLKEAIDTAGIIQEGRLHSALVDAIHTAHLL 170
>gi|424660198|ref|ZP_18097445.1| exonuclease family protein [Vibrio cholerae HE-16]
gi|408050883|gb|EKG86011.1| exonuclease family protein [Vibrio cholerae HE-16]
Length = 156
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q +V+P +++ S FC +LTGI ++++ G L+E +
Sbjct: 6 EIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVI- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D ++L +ECR K + P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYIDAYNLAK-LALTM 155
>gi|423982214|ref|ZP_17738059.1| exonuclease family protein [Vibrio cholerae HE-46]
gi|408665214|gb|EKL36033.1| exonuclease family protein [Vibrio cholerae HE-46]
Length = 156
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q +V+P +++ S FC +LTGI ++++ G L+E +
Sbjct: 6 EIIEIGLAEIDLTAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVI- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D ++L +ECR K + P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|255745763|ref|ZP_05419711.1| hypothetical protein VCH_002127 [Vibrio cholera CIRS 101]
gi|262158958|ref|ZP_06030070.1| hypothetical protein VIG_002197 [Vibrio cholerae INDRE 91/1]
gi|262169319|ref|ZP_06037011.1| hypothetical protein VIJ_002539 [Vibrio cholerae RC27]
gi|262192375|ref|ZP_06050528.1| hypothetical protein VIH_002769 [Vibrio cholerae CT 5369-93]
gi|417824441|ref|ZP_12471032.1| exonuclease family protein [Vibrio cholerae HE48]
gi|418332406|ref|ZP_12943340.1| exonuclease family protein [Vibrio cholerae HC-06A1]
gi|418348817|ref|ZP_12953551.1| exonuclease family protein [Vibrio cholerae HC-43A1]
gi|419829940|ref|ZP_14353426.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|419832913|ref|ZP_14356375.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|419836236|ref|ZP_14359679.1| exonuclease family protein [Vibrio cholerae HC-46B1]
gi|421320984|ref|ZP_15771541.1| exonuclease family protein [Vibrio cholerae CP1038(11)]
gi|421324979|ref|ZP_15775505.1| exonuclease family protein [Vibrio cholerae CP1041(14)]
gi|421335234|ref|ZP_15785701.1| exonuclease family protein [Vibrio cholerae CP1048(21)]
gi|421339128|ref|ZP_15789563.1| exonuclease family protein [Vibrio cholerae HC-20A2]
gi|421342559|ref|ZP_15792964.1| exonuclease family protein [Vibrio cholerae HC-43B1]
gi|421351143|ref|ZP_15801508.1| exonuclease family protein [Vibrio cholerae HE-25]
gi|422307224|ref|ZP_16394390.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|422917127|ref|ZP_16951455.1| exonuclease family protein [Vibrio cholerae HC-02A1]
gi|423153451|ref|ZP_17140645.1| exonuclease family protein [Vibrio cholerae HC-22A1]
gi|423730942|ref|ZP_17704256.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|423735135|ref|ZP_17708343.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|423819800|ref|ZP_17716058.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|423853132|ref|ZP_17719850.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|423997543|ref|ZP_17740802.1| exonuclease family protein [Vibrio cholerae HC-02C1]
gi|424009067|ref|ZP_17752013.1| exonuclease family protein [Vibrio cholerae HC-44C1]
gi|424016250|ref|ZP_17756091.1| exonuclease family protein [Vibrio cholerae HC-55B2]
gi|424019191|ref|ZP_17758987.1| exonuclease family protein [Vibrio cholerae HC-59B1]
gi|424590873|ref|ZP_18030308.1| exonuclease family protein [Vibrio cholerae CP1037(10)]
gi|424613188|ref|ZP_18051991.1| exonuclease family protein [Vibrio cholerae HC-41A1]
gi|424621955|ref|ZP_18060478.1| exonuclease family protein [Vibrio cholerae HC-47A1]
gi|424624733|ref|ZP_18063205.1| exonuclease family protein [Vibrio cholerae HC-50A1]
gi|424629236|ref|ZP_18067533.1| exonuclease family protein [Vibrio cholerae HC-51A1]
gi|424636357|ref|ZP_18074372.1| exonuclease family protein [Vibrio cholerae HC-55A1]
gi|424640294|ref|ZP_18078184.1| exonuclease family protein [Vibrio cholerae HC-56A1]
gi|424644928|ref|ZP_18082676.1| exonuclease family protein [Vibrio cholerae HC-56A2]
gi|443527152|ref|ZP_21093217.1| exonuclease family protein [Vibrio cholerae HC-78A1]
gi|443531346|ref|ZP_21097361.1| exonuclease family protein [Vibrio cholerae HC-7A1]
gi|255736838|gb|EET92235.1| hypothetical protein VCH_002127 [Vibrio cholera CIRS 101]
gi|262022132|gb|EEY40841.1| hypothetical protein VIJ_002539 [Vibrio cholerae RC27]
gi|262029143|gb|EEY47795.1| hypothetical protein VIG_002197 [Vibrio cholerae INDRE 91/1]
gi|262031728|gb|EEY50313.1| hypothetical protein VIH_002769 [Vibrio cholerae CT 5369-93]
gi|340048126|gb|EGR09049.1| exonuclease family protein [Vibrio cholerae HE48]
gi|341638520|gb|EGS63167.1| exonuclease family protein [Vibrio cholerae HC-02A1]
gi|356419217|gb|EHH72775.1| exonuclease family protein [Vibrio cholerae HC-06A1]
gi|356431667|gb|EHH84871.1| exonuclease family protein [Vibrio cholerae HC-22A1]
gi|356447556|gb|EHI00347.1| exonuclease family protein [Vibrio cholerae HC-43A1]
gi|395920649|gb|EJH31471.1| exonuclease family protein [Vibrio cholerae CP1041(14)]
gi|395923966|gb|EJH34777.1| exonuclease family protein [Vibrio cholerae CP1038(11)]
gi|395937095|gb|EJH47818.1| exonuclease family protein [Vibrio cholerae CP1048(21)]
gi|395943076|gb|EJH53751.1| exonuclease family protein [Vibrio cholerae HC-43B1]
gi|395944076|gb|EJH54750.1| exonuclease family protein [Vibrio cholerae HC-20A2]
gi|395951588|gb|EJH62202.1| exonuclease family protein [Vibrio cholerae HE-25]
gi|395960300|gb|EJH70675.1| exonuclease family protein [Vibrio cholerae HC-56A2]
gi|395972139|gb|EJH81750.1| exonuclease family protein [Vibrio cholerae HC-47A1]
gi|408014090|gb|EKG51766.1| exonuclease family protein [Vibrio cholerae HC-50A1]
gi|408014564|gb|EKG52198.1| exonuclease family protein [Vibrio cholerae HC-41A1]
gi|408024793|gb|EKG61881.1| exonuclease family protein [Vibrio cholerae HC-56A1]
gi|408025321|gb|EKG62380.1| exonuclease family protein [Vibrio cholerae HC-55A1]
gi|408033841|gb|EKG70359.1| exonuclease family protein [Vibrio cholerae CP1037(10)]
gi|408057068|gb|EKG91934.1| exonuclease family protein [Vibrio cholerae HC-51A1]
gi|408621525|gb|EKK94528.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|408622618|gb|EKK95594.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|408625330|gb|EKK98243.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|408630304|gb|EKL02915.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|408635733|gb|EKL07919.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|408643101|gb|EKL14840.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|408651557|gb|EKL22813.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|408853475|gb|EKL93268.1| exonuclease family protein [Vibrio cholerae HC-02C1]
gi|408858101|gb|EKL97780.1| exonuclease family protein [Vibrio cholerae HC-46B1]
gi|408861050|gb|EKM00649.1| exonuclease family protein [Vibrio cholerae HC-55B2]
gi|408864717|gb|EKM04135.1| exonuclease family protein [Vibrio cholerae HC-44C1]
gi|408868686|gb|EKM08006.1| exonuclease family protein [Vibrio cholerae HC-59B1]
gi|443454558|gb|ELT18360.1| exonuclease family protein [Vibrio cholerae HC-78A1]
gi|443458429|gb|ELT25825.1| exonuclease family protein [Vibrio cholerae HC-7A1]
Length = 156
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q +V+P +++ S FC +LTGI ++++ G L+E +
Sbjct: 6 EIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVI- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D ++L +ECR K + P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|242092960|ref|XP_002436970.1| hypothetical protein SORBIDRAFT_10g012821 [Sorghum bicolor]
gi|241915193|gb|EER88337.1| hypothetical protein SORBIDRAFT_10g012821 [Sorghum bicolor]
Length = 227
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 57/227 (25%)
Query: 130 FQPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC--NQ 187
F+PQ+ +YF+++D E EI+EFP V++ + + + F +VRPT Q
Sbjct: 45 FKPQKLEYFLILDLEGRV---------EILEFPVVMIDAQSTEFIDSFHRFVRPTAMSEQ 95
Query: 188 LLSDFCKDLT---GIQQIQVDRGVTLSEALLRHDKWLEN-------KGIKNTNFAVVTWS 237
+++ + G+ ++ D V E L + WL N +G A VT
Sbjct: 96 RTTEYIEGKYGKFGVDRVWHDTAVPFKEVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCG 155
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 297
NWD + + + P G H
Sbjct: 156 NWDLKTKATGMMTMMRELQLPII---------------------------------GNHH 182
Query: 298 CGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERI 344
G+DD+KN AR++ ++ G IT Q+ G++ + F +RI
Sbjct: 183 LGIDDSKNIARVVQRMIADGAVIEITAK--RQSTTGNVKF-LFKDRI 226
>gi|149179996|ref|ZP_01858501.1| exonuclease [Bacillus sp. SG-1]
gi|148852188|gb|EDL66333.1| exonuclease [Bacillus sp. SG-1]
Length = 307
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 134 EFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
E + F+ DFE CD Y E I +V T + F Y++P + LSDF
Sbjct: 3 ELKQFIFFDFEMKCDDRGMAYENMEAIRLGAVKYDLKTKSI-TQFDRYIQPATQEPLSDF 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD-CRVMLESECR- 250
CK LTGI ++ W+ G+K + F +WS D R+ ++S
Sbjct: 62 CKKLTGINDRDLETADPFPLVFKEFLYWV--GGVKKSRF--FSWSKSDMSRLKMDSALHG 117
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ +R+++ + F + +++ A+ + GL ++G H + DA NT L
Sbjct: 118 LPSVTIDKIQSRYVDFQQTFTQRVSKDNLSVENALALYGLHFEGEPHNPMYDAYNT---L 174
Query: 311 ALLMH 315
+ MH
Sbjct: 175 QIFMH 179
>gi|262403997|ref|ZP_06080552.1| hypothetical protein VOA_001985 [Vibrio sp. RC586]
gi|262349029|gb|EEY98167.1| hypothetical protein VOA_001985 [Vibrio sp. RC586]
Length = 156
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G + Q +V+P +++ S FC +LTGI ++++ G L+E L
Sbjct: 6 EIIEVGLAEIDLSAGTIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVL- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D R+++ +ECR K I P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGR-DDRILI-NECREKGI--PVPFQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|262165616|ref|ZP_06033353.1| hypothetical protein VMA_002063 [Vibrio mimicus VM223]
gi|262171593|ref|ZP_06039271.1| hypothetical protein VII_002415 [Vibrio mimicus MB-451]
gi|424810199|ref|ZP_18235562.1| hypothetical protein SX4_0820 [Vibrio mimicus SX-4]
gi|261892669|gb|EEY38655.1| hypothetical protein VII_002415 [Vibrio mimicus MB-451]
gi|262025332|gb|EEY44000.1| hypothetical protein VMA_002063 [Vibrio mimicus VM223]
gi|342322570|gb|EGU18359.1| hypothetical protein SX4_0820 [Vibrio mimicus SX-4]
Length = 156
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q +V+P +++ S FC +LTGI ++++ G L E L
Sbjct: 6 EIIEVGLAEIDLSAGKIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLVEVL- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D ++L +ECR K I P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGRDD--LILINECREKGI--PVPFQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|300119688|ref|ZP_07057228.1| sporulation inhibitor KapD [Bacillus cereus SJ1]
gi|298722916|gb|EFI63818.1| sporulation inhibitor KapD [Bacillus cereus SJ1]
Length = 158
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 181 VRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWD 240
+RP L+D CK GI+Q VD+G++ E + + ++ K K T +VTW N D
Sbjct: 1 MRPKTFPSLTDRCKKFLGIKQEVVDKGISFLELVEKLAEY--EKKCKPT---IVTWGNMD 55
Query: 241 CRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCG 299
+V L+ C ++ P+ + +L + + + FG + L +A+E G G+ HC
Sbjct: 56 MKV-LKHNCEKAEV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCA 113
Query: 300 LDDAKNTARLLALL 313
LDDA T + L+
Sbjct: 114 LDDAMTTYNIFKLV 127
>gi|209695293|ref|YP_002263222.1| exonuclease [Aliivibrio salmonicida LFI1238]
gi|208009245|emb|CAQ79508.1| putative exonuclease [Aliivibrio salmonicida LFI1238]
Length = 184
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
F V D E C +++ EIIE + TG++ Q YV+P +++ S FC
Sbjct: 11 FNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKPDEDEI-SLFC 69
Query: 194 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
+LTGI ++++ E +L+ ++N G TN W + + ++L+SEC K
Sbjct: 70 VELTGITPRKIEKQGRPLEGVLK--SMIKNFG--GTNKIYAAWGHDE--LILKSECEAKG 123
Query: 254 IWKPPYFNRWINLKVPFH--EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I P F +INL + R + A+E + W+GR H G DA N A+L
Sbjct: 124 IEFP--FVEFINLATLYRIKSRKKNDRMGQRRAMEELHIEWEGRQHSGYVDAYNLAQL 179
>gi|384485560|gb|EIE77740.1| hypothetical protein RO3G_02444 [Rhizopus delemar RA 99-880]
Length = 567
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 135 FQYFVVIDFEATCDKDK-NPYP-------QEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
F +V+ EATCD++ NP EIIE V++ + ++ Q YV+P
Sbjct: 77 FDRLIVLHVEATCDENTTNPAAVQVTKENSEIIELAFVVLDAHNLKVLHKKQIYVKPE-R 135
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
L+ FC ++TGIQ ++ TL A+ D+++ +N + +F VT W R+ L
Sbjct: 136 TTLTPFCTEVTGIQWSSLENAGTLKGAIDELDQYIQQNIEEEKKSFCFVTHGGWVLRIQL 195
Query: 246 ESECRFKKIWKPPY--FNRWINLK 267
E R K I P Y + R +LK
Sbjct: 196 PRESRDKNIELPNYLAYCRMFDLK 219
>gi|229523521|ref|ZP_04412926.1| hypothetical protein VCA_001085 [Vibrio cholerae bv. albensis
VL426]
gi|229337102|gb|EEO02119.1| hypothetical protein VCA_001085 [Vibrio cholerae bv. albensis
VL426]
Length = 176
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G++ Q +V+P +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L+E + ++N G N +A +W D ++L +EC+ K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECQEK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P F ++NL + R + A E G+ W+GR H G DA N A+ L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYIDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|148978953|ref|ZP_01815243.1| hypothetical protein VSWAT3_05721 [Vibrionales bacterium SWAT-3]
gi|145962042|gb|EDK27329.1| hypothetical protein VSWAT3_05721 [Vibrionales bacterium SWAT-3]
Length = 176
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + +G + Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSENGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SQFCAEL 64
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI ++++ E++++ ++N G N +A W D ++L EC+ K I +
Sbjct: 65 TGITPRKIEKQGRPLESVIK--SMIKNFGGPNKIYA--AWGRDD--LILHKECQEKGI-E 117
Query: 257 PPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
PP F+ +IN+ + R + A E + W+GR H G DA N A+ LAL M
Sbjct: 118 PP-FSEFINIATLYRVQNRLKDKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAK-LALTM 175
>gi|268577631|ref|XP_002643798.1| Hypothetical protein CBG02010 [Caenorhabditis briggsae]
Length = 334
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE--ACFQTYVRPTCNQLLSDF 192
FQ V++ + T + +P E+I+ +V+V + F YV P N L++
Sbjct: 43 FQNLVILKVKTTSQEKNYDFPSEVIQISAVVVDVKNNAIRENMMFNEYVMPVINSKLTEN 102
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
C TG+ Q V+ + + WLE+ + A V S D L+ +C
Sbjct: 103 CVKTTGVTQENVNNARSFRIVNEKFSNWLESNQLVGVKSAFVMDSRVDIWQRLQYQCALI 162
Query: 253 KIWKPPYFNRWINL 266
+ P F +WINL
Sbjct: 163 GVRMPARFRQWINL 176
>gi|89097554|ref|ZP_01170443.1| exonuclease [Bacillus sp. NRRL B-14911]
gi|89087850|gb|EAR66962.1| exonuclease [Bacillus sp. NRRL B-14911]
Length = 320
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
E +V DFE C + E I +V +T +L + F Y++P ++ LS F
Sbjct: 3 ELTQYVFFDFEMLCSNKGMLFEDMEAIRLGAVKYDLITEKL-SFFDEYIKPENHKPLSMF 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
CK LTGI+ + ++ W+ G+K T F +WS D + R
Sbjct: 62 CKRLTGIEDKDLRDADRFADVFSTFLYWV--NGVKKTRF--YSWSKSDLSRLNADAARH- 116
Query: 253 KIWKPPYFNRWINLK-VPFHEVFGGVRCN----LKEAVEMAGLAWQGRAHCGLDDAKNTA 307
P IN + V F EVF N ++ A+ + GL + G H + D+ NT
Sbjct: 117 --GIPSATIEKINSRYVDFQEVFSNRAANNTPSVENALALYGLDFVGETHNPMFDSYNTL 174
Query: 308 RLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLH-KQMDLDGSEAWTKT 366
R+ F F + LT ER LP L Q++++ + K
Sbjct: 175 RIF-------FAFE---------RNPQLTEKIMAERFILPGRTLTVDQINVEVKSQFAKD 218
Query: 367 RECFL----WVWKL 376
E F W++K+
Sbjct: 219 MEEFFSSLQWIYKM 232
>gi|375307349|ref|ZP_09772638.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus sp. Aloe-11]
gi|375080694|gb|EHS58913.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus sp. Aloe-11]
Length = 223
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEA-CFQTYVRPTCNQLLSDFCKD 195
+++ D E T ++ Y EII+ +V +V G A F ++VRP+ +LS
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLSTDTVQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q +D EA+ + WL ++ + + W D R L S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVEQFVAWLGT----DSPYYLCAWGP-DDRQKLVSHCRTHHV- 115
Query: 256 KPPYFNRWINLKVPFHEVFGGV----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + +++ +FG + +L +A+E+ + + G+ H LDDA NTA++
Sbjct: 116 DLGWIHNTNDIQKQISRLFGSSGKYRQLSLSQALELCHIDFDGQQHRALDDAINTAQVFM 175
Query: 312 LLMHR 316
L R
Sbjct: 176 HLFDR 180
>gi|417951741|ref|ZP_12594829.1| hypothetical protein VISP3789_18966 [Vibrio splendidus ATCC 33789]
gi|342803961|gb|EGU39302.1| hypothetical protein VISP3789_18966 [Vibrio splendidus ATCC 33789]
Length = 176
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + +G + Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSENGVGTTGEIIEAGLAEIDLASGTIVKRAQYYVKPEKDEV-SQFCAEL 64
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI ++++ E++++ ++N G N +A W D ++L EC+ K I +
Sbjct: 65 TGITPRKIEKQGRPLESVIK--SMIKNFGGPNKIYA--AWGRDD--LILHKECQEKGI-E 117
Query: 257 PPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
PP F+ +IN+ + R + A E + W+GR H G DA N A+ LAL M
Sbjct: 118 PP-FSEFINIATLYRVQNRLKDKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAK-LALTM 175
>gi|422622899|ref|ZP_16690918.1| exonuclease, partial [Pseudomonas syringae pv. pisi str. 1704B]
gi|330946499|gb|EGH47535.1| exonuclease [Pseudomonas syringae pv. pisi str. 1704B]
Length = 137
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 137 YFVVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++VID EAT ++ P + E+IE + +V+ +L+ F+ +VRP LL+ FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDH-FERFVRPARRPLLTHFCRE 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVM 244
LT I Q +D L+ + ++WL + + +V W++W ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRAR-----IVGWASWGTTIV 105
>gi|149280749|ref|ZP_01886857.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
gi|149228496|gb|EDM33907.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
Length = 181
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 138 FVVIDFEATCDKDKNPYPQE--IIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+++D EATC + NP E IIE +++ TG++ V+P +++ +FC
Sbjct: 8 ILIVDIEATCWEGSNPDGMENDIIEIGIALLNVQTGEISENRGILVKPERSEV-GEFCTK 66
Query: 196 LTGIQ-QIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT I Q+ +D GVT EA + K + N A ++ +D + + +C I
Sbjct: 67 LTTITPQMIIDDGVTFREAC-----SILKKEYSSQNRAWASFGAYDLK-QFQRQCAAYNI 120
Query: 255 WKPPYFNRWINLKVPFHEVFGGVRCNLKE------AVEMAGLAWQGRAHCGLDDAKNTAR 308
P + +N+K F ++ L + A+EM + +G H G+DDAKN A+
Sbjct: 121 GYP-FGPSHVNVKTLF-----ALKKRLSQEQGMSGALEMLNIPLEGTHHRGVDDAKNIAK 174
Query: 309 LL 310
+L
Sbjct: 175 IL 176
>gi|148685236|gb|EDL17183.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
gi|148685237|gb|EDL17184.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
gi|148685238|gb|EDL17185.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
Length = 90
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 133 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
Q + Y +V+DFE+TC D K+ EIIEFP+V++++ TG++E+ F YV+P+
Sbjct: 32 QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPS 84
>gi|261210895|ref|ZP_05925185.1| hypothetical protein VCJ_001149 [Vibrio sp. RC341]
gi|260839870|gb|EEX66470.1| hypothetical protein VCJ_001149 [Vibrio sp. RC341]
Length = 156
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q +V+P +++ S FC +LTGI ++++ G L+E L
Sbjct: 6 EIIEVGLAEIDLSAGKIVKRAQYFVKPEHDEI-SLFCAELTGITPRKIEKQGRPLAEVL- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G N +A +W D R+++ EC+ K I P F ++NL +
Sbjct: 64 --QSMVKNFGGSNKIYA--SWGR-DDRILIH-ECQEKGI--PVPFQEFLNLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|295704562|ref|YP_003597637.1| exonuclease family protein [Bacillus megaterium DSM 319]
gi|294802221|gb|ADF39287.1| exonuclease family protein [Bacillus megaterium DSM 319]
Length = 311
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 138 FVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
F+ DFE C P+ E I +V + T +E F Y++PT + LS FC +L
Sbjct: 7 FIFFDFEMLCSNKGMPFEDMEAIRLGAVKYNIETENIE-FFDRYIQPTKSVSLSRFCTEL 65
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC-RVMLESE------C 249
TGI+ + W+ GIK + F +WS D R +++E
Sbjct: 66 TGIKDTDLVGASNFKNVFEDFLTWI--GGIKKSRF--FSWSTSDLSRFKIDAEKHEISLA 121
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
KKI + R+++ + F + +++ + + L ++G+ H + DA NT R+
Sbjct: 122 TIKKIEQ-----RYVDFQAIFTKRVSKNNVSVENGLALYNLQFEGKKHNPMYDAYNTLRI 176
Query: 310 LALLMH 315
+H
Sbjct: 177 YLSFLH 182
>gi|422593907|ref|ZP_16668199.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330984216|gb|EGH82319.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 222
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 135 FQYFVVIDFEATC--------DKDKNPYP-------QEIIEFPSVIVSS-VTGQLEACFQ 178
++Y + +D EATC D++ YP E IE +V+V + + A F
Sbjct: 20 YRYLLCVDLEATCNEIPEGLSDEEARSYPGAVPVDEMETIEVGAVVVDTWNQDSVVAEFC 79
Query: 179 TYVRPTCNQLLSDFCKDLTGIQQIQVDRG---VTLSEALLRHDKWLENKGIKNTNFAVVT 235
++V+P + L+ FC +LT I Q VD+ ++S+AL + +LE + +
Sbjct: 80 SFVKPVLHPQLTPFCVNLTTITQSDVDQAEDYCSVSKAL---EGFLEP--FRADGIMWGS 134
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W ++D + + + R + NLK + LK AV GL W G
Sbjct: 135 WGSYDLKQLEQDAARHRCKAMLSDLEH-TNLKKWHWKALNCRAMGLKNAVLDLGLDWVGT 193
Query: 296 AHCGLDDAKNTARLLALL 313
H G+DDA+N A ++ L
Sbjct: 194 YHRGIDDARNVASVVRKL 211
>gi|423550768|ref|ZP_17527095.1| hypothetical protein IGW_01399 [Bacillus cereus ISP3191]
gi|401189152|gb|EJQ96212.1| hypothetical protein IGW_01399 [Bacillus cereus ISP3191]
Length = 279
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+LK + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLKKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|319653072|ref|ZP_08007175.1| hypothetical protein HMPREF1013_03790 [Bacillus sp. 2_A_57_CT2]
gi|317395244|gb|EFV75979.1| hypothetical protein HMPREF1013_03790 [Bacillus sp. 2_A_57_CT2]
Length = 309
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 134 EFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
E + + DFE C K+ + E I +V V TG++ F ++RP + LS F
Sbjct: 3 ELKQLIFFDFEMLCSKNGMLFEDMEAIRLGAVKVELETGKVTG-FDRFIRPQQDSPLSPF 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-- 250
CK+LTGI + SE W+ G+K F +WS D + R
Sbjct: 62 CKELTGISDSDLKTADDFSEVFKDFLFWV--GGVKKARF--YSWSTSDILRLKADAFRHN 117
Query: 251 -----FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 305
KI K R+++ + F + ++++A+ L++ G H + DA N
Sbjct: 118 LPQATIDKITK-----RYVDFQAIFTKRASRTAASVEKALSFYDLSFIGEPHHPMYDAYN 172
Query: 306 TARL 309
T R+
Sbjct: 173 TLRI 176
>gi|334133474|ref|ZP_08507026.1| exonuclease [Paenibacillus sp. HGF7]
gi|333609031|gb|EGL20311.1| exonuclease [Paenibacillus sp. HGF7]
Length = 222
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQ--LEACFQTYVRPTCNQLLSDFCKD 195
+V D E T + K + EIIE + V G+ + FQ++V+P + ++S +
Sbjct: 3 VIVYDLEMTVTR-KKIHVSEIIEIGAAAVEITDGKPAVTGTFQSFVKPDRSPVISASTQA 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI+Q ++ L R +W I + ++ + W D + L S+CR +
Sbjct: 62 LTGIKQSELQSAEPWPLVLERLLEW-----IGDGDYYLCAWGPDDL-IQLGSDCRMHGV- 114
Query: 256 KPPYFNRWINLKVPFHEVFGGV-------RCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
WI ++ G+ + LK A+E + + G H LDDA NTA+
Sbjct: 115 ----KTDWICNHNNLQKLMAGLVQQEKQQQMGLKTALEYWNIPFDGSHHRALDDAMNTAK 170
Query: 309 LLALLMHR 316
L L R
Sbjct: 171 LFIHLHDR 178
>gi|317128745|ref|YP_004095027.1| exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
gi|315473693|gb|ADU30296.1| Exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
Length = 312
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 134 EFQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ + ++ DFE C +K+ + E I +V + + + F +++P ++ LS F
Sbjct: 3 QIKQYIFFDFEMLCSNKNMSFREMEAIRLGAV-KYDIESETVSTFDHFIKPINDEPLSAF 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC-RVMLESECR- 250
CK+LT I + + + +W+ G+K + F +WS D R++++S+
Sbjct: 62 CKNLTRISEENLKNAKSFPVVFADFLRWI--GGVKKSRF--FSWSKSDLSRLIIDSKTHH 117
Query: 251 --FKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
I+K R+I+ + F + +++ A+++ L+++G+ H +DDA NT R
Sbjct: 118 IPLSTIYKIK--KRYIDFQAIFSKRVSKNTPSVENALKLYELSFKGQLHNPVDDAYNTLR 175
Query: 309 LLALLMHRGFK 319
+ ++ K
Sbjct: 176 IYLSFLNEPLK 186
>gi|301055024|ref|YP_003793235.1| exonuclease [Bacillus cereus biovar anthracis str. CI]
gi|300377193|gb|ADK06097.1| exonuclease, RNase T and DNA polymerase III [Bacillus cereus biovar
anthracis str. CI]
Length = 281
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + GV ++ +K+++ G N VTW D R L +C +
Sbjct: 64 TGITKKDLI-GVEKFPQII--EKFVQFIG---ENSIFVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 257 PPY-FNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PRMDKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|430749731|ref|YP_007212639.1| exonuclease [Thermobacillus composti KWC4]
gi|430733696|gb|AGA57641.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Thermobacillus composti KWC4]
Length = 248
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
++V++D E K + P E+IE +V + Q F ++P L+ F ++
Sbjct: 2 HYVILDIEFNGRKFASDLPMEVIEIGAVRLDDKLQQ-TGTFTALIKPVYFAKLNKFIREK 60
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC-RVMLESECRF--KK 253
TGI Q ++DR + + +WL +F +VTW D R++L++
Sbjct: 61 TGITQEEIDRAGRFPDVIASFIRWLG----PPDSFLLVTWGGEDLKRIVLDTRMHRLDDS 116
Query: 254 IWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
W + + + H++ V +++ A+EM GL AH L DA TA + L
Sbjct: 117 FWLAVRYYDLLKGFLRVHDLKSDV--SVERALEMLGLPAGEHAHRALGDAVMTAGIFRTL 174
Query: 314 MHR 316
R
Sbjct: 175 HDR 177
>gi|163753213|ref|ZP_02160337.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
gi|161326945|gb|EDP98270.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
Length = 183
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 138 FVVIDFEATCDKDKNPYPQ---EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+V+D EATC + Y + EIIE + +G++ V P +++ S FC
Sbjct: 7 ILVVDLEATCWEQDGEYQRNHSEIIEIGICELDVPSGKISKQQGILVIPEHSEI-SRFCT 65
Query: 195 DLTGIQ-QIQVDRGVTLSEAL-LRHDKWLENKGIKNTNFAVVTWSNWDC--RVMLESECR 250
+LT I ++ GV+ +A+ + D++ + + TW+++ R + ECR
Sbjct: 66 ELTSITPEMVAQDGVSFEDAIDILFDEY---------DSSAYTWASYGAYDRNKVMEECR 116
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVRCN-------LKEAVEMAGLAWQGRAHCGLDDA 303
K++ P+ ++ IN+K F RCN + A++ + +GR H G+DDA
Sbjct: 117 KKQV-DFPFGDQHINVKEEFK------RCNRMRRGIGMARALKQLRIPLEGRHHRGVDDA 169
Query: 304 KNTARLL 310
NTA++L
Sbjct: 170 NNTAKIL 176
>gi|225865501|ref|YP_002750879.1| exonuclease family protein [Bacillus cereus 03BB102]
gi|225791033|gb|ACO31250.1| exonuclease family protein [Bacillus cereus 03BB102]
Length = 281
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E + G + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFI---------GFIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|337750893|ref|YP_004645055.1| hypothetical protein KNP414_06666 [Paenibacillus mucilaginosus
KNP414]
gi|336302082|gb|AEI45185.1| hypothetical protein KNP414_06666 [Paenibacillus mucilaginosus
KNP414]
Length = 221
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSV--TGQLEACFQTYVRPTCNQLLSDFCKD 195
+++ D E T + ++ EIIE +V V T + FQT+V+PT L+
Sbjct: 3 YIIYDLEFTVQRKQHQIA-EIIEIGAVRVKETDGTAAIVDTFQTFVKPTKQPTLTPSTVS 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES--ECRFKK 253
TGI+Q V EA+ +W I ++ + +W D +L E + +
Sbjct: 62 FTGIKQEDVAGAPQFREAVKAFTEW-----IGEEDYYLCSWGPDDKMQLLRQTRELQMEL 116
Query: 254 IWKPPY------FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
W + ++R IN EV+ V LK A+E+ + QG+ H LDDA NTA
Sbjct: 117 DWIRNHNNLQSQYSRMIN-----PEVYKQV--GLKRALEIEEIVLQGQQHRALDDAYNTA 169
Query: 308 RL 309
++
Sbjct: 170 QV 171
>gi|374322575|ref|YP_005075704.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus terrae HPL-003]
gi|357201584|gb|AET59481.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus terrae HPL-003]
Length = 223
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC--FQTYVRPTCNQLLSDFCKD 195
+++ D E T ++ Y EII+ +V V L A F ++VRP+ +LS
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVMKGEDGLYAADTFHSFVRPSNRPVLSTDTVQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q +D EA+ + WL ++ + + W D R L S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFIAWLGT----DSPYYLCAWGP-DDRQKLVSHCRTHHV- 115
Query: 256 KPPYFNRWINLKVPFHEVFGG----VRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+ + +++ + G + +L +A+E+ + + G+ H LDDA NTA+
Sbjct: 116 DLNWIHNTNDIQKQISRLSGSNGKYRQLSLSQALELCNIDFDGQQHRALDDALNTAQ--- 172
Query: 312 LLMHRGFKFSITNS 325
+ MH + +++N+
Sbjct: 173 VFMHHFDRITLSNN 186
>gi|317128841|ref|YP_004095123.1| exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
gi|315473789|gb|ADU30392.1| Exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
Length = 256
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 139 VVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLE--ACFQTYVRPTCNQLLSDFCKDL 196
+V D E T + +++ Q IIE +V + + G+L + FQ YV P N+ +S ++
Sbjct: 4 IVFDLETTRNMNRSS-MQYIIEIGAVKLVNRGGKLSYHSRFQAYVLPP-NKYVSKADREF 61
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
++ L + + + W+ NK + + WS D +++ + ++
Sbjct: 62 IHASKMDFKHAKKLRDTMRQFIHWIGNKP-----YYLCAWSTSDLHILVRNY-----VYG 111
Query: 257 PPYFNRWI----NLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
Y WI +L+ F E+ R +L ++++M+G+ +G H +DDA NTA++L
Sbjct: 112 QKYNLSWIENYNDLQQKFGEMININRQISLTDSLKMSGIKLEGNQHSAIDDAMNTAKIL 170
>gi|398393460|ref|XP_003850189.1| RNA binding zinc finger protein, RanBP2-type [Zymoseptoria tritici
IPO323]
gi|339470067|gb|EGP85165.1| RNA binding zinc finger protein, RanBP2-type [Zymoseptoria tritici
IPO323]
Length = 676
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 132 PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
P +F+ + +I TCD KD E+IE V+V + + E Q+ +
Sbjct: 42 PAQFEKYCIIHIATTCDEHGVYVTKDS----AEVIEIGWVVVDAQNPERELHRQSVLVRP 97
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-------ENKGIKNTNFAVVTWS 237
N ++ C LT + V T +A+ D + E N FA VT +
Sbjct: 98 VNTPITPLCTSLTTLTWEHVKNAGTFRDAINTFDAYASENLVPKEAGPGANPTFAFVTLT 157
Query: 238 NWDCRVMLESECRFKKIWKPPYFNRWI 264
WD RV L E R K + PPY +
Sbjct: 158 PWDLRVQLPREARDKNVVLPPYLQHPV 184
>gi|421078843|ref|ZP_15539791.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium wasabiae
CFBP 3304]
gi|401706515|gb|EJS96690.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium wasabiae
CFBP 3304]
Length = 214
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 136 QYFVVIDFEATCDKDKNPYPQEIIEFP----SVIVSSVTG----------------QLEA 175
+Y + +D EATCD YP+ + S++V+ Q+
Sbjct: 20 RYLICLDVEATCDD----YPKSMSVADRAGHSLLVTPEEMEIIEIGIVALDLRQHYQVVT 75
Query: 176 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVT 235
F +V+P + L+ FCK LTGI+Q VD S+ D L+ I+ + +
Sbjct: 76 NFSQFVQPIIHPDLTPFCKALTGIKQNDVDSAQPFSKVSQIVDTLLQPFLIEGVVWC--S 133
Query: 236 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 295
W +D ++ +C + + + + + + VF +LK+AVE + W+G+
Sbjct: 134 WGTYDAD-QIKRDCVRLGVKSSLNDLKHLPVDLFYSNVFDTPAPDLKKAVESLEITWEGQ 192
Query: 296 AHCGLDDAKNTARLLALLM 314
H LDD+++ A L+ L+
Sbjct: 193 YHRALDDSRHVALLVTKLL 211
>gi|376267409|ref|YP_005120121.1| exonuclease family protein [Bacillus cereus F837/76]
gi|364513209|gb|AEW56608.1| exonuclease family protein [Bacillus cereus F837/76]
Length = 281
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSENPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|423574861|ref|ZP_17550980.1| hypothetical protein II9_02082 [Bacillus cereus MSX-D12]
gi|401211131|gb|EJR17880.1| hypothetical protein II9_02082 [Bacillus cereus MSX-D12]
Length = 281
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + + + R +++ I VTW D R L +C +
Sbjct: 64 TGITKKDLMNVEKFPQIIERFIQFIGEDSI------FVTWGKEDYR-FLSHDCTLHAVEC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|121719217|ref|XP_001276323.1| RNA binding protein (Arp), putative [Aspergillus clavatus NRRL 1]
gi|119404521|gb|EAW14897.1| RNA binding protein (Arp), putative [Aspergillus clavatus NRRL 1]
Length = 613
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|70985240|ref|XP_748126.1| RNA binding protein (Arp) [Aspergillus fumigatus Af293]
gi|66845754|gb|EAL86088.1| RNA binding protein (Arp), putative [Aspergillus fumigatus Af293]
gi|159125951|gb|EDP51067.1| RNA binding protein (Arp), putative [Aspergillus fumigatus A1163]
Length = 613
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|49186337|ref|YP_029589.1| exonuclease [Bacillus anthracis str. Sterne]
gi|167637136|ref|ZP_02395416.1| exonuclease family protein [Bacillus anthracis str. A0193]
gi|190564581|ref|ZP_03017502.1| exonuclease family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227813635|ref|YP_002813644.1| exonuclease [Bacillus anthracis str. CDC 684]
gi|229601907|ref|YP_002867732.1| exonuclease [Bacillus anthracis str. A0248]
gi|254686103|ref|ZP_05149962.1| exonuclease [Bacillus anthracis str. CNEVA-9066]
gi|254723504|ref|ZP_05185292.1| exonuclease [Bacillus anthracis str. A1055]
gi|254738576|ref|ZP_05196279.1| exonuclease [Bacillus anthracis str. Western North America USA6153]
gi|254752894|ref|ZP_05204930.1| exonuclease [Bacillus anthracis str. Vollum]
gi|254759166|ref|ZP_05211192.1| exonuclease [Bacillus anthracis str. Australia 94]
gi|421508154|ref|ZP_15955069.1| exonuclease [Bacillus anthracis str. UR-1]
gi|421637138|ref|ZP_16077736.1| exonuclease [Bacillus anthracis str. BF1]
gi|49180264|gb|AAT55640.1| exonuclease family protein [Bacillus anthracis str. Sterne]
gi|167514643|gb|EDR90009.1| exonuclease family protein [Bacillus anthracis str. A0193]
gi|190563898|gb|EDV17862.1| exonuclease family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227004277|gb|ACP14020.1| exonuclease family protein [Bacillus anthracis str. CDC 684]
gi|229266315|gb|ACQ47952.1| exonuclease family protein [Bacillus anthracis str. A0248]
gi|401821685|gb|EJT20840.1| exonuclease [Bacillus anthracis str. UR-1]
gi|403395934|gb|EJY93172.1| exonuclease [Bacillus anthracis str. BF1]
Length = 281
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|119499117|ref|XP_001266316.1| RNA binding protein (Arp), putative [Neosartorya fischeri NRRL 181]
gi|119414480|gb|EAW24419.1| RNA binding protein (Arp), putative [Neosartorya fischeri NRRL 181]
Length = 613
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHRESVLVKP-VN 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|49481766|ref|YP_037618.1| exonuclease [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|52141997|ref|YP_084833.1| exonuclease [Bacillus cereus E33L]
gi|196038482|ref|ZP_03105791.1| exonuclease family protein [Bacillus cereus NVH0597-99]
gi|49333322|gb|AAT63968.1| exonuclease family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975466|gb|AAU17016.1| exonuclease family protein [Bacillus cereus E33L]
gi|196030890|gb|EDX69488.1| exonuclease family protein [Bacillus cereus NVH0597-99]
Length = 281
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|379723943|ref|YP_005316074.1| hypothetical protein PM3016_6293 [Paenibacillus mucilaginosus 3016]
gi|386726675|ref|YP_006193001.1| hypothetical protein B2K_31805 [Paenibacillus mucilaginosus K02]
gi|378572615|gb|AFC32925.1| hypothetical protein PM3016_6293 [Paenibacillus mucilaginosus 3016]
gi|384093800|gb|AFH65236.1| hypothetical protein B2K_31805 [Paenibacillus mucilaginosus K02]
Length = 221
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSV--TGQLEACFQTYVRPTCNQLLSDFCKD 195
+++ D E T + ++ EIIE +V V T + FQT+V+PT L+
Sbjct: 3 YIIYDLEFTVQRKQHQIA-EIIEIGAVRVKETDGTAAIVDTFQTFVKPTKQPTLTPSTVS 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES--ECRFKK 253
TGI+Q V EA+ +W I ++ + +W D +L E + +
Sbjct: 62 FTGIKQEDVVGAPQFREAVKAFTEW-----IGEEDYYLCSWGPDDKMQLLRQTRELQMEL 116
Query: 254 IWKPPY------FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
W + ++R IN EV+ V LK A+E+ + QG+ H LDDA NTA
Sbjct: 117 DWIRNHNNLQSQYSRMIN-----PEVYKQV--GLKRALEIEEIVLQGQQHRALDDAYNTA 169
Query: 308 RLLA 311
++
Sbjct: 170 QVFV 173
>gi|255656372|ref|ZP_05401781.1| putative exonuclease [Clostridium difficile QCD-23m63]
Length = 342
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 4 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 63 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 119
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N NL V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 120 NHPRFVNNIRNLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 176
>gi|254744865|ref|ZP_05202543.1| exonuclease [Bacillus anthracis str. Kruger B]
Length = 281
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|218904663|ref|YP_002452497.1| exonuclease [Bacillus cereus AH820]
gi|218535470|gb|ACK87868.1| exonuclease family protein [Bacillus cereus AH820]
Length = 281
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|228928575|ref|ZP_04091612.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831087|gb|EEM76687.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 281
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|336124142|ref|YP_004566190.1| KapD [Vibrio anguillarum 775]
gi|335341865|gb|AEH33148.1| KapD [Vibrio anguillarum 775]
Length = 176
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G + Q YVRP +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDVQLGTIVKRAQYYVRPEQDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L+ + ++N G N + V+W D +L EC K
Sbjct: 62 SELTGITPRKIEKQGRPLAGVI---QSMVKNFGGPNKIY--VSWGRDD--QILAKECEQK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F+ +INL + + R + A E G+ W+GR H DA N A+ L
Sbjct: 115 GIVMP--FSEFINLATLYRIQQRMKEKRIGHRAAQEAQGIEWEGRQHSAYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|84387084|ref|ZP_00990106.1| hypothetical protein V12B01_03993 [Vibrio splendidus 12B01]
gi|84377945|gb|EAP94806.1| hypothetical protein V12B01_03993 [Vibrio splendidus 12B01]
Length = 176
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +D EIIE + V+G + Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSEDGVGTTGEIIEIGLAEIDLVSGTIVKRAQYYVKPEKDEV-SLFCAEL 64
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI ++++ E++++ ++N G +A W D ++L EC K I +
Sbjct: 65 TGITPRKIEKQGRPLESVIK--SMIKNFGGPKKIYA--AWGRDD--LILHKECIEKGI-E 117
Query: 257 PPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
PP F+ ++N+ + R + A E + W+GR H G DA N A+ LAL M
Sbjct: 118 PP-FSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAK-LALTM 175
>gi|294499220|ref|YP_003562920.1| exonuclease family protein [Bacillus megaterium QM B1551]
gi|294349157|gb|ADE69486.1| exonuclease family protein [Bacillus megaterium QM B1551]
Length = 311
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 138 FVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
F+ DFE C P+ E I +V + T +E F Y++PT LS FCK+L
Sbjct: 7 FIFFDFEMLCSNKGMPFEDMEAIRLGAVKYNIETEDIE-FFDRYIQPTKRVSLSRFCKEL 65
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC-RVMLES---ECRFK 252
TGI+ + W+ GIK + F +WS D R+ +++ E
Sbjct: 66 TGIKDTDLVGASNFKNVFEDFLTWI--GGIKKSRF--FSWSTSDLSRLKIDAAKHEISLA 121
Query: 253 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
I K R+++ + F + +++ + + L ++G+ H + DA NT R+
Sbjct: 122 TIKKIE--QRYVDFQEIFTKRVSENNVSVENGLALYNLQFEGKKHNPMYDAYNTLRI 176
>gi|296450179|ref|ZP_06891940.1| exonuclease superfamily protein [Clostridium difficile NAP08]
gi|296878560|ref|ZP_06902565.1| exonuclease superfamily protein [Clostridium difficile NAP07]
gi|296260942|gb|EFH07776.1| exonuclease superfamily protein [Clostridium difficile NAP08]
gi|296430367|gb|EFH16209.1| exonuclease superfamily protein [Clostridium difficile NAP07]
Length = 345
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 7 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 65
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 66 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 122
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N NL V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 123 NHPRFVNNIRNLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 179
>gi|118478787|ref|YP_895938.1| exonuclease [Bacillus thuringiensis str. Al Hakam]
gi|196042618|ref|ZP_03109857.1| exonuclease family protein [Bacillus cereus 03BB108]
gi|229185755|ref|ZP_04312932.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus BGSC
6E1]
gi|118418012|gb|ABK86431.1| exonuclease family protein [Bacillus thuringiensis str. Al Hakam]
gi|196026102|gb|EDX64770.1| exonuclease family protein [Bacillus cereus 03BB108]
gi|228597727|gb|EEK55370.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus BGSC
6E1]
Length = 281
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|125973027|ref|YP_001036937.1| exonuclease, RNase T and DNA polymerase III [Clostridium
thermocellum ATCC 27405]
gi|256004824|ref|ZP_05429799.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 2360]
gi|281417237|ref|ZP_06248257.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum JW20]
gi|385779058|ref|YP_005688223.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 1313]
gi|419721731|ref|ZP_14248888.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum AD2]
gi|419725177|ref|ZP_14252229.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum YS]
gi|125713252|gb|ABN51744.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum ATCC 27405]
gi|255991274|gb|EEU01381.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 2360]
gi|281408639|gb|EFB38897.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum JW20]
gi|316940738|gb|ADU74772.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 1313]
gi|380771364|gb|EIC05232.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum YS]
gi|380782308|gb|EIC11949.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum AD2]
Length = 215
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
++V D E K+ P EIIE ++ ++ ++ F ++++P + L K T
Sbjct: 3 YIVYDLELNSKPFKSSIPNEIIEIGAIKLNENLQEI-GMFSSFIKPKYFKKLFSVVKQKT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q Q++ + + + +W+ + ++ +++W + D + L C+F +I K
Sbjct: 62 KITQEQINSADSFRNVIKQFIRWIGD------DYLLISWGHDDV-LNLILNCKFNRI-KI 113
Query: 258 PYFNRWINLKVPFHEVF---GGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ R I+++ F ++ G R +L+ A+ + G+ H L DA+ TA++
Sbjct: 114 DWLKRNIDIQKQFSAIYHLPSGQRYSLENALALIGVEIDENLHRALTDAQYTAKI 168
>gi|423604836|ref|ZP_17580729.1| hypothetical protein IIK_01417 [Bacillus cereus VD102]
gi|401243984|gb|EJR50348.1| hypothetical protein IIK_01417 [Bacillus cereus VD102]
Length = 281
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + + + R +++ I VTW D R L +C +
Sbjct: 64 TGITKKDLMNVEKFPQIIERFIQFIGEDSI------FVTWGKEDYR-FLSHDCTLHAVEC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|115437370|ref|XP_001217793.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188608|gb|EAU30308.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 610
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 9 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHRESVLVKPV-N 63
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 64 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 123
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 124 PREARDKAVVLPPYLQHSRTFDLRT 148
>gi|206975330|ref|ZP_03236243.1| exonuclease family protein [Bacillus cereus H3081.97]
gi|217960931|ref|YP_002339499.1| exonuclease [Bacillus cereus AH187]
gi|375285435|ref|YP_005105874.1| DNA polymerase III subunit epsilon [Bacillus cereus NC7401]
gi|423353220|ref|ZP_17330847.1| hypothetical protein IAU_01296 [Bacillus cereus IS075]
gi|423374666|ref|ZP_17352004.1| hypothetical protein IC5_03720 [Bacillus cereus AND1407]
gi|423567587|ref|ZP_17543834.1| hypothetical protein II7_00810 [Bacillus cereus MSX-A12]
gi|206746232|gb|EDZ57626.1| exonuclease family protein [Bacillus cereus H3081.97]
gi|217064747|gb|ACJ78997.1| exonuclease family protein [Bacillus cereus AH187]
gi|358353962|dbj|BAL19134.1| DNA polymerase III, epsilon chain [Bacillus cereus NC7401]
gi|401089860|gb|EJP98024.1| hypothetical protein IAU_01296 [Bacillus cereus IS075]
gi|401093954|gb|EJQ02040.1| hypothetical protein IC5_03720 [Bacillus cereus AND1407]
gi|401213646|gb|EJR20385.1| hypothetical protein II7_00810 [Bacillus cereus MSX-A12]
Length = 281
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + + + R +++ I VTW D R L +C +
Sbjct: 64 TGITKKDLMNVEKFPQIIERFIQFIGEDSI------FVTWGKEDYR-FLSHDCTLHGVEC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|205374693|ref|ZP_03227487.1| sporulation inhibitor KapD [Bacillus coahuilensis m4-4]
Length = 205
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE V+ G + F +YV+P + L+ CK I+Q VD G++ E +
Sbjct: 28 EIIEVGMVVEED--GSIIESFSSYVQPRVFKTLTPRCKKFLKIKQEDVDGGISFIEFIHY 85
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGG 276
K NK K +N+ + N D +V+ E+ + ++ P+ +++L + + FG
Sbjct: 86 LQKL--NKKRKKSNYYL---GNMDMKVLRENCEKAGLLF--PFQGEFVDLSLEYKRFFGD 138
Query: 277 V-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ L +AVE G G+ H LDDA T + L+
Sbjct: 139 RNQTGLWKAVEEYGKDGVGKHHKALDDAMTTYNIYKLV 176
>gi|401563833|ref|ZP_10804768.1| exonuclease [Selenomonas sp. FOBRC6]
gi|400189453|gb|EJO23547.1| exonuclease [Selenomonas sp. FOBRC6]
Length = 219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q QV SE+
Sbjct: 27 EIIEIGAVRLNENFEQ-EDEFQCYVCPEYG-MVKKHITELTGITQEQVAGRPAFSESFHS 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W I + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK----LPAFDVGWLDARWVDLQQAF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G ++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNTSAVLALM 178
>gi|407072393|ref|ZP_11103231.1| hypothetical protein VcycZ_22729 [Vibrio cyclitrophicus ZF14]
Length = 176
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C ++ EIIE + +G + Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSENGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SLFCAEL 64
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI ++++ E++++ ++N G +A W D ++L EC+ K I +
Sbjct: 65 TGITPRKIEKQGRPLESVIKS--MIKNFGGPKKIYA--AWGRDD--LILHKECKEKGI-E 117
Query: 257 PPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
PP F+ +IN+ + R + A E + W+GR H G DA N A+L ++
Sbjct: 118 PP-FSEFINIATLYRIQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLTLTML 176
>gi|423084136|ref|ZP_17072641.1| exonuclease [Clostridium difficile 002-P50-2011]
gi|423086807|ref|ZP_17075198.1| exonuclease [Clostridium difficile 050-P50-2011]
gi|357543183|gb|EHJ25216.1| exonuclease [Clostridium difficile 002-P50-2011]
gi|357545916|gb|EHJ27879.1| exonuclease [Clostridium difficile 050-P50-2011]
Length = 345
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 7 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEDLYPHIQE 65
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I +++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 66 LTHISSEELESAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 122
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 123 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 179
>gi|365539703|ref|ZP_09364878.1| KapD [Vibrio ordalii ATCC 33509]
Length = 176
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G + Q YVRP +++ S FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDVQLGTIVKRAQYYVRPEQDEI-SLFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI ++++ G L+ + ++N G N + V+W D +L EC K
Sbjct: 62 SELTGITPRKIEKQGRPLAGVI---QSMVKNFGGPNKIY--VSWGRDD--QILAKECGQK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
I P F+ +INL + + R + A E G+ W+GR H DA N A+ L
Sbjct: 115 GIVMP--FSEFINLATLYRIQQRMKEKRIGHRAAQEAQGIEWEGRQHSAYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|429737126|ref|ZP_19270998.1| exonuclease [Selenomonas sp. oral taxon 138 str. F0429]
gi|429153270|gb|EKX96057.1| exonuclease [Selenomonas sp. oral taxon 138 str. F0429]
Length = 219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q QV SE+
Sbjct: 27 EIIEIGAVRLNENFEQ-EDEFQCYVCPEYG-MVKKHITELTGITQEQVAGRPAFSESFHS 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W I + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK----LPAFDVGWLDARWVDLQQAF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G ++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNTSAVLALM 178
>gi|300117664|ref|ZP_07055446.1| exonuclease [Bacillus cereus SJ1]
gi|298724997|gb|EFI65657.1| exonuclease [Bacillus cereus SJ1]
Length = 261
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + + V++ + E +R + VTW D R L +C
Sbjct: 64 TGITKKDLMGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHS 113
Query: 254 IWKP-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|160893764|ref|ZP_02074548.1| hypothetical protein CLOL250_01318 [Clostridium sp. L2-50]
gi|156864749|gb|EDO58180.1| exonuclease [Clostridium sp. L2-50]
Length = 216
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 138 FVVIDFEATCDKDKNPY-----PQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++ +DFE + +P EIIE +V + ++++ F+TYV+P + S
Sbjct: 3 YIFVDFEMNQIDNSHPDELKICKNEIIEIGAVKLDDTYKEIDS-FKTYVKPGITPVTSRI 61
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI VD + A+ R W + + + WS D R E + K
Sbjct: 62 T-NLTGITNEMVDDAPDFAIAMDRFIAWGLSADV------IYAWSENDLR-QFNRERKLK 113
Query: 253 KIWKP---PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
P ++W + + F + G R L +AV G +QG+ H L DA+NTA
Sbjct: 114 SYNNPDAQKLASKWKDFQKEFARMLGTRRRLALSDAVFYLGEDFQGKEHDALWDARNTAE 173
Query: 309 LLALLMHR 316
+ L R
Sbjct: 174 VFVLSKDR 181
>gi|260768515|ref|ZP_05877449.1| hypothetical protein VFA_001567 [Vibrio furnissii CIP 102972]
gi|375131053|ref|YP_004993153.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|260616545|gb|EEX41730.1| hypothetical protein VFA_001567 [Vibrio furnissii CIP 102972]
gi|315180227|gb|ADT87141.1| hypothetical protein vfu_A01985 [Vibrio furnissii NCTC 11218]
Length = 156
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEALL 215
EIIE + G++ Q YV+P +++ S FC +LTGI ++++ G L+ +
Sbjct: 6 EIIEVGLAEIDLTAGEIVKRAQYYVKPEHDEV-SLFCVELTGITPRKIEKQGRPLAAVI- 63
Query: 216 RHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPF--HEV 273
++N G +A +W D +M EC+ K I P F +INL +
Sbjct: 64 --QSMVKNFGGSQKIYA--SWGRDDQILM--KECQAKGIDMP--FKEFINLATLYRIQHR 115
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
R + A E G+ W+GR H G DA N A+ LAL M
Sbjct: 116 LKDKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAK-LALTM 155
>gi|242209587|ref|XP_002470640.1| predicted protein [Postia placenta Mad-698-R]
gi|220730319|gb|EED84178.1| predicted protein [Postia placenta Mad-698-R]
Length = 320
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 49/220 (22%)
Query: 133 QEFQYFVVIDFEATC--DKDKNPYPQEIIEFPSVIV-------SSVTGQLEAC--FQTYV 181
Q + F+V+D E TC + YP EIIE+P ++ + + +LE ++++V
Sbjct: 97 QPYDAFLVLDVEGTCVEGTARFDYPNEIIEWPVCLLRWKDKDHNGLAKELEVVDEYRSFV 156
Query: 182 RPTCNQLLSDFCKDLTGIQQI---------QVDRGVTLSEALLRHDKWLENKGI------ 226
+PT LSDFC +LTGI Q+ QV+ T + L +LE G+
Sbjct: 157 KPTWRPRLSDFCTNLTGITQLSSVSLAMQAQVNGAPTFTTLLESFTAFLEKHGLIEPMTG 216
Query: 227 -KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN----------RWINLKVPFHEVFG 275
+ + T +D R + +C ++ P + R +++ +
Sbjct: 217 RRLIRYCWCTDGPFDIRDFVVKQCFISRVAMPTWITGDVLDVRSIVRHLDVAGQGKALTS 276
Query: 276 G-----------VRCNLKEAVEMAGLA-WQGRAHCGLDDA 303
G V N+ + GL ++GR H G+D A
Sbjct: 277 GRKPVSQFPSRRVTLNIPRQLYALGLTPFEGRQHSGIDKA 316
>gi|346308361|ref|ZP_08850479.1| hypothetical protein HMPREF9457_02188 [Dorea formicigenerans
4_6_53AFAA]
gi|345903183|gb|EGX72950.1| hypothetical protein HMPREF9457_02188 [Dorea formicigenerans
4_6_53AFAA]
Length = 218
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 138 FVVIDFEA-TCDKD----KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++VID E +D + + E I+ +V++ ++ +V P ++ F
Sbjct: 3 YLVIDLEMCKVPRDYRSKRYKHANETIQIGAVLLDEEFKRI-GTLSQFVHPEQG-VIDYF 60
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
++LTGI+ QV L EALL W I + + V WS D R + E + K
Sbjct: 61 IENLTGIKNGQVKHAPRLQEALLHMLNW-----IGDREYKVYVWSGSD-RAQILHEIKAK 114
Query: 253 KIW--KPPYF---NRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
I K F +RW++ + F + + R +L+EA+ A + +GR H GL+DA NT
Sbjct: 115 NIVDEKVASFMEESRWVDYQDIFMKRYEMSRKMSLEEALGRADIDPEGRFHDGLNDAVNT 174
Query: 307 ARLLALL 313
L+ L
Sbjct: 175 GLLIEKL 181
>gi|42782602|ref|NP_979849.1| exonuclease [Bacillus cereus ATCC 10987]
gi|42738528|gb|AAS42457.1| exonuclease family protein [Bacillus cereus ATCC 10987]
Length = 281
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSDDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + + + R +++ I VTW D R ++ +C +
Sbjct: 64 TGITKKDLMNVEKFPQIIERFIQFIGEDSI------FVTWGKEDYRFLV-HDCTLHGVDC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|310640616|ref|YP_003945374.1| exonuclease rnase t and DNA polymerase iii [Paenibacillus polymyxa
SC2]
gi|386039741|ref|YP_005958695.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
gi|309245566|gb|ADO55133.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus polymyxa
SC2]
gi|343095779|emb|CCC83988.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
Length = 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEA-CFQTYVRPTCNQLLSDFCKD 195
+++ D E T ++ Y EII+ +V ++ G A F ++VRP+ ++S
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVIHGEDGLFVADTFHSFVRPSNRPVISTDTVQ 61
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
TGI Q +D EA+ + WL ++ + + W D R L S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFIAWLGT----DSTYYLCAWGP-DDRQKLVSHCRTHHV- 115
Query: 256 KPPYFNRWINLKVPFHEVF---GGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + +++ +F G R +L +A+E+ + + G+ H LDDA NTA++
Sbjct: 116 DLGWIHNTNDIQKQISRLFSSNGKYRQLSLSQALELCNIEFDGQQHRALDDAVNTAQVF 174
>gi|166032316|ref|ZP_02235145.1| hypothetical protein DORFOR_02019 [Dorea formicigenerans ATCC
27755]
gi|166028039|gb|EDR46796.1| exonuclease [Dorea formicigenerans ATCC 27755]
Length = 218
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 138 FVVIDFEA-TCDKD----KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
++VID E +D + Y E I+ +V++ ++ +V P + ++ F
Sbjct: 3 YLVIDLEMCKVPRDYRSKRYKYANETIQIGAVLLDEEFKRI-GTLSQFVHPE-HGVIDYF 60
Query: 193 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
++LTGI+ QV L +ALL W I + + V WS D R + E + K
Sbjct: 61 IENLTGIKNGQVKHTPRLQKALLHMLNW-----IGDREYKVYAWSGSD-RAQILHEIKAK 114
Query: 253 KIW--KPPYF---NRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNT 306
I K F +RW++ + F + + R +L+EA+ A + +GR H GL+DA NT
Sbjct: 115 NIVDEKIASFMEESRWVDYQDIFMKRYEMSRKMSLEEALGRADIDPEGRFHDGLNDAVNT 174
Query: 307 ARLLALL 313
L+ L
Sbjct: 175 GLLIEKL 181
>gi|283780009|ref|YP_003370764.1| exonuclease RNase T and DNA polymerase III [Pirellula staleyi DSM
6068]
gi|283438462|gb|ADB16904.1| Exonuclease RNase T and DNA polymerase III [Pirellula staleyi DSM
6068]
Length = 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 138 FVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+V+D E+TC + P+ Q EIIE V Q A ++P ++L S+FC
Sbjct: 8 VLVVDVESTCWQGPPPHGQLSEIIEVGLCTVDVRKRQRLAKRCIMIKPVRSRL-SEFCTR 66
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LT ++ + TL++A+ + + ++ + +W ++D R E C K++
Sbjct: 67 LTTLRDEDLVGAGTLADAV-----SILKREYRSPDRLWASWGDYD-RRQFERVC--KELT 118
Query: 256 KP-PYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
P P+ +N+K F ++G R + EA E G+ +G H G+DDA N A + L
Sbjct: 119 VPYPFGVSHLNIKTLFAVLYGDNREIGVDEACERIGIPMEGTHHRGVDDAWNIAAIFCHL 178
Query: 314 M 314
M
Sbjct: 179 M 179
>gi|255307423|ref|ZP_05351594.1| putative exonuclease [Clostridium difficile ATCC 43255]
Length = 342
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 4 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 63 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 119
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 120 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 176
>gi|408388372|gb|EKJ68058.1| hypothetical protein FPSE_11869 [Fusarium pseudograminearum CS3096]
Length = 634
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + T + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILMDANTLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAITRFDAFATEHLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPF 270
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEY 151
>gi|255101554|ref|ZP_05330531.1| putative exonuclease [Clostridium difficile QCD-63q42]
gi|400927440|ref|YP_001088909.2| exonuclease [Clostridium difficile 630]
gi|328887708|emb|CAJ69282.2| putative exonuclease [Clostridium difficile 630]
Length = 342
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 4 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 63 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 119
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 120 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 176
>gi|334129010|ref|ZP_08502885.1| hypothetical protein HMPREF9081_2473 [Centipeda periodontii DSM
2778]
gi|333385744|gb|EGK56971.1| hypothetical protein HMPREF9081_2473 [Centipeda periodontii DSM
2778]
Length = 219
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q +V SE+
Sbjct: 27 EIIEIGAVRLNEDFEQ-EDEFQCYVCPEYG-MVKKHITELTGITQEKVAGRPVFSESFHA 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W+ G T + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVDWI---GAAETK--IYSWSMSDIK-QLRKECRLK----LPAFDVSWLDTRWVDLQQAF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G +++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRSFEGSQHSALADAINTSAVLALM 178
>gi|384181351|ref|YP_005567113.1| exonuclease [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324327435|gb|ADY22695.1| exonuclease [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 281
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + GV ++ +K+++ G + VTW D R L +C +
Sbjct: 64 TGITKKDLI-GVEQFPQII--EKFIQFIG---EDSIFVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMQKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|423092423|ref|ZP_17080227.1| exonuclease [Clostridium difficile 70-100-2010]
gi|357553925|gb|EHJ35661.1| exonuclease [Clostridium difficile 70-100-2010]
Length = 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 7 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 65
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 66 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 122
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 123 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 179
>gi|254975986|ref|ZP_05272458.1| putative exonuclease [Clostridium difficile QCD-66c26]
gi|255093374|ref|ZP_05322852.1| putative exonuclease [Clostridium difficile CIP 107932]
gi|255315119|ref|ZP_05356702.1| putative exonuclease [Clostridium difficile QCD-76w55]
gi|255517789|ref|ZP_05385465.1| putative exonuclease [Clostridium difficile QCD-97b34]
gi|255650904|ref|ZP_05397806.1| putative exonuclease [Clostridium difficile QCD-37x79]
gi|384361616|ref|YP_006199468.1| exonuclease [Clostridium difficile BI1]
Length = 342
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 4 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 63 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 119
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 120 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 176
>gi|451854057|gb|EMD67350.1| hypothetical protein COCSADRAFT_288608 [Cochliobolus sativus
ND90Pr]
Length = 616
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 10 QAANLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCR 242
N ++ C LT + QV + +A+ R + + E+ KN FA VT +WD R
Sbjct: 66 V-NTPITALCTSLTTLTWDQVRNAGSFRDAIERFNNFHAEHIAPKNLEFAFVTLDSWDLR 124
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKV 268
V L E R K + PPY +R +L+
Sbjct: 125 VQLPREARDKAVVLPPYLQHSRTFDLRT 152
>gi|229086122|ref|ZP_04218342.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
Rock3-44]
gi|228697181|gb|EEL49946.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
Rock3-44]
Length = 281
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 136 QYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+Y++V D E K+ P E+++ ++ V + T ++ F + V+PT L+
Sbjct: 5 KYYIVFDVERNFRPYKSQDPSEVVDIGAIKVEASTMRMIGRFASLVKPTAP--LTRHTTK 62
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIW 255
LTGI + + + + + ++ E+ N VTW D + L +C+ I
Sbjct: 63 LTGITKQDLKEVEMFPKVIEQFLQFTED------NCMFVTWGKEDYK-FLAQDCQLHHIE 115
Query: 256 KPPYFN-RWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P N R +L+ + E+F +LK AVE L W+G+ H DAKNT +
Sbjct: 116 CPSIENERKFDLQKFVFQAYEELFIDT-PSLKFAVEQFALEWEGKQHRAYADAKNTLNIF 174
Query: 311 ALLMHRG--FKFSITNSLMWQTNDGSLT 336
+ +K N + T +G LT
Sbjct: 175 LKVCKEKDIYKRYKRNEELVLTKNGVLT 202
>gi|451999974|gb|EMD92436.1| hypothetical protein COCHEDRAFT_1174391 [Cochliobolus
heterostrophus C5]
Length = 614
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 10 QAANLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCR 242
N ++ C LT + QV + +A+ R + + E+ KN FA VT +WD R
Sbjct: 66 V-NTPITALCTSLTTLTWDQVRNAGSFRDAIERFNNFHAEHIAPKNLEFAFVTLDSWDLR 124
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKV 268
V L E R K + PPY +R +L+
Sbjct: 125 VQLPREARDKAVVLPPYLQHSRTFDLRT 152
>gi|260683975|ref|YP_003215260.1| exonuclease [Clostridium difficile CD196]
gi|260687635|ref|YP_003218769.1| exonuclease [Clostridium difficile R20291]
gi|260210138|emb|CBA64294.1| putative exonuclease [Clostridium difficile CD196]
gi|260213652|emb|CBE05490.1| putative exonuclease [Clostridium difficile R20291]
Length = 345
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 139 VVIDFEATCDKDKNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
V IDFE K+ + +II +V+ T ++ F++ +RP N+ L ++
Sbjct: 7 VYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDK-FKSLIRPVSNEELYPHIQE 65
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR-FKKI 254
LT I ++ + E + + KWL GI + + T+ N D ++ R KK
Sbjct: 66 LTHISSEELKSAPSYEEVMRKFKKWL---GIFSDIKGIYTFGNLDLTCFNNTDMRSAKKN 122
Query: 255 WKPPYFNRWINLKVPFHEVFG--GVRC----NLKEAVEMAGLAWQGRAHCGLDDAKN 305
P + N +L V E + G+RC +LK +E L + G AH L+DA N
Sbjct: 123 NHPRFVNNIRDLFVDIKEKYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYN 179
>gi|86146253|ref|ZP_01064578.1| hypothetical protein MED222_16116 [Vibrio sp. MED222]
gi|218709772|ref|YP_002417393.1| hypothetical protein VS_1784 [Vibrio splendidus LGP32]
gi|85835964|gb|EAQ54097.1| hypothetical protein MED222_16116 [Vibrio sp. MED222]
gi|218322791|emb|CAV18968.1| hypothetical protein VS_1784 [Vibrio splendidus LGP32]
Length = 176
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 138 FVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
V D E C +D EIIE + +G + Q YV+P +++ S FC +L
Sbjct: 6 VVCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SLFCAEL 64
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI ++++ E++++ ++N G +A W D ++L EC K I +
Sbjct: 65 TGITPRKIEKQGRPLESVIK--SMIKNFGGPKKIYA--AWGRDD--LILHKECIEKGI-E 117
Query: 257 PPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
PP F+ ++N+ + R + A E + W+GR H G DA N A+ LAL M
Sbjct: 118 PP-FSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAK-LALTM 175
>gi|345570216|gb|EGX53041.1| hypothetical protein AOL_s00007g377 [Arthrobotrys oligospora ATCC
24927]
Length = 597
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 137 YFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 189
++VVI TCD KD E+IE +++++ + + VRP N +
Sbjct: 2 FYVVIHVATTCDEHGVYVTKDS----AEVIEIGWILLNAKSLEEVHRESVLVRPV-NTPI 56
Query: 190 SDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESE 248
+ C LT + V T +A+ R D ++ E +N +F VT WD RV L E
Sbjct: 57 TPLCTSLTTLTWEHVRNAGTFRDAINRFDSFVQEYLSGQNNDFTFVTLDAWDLRVQLPRE 116
Query: 249 CRFKKIWKPPYF--NRWINLKVPF 270
R K + PPY +R +L+ +
Sbjct: 117 ARDKAVVLPPYLQHSRTFDLRTEY 140
>gi|330930529|ref|XP_003303069.1| hypothetical protein PTT_15105 [Pyrenophora teres f. teres 0-1]
gi|311321193|gb|EFQ88825.1| hypothetical protein PTT_15105 [Pyrenophora teres f. teres 0-1]
Length = 614
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 10 QAANLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCR 242
N ++ C LT + QV + +A+ R + + E+ KN FA VT +WD R
Sbjct: 66 V-NTPITALCTSLTTLTWDQVRNAGSFRDAVERFNNFHAEHIAPKNLEFAFVTLDSWDLR 124
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKV 268
V L E R K + PPY +R +L+
Sbjct: 125 VQLPREARDKSVVLPPYLQHSRTFDLRT 152
>gi|374296263|ref|YP_005046454.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium clariflavum DSM 19732]
gi|359825757|gb|AEV68530.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium clariflavum DSM 19732]
Length = 211
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+++ D E K+ P EIIE +V + S + + FQ +++P + L K T
Sbjct: 3 YIIYDLELNSKPFKSSLPNEIIEIGAVKLDSNLNEFD-TFQAFIKPKYFKKLFPVVKRKT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q ++ E + W+ + N+ +V+W + D L + C+ K+
Sbjct: 62 KITQEDINSAENFKEVITNFRNWIGD------NYILVSWGHDDIH-HLVTGCKINKL-AS 113
Query: 258 PYFNRWINLKVPFHEVFG---GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ + I+L+ ++ G R +L+ A+ + G+ + H L DA+ TA++
Sbjct: 114 NWLKKNIDLQKQVSSIYNVPPGQRYSLENALNILGIEAEENLHRALADARYTAQI 168
>gi|169776033|ref|XP_001822483.1| RNA binding protein (Arp) [Aspergillus oryzae RIB40]
gi|83771218|dbj|BAE61350.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867884|gb|EIT77122.1| RNA-binding Ran Zn-finger protein [Aspergillus oryzae 3.042]
Length = 613
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKTCEELHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D++ + I KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAIARFDEFAKEHLISKNLEFAFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + P Y +R +L+
Sbjct: 125 PREARDKAVVLPAYLQHSRTFDLRT 149
>gi|422343383|ref|ZP_16424311.1| hypothetical protein HMPREF9432_00371 [Selenomonas noxia F0398]
gi|355378690|gb|EHG25870.1| hypothetical protein HMPREF9432_00371 [Selenomonas noxia F0398]
Length = 219
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q +V+ S++
Sbjct: 27 EIIEIGAVRLNENYEQ-EDEFQCYVCPEYG-MVKKHITELTGITQEKVEGHPAFSDSFHS 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W+ G T + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVAWI---GAAETK--IYSWSMSDIK-QLRKECRLK----LPDFDVNWLDTRWVDLQQAF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G ++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNTSAVLALM 178
>gi|326483116|gb|EGE07126.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 637
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +++I TCD KD E+IE +++ + + V+P N
Sbjct: 10 KLDRYIIIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCEEIHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + EN KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|342878485|gb|EGU79822.1| hypothetical protein FOXB_09681 [Fusarium oxysporum Fo5176]
Length = 633
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE ++V + + + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILVDANSLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|124005323|ref|ZP_01690164.1| exonuclease [Microscilla marina ATCC 23134]
gi|123989145|gb|EAY28723.1| exonuclease [Microscilla marina ATCC 23134]
Length = 180
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 133 QEFQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
++ +VID E+TC + P Q EIIE + Q E+ V+PT +++ S
Sbjct: 3 KKLDKILVIDVESTCWQGPPPEGQVSEIIEIGICVFDLKERQRESREGILVKPTQSEV-S 61
Query: 191 DFCKDLTGIQQIQVD-RGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLES 247
FC +LT I +D GV L EA +LR K ++ +W ++D R E
Sbjct: 62 PFCTELTTITPELIDAEGVDLKEACRILR-------KKYESQQRVWGSWGDYD-RRQFER 113
Query: 248 ECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKE-----AVEMAGLAWQGRAHCGLDD 302
C+ + I P+ +N+K +F C +E A+E+ +G H G+DD
Sbjct: 114 NCKNRGI-GYPFGTNHLNVKT----LFAIKNCLERELGMDGAMELMQWELEGTHHRGVDD 168
Query: 303 AKNTARLLALLM 314
A N ARL++ L+
Sbjct: 169 AWNIARLMSTLI 180
>gi|296817553|ref|XP_002849113.1| asparagine-rich protein [Arthroderma otae CBS 113480]
gi|238839566|gb|EEQ29228.1| asparagine-rich protein [Arthroderma otae CBS 113480]
Length = 637
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +++I TCD KD E+IE +++ + + V+P N
Sbjct: 10 KLDRYIIIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCEEIHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + EN KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|327301221|ref|XP_003235303.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462655|gb|EGD88108.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 637
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +++I TCD KD E+IE +++ + + V+P N
Sbjct: 10 KLDRYIIIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCEEIHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + EN KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|402556343|ref|YP_006597614.1| exonuclease [Bacillus cereus FRI-35]
gi|401797553|gb|AFQ11412.1| exonuclease [Bacillus cereus FRI-35]
Length = 281
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSDDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
TGI + + GV ++ +K+++ G + VTW D R ++ +C +
Sbjct: 64 TGITKKDL-MGVEKFPQII--EKFIQFIG---EDSIFVTWGKEDYRFLV-HDCTLHGVDC 116
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|315048959|ref|XP_003173854.1| hypothetical protein MGYG_04027 [Arthroderma gypseum CBS 118893]
gi|311341821|gb|EFR01024.1| hypothetical protein MGYG_04027 [Arthroderma gypseum CBS 118893]
Length = 637
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +++I TCD KD E+IE +++ + + V+P N
Sbjct: 10 KLDRYIIIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCEEIHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + EN KN FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|427406957|ref|ZP_18897162.1| hypothetical protein HMPREF9161_01522 [Selenomonas sp. F0473]
gi|425707432|gb|EKU70476.1| hypothetical protein HMPREF9161_01522 [Selenomonas sp. F0473]
Length = 219
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P + +LTGI Q +V+ +E+
Sbjct: 27 EIIEIGAVRLNEKFVQ-EDKFQCYVCPEYGPV-KKHITELTGITQDKVNGQHVFAESFRN 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W I + + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVDW-----IGASETKIYSWSMSDIK-QLHKECRLK----VPDFDVDWLDTRWVDLQQAF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G +++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRSFEGAQHSALADAINTSAVLALM 178
>gi|292669904|ref|ZP_06603330.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648701|gb|EFF66673.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 219
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q +V+ S++
Sbjct: 27 EIIEIGAVRLNENYEQ-EDEFQCYVCPEYG-MVKKHITELTGITQEKVEGHPAFSDSFHS 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W+ G T + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVAWI---GAAETK--IYSWSMSDIK-QLRKECRLK----LPDFDVNWLDTRWVDLQQEF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G ++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNTSAVLALM 178
>gi|366165090|ref|ZP_09464845.1| exonuclease, RNase T and DNA polymerase III [Acetivibrio
cellulolyticus CD2]
Length = 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
+++ D E K+ P EIIE ++ + S +++ FQ +++P + L K T
Sbjct: 3 YIIYDLELNSKPFKSKLPNEIIEIGAIKLDSDLKEID-TFQAFIKPHYFKKLFPVVKRKT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
I Q V+ + E + KW+ + I +++W + D +L + C+ KI
Sbjct: 62 KITQEDVNNAESFKEIISSFRKWIGDNSI------LISWGHDDVHHLLVN-CKNNKI-TT 113
Query: 258 PYFNRWINLK---VPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 314
+ + I+L+ +EV G R +L+ A+ + + H L DA+ TA++ +
Sbjct: 114 SWLKKNIDLQKQVSSIYEVPAGQRYSLENAINVLEIDVGESFHRALADARYTAQIFSKTF 173
Query: 315 HRGFKFSITNSL 326
R S+ NSL
Sbjct: 174 DR-LDLSVFNSL 184
>gi|384490325|gb|EIE81547.1| hypothetical protein RO3G_06252 [Rhizopus delemar RA 99-880]
Length = 147
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV-VTWSNWDCRVMLESECRFKKI 254
LTGI Q VD + L + ++L + ++ A+ VT +D R + + I
Sbjct: 3 LTGITQDTVDNSPVFIDVLNQFQEFLAKYSLFQSSTAIFVTDGPFDIRDFITKQITHSNI 62
Query: 255 W-KPPYFNR-WINLKVPFHEVFGGVRC-NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+P YFN WIN++ F + + + N+ + ++++GR H GLDDA+N A +
Sbjct: 63 DPRPAYFNLPWINIRKLFKDFYHQTQSKNIASMLSHLEMSFEGREHSGLDDARNLAYIAK 122
Query: 312 LLMHRG 317
+ G
Sbjct: 123 RMFEDG 128
>gi|258571315|ref|XP_002544461.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904731|gb|EEP79132.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 610
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + + + V+P N
Sbjct: 11 KLDRYIVIHVSTTCDEHGVYVTKDS----AEVIELGWILLDTKSCEELHRESVLVKPV-N 65
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + + KN FA VT +WD RV L
Sbjct: 66 TPITPLCTSLTTLTWEHVRSAGTFRDAVNRFDAFAQEHLLSKNLEFAFVTLDSWDMRVQL 125
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 126 PREARDKAVVLPPYLQHSRTFDLRT 150
>gi|389635819|ref|XP_003715562.1| asparagine-rich protein [Magnaporthe oryzae 70-15]
gi|351647895|gb|EHA55755.1| asparagine-rich protein [Magnaporthe oryzae 70-15]
gi|440470228|gb|ELQ39309.1| asparagine-rich protein [Magnaporthe oryzae Y34]
gi|440485060|gb|ELQ65056.1| asparagine-rich protein [Magnaporthe oryzae P131]
Length = 629
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 125 AHPYDFQ-PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEAC 176
A+P Q P +VV+ TCD KD E+IE +++ + T +
Sbjct: 2 ANPQGMQTPLSVDRYVVLHAATTCDEHGVYVTKDS----AEVIELGWILLDAKTLEELHH 57
Query: 177 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVT 235
V+P N ++ C LT + V T +A+ R D + E+ +N +F VT
Sbjct: 58 ESVLVKPV-NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVT 116
Query: 236 WSNWDCRVMLESECRFKKIWKPPYF--NRWINLKV 268
+ WD RV L E R K + PPY +R +L+
Sbjct: 117 FEAWDLRVQLPREARDKSVVLPPYLQHSRTFDLRT 151
>gi|326475517|gb|EGD99526.1| RNA binding protein [Trichophyton tonsurans CBS 112818]
Length = 701
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +++I TCD KD E+IE +++ + + V+P N
Sbjct: 80 KLDRYIIIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCEEIHRESVLVKPV-N 134
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + EN KN FA VT +WD RV L
Sbjct: 135 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQL 194
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 195 PREARDKAVVLPPYLQHSRTFDLRT 219
>gi|119182868|ref|XP_001242536.1| hypothetical protein CIMG_06432 [Coccidioides immitis RS]
gi|303319481|ref|XP_003069740.1| Zn-finger in Ran binding protein and others domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240109426|gb|EER27595.1| Zn-finger in Ran binding protein and others domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|320040805|gb|EFW22738.1| RNA binding protein [Coccidioides posadasii str. Silveira]
gi|392865438|gb|EAS31227.2| RNA binding protein [Coccidioides immitis RS]
Length = 618
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + + + V+P N
Sbjct: 11 KLDRYIVIHVSTTCDEHGVYVTKDS----AEVIELGWILLDTKSCEELHRESVLVKP-IN 65
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + + KN FA VT +WD RV L
Sbjct: 66 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLLSKNLEFAFVTLDSWDMRVQL 125
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 126 PREARDKAVVLPPYLQHSRTFDLRT 150
>gi|340522875|gb|EGR53108.1| RNA-binding ran Zn-finger protein [Trichoderma reesei QM6a]
Length = 624
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + T + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANTLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|422593815|ref|ZP_16668107.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|330984124|gb|EGH82227.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 206
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 10/181 (5%)
Query: 136 QYFVVIDFEATC-----DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+Y + ID E TC + +E+IE + ++ ++P + +LS
Sbjct: 15 RYLIGIDLECTCWPAEMVGAPDRMEREVIEIGLAAIDMEKLEIVGTHSVLIKPEHHPVLS 74
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
+FC LT I ++ E L + WL N ++A +W +D L+ E
Sbjct: 75 EFCTSLTTITNEMLECAPLFPEGLDQAMGWLSKF---NEDYAWCSWGMFDLH-HLQHESH 130
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
K + N K + + + R +K A++ G+ G H G+DDA N ARL
Sbjct: 131 RKGVELGLRSTLHFNAKTLYSQSHPRLKRRGMKSALDHEGVKLAGTHHRGVDDATNMARL 190
Query: 310 L 310
+
Sbjct: 191 I 191
>gi|251780665|ref|ZP_04823585.1| exonuclease, RNase T and DNA polymerase III [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243084980|gb|EES50870.1| exonuclease, RNase T and DNA polymerase III [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 243
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
E+I+ +V ++S ++ + F ++PT + + F KDLT I V+ S+
Sbjct: 26 EVIQIGAVKLNS-NLEVVSTFNRLIKPTVHTEIHPFIKDLTQITTEMVNSEKYFSDV--- 81
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWI---NLKVPFHEV 273
+D ++E G N F V W D + +L++ +F + + ++I NL + +
Sbjct: 82 YDDFIEFIG--NKEFTVCIWGTSDIKELLKN-VKFHNLEEIDDLRKYIDVQNLASKYIKT 138
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
G + LK A+E L + H +DA TA++ L K S N+
Sbjct: 139 QKGTKVGLKTAIEFFNLPIEKEFHDAFNDAHYTAQIFKKLYTSKVKSSTYNN 190
>gi|361127515|gb|EHK99482.1| putative Uncharacterized RNA-binding protein C17H9.04c [Glarea
lozoyensis 74030]
Length = 637
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 133 QEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 185
Q +VVI TCD KD E+IE +++ + + V+P
Sbjct: 9 QNLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKNCEELYRDSVLVKP-I 63
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVM 244
N ++ C LT + V T +A+ R D + E+ +N +F+ VT +WD RV
Sbjct: 64 NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFSFVTLDSWDLRVQ 123
Query: 245 LESECRFKKIWKPPYF--NRWINLKV 268
L E R K + PPY +R +L+
Sbjct: 124 LPREARDKAVVLPPYLQHSRTFDLRT 149
>gi|260772767|ref|ZP_05881683.1| hypothetical protein VIB_001223 [Vibrio metschnikovii CIP 69.14]
gi|260611906|gb|EEX37109.1| hypothetical protein VIB_001223 [Vibrio metschnikovii CIP 69.14]
Length = 176
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 135 FQYFVVIDFEATC-DKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 193
+ V D E C +++ EIIE + G++ Q YV+P +++ S+FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLTAGKIVKRAQYYVQPEQDKI-SEFC 61
Query: 194 KDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 252
+LTGI +V + G L++ L ++N G +A W D ++L EC K
Sbjct: 62 VELTGITPRKVAKQGRPLADVL---RSMVKNFGGSKKIYA--CWGRDD--LILAKECAQK 114
Query: 253 KIWKPPYFNRWINLKVPF--HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ P + INL + R + A E G+ W+GR H G DA N A+ L
Sbjct: 115 GLPMP--IHECINLATLYRLQHRLKDKRIGHRAAQEAQGIDWEGRQHSGYVDAYNLAK-L 171
Query: 311 ALLM 314
AL M
Sbjct: 172 ALTM 175
>gi|399052328|ref|ZP_10741825.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Brevibacillus sp. CF112]
gi|433544122|ref|ZP_20500513.1| hypothetical protein D478_10485 [Brevibacillus agri BAB-2500]
gi|398049813|gb|EJL42213.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Brevibacillus sp. CF112]
gi|432184601|gb|ELK42111.1| hypothetical protein D478_10485 [Brevibacillus agri BAB-2500]
Length = 239
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+V D E T ++ P EIIE + +V+ G FQ Y P + +++ +
Sbjct: 3 IIVYDLETTLTHQRDKIP-EIIEIGAAKVVTGKNGVEVDTFQRYTFPAIERRITERTRKF 61
Query: 197 TGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
G+ + + + +A D +L+ G + ++ + +W D R+M+E RF +
Sbjct: 62 IGLDKENMPTFIPFRKAF---DAFLDWIGT-DEDYYLCSWGQDDKRLMIEHCARFGLDFN 117
Query: 257 PPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + +++ + + +LK+A++ AG+ +GR H L DA +TA LL
Sbjct: 118 --WLRNYNDIQPAISMLLADRKQMSLKDAIDAAGIVQEGRLHSALVDAIHTAHLL 170
>gi|440632612|gb|ELR02531.1| hypothetical protein GMDG_01056 [Geomyces destructans 20631-21]
Length = 632
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTY-----VRPTC 185
+VV+ TCD KD E+IE +++ + + C + Y V+P
Sbjct: 16 YVVVHVATTCDEHGVYVTKDS----AEVIELGWILLDA-----KNCDELYRESVLVKPI- 65
Query: 186 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVM 244
N ++ C LT + V T +A+ R D + E+ KN +F+ VT +WD RV
Sbjct: 66 NTPITPLCTSLTTLTWEHVRNAGTFRDAITRFDAFASEHLTSKNLDFSFVTLDSWDLRVQ 125
Query: 245 LESECRFKKIWKPPYF--NRWINLKV 268
L E R K + PPY +R +L+
Sbjct: 126 LPREARDKAVVLPPYLQHSRTFDLRT 151
>gi|358392278|gb|EHK41682.1| hypothetical protein TRIATDRAFT_163678, partial [Trichoderma
atroviride IMI 206040]
Length = 622
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILIDANSLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|407926037|gb|EKG19008.1| hypothetical protein MPH_03698 [Macrophomina phaseolina MS6]
Length = 633
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 7 QGSNLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 62
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCR 242
N ++ C LT + V + +A+ R D++ E+ KN FA VT +WD R
Sbjct: 63 V-NTPITPLCTSLTTLTWEHVRNSGSFRDAINRFDQFANEHLLSKNHEFAFVTLDSWDLR 121
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKVPF 270
V L E R K + PPY +R +L+ +
Sbjct: 122 VQLPREARDKAVVLPPYLQHSRTFDLRTEY 151
>gi|409051696|gb|EKM61172.1| hypothetical protein PHACADRAFT_247611, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 136
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 234 VTWSNWDCRVMLESECRF----------KKIWKPPYFNRWINLKVPFHEVFGGVRCN--L 281
VT +WD + ML + ++ P +NRWIN+K PF + F R N +
Sbjct: 19 VTCGDWDLKTMLPKQLSLVEADHGLDESGRVVAP--YNRWINIKTPFKKRFNMTRFNVSM 76
Query: 282 KEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
++ L +GR H G+DD KN R++ ++ G+ + T +
Sbjct: 77 PAMLKKLQLELEGRHHSGIDDCKNILRIIEKMIATGWDPNTTQA 120
>gi|189210006|ref|XP_001941335.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977428|gb|EDU44054.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 614
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 10 QAANLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCR 242
N ++ C LT + QV + +A+ R + + E+ +N FA VT +WD R
Sbjct: 66 V-NTPITALCTSLTTLTWDQVRNAGSFRDAVERFNNFHAEHIAPQNLEFAFVTLDSWDLR 124
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKV 268
V L E R K + PPY +R +L+
Sbjct: 125 VQLPREARDKSVVLPPYLQHSRTFDLRT 152
>gi|358367883|dbj|GAA84501.1| RNA binding protein (Arp) [Aspergillus kawachii IFO 4308]
Length = 612
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 9 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHHESVLVKPV-N 63
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 64 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 123
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + P Y +R +L+
Sbjct: 124 PREARDKAVVLPAYLQHSRTFDLRT 148
>gi|308067866|ref|YP_003869471.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus polymyxa E681]
gi|305857145|gb|ADM68933.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Paenibacillus polymyxa E681]
Length = 230
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 134 EFQYFVVIDFEATCDKDKNPYPQEIIEFPSV-IVSSVTGQLEA-CFQTYVRPTCNQLLSD 191
E QY ++ D E T ++ Y EII+ +V +V G A F ++VRP+ +LS
Sbjct: 7 EMQY-IIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLST 64
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 251
TGI Q +D EA+ + WL ++ + + W D R L S CR
Sbjct: 65 DTVQFTGITQRDIDAAPLFPEAVKQFVTWLGT----DSPYYLCAWGP-DDRQKLVSHCRT 119
Query: 252 KKIWKPPYFNRWINLKVPFHEVF---GGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
+ + + +++ + G R +L +A+E+ + + G+ H LDDA NTA
Sbjct: 120 HHV-DLGWIHNTNDIQKQISRLLSSNGKYRQLSLSQALELCNIDFDGQQHRALDDAVNTA 178
Query: 308 RLL 310
++
Sbjct: 179 QVF 181
>gi|317027139|ref|XP_001400207.2| RNA binding protein (Arp) [Aspergillus niger CBS 513.88]
Length = 612
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 9 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHHESVLVKPV-N 63
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + + I KN FA VT +WD RV L
Sbjct: 64 TPITPLCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQL 123
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + P Y +R +L+
Sbjct: 124 PREARDKAVVLPAYLQHSRTFDLRT 148
>gi|156063312|ref|XP_001597578.1| hypothetical protein SS1G_01772 [Sclerotinia sclerotiorum 1980]
gi|154697108|gb|EDN96846.1| hypothetical protein SS1G_01772 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 626
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + T V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKTCDELHRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F+ VT +WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRTAGTFRDAINRFDTFAAEHLTSQNLDFSFVTLDSWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKV 268
R K + PPY +R +L+
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRT 150
>gi|402082047|gb|EJT77192.1| asparagine-rich protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 624
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Query: 132 PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
P +VVI TCD KD E+IE +++ + T + V+P
Sbjct: 10 PFAVDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKTLEELHRESVLVKPV 65
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRV 243
N ++ C LT + V T +A+ R D + E+ N +F VT+ WD RV
Sbjct: 66 -NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSTNLDFVFVTFEAWDLRV 124
Query: 244 MLESECRFKKIWKPPYF--NRWINLKVPFHE 272
L E R K + PPY +R +L+ +
Sbjct: 125 QLPREARDKTVVLPPYLQHSRTFDLRTEYQR 155
>gi|187932518|ref|YP_001886209.1| exonuclease [Clostridium botulinum B str. Eklund 17B]
gi|187720671|gb|ACD21892.1| exonuclease, RNase T and DNA polymerase III [Clostridium botulinum
B str. Eklund 17B]
Length = 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EII+ +V +++ ++ + F ++PT + + F KDLT I V+ S+
Sbjct: 26 EIIQIGAVKLNN-KLEIVSTFNRLIKPTVHTEIHPFIKDLTQITTEMVNSEKHFSDVYND 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWI---NLKVPFHEV 273
K++ NK F V W D + +L++ +F + + ++I NL + +
Sbjct: 85 FIKFIGNK-----EFTVCIWGTSDIKELLKN-VKFHNLKEIDDLRKYIDVQNLASKYIKT 138
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
G + LK A+E L + H +DA TA++ L K SI N+
Sbjct: 139 PKGTKVGLKTAIEFFNLPIEKEFHDAFNDAYYTAQIFKKLYTSKIKSSIYNN 190
>gi|423396139|ref|ZP_17373340.1| hypothetical protein ICU_01833 [Bacillus cereus BAG2X1-1]
gi|423407019|ref|ZP_17384168.1| hypothetical protein ICY_01704 [Bacillus cereus BAG2X1-3]
gi|401652622|gb|EJS70177.1| hypothetical protein ICU_01833 [Bacillus cereus BAG2X1-1]
gi|401659594|gb|EJS77078.1| hypothetical protein ICY_01704 [Bacillus cereus BAG2X1-3]
Length = 281
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIDTSTMKIIGEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQ---------FIGEDSIFVSWGTEDYR-FLSHDCTLYG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA+
Sbjct: 114 VECPCMEKESRFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAK 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|302911266|ref|XP_003050455.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731392|gb|EEU44742.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 627
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANSLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|347832764|emb|CCD48461.1| hypothetical protein [Botryotinia fuckeliana]
Length = 629
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + T V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKTCDELHRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F+ VT +WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRTAGTFRDAINRFDTFAAEHLTSQNLDFSFVTLDSWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKV 268
R K + PPY +R +L+
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRT 150
>gi|229174198|ref|ZP_04301733.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus MM3]
gi|228609319|gb|EEK66606.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus MM3]
Length = 281
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKEDLIGVEKFPQIIEKFIQ---------FIGEDSVFVSWGREDYR-FLSHDCTLHG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|396492219|ref|XP_003843744.1| hypothetical protein LEMA_P013950.1 [Leptosphaeria maculans JN3]
gi|312220324|emb|CBY00265.1| hypothetical protein LEMA_P013950.1 [Leptosphaeria maculans JN3]
Length = 617
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 131 QPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRP 183
Q +VVI TCD KD E+IE +++ + + + V+P
Sbjct: 10 QAPNLDLYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP 65
Query: 184 TCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCR 242
+ ++ C LT + QV + +A+ R + E+ KN FA VT +WD R
Sbjct: 66 V-HTPITALCTSLTTLTYDQVRNAGSFRDAIERFSAFASEHITPKNKEFAFVTLDSWDLR 124
Query: 243 VMLESECRFKKIWKPPYF--NRWINLKV 268
V L E R K + PPY +R +L+
Sbjct: 125 VQLPREARDKAVVLPPYLQHSRTFDLRT 152
>gi|169624527|ref|XP_001805669.1| hypothetical protein SNOG_15524 [Phaeosphaeria nodorum SN15]
gi|160705191|gb|EAT77189.2| hypothetical protein SNOG_15524 [Phaeosphaeria nodorum SN15]
Length = 606
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Query: 121 MLTPAHPYDFQPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQL 173
M + A P P ++VI TCD KD E+IE ++ L
Sbjct: 1 MASQATPSPAAPN-LDRYLVIHVATTCDEHGVYVTKDS----AEVIELGWIL-------L 48
Query: 174 EACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAV 233
+A ++ + N ++ C LT + QV + +A+ R + + KN FA
Sbjct: 49 DAKSESVLVKPVNTPITALCTSLTTLTWDQVRNAGSFRDAIERFTTFAQEH-TKNLEFAF 107
Query: 234 VTWSNWDCRVMLESECRFKKIWKPPYF--NRWINLKV 268
VT +WD RV L E R K + PPY +R +L+
Sbjct: 108 VTLDSWDLRVQLPREARDKAVVLPPYLQHSRTFDLRT 144
>gi|423477656|ref|ZP_17454371.1| hypothetical protein IEO_03114 [Bacillus cereus BAG6X1-1]
gi|402429291|gb|EJV61377.1| hypothetical protein IEO_03114 [Bacillus cereus BAG6X1-1]
Length = 281
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQ---------FIGEDSVFVSWGREDYR-FLSHDCTLYG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALSDAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|423458387|ref|ZP_17435184.1| hypothetical protein IEI_01527 [Bacillus cereus BAG5X2-1]
gi|401146808|gb|EJQ54318.1| hypothetical protein IEI_01527 [Bacillus cereus BAG5X2-1]
Length = 281
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQ---------FIGEDSVFVSWGREDYR-FLSHDCTLHG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|358389624|gb|EHK27216.1| hypothetical protein TRIVIDRAFT_34131 [Trichoderma virens Gv29-8]
Length = 621
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANSLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKW-LENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAISRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|167751276|ref|ZP_02423403.1| hypothetical protein EUBSIR_02262 [Eubacterium siraeum DSM 15702]
gi|167655783|gb|EDR99912.1| exonuclease [Eubacterium siraeum DSM 15702]
Length = 319
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EII+ +V V+ E F YVRP L K LTGI + + L+ L
Sbjct: 12 EIIQIGAVAVTDGIVS-EDFFSEYVRPRYYTELKGRIKKLTGITKNDLKNAHDLTVVLKS 70
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI---WKPPYFNRWINLKVPFHEV 273
KWLE G + +VTW D +++ +C F + W P W NL+
Sbjct: 71 FRKWLEKFG---KDVIIVTWGPDDIPTLVK-QCEFYERDTGWLP----EWFNLQPLMTRQ 122
Query: 274 FGGVRC--NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLA 311
+G R L+ AVE+ G+ + H ++DA TA +L
Sbjct: 123 YGIDRAQITLQSAVEITGVQQELDYHSAINDAYYTALVLT 162
>gi|188589093|ref|YP_001920974.1| exonuclease [Clostridium botulinum E3 str. Alaska E43]
gi|188499374|gb|ACD52510.1| exonuclease, RNase T and DNA polymerase III [Clostridium botulinum
E3 str. Alaska E43]
Length = 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
E+I+ +V ++S ++ + F ++PT + + F KDLT I V+ S+
Sbjct: 26 EVIQIGAVKLNS-NLEVVSTFNRLIKPTVHTEIHPFIKDLTQITTEMVNSEKYFSDV--- 81
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWI---NLKVPFHEV 273
+D ++ K I N F V W D + +L++ +F + + ++I NL + +
Sbjct: 82 YDDFI--KFIGNKEFTVCIWGTSDIKELLKN-VKFHNLEEIYDLRKYIDVQNLASKYIKT 138
Query: 274 FGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 325
G + LK A+E L + H +DA TA++ L K S N+
Sbjct: 139 QKGTKVGLKAAIEFFNLPIEKEFHDAFNDAYYTAQIFKKLYTSKVKSSTYNN 190
>gi|374985781|ref|YP_004961276.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
bingchenggensis BCW-1]
gi|297156433|gb|ADI06145.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
bingchenggensis BCW-1]
Length = 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 135 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+V+D EATC P EIIE + TG+ VRP + +S F
Sbjct: 6 LDRILVVDVEATCWDGPAPEGMESEIIEIGLCELDVATGERPVRRSLMVRPE-HSTVSPF 64
Query: 193 CKDLTGIQQIQVDRGVTLSEA--LLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECR 250
C +LT I Q G+ +EA +LR + G + +A +W +D R +
Sbjct: 65 CTELTTITPEQAAAGIGFAEACEILR-----DEHGAGHRVWA--SWGEYD-RAQFTRQSS 116
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFGGVR-CNLKEAVEMAGLAWQGRAHCGLDDAKN 305
I + P+ R +N+K + + R + A+ AGL+ +G H G+DDA N
Sbjct: 117 ATNI-RYPFGTRHLNVKNLYSLMHSLDRELGMAGALSHAGLSLEGTHHRGVDDAWN 171
>gi|384937691|ref|ZP_10029387.1| DNA polymerase III PolC [Mycoplasma canis UF31]
gi|384394597|gb|EIE41037.1| DNA polymerase III PolC [Mycoplasma canis UF31]
Length = 1441
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 31 QYNNGNSVELKDDTIVHPGGDAGESIHQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDS 90
Q N NS +K D I+ D E I + + VE + N S F +
Sbjct: 290 QSNYQNSKIVKVDKIIPTSFDKKEKIDEYPEKRVELN--IKTNMNAMDGLLDPSAFVNIA 347
Query: 91 QKVHH---CQMNSFESQFYPF--PVENRFQFAP-----YNMLTPAHPY---DFQPQEFQ- 136
+K +H M+S Q YP + P ++++ + DF+ Q+
Sbjct: 348 KKFNHKALAIMDSVSCQSYPAFASAAKKAGIKPIYGVSFDVIDKGNMVFLTDFENQKISE 407
Query: 137 -YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+VV D E T +P +IIEF + I+ + GQ+ Q +++P + LSDF +
Sbjct: 408 ASYVVFDLETT---SLSPKIGDIIEFGASIIEN--GQIVDSVQFFIKP--REKLSDFTIN 460
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
LT I V+ G+ + EAL R K L+NK AV +N+D +L+
Sbjct: 461 LTKITNEMVENGIEIEEALDRIFKILDNK------VAVAHNANFDMHFLLQ 505
>gi|322696205|gb|EFY88001.1| RNA binding protein (Arp), putative [Metarhizium acridum CQMa 102]
Length = 623
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANSLEEITHESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENK-GIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + + KN +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAISRFDTFATDYLTSKNLDFVFVTLDAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF--NRWINLKVPF 270
R K + PPY +R +L+ +
Sbjct: 129 RDKAVVLPPYLQHSRTFDLRTEY 151
>gi|423401706|ref|ZP_17378879.1| hypothetical protein ICW_02104 [Bacillus cereus BAG2X1-2]
gi|401653084|gb|EJS70635.1| hypothetical protein ICW_02104 [Bacillus cereus BAG2X1-2]
Length = 281
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQ---------FIGEDSVFVSWGREDYR-FLSHDCTLYG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAN 172
Query: 309 LL 310
+L
Sbjct: 173 IL 174
>gi|452964265|gb|EME69309.1| inhibitor of the KinA pathway to sporulation [Magnetospirillum sp.
SO-1]
Length = 208
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 156 QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDR-GVTLSEAL 214
+E+++ +V + ++T + + VRP N +LSD+ KDLTGI+Q +VDR G+ L EAL
Sbjct: 50 RELVQVGAVKLDALTLEETDRLELMVRPRFNPVLSDYFKDLTGIKQSRVDREGLDLPEAL 109
Query: 215 LRHDKWLENKGIKNTN 230
R ++ +G +N
Sbjct: 110 DRFATFMTPEGWGASN 125
>gi|419705654|ref|ZP_14233190.1| DNA polymerase III PolC [Mycoplasma canis UFG4]
gi|384396044|gb|EIE42467.1| DNA polymerase III PolC [Mycoplasma canis UFG4]
Length = 1441
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 31 QYNNGNSVELKDDTIVHPGGDAGESIHQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDS 90
Q N NS +K D I+ D E I + + VE + N S F +
Sbjct: 290 QSNYQNSKIVKVDKIIPTSFDKKEKIDEYPEKRVELN--IKTNMNAMDGLLDPSAFVNIA 347
Query: 91 QKVHH---CQMNSFESQFYPF--PVENRFQFAP-----YNMLTPAHPY---DFQPQEFQ- 136
+K +H M+S Q YP + P ++++ + DF+ Q+
Sbjct: 348 KKFNHKALAIMDSVSCQSYPAFASAAKKAGIKPIYGVSFDVIDKGNMVFLTDFENQKISE 407
Query: 137 -YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+VV D E T +P +IIEF + I+ + GQ+ Q +++P + LSDF +
Sbjct: 408 ASYVVFDLETT---SLSPKIGDIIEFGASIIEN--GQIVDSVQFFIKP--REKLSDFTIN 460
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
LT I V+ G+ + EAL R K L+NK AV +N+D +L+
Sbjct: 461 LTKITNEMVENGIEIEEALDRIFKILDNK------VAVAHNANFDMHFLLQ 505
>gi|427430589|ref|ZP_18920351.1| hypothetical protein C882_1774 [Caenispirillum salinarum AK4]
gi|425878558|gb|EKV27272.1| hypothetical protein C882_1774 [Caenispirillum salinarum AK4]
Length = 186
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQ--EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 192
+ +D E TC + P + EIIE V + + + VRP + +S+F
Sbjct: 7 LDRLLFVDLELTCWEGMPPPGEQSEIIEIGLAEVDAEALTVTRSGRYLVRPR-HSAVSEF 65
Query: 193 CKDLTGIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC-RVMLESECR 250
C DLTG+ Q V R G L+E K+ A W W R++L+
Sbjct: 66 CADLTGVTQDAVKRHGRPLAEVF--------GTLKKDWGPARKAWYAWGADRILLDEAVE 117
Query: 251 FKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
P+ + ++ + + G G R +L++A++ GL QGR H DA + A
Sbjct: 118 RGDAEAHPFSPGFFDMAQLYATLRGCGARVSLEDALKREGLEPQGRRHSAEGDAVDAA 175
>gi|367024785|ref|XP_003661677.1| hypothetical protein MYCTH_2133332 [Myceliophthora thermophila ATCC
42464]
gi|347008945|gb|AEO56432.1| hypothetical protein MYCTH_2133332 [Myceliophthora thermophila ATCC
42464]
Length = 617
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 132 PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
P + +VVI TCD KD E+IE +++ + T V+P
Sbjct: 8 PFKVDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANTLDELHRESVLVKPV 63
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRV 243
N ++ C LT + V T +A+ R D + E+ +N +F VT WD RV
Sbjct: 64 -NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVTLEAWDLRV 122
Query: 244 MLESECRFKKIWKPPYF 260
L E R K + PPY
Sbjct: 123 QLPREARDKSVVLPPYL 139
>gi|116199179|ref|XP_001225401.1| hypothetical protein CHGG_07745 [Chaetomium globosum CBS 148.51]
gi|88179024|gb|EAQ86492.1| hypothetical protein CHGG_07745 [Chaetomium globosum CBS 148.51]
Length = 626
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 132 PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 184
P + +VV+ TCD KD E+IE +++ + T + V+P
Sbjct: 8 PFKVDRYVVVHVATTCDEHGVYVTKDS----AEVIELGWILLDANTLEELHRESVLVKPV 63
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRV 243
N ++ C LT + V T +A+ R D + E+ +N +F VT WD RV
Sbjct: 64 -NTPITPLCTSLTTLTWEHVRNAGTFRDAVNRFDAFASEHLTSQNLDFVFVTLEAWDLRV 122
Query: 244 MLESECRFKKIWKPPYF 260
L E R K + PPY
Sbjct: 123 QLPREARDKSVVLPPYL 139
>gi|198472654|ref|XP_002133092.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
gi|198139107|gb|EDY70494.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
Length = 83
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 260 FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK 319
FN+WI+ + + + + + A+E L +QGRAH G+DDAKN L+ + G
Sbjct: 5 FNQWIDARDIYKKWYKYRPFSFDNALEHVMLTFQGRAHSGIDDAKNLGSLICKMFRDGAP 64
Query: 320 FSITNSL 326
FSIT L
Sbjct: 65 FSITKDL 71
>gi|302416745|ref|XP_003006204.1| asparagine-rich protein [Verticillium albo-atrum VaMs.102]
gi|261355620|gb|EEY18048.1| asparagine-rich protein [Verticillium albo-atrum VaMs.102]
Length = 311
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 138 FVVIDFEATCDKDK---NPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 194
+VVI TCD+ E+IE +++ + + + V+P N ++ C
Sbjct: 15 YVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEIVRDSALVKP-INTPITPLCT 73
Query: 195 DLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
LT + V T +A+ R D + E+ +N +F VT WD RV L E R K
Sbjct: 74 SLTTLTWEHVRNAGTFRDAVNRFDAFANEHLTSQNLDFVFVTLDAWDLRVQLPREARDKA 133
Query: 254 IWKPPYF--NRWINLKVPF 270
+ PPY +R +L+ +
Sbjct: 134 VVLPPYLQHSRTFDLRTEY 152
>gi|228986624|ref|ZP_04146755.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773109|gb|EEM21544.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 273
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
+ D E K+ P EI++ +V + + T ++ F V+P L+ LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 200 QQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
+ I V++ + E ++ N VTW D R L +C +
Sbjct: 59 TKKDLIGVEKFPQIIEKFVQ---------FIGENSIFVTWGKEDYR-FLSHDCTLHSVEC 108
Query: 257 PPY-FNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 109 PRMDKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANIL 166
>gi|423483165|ref|ZP_17459855.1| hypothetical protein IEQ_02943 [Bacillus cereus BAG6X1-2]
gi|401141938|gb|EJQ49488.1| hypothetical protein IEQ_02943 [Bacillus cereus BAG6X1-2]
Length = 284
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIDVSTMKVIGEFSELVKPSAP--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ N ++W D R L +C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQ---------FIGENSIFISWGKEDYR-FLSQDCTLHG 113
Query: 254 IW-----KPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ K F+ + + E+F +L+ AVE GL W+GR H L DA+NTA
Sbjct: 114 VECPCMEKESRFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGRQHRALADAENTAN 172
Query: 309 LL 310
+
Sbjct: 173 IF 174
>gi|429857771|gb|ELA32619.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSLEEITRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F VT WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKVPF 270
R K + PPY +R +L+ +
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRTEY 152
>gi|228947153|ref|ZP_04109447.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812400|gb|EEM58727.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 273
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 151 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQ---IQVDRG 207
K+ P EI++ +V + + T ++ F V+P L+ LTGI + I V++
Sbjct: 12 KSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGITKKDLIGVEKF 69
Query: 208 VTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP-PYFNRWINL 266
+ E +R + VTW D R L +C + P R I+L
Sbjct: 70 PQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHSVECPCMEKERRIDL 119
Query: 267 KV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 120 QKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHGALADAENTANIL 166
>gi|310794355|gb|EFQ29816.1| hypothetical protein GLRG_04960 [Glomerella graminicola M1.001]
Length = 618
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSLEEITRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F VT WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKV 268
R K + PPY +R +L+
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRT 150
>gi|261202824|ref|XP_002628626.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590723|gb|EEQ73304.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239612439|gb|EEQ89426.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327355244|gb|EGE84101.1| asparagine-rich protein [Ajellomyces dermatitidis ATCC 18188]
Length = 619
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ +VVI TCD KD E+IE +++ S + V+P N
Sbjct: 10 KLDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDSENCKELHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ + D + + + KN F+ VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAINQFDAFAQEHLLSKNLEFSFVTLDSWDMRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|452841585|gb|EME43522.1| hypothetical protein DOTSEDRAFT_45420 [Dothistroma septosporum
NZE10]
Length = 720
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 20/145 (13%)
Query: 135 FQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 187
F+ + +I TCD KD E+IE V+V + + E Q+ + N
Sbjct: 70 FEKYCIIHIATTCDEHGVYVTKDS----AEVIEIGWVVVDAQNTERELHRQSVLVRPVNT 125
Query: 188 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--------NKGIKNTNFAVVTWSNW 239
++ C LT + V + +A+ D + + G + T FA VT + W
Sbjct: 126 PITPLCTSLTTLTWEHVKNAGSFRDAIGTFDAFAREHLVPKDGDSGAQPT-FAFVTLTPW 184
Query: 240 DCRVMLESECRFKKIWKPPYFNRWI 264
D RV L E R K + PPY I
Sbjct: 185 DLRVQLPREARDKNVVLPPYLQHPI 209
>gi|367037635|ref|XP_003649198.1| hypothetical protein THITE_2107592 [Thielavia terrestris NRRL 8126]
gi|346996459|gb|AEO62862.1| hypothetical protein THITE_2107592 [Thielavia terrestris NRRL 8126]
Length = 614
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + T V+P N ++
Sbjct: 14 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANTLDELHRESVLVKPV-NTPIT 68
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ N +F VT WD RV L E
Sbjct: 69 PLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTTPNLDFVFVTLEAWDLRVQLPREA 128
Query: 250 RFKKIWKPPYF 260
R K + PPY
Sbjct: 129 RDKSVVLPPYL 139
>gi|171694045|ref|XP_001911947.1| hypothetical protein [Podospora anserina S mat+]
gi|170946971|emb|CAP73775.1| unnamed protein product [Podospora anserina S mat+]
Length = 619
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 125 AHPYDFQPQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACF 177
A P P +VVI TCD KD E+IE +++ + + L
Sbjct: 2 ATPQQTPPFRTDRYVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANSIDLHELH 57
Query: 178 Q--TYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVV 234
+ V+P N ++ C LT + V T +A+ R D + + N +F V
Sbjct: 58 RESVLVKPV-NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLLSNDLDFVFV 116
Query: 235 TWSNWDCRVMLESECRFKKIWKPPYF 260
T WD RV L E R K + PPY
Sbjct: 117 TLEAWDLRVQLPREARDKSVVLPPYL 142
>gi|353240743|emb|CCA72597.1| related to exonuclease, RNase T and DNA polymerase
III-Flavobacterium johnsoniae [Piriformospora indica DSM
11827]
Length = 221
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 138 FVVIDFEATCDKDKNPYP---QEIIEFPSVIVS--SVTGQLEACFQTYVRPTCNQLLSDF 192
+++D EATC + NP P EIIE +V SV + V+P +++ S F
Sbjct: 34 LLIVDLEATC-WETNPPPNQFHEIIEIGWALVDLESVPPRHVRSGTVLVKPVRSEV-SPF 91
Query: 193 CKDLTGIQQIQVD-RGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDC--RVMLESEC 249
C LT I +D GV+L EA + + + G K +WS+W R M++ +C
Sbjct: 92 CTKLTTITAELLDSEGVSLKEAF---ETLVSDVGSKE-----YSWSSWGAYDRNMIKRQC 143
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGL---AWQGRAHCGLDDAKNT 306
+ + + P+ N+K F E++ + A + +G H G DDAKN
Sbjct: 144 KVFGL-ESPFSPIHYNIKDLFKELYPNLNGGYGMTNAFAAVCDGPIEGTHHRGGDDAKNI 202
Query: 307 ARLLALLMHRGFKFSITN 324
+L L+ + +N
Sbjct: 203 GTILGKLIVKKRALEASN 220
>gi|229092500|ref|ZP_04223657.1| exonuclease [Bacillus cereus Rock3-42]
gi|228690905|gb|EEL44679.1| exonuclease [Bacillus cereus Rock3-42]
Length = 205
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 151 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQ---IQVDRG 207
K+ P EI++ +V + + T ++ F V+P L+ LTGI + I V++
Sbjct: 12 KSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGITKKDLIGVEKF 69
Query: 208 VTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP-PYFNRWINL 266
+ E +R + VTW D R L +C + P R I+L
Sbjct: 70 PQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHSVECPCMEKERRIDL 119
Query: 267 KV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 120 QKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|380487400|emb|CCF38064.1| hypothetical protein CH063_09255 [Colletotrichum higginsianum]
Length = 619
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSLEEITRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F VT WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKV 268
R K + PPY +R +L+
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRT 150
>gi|346974247|gb|EGY17699.1| asparagine-rich protein [Verticillium dahliae VdLs.17]
Length = 628
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSLEEIVRDSALVKPI-NTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ +N +F VT WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRNAGTFRDAVNRFDAFANEHLTSQNLDFVFVTLDAWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKVPFHE 272
R K + PPY +R +L+ +
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|270000543|ref|NP_845863.2| exonuclease [Bacillus anthracis str. Ames]
gi|386737289|ref|YP_006210470.1| Exonuclease family protein [Bacillus anthracis str. H9401]
gi|269850303|gb|AAP27349.2| exonuclease family protein [Bacillus anthracis str. Ames]
gi|384387141|gb|AFH84802.1| Exonuclease family protein [Bacillus anthracis str. H9401]
Length = 273
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
+ D E K+ P EI++ +V + + T ++ F V+P L+ LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 200 QQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 256
+ I V++ + E +R + VTW D R L +C +
Sbjct: 59 TKKDLIGVEKFPQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHSVEC 108
Query: 257 P-PYFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
P R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 109 PCMEKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|228916151|ref|ZP_04079721.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228934812|ref|ZP_04097643.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229123054|ref|ZP_04252261.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
95/8201]
gi|228660348|gb|EEL15981.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
95/8201]
gi|228824712|gb|EEM70513.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228843349|gb|EEM88427.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 273
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 151 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQ---IQVDRG 207
K+ P EI++ +V + + T ++ F V+P L+ LTGI + I V++
Sbjct: 12 KSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGITKKDLIGVEKF 69
Query: 208 VTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP-PYFNRWINL 266
+ E +R + VTW D R L +C + P R I+L
Sbjct: 70 PQIIEKFIR---------FIGEDSIFVTWGKEDYR-FLSHDCTLHSVECPCMEKERRIDL 119
Query: 267 KV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 120 QKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|229197646|ref|ZP_04324367.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus m1293]
gi|228585835|gb|EEK43932.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus m1293]
Length = 273
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
+ D E K+ P EI++ +V + + T ++ F V+P L+ LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 200 QQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP-P 258
+ + + + R +++ I VTW D R L +C + P
Sbjct: 59 TKKDLMNVEKFPQIIERFIQFIGEDSI------FVTWGKEDYR-FLSHDCTLHAVECPCM 111
Query: 259 YFNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 112 EKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|340959826|gb|EGS21007.1| putative asparagine-rich protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 615
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
++VI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 16 YIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDANSLEELHRESILVKPV-NTPIT 70
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D ++ E+ +N +F VT WD RV L E
Sbjct: 71 PLCTSLTTLTWEHVRNAGTFRDAINRFDAFVNEHLTSQNLDFVFVTLEAWDLRVQLPREA 130
Query: 250 RFKKIWKPPYF 260
R K + PPY
Sbjct: 131 RDKSVVLPPYL 141
>gi|449298206|gb|EMC94223.1| hypothetical protein BAUCODRAFT_26398 [Baudoinia compniacensis UAMH
10762]
Length = 787
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 133 QEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQL-EACFQTYVRPT 184
Q F + VI TCD KD E+IE V+V++ L E Q+ +
Sbjct: 50 QPFDKYCVIHIATTCDEHGVYVTKDS----AEVIEIGWVVVNARDPSLPELHHQSVLVKP 105
Query: 185 CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE---NKGIKNTN----FAVVTWS 237
N ++ C LT + V T +A++ D + + + NTN FA VT +
Sbjct: 106 INTPITPLCTSLTTLTWEHVRNAGTFRDAIMAFDTYAKEHLSPKDGNTNDPPPFAFVTLT 165
Query: 238 NWDCRVMLESECRFKKIWKPPYF 260
WD RV L E R K + P Y
Sbjct: 166 PWDLRVQLPREARDKNVVLPAYL 188
>gi|423562068|ref|ZP_17538344.1| hypothetical protein II5_01472 [Bacillus cereus MSX-A1]
gi|401200955|gb|EJR07833.1| hypothetical protein II5_01472 [Bacillus cereus MSX-A1]
Length = 281
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIKIGTMKIIEEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKEDLIGVEKFPQIVEKFIQ---------FIGEDCIFVSWGKEDYR-FLSHDCALHG 113
Query: 254 IWKPPYF--NRWINLKVPFH---EVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTAR 308
+ P NR K+ F E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPSIEKENRIDLQKLVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAN 172
Query: 309 LLALL-----MHRGFKFSITNSLMWQTNDGSLT 336
+L + +H+ +K + + DG LT
Sbjct: 173 ILLKVYSERDIHKRYK---RHGELELVKDGKLT 202
>gi|400601008|gb|EJP68676.1| centractin (ARP1) [Beauveria bassiana ARSEF 2860]
Length = 612
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 136 QYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+ +VVI TCD+ V V+ + ++ ++ + N ++ C
Sbjct: 12 ERYVVIHVATTCDEH------------GVYVTKDSAEI--THESVLVKPVNTPITPLCTS 57
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 254
LT + V T +A+ R D + E KN +FA VT WD RV L E R K +
Sbjct: 58 LTTLTWEHVRNAGTFRDAISRFDAFATEYLTSKNLDFAFVTLDAWDLRVQLPREARDKAV 117
Query: 255 WKPPYF--NRWINLKV 268
PPY +R +L+
Sbjct: 118 VLPPYLQHSRTFDLRT 133
>gi|238927543|ref|ZP_04659303.1| possible exonuclease [Selenomonas flueggei ATCC 43531]
gi|238884825|gb|EEQ48463.1| possible exonuclease [Selenomonas flueggei ATCC 43531]
Length = 219
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 157 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 216
EIIE +V ++ Q E FQ YV P ++ +LTGI Q +V +++
Sbjct: 27 EIIEIGAVRLNEDFVQ-EDEFQCYVCPEYG-MVKKHITELTGITQEKVAGHPAFADSFHA 84
Query: 217 HDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFN------RWINLKVPF 270
W I + +WS D + L ECR K P F+ RW++L+ F
Sbjct: 85 FVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK----LPDFDVTWLDTRWVDLQQEF 134
Query: 271 HEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 313
+ G LK A+ G ++G H L DA NT+ +LAL+
Sbjct: 135 DDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNTSAVLALM 178
>gi|425772635|gb|EKV11032.1| RNA binding protein (Arp), putative [Penicillium digitatum PHI26]
gi|425775118|gb|EKV13402.1| RNA binding protein (Arp), putative [Penicillium digitatum Pd1]
Length = 620
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + T + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKTCEELHRESVLVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVML 245
++ C LT + V T +A+ R D + E+ K+ FA VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWEHVRSAGTFRDAISRFDAFAQEHLTSKHLEFAFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + P Y +R +L+
Sbjct: 125 PREARDKAVVLPAYLQHSRTFDLRT 149
>gi|423441757|ref|ZP_17418663.1| hypothetical protein IEA_02087 [Bacillus cereus BAG4X2-1]
gi|423448019|ref|ZP_17424898.1| hypothetical protein IEC_02627 [Bacillus cereus BAG5O-1]
gi|423464830|ref|ZP_17441598.1| hypothetical protein IEK_02017 [Bacillus cereus BAG6O-1]
gi|423534172|ref|ZP_17510590.1| hypothetical protein IGI_02004 [Bacillus cereus HuB2-9]
gi|423540561|ref|ZP_17516952.1| hypothetical protein IGK_02653 [Bacillus cereus HuB4-10]
gi|401130430|gb|EJQ38099.1| hypothetical protein IEC_02627 [Bacillus cereus BAG5O-1]
gi|401174096|gb|EJQ81308.1| hypothetical protein IGK_02653 [Bacillus cereus HuB4-10]
gi|402416589|gb|EJV48905.1| hypothetical protein IEA_02087 [Bacillus cereus BAG4X2-1]
gi|402419267|gb|EJV51547.1| hypothetical protein IEK_02017 [Bacillus cereus BAG6O-1]
gi|402463142|gb|EJV94844.1| hypothetical protein IGI_02004 [Bacillus cereus HuB2-9]
Length = 281
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLR---HDKWLENKGIKNTNFAVVTWSNWDCRVM-LESEC 249
TGI + I V++ + E ++ D + G ++ +F + DC + LE C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQFIGEDSVFISWGKEDYHFL-----SHDCTLHGLECPC 118
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA +
Sbjct: 119 ----MEKDSRFDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANI 173
Query: 310 L 310
L
Sbjct: 174 L 174
>gi|419705009|ref|ZP_14232551.1| DNA polymerase III PolC [Mycoplasma canis UFG1]
gi|384395870|gb|EIE42297.1| DNA polymerase III PolC [Mycoplasma canis UFG1]
Length = 1441
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 31 QYNNGNSVELKDDTIVHPGGDAGESIHQLSSEFVEYSNEFYNNPTYQHDFGSWSTFYPDS 90
Q N NS +K D I+ D E I + + VE + N S F +
Sbjct: 290 QSNYQNSKIVKVDKIIPTSFDKKEKIDEYPEKRVELN--IKTNMNAMDGLLDPSAFVNIA 347
Query: 91 QKVHH---CQMNSFESQFYPF--PVENRFQFAP-----YNMLTPAHPY---DFQPQEFQ- 136
+K +H M+S Q YP + P ++++ + DF+ Q+
Sbjct: 348 KKFNHKALAIMDSVSCQSYPAFASAAKKAGIKPIYGVSFDVIDKGNMVFLTDFENQKISE 407
Query: 137 -YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKD 195
+VV D E T +P +IIEF + I+ + GQ+ Q +++P + LSDF +
Sbjct: 408 ASYVVFDLETT---SLSPKIGDIIEFGASIIEN--GQIVDSVQFFIKP--REKLSDFTIN 460
Query: 196 LTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLE 246
LT I V G+ + EAL R K L+NK AV +N+D +L+
Sbjct: 461 LTKITNEMVKNGIEIEEALDRIFKILDNK------VAVAHNANFDMHFLLQ 505
>gi|339244387|ref|XP_003378119.1| exonuclease [Trichinella spiralis]
gi|316972997|gb|EFV56636.1| exonuclease [Trichinella spiralis]
Length = 262
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 20/118 (16%)
Query: 257 PPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL------L 310
P WI+LK F ++ L E +++ GL ++ HCG+DDAKN +R+ L
Sbjct: 129 PKELRSWIDLKKAFSDILRVNLLKLSEMLDVIGLHFECTKHCGMDDAKNISRIVIWLSEL 188
Query: 311 ALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPPHQLHKQMDLDGSEAWTKTRE 368
+ + + K S + +D +N F PP D +GS KT E
Sbjct: 189 KIFLQKNAKLSKNGKFSMKLSDN---YNNFKT----PP-------DDNGSSFSLKTEE 232
>gi|320590733|gb|EFX03176.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 616
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 32/207 (15%)
Query: 132 PQEFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQ--TYVR 182
P +VVI TCD KD E+IE +++ + LE ++ V+
Sbjct: 8 PLSIDRYVVIHVATTCDEHGVYVTKDS----AEVIEIGWILLDA--KNLEELYRESVLVK 61
Query: 183 PTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDC 241
P N ++ C LT + V T +A+ R D + E+ ++ +F VT WD
Sbjct: 62 PI-NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQSLDFVFVTLDAWDL 120
Query: 242 RVMLESECRFKKIWKPPYF--NRWINLKVPFHE---------VFG-GVRCNLKEAVEMAG 289
RV L E R K + PPY +R +L+ + FG N+ A+E
Sbjct: 121 RVQLPREARDKAVVLPPYLQHSRTFDLRQEYQRWQQHHPESLPFGPSSLSNICAALEALA 180
Query: 290 LAWQGRAHCGLDDAKNTARLLALLMHR 316
A RA +++A AR+L L+ +
Sbjct: 181 PASPRRA---MEEAVTLARVLRGLIRK 204
>gi|423378703|ref|ZP_17355987.1| hypothetical protein IC9_02056 [Bacillus cereus BAG1O-2]
gi|423546793|ref|ZP_17523151.1| hypothetical protein IGO_03228 [Bacillus cereus HuB5-5]
gi|423623416|ref|ZP_17599194.1| hypothetical protein IK3_02014 [Bacillus cereus VD148]
gi|401180297|gb|EJQ87459.1| hypothetical protein IGO_03228 [Bacillus cereus HuB5-5]
gi|401258585|gb|EJR64770.1| hypothetical protein IK3_02014 [Bacillus cereus VD148]
gi|401634350|gb|EJS52117.1| hypothetical protein IC9_02056 [Bacillus cereus BAG1O-2]
Length = 281
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + + T ++ F V+P L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLR---HDKWLENKGIKNTNFAVVTWSNWDCRVM-LESEC 249
TGI + I V++ + E ++ D + G ++ +F + DC + LE C
Sbjct: 64 TGITKKDLIGVEKFPQIIEKFIQFIGEDSVFISWGKEDYHFL-----SHDCTLHGLECPC 118
Query: 250 RFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARL 309
+ K F+ + + E+F +L+ AVE GL W+G+ H L DA+NTA +
Sbjct: 119 ----MEKDSRFDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANI 173
Query: 310 L 310
L
Sbjct: 174 L 174
>gi|229159168|ref|ZP_04287203.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus ATCC
4342]
gi|228624302|gb|EEK81094.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus ATCC
4342]
Length = 273
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 140 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 199
+ D E K+ P EI++ +V + + T ++ F V+P L+ LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 200 QQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPY 259
+ + + + + +++ I VTW D R L +C + P
Sbjct: 59 TKKDLIGVEKFPQIIEKFVQFIGESSI------FVTWGKEDYR-FLSHDCTLHSVECPRM 111
Query: 260 -FNRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 112 DKERRIDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALSDAENTANIL 166
>gi|406867105|gb|EKD20144.1| RNA binding protein (Arp) [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 634
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 138 FVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLS 190
+VVI TCD KD E+IE +++ + + + V+P N ++
Sbjct: 15 YVVIHVATTCDEHGVYVTKDS----AEVIELGWILLDAKSCEELHRESVLVKP-INTPIT 69
Query: 191 DFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVMLESEC 249
C LT + V T +A+ R D + E+ ++ +F+ VT +WD RV L E
Sbjct: 70 PLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQSLDFSFVTLDSWDLRVQLPREA 129
Query: 250 RFKKIWKPPYF--NRWINLKV 268
R K + PPY +R +L+
Sbjct: 130 RDKAVVLPPYLQHSRTFDLRT 150
>gi|229140142|ref|ZP_04268700.1| exonuclease [Bacillus cereus BDRD-ST26]
gi|228643228|gb|EEK99501.1| exonuclease [Bacillus cereus BDRD-ST26]
Length = 208
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 151 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTL 210
K+ P EI++ +V + + T ++ F V+P L+ LTGI + +
Sbjct: 12 KSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPGAR--LTRHTTKLTGITKKDLMNVEKF 69
Query: 211 SEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP-PYFNRWINLKV- 268
+ + R +++ I VTW D R L +C + P R I+L+
Sbjct: 70 PQIIERFIQFIGEDSI------FVTWGKEDYR-FLSHDCTLHGVECPCMEKERRIDLQKF 122
Query: 269 ---PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 310
+ E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 123 VFQAYEELFEHT-PSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|218898629|ref|YP_002447040.1| exonuclease [Bacillus cereus G9842]
gi|423359484|ref|ZP_17336987.1| hypothetical protein IC1_01464 [Bacillus cereus VD022]
gi|218544259|gb|ACK96653.1| exonuclease family protein [Bacillus cereus G9842]
gi|401083595|gb|EJP91852.1| hypothetical protein IC1_01464 [Bacillus cereus VD022]
Length = 281
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 31/214 (14%)
Query: 137 YFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDL 196
+F+V D E K+ P EI++ +V + T ++ F V+P+ L+ L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIKIGTMKIIEEFSELVKPSAR--LTRHTTKL 63
Query: 197 TGIQQ---IQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKK 253
TGI + I V++ + E ++ + V+W D R L +C
Sbjct: 64 TGITKEDLIGVEKFPQIVEKFIQ---------FIGEDCIFVSWGKEDYR-FLSHDCALHG 113
Query: 254 IWKPPYF--NRWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
+ P NR I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA
Sbjct: 114 VECPSIEKENR-IDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTA 171
Query: 308 RLLALL-----MHRGFKFSITNSLMWQTNDGSLT 336
+L + +H+ +K + + DG LT
Sbjct: 172 NILLKVYSERDIHKRYK---RHGELELVKDGKLT 202
>gi|251794793|ref|YP_003009524.1| exonuclease RNase T and DNA polymerase III [Paenibacillus sp.
JDR-2]
gi|247542419|gb|ACS99437.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus sp.
JDR-2]
Length = 264
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 138 FVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 197
++++D E K + P E+IE +V +++ Q + F + ++P L+ F K T
Sbjct: 3 YIILDIEFNGRKFASDLPMEVIEIGAVRLNADLQQTD-IFSSLIKPVYFSKLNSFIKKKT 61
Query: 198 GIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKP 257
GI Q ++D + WL+ + F + TW D + ++ + R K+
Sbjct: 62 GIPQEEIDIAPKFPRVIGEFINWLD----RGEPFMLFTWGGEDLKRIV-YDTRMHKLDDA 116
Query: 258 PYFNRWINLKVPFHEVFGGVR-------CNLKEAVEMAGLAWQGRAHCGLDDAKNTA 307
W+++ F + G +R +++ A+ L ++G AH LDDA TA
Sbjct: 117 ----FWLSMDT-FDLLKGYLRYKNITNDVSVEAALADLNLVFEGNAHRALDDAIMTA 168
>gi|268568198|ref|XP_002647968.1| Hypothetical protein CBG23882 [Caenorhabditis briggsae]
Length = 311
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 135 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL---EACFQTYVRPTCNQLLSD 191
F+ +++DF TC+++ YP EII+ SV V ++ +L + F +V P N +LS+
Sbjct: 9 FKNLLILDFNTTCEENNYVYPTEIIQM-SVSVLNIRDKLIREDQTFNRFVCPVINPVLSE 67
Query: 192 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLE 222
+C TGI Q ++ T + WL
Sbjct: 68 YCARKTGIDQNSINTADTFPVVYDQFVAWLR 98
>gi|242791658|ref|XP_002481802.1| RNA binding protein (Arp), putative [Talaromyces stipitatus ATCC
10500]
gi|218718390|gb|EED17810.1| RNA binding protein (Arp), putative [Talaromyces stipitatus ATCC
10500]
Length = 612
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 134 EFQYFVVIDFEATCD-------KDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 186
+ ++VI TCD KD E+IE +++ + V+P N
Sbjct: 10 KLDRYIVIHVATTCDEHGVYVTKDS----AEVIELGWILLDTKNCDELHRESILVKPV-N 64
Query: 187 QLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVML 245
++ C LT + V + +A+ R D + + I KN F+ VT +WD RV L
Sbjct: 65 TPITPLCTSLTTLTWENVRNAGSFRDAVNRFDAFAQEHLISKNLEFSFVTLDSWDLRVQL 124
Query: 246 ESECRFKKIWKPPYF--NRWINLKV 268
E R K + PPY +R +L+
Sbjct: 125 PREARDKAVVLPPYLQHSRTFDLRT 149
>gi|403372892|gb|EJY86355.1| hypothetical protein OXYTRI_15124 [Oxytricha trifallax]
Length = 635
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 160 EFPSVI------VSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQV-DRGVTLSE 212
+FP++I V++ T ++++ V+PT + TG+ ++ + ++G+TLSE
Sbjct: 45 DFPNIISIDWQVVNAKTMEVKSSESLIVKPTNISKIKAQTLLKTGVTELMLQEKGITLSE 104
Query: 213 ALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFH 271
AL + ++L + I +N +F ++T+ +W + L E K I P+F+++IN
Sbjct: 105 ALAKFTEFLFKELIMQNQSFQLITFGDWPLQYQLPIEATQKSIKLGPHFSQYINYMKLVL 164
Query: 272 EVFG 275
E++G
Sbjct: 165 ELYG 168
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,600,712,552
Number of Sequences: 23463169
Number of extensions: 280478398
Number of successful extensions: 490722
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 433
Number of HSP's that attempted gapping in prelim test: 488403
Number of HSP's gapped (non-prelim): 1235
length of query: 379
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 235
effective length of database: 8,980,499,031
effective search space: 2110417272285
effective search space used: 2110417272285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)