Your job contains 1 sequence.
>016970
MKGFREKAGASKCFSKSTPDTPNRSLASVGSELGSSETVKRLVTAGSMRRIHERVLGPSR
TGISSSTSDIWLLGVCHKIAQDEALGDAAGNNGLAEFNQDFSSRILISYRKGFDPIGDSK
ITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSI
HNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGER
GGAPVVCIDDASRHCSVFSKGQADWTPILLLVPLVLGLEKVNPRYIPTLRLTFTFPQSLG
IVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSID
PSLAIGFYCRDKGLLVTFE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016970
(379 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080447 - symbol:AT3G59950 species:3702 "Arabi... 1099 1.3e-113 2
TAIR|locus:2051754 - symbol:AT2G44140 "AT2G44140" species... 1093 8.9e-113 2
UNIPROTKB|Q2XPP4 - symbol:ATG4B "Cysteine protease ATG4B"... 1074 1.1e-108 1
ZFIN|ZDB-GENE-050522-430 - symbol:atg4a "ATG4 autophagy r... 415 7.8e-39 1
MGI|MGI:1913865 - symbol:Atg4b "autophagy related 4B, cys... 407 5.5e-38 1
ZFIN|ZDB-GENE-040917-3 - symbol:atg4b "ATG4 autophagy rel... 407 5.5e-38 1
UNIPROTKB|F1MJZ9 - symbol:ATG4B "Cysteine protease ATG4B"... 404 1.1e-37 1
UNIPROTKB|Q6PZ03 - symbol:ATG4B "Cysteine protease ATG4B"... 404 1.1e-37 1
UNIPROTKB|Q9Y4P1 - symbol:ATG4B "Cysteine protease ATG4B"... 403 1.5e-37 1
UNIPROTKB|Q6PZ05 - symbol:ATG4A "Cysteine protease ATG4A"... 394 1.3e-36 1
UNIPROTKB|F1LRG2 - symbol:Atg4b "Protein Atg4b" species:1... 394 1.3e-36 1
UNIPROTKB|Q8WYN0 - symbol:ATG4A "Cysteine protease ATG4A"... 393 1.7e-36 1
UNIPROTKB|A6QLH1 - symbol:ATG4A "ATG4 autophagy related 4... 390 3.5e-36 1
UNIPROTKB|E2RLY1 - symbol:ATG4A "Uncharacterized protein"... 386 9.2e-36 1
UNIPROTKB|Q5ZIW7 - symbol:ATG4A "Cysteine protease ATG4A"... 384 1.5e-35 1
UNIPROTKB|F1NW36 - symbol:ATG4B "Cysteine protease ATG4B"... 374 1.7e-34 1
UNIPROTKB|Q6PZ02 - symbol:ATG4B "Cysteine protease ATG4B"... 374 1.7e-34 1
UNIPROTKB|F5H7P2 - symbol:ATG4B "Cysteine protease ATG4B"... 371 3.6e-34 1
RGD|1596915 - symbol:Atg4al1 "autophagy related 4A, cyste... 369 5.8e-34 1
FB|FBgn0031298 - symbol:Atg4 "Autophagy-specific gene 4" ... 234 2.0e-32 2
UNIPROTKB|E1BS34 - symbol:ATG4C "Uncharacterized protein"... 240 5.0e-32 2
UNIPROTKB|H7BYM2 - symbol:ATG4A "Cysteine protease ATG4A"... 347 1.3e-31 1
UNIPROTKB|F1N5L1 - symbol:ATG4D "Uncharacterized protein"... 183 3.1e-31 3
MGI|MGI:2444308 - symbol:Atg4d "autophagy related 4D, cys... 178 4.3e-31 3
DICTYBASE|DDB_G0283753 - symbol:DDB_G0283753 species:4468... 209 4.6e-31 2
UNIPROTKB|F1PAF7 - symbol:ATG4B "Uncharacterized protein"... 341 5.4e-31 1
UNIPROTKB|F1S3M2 - symbol:ATG4D "Cysteine protease ATG4D"... 184 7.5e-31 3
UNIPROTKB|Q684M2 - symbol:ATG4D "Cysteine protease ATG4D"... 184 7.5e-31 3
UNIPROTKB|E2RDP2 - symbol:ATG4D "Uncharacterized protein"... 182 1.4e-30 3
UNIPROTKB|Q86TL0 - symbol:ATG4D "Cysteine protease ATG4D"... 183 1.7e-30 3
UNIPROTKB|F1S810 - symbol:ATG4C "Uncharacterized protein"... 226 6.7e-30 2
UNIPROTKB|E2R5A4 - symbol:ATG4C "Uncharacterized protein"... 224 1.0e-29 2
UNIPROTKB|F1MJ23 - symbol:ATG4C "Uncharacterized protein"... 221 1.6e-29 2
UNIPROTKB|Q96DT6 - symbol:ATG4C "Cysteine protease ATG4C"... 217 5.2e-29 2
RGD|1598323 - symbol:Atg4c "autophagy related 4C, cystein... 166 2.2e-28 3
MGI|MGI:2651854 - symbol:Atg4c "autophagy related 4C, cys... 168 2.3e-28 3
UNIPROTKB|F8WD71 - symbol:ATG4B "Cysteine protease ATG4B"... 314 3.9e-28 1
DICTYBASE|DDB_G0273553 - symbol:atg4-2 "peptidase C54 fam... 216 6.5e-28 3
DICTYBASE|DDB_G0273443 - symbol:atg4-1 "peptidase C54 fam... 216 6.5e-28 3
ZFIN|ZDB-GENE-040625-84 - symbol:atg4c "autophagy-related... 198 2.7e-27 2
UNIPROTKB|F1RXI5 - symbol:LOC100156732 "Uncharacterized p... 303 5.7e-27 1
ASPGD|ASPL0000035892 - symbol:AN3470 species:162425 "Emer... 185 1.0e-26 2
UNIPROTKB|Q523C3 - symbol:ATG4 "Cysteine protease ATG4" s... 194 3.7e-26 2
UNIPROTKB|C9JIK8 - symbol:ATG4B "Cysteine protease ATG4B"... 193 7.0e-26 2
UNIPROTKB|A6QQI5 - symbol:ATG4D "ATG4D protein" species:9... 183 4.3e-25 2
UNIPROTKB|K7GK67 - symbol:LOC100156732 "Uncharacterized p... 244 4.9e-24 2
UNIPROTKB|F1LX10 - symbol:F1LX10 "Uncharacterized protein... 270 1.8e-23 1
WB|WBGene00013595 - symbol:atg-4.1 species:6239 "Caenorha... 193 2.9e-23 2
UNIPROTKB|Q9NA30 - symbol:atg-4.1 "Protein ATG-4.1, isofo... 193 2.9e-23 2
POMBASE|SPAC19B12.08 - symbol:atg4 "Atg8 deconjugator Atg... 179 7.4e-21 2
UNIPROTKB|K7GPU1 - symbol:LOC100156732 "Uncharacterized p... 244 1.0e-20 1
UNIPROTKB|C9JQ72 - symbol:ATG4B "Cysteine protease ATG4B"... 235 9.7e-20 1
UNIPROTKB|K7GM02 - symbol:LOC100156732 "Uncharacterized p... 155 6.3e-19 2
FB|FBgn0038325 - symbol:CG6194 species:7227 "Drosophila m... 244 9.5e-19 2
UNIPROTKB|G5E979 - symbol:ATG4A "ATG4 autophagy related 4... 201 1.4e-18 2
UNIPROTKB|K7EJA5 - symbol:ATG4D "Cysteine protease ATG4D"... 160 1.9e-18 2
SGD|S000005167 - symbol:ATG4 "Conserved cysteine protease... 164 3.4e-17 3
UNIPROTKB|H7C2A6 - symbol:ATG4B "Cysteine protease ATG4B"... 209 1.1e-16 1
UNIPROTKB|K7EP43 - symbol:ATG4D "Cysteine protease ATG4D"... 168 1.2e-16 2
RGD|1309664 - symbol:Atg4b "autophagy related 4B, cystein... 203 5.3e-16 1
UNIPROTKB|F1P1T4 - symbol:F1P1T4 "Uncharacterized protein... 200 1.2e-15 1
UNIPROTKB|F5H3G3 - symbol:ATG4A "Cysteine protease ATG4A"... 151 4.5e-15 2
UNIPROTKB|K7ESM7 - symbol:ATG4D "Cysteine protease ATG4D"... 143 9.7e-14 2
UNIPROTKB|K7EPJ0 - symbol:ATG4D "ATG4 autophagy related 4... 176 5.7e-13 1
UNIPROTKB|K7ERK1 - symbol:ATG4D "Cysteine protease ATG4D"... 168 1.4e-12 2
UNIPROTKB|A6NGQ4 - symbol:ATG4C "Cysteine protease ATG4C"... 167 5.7e-12 1
UNIPROTKB|C9JC51 - symbol:ATG4C "Cysteine protease ATG4C"... 167 5.7e-12 1
CGD|CAL0001444 - symbol:orf19.2401 species:5476 "Candida ... 177 6.9e-12 2
UNIPROTKB|C9J3C0 - symbol:ATG4B "Cysteine protease ATG4B"... 146 1.2e-09 1
UNIPROTKB|C9JVD5 - symbol:ATG4B "Cysteine protease ATG4B"... 146 1.2e-09 1
UNIPROTKB|Q969K0 - symbol:ATG4D "Cysteine protease ATG4D"... 139 6.8e-09 1
UNIPROTKB|K7EMB9 - symbol:ATG4D "Cysteine protease ATG4D"... 122 4.9e-07 1
UNIPROTKB|C9J1C1 - symbol:ATG4B "Cysteine protease ATG4B"... 119 1.0e-06 1
UNIPROTKB|H7BZW5 - symbol:ATG4C "Cysteine protease ATG4C"... 115 2.9e-06 1
UNIPROTKB|K7EN30 - symbol:ATG4D "Cysteine protease ATG4D"... 95 6.3e-05 2
UNIPROTKB|K7EQ67 - symbol:ATG4D "Cysteine protease ATG4D"... 94 0.00055 1
>TAIR|locus:2080447 [details] [associations]
symbol:AT3G59950 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006914 "autophagy"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] UniProt:Q9M1Y0 Pfam:PF03416
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0005776
GO:GO:0006914 GO:GO:0006508 GO:GO:0005775 EMBL:AL138647 HSSP:Q9Y4P1
eggNOG:NOG239662 HOGENOM:HOG000007008 ProtClustDB:CLSN2685022
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AB073172 EMBL:AK226932 EMBL:AK220621 IPI:IPI00519628
IPI:IPI00846196 PIR:T47819 RefSeq:NP_001118859.1 RefSeq:NP_191554.1
UniGene:At.1165 UniGene:At.48785 ProteinModelPortal:Q9M1Y0
SMR:Q9M1Y0 STRING:Q9M1Y0 MEROPS:C54.A02 PaxDb:Q9M1Y0 PRIDE:Q9M1Y0
EnsemblPlants:AT3G59950.1 GeneID:825165 KEGG:ath:AT3G59950
TAIR:At3g59950 InParanoid:Q9M1Y0 OMA:HRMKIMN PhylomeDB:Q9M1Y0
Genevestigator:Q9M1Y0
Length = 477
Score = 1099 (391.9 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 199/330 (60%), Positives = 254/330 (76%)
Query: 43 VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFS 102
+ +G++RR +RVLGPSRTGISSSTS+IWLLGVC+KI++ F QDFS
Sbjct: 87 MASGAIRRFQDRVLGPSRTGISSSTSEIWLLGVCYKISEGESSEEADAGRVLAAFRQDFS 146
Query: 103 SRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDRE 162
S IL++YR+GF+PIGD+ TSDV WGCMLRS QML AQALLF RLGR WRK +P D +
Sbjct: 147 SLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRLGRSWRKKDSEPADEK 206
Query: 163 YVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGC 222
Y+EIL LFGD+E S FSIHNL+ AG++YGLAAGSWVGPYA+CRSWE+LAR + ET
Sbjct: 207 YLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSWESLARKNKEETDDKH 266
Query: 223 QSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVN 282
+S MA+++VSG EDGERGGAP++CI+D ++ C FS+G+ +W PI ++VN
Sbjct: 267 KSFSMAVHIVSGSEDGERGGAPILCIEDVTKTCLEFSEGETEWPPILLLVPLVLGLDRVN 326
Query: 283 PRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEAD 342
PRYIP+L TFTFPQSLGI+GGKPGASTYIVGVQE+ YLDPHDVQ V+ + K++ + D
Sbjct: 327 PRYIPSLIATFTFPQSLGILGGKPGASTYIVGVQEDKGFYLDPHDVQQVVTVKKENQDVD 386
Query: 343 TSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
TS+YH + +R++ L+S+DPSLA+GFYC+ K
Sbjct: 387 TSSYHCNTLRYVPLESLDPSLALGFYCQHK 416
Score = 42 (19.8 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1 MKGFREKAGASKCFSKSTPDTPN-RSLASVGSELGSSETVKRL 42
MK ++ SKC S ST + + S S+ S+ SS+ L
Sbjct: 1 MKAICDRFVPSKCSSSSTSEKRDISSPTSLVSDSASSDNKSNL 43
>TAIR|locus:2051754 [details] [associations]
symbol:AT2G44140 "AT2G44140" species:3702 "Arabidopsis
thaliana" [GO:0006914 "autophagy" evidence=ISS] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] Pfam:PF03416 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0015031 GO:GO:0005776 GO:GO:0006914 GO:GO:0006508
GO:GO:0005775 EMBL:AC004005 EMBL:AB073171 EMBL:AK227012
IPI:IPI00521369 IPI:IPI00541858 PIR:T00694 RefSeq:NP_850412.1
RefSeq:NP_973687.1 UniGene:At.48588 UniGene:At.75169 HSSP:Q9Y4P1
ProteinModelPortal:Q8S929 SMR:Q8S929 MEROPS:C54.A01 PaxDb:Q8S929
PRIDE:Q8S929 EnsemblPlants:AT2G44140.1 GeneID:819020
KEGG:ath:AT2G44140 TAIR:At2g44140 eggNOG:NOG239662
HOGENOM:HOG000007008 InParanoid:Q8S929 KO:K08342 OMA:PYRESST
PhylomeDB:Q8S929 ProtClustDB:CLSN2685022 Genevestigator:Q8S929
GO:GO:0019786 GO:GO:0016807 InterPro:IPR005078 PANTHER:PTHR22624
Uniprot:Q8S929
Length = 467
Score = 1093 (389.8 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 201/340 (59%), Positives = 259/340 (76%)
Query: 34 GSSETVKRL-VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXX 92
G + VKR+ + +G++RR ERVLGP+RTG+ S+TSD+WLLGVC+KI+
Sbjct: 74 GWTAFVKRVSMASGAIRRFQERVLGPNRTGLPSTTSDVWLLGVCYKISADENSGETDTGT 133
Query: 93 XXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR 152
DFSS+IL++YRKGF+P D+ TSDV WGCM+RSSQML AQALLFHRLGR W
Sbjct: 134 VLAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRLGRAWT 193
Query: 153 KPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALAR 212
K + P ++EY+E L FGDSE S FSIHNL+ AG +YGLAAGSWVGPYA+CR+WE+LA
Sbjct: 194 KKSELP-EQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLAC 252
Query: 213 CQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXX 272
+R +T Q+LPMA+++VSG EDGERGGAP++CI+DA++ C FSKGQ++WTPI
Sbjct: 253 KKRKQTDSKNQTLPMAVHIVSGSEDGERGGAPILCIEDATKSCLEFSKGQSEWTPIILLV 312
Query: 273 XXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVI 332
+ VNPRYIP+L TFTFPQS+GI+GGKPGASTYIVGVQE+ YLDPH+VQ V+
Sbjct: 313 PLVLGLDSVNPRYIPSLVATFTFPQSVGILGGKPGASTYIVGVQEDKGFYLDPHEVQQVV 372
Query: 333 NIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
+ K+ + DTS+YH +V+R++ L+S+DPSLA+GFYCRDK
Sbjct: 373 TVNKETPDVDTSSYHCNVLRYVPLESLDPSLALGFYCRDK 412
Score = 40 (19.1 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 1 MKGFREKAGASKCFSKSTPDTPNRSLASVGSELGSSETVKRLVTAGSMRRIHERVLGPSR 60
MK ++ +C S S DT ++S + S+ G S+ + ++ V P R
Sbjct: 1 MKALCDRFVPQQCSSSSKSDTHDKS--PLVSDSGPSDNKSKFTLWSNVFTSSSSVSQPYR 58
Query: 61 TGISSSTS 68
SSTS
Sbjct: 59 ---ESSTS 63
>UNIPROTKB|Q2XPP4 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:39946 "Oryza
sativa Indica Group" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005775 "vacuolar lumen" evidence=ISS] [GO:0005776 "autophagic
vacuole" evidence=ISS] [GO:0006914 "autophagy" evidence=ISS]
[GO:0016807 "cysteine-type carboxypeptidase activity" evidence=ISS]
[GO:0019786 "APG8-specific protease activity" evidence=ISS]
Pfam:PF03416 GO:GO:0015031 GO:GO:0005776 GO:GO:0006914
GO:GO:0006508 GO:GO:0005775 HSSP:Q9Y4P1 GO:GO:0019786 GO:GO:0016807
InterPro:IPR005078 PANTHER:PTHR22624 EMBL:DQ269984 EMBL:CM000129
ProteinModelPortal:Q2XPP4 MEROPS:C54.001 Gramene:Q2XPP4
eggNOG:COG5636 Uniprot:Q2XPP4
Length = 478
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 204/361 (56%), Positives = 255/361 (70%)
Query: 14 FSKSTPDTPNRSLASVGSELGSSETVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLL 73
F + N+S S ++R+V +GSM R LG S+ ++SD+W L
Sbjct: 56 FEAHQDSSANKSPKSSSGSYDWLRVLRRIVCSGSMWRF----LGTSKV---LTSSDVWFL 108
Query: 74 GVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRS 133
G C+K++ F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RS
Sbjct: 109 GKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRS 168
Query: 134 SQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLA 193
SQMLVAQAL+FH LGR WR+P +KP++ EY+ ILH+FGDSE FSIHNLLQAG +YGLA
Sbjct: 169 SQMLVAQALIFHHLGRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLA 228
Query: 194 AGSWVGPYAMCRSWEALARCQRAETGL--GCQSLPMAIYVVSGDEDGERGGAPVVCIDDA 251
AGSWVGPYAMCR+W+ L R R + + G +S PMA+YVVSGDEDGERGGAPVVCID A
Sbjct: 229 AGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVA 288
Query: 252 SRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTY 311
++ C F+KGQ+ W+PI +K+NPRYIP L+ TFTFPQSLGI+GGKPG STY
Sbjct: 289 AQLCCDFNKGQSTWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSLGILGGKPGTSTY 348
Query: 312 IVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRD 371
I GVQ++ A+YLDPH+VQ ++I D++EADTS+YH +R + LD IDPSLAIGFYCRD
Sbjct: 349 IAGVQDDRALYLDPHEVQMAVDIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRD 408
Query: 372 K 372
K
Sbjct: 409 K 409
>ZFIN|ZDB-GENE-050522-430 [details] [associations]
symbol:atg4a "ATG4 autophagy related 4 homolog A
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-050522-430
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201
HOVERGEN:HBG050536 OrthoDB:EOG4M91RH GeneTree:ENSGT00530000063000
EMBL:CU571325 EMBL:FP102106 EMBL:BC095617 IPI:IPI00483558
RefSeq:NP_001019605.1 UniGene:Dr.91549 SMR:Q4VBK1
Ensembl:ENSDART00000026666 GeneID:554140 KEGG:dre:554140
InParanoid:Q4VBK1 NextBio:20880699 Uniprot:Q4VBK1
Length = 375
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 96/279 (34%), Positives = 142/279 (50%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D SR+ +YRK F PIG + +SD GWGCMLR QM++AQAL+ LGR WR +K
Sbjct: 45 DVRSRLWFTYRKKFSPIGGTGPSSDAGWGCMLRCGQMILAQALICSHLGRDWRWDPEKHQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
+EY IL F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 105 PKEYQRILDCFLDKKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNS- 163
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHC-----SVFSKGQADWTPIXXXXXX 274
+++YV S D V I+D + C + S+ DW P+
Sbjct: 164 -------LSVYV-SMDN--------TVVIEDIKKLCVRADLQLQSQQPLDWRPLLLVIPL 207
Query: 275 XXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINI 334
+NP YI L+ F PQS G++GGKP + Y +G ++ IYLDPH Q ++
Sbjct: 208 RMGINSINPVYIQALKECFKMPQSCGVLGGKPNLAYYFIGFIDDELIYLDPHTTQQAVDT 267
Query: 335 GKDDLEADTSTYHSDVIRH-IHLDSIDPSLAIGFYCRDK 372
+ D ++H H + + S+DPS+A+GF+C+ +
Sbjct: 268 -ESGSAVDDQSFHCQRTPHRMKITSLDPSVALGFFCKSE 305
Score = 251 (93.4 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 54/142 (38%), Positives = 74/142 (52%)
Query: 70 IWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGC 129
+W+LG C+ + D SR+ +YRK F PIG + +SD GWGC
Sbjct: 26 VWILGACYNVKTKKSELLS-----------DVRSRLWFTYRKKFSPIGGTGPSSDAGWGC 74
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM++AQAL+ LGR WR +K +EY IL F D + S +SIH + Q G
Sbjct: 75 MLRCGQMILAQALICSHLGRDWRWDPEKHQPKEYQRILDCFLDKKDSCYSIHQMAQMGVG 134
Query: 190 YGLAAGSWVGPYAMCRSWEALA 211
G + G W GP + + + LA
Sbjct: 135 EGKSVGEWYGPNTVAQVLKKLA 156
>MGI|MGI:1913865 [details] [associations]
symbol:Atg4b "autophagy related 4B, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006914
"autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=IDA;TAS] [GO:0008233 "peptidase activity" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=ISO;TAS]
[GO:0010508 "positive regulation of autophagy" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=ISO] MGI:MGI:1913865
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0006914 GO:GO:0006508 GO:GO:0045732 GO:GO:0004197
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192
OrthoDB:EOG4JWVDK GeneTree:ENSGT00530000063000 EMBL:AJ504653
EMBL:AK028712 EMBL:AK031570 EMBL:AK075796 EMBL:AK088811
EMBL:BC027184 EMBL:AK129242 IPI:IPI00387185 RefSeq:NP_777363.1
UniGene:Mm.29087 ProteinModelPortal:Q8BGE6 SMR:Q8BGE6 STRING:Q8BGE6
PhosphoSite:Q8BGE6 PaxDb:Q8BGE6 PRIDE:Q8BGE6
Ensembl:ENSMUST00000027502 GeneID:66615 KEGG:mmu:66615
UCSC:uc007cej.1 InParanoid:Q8BGE6 NextBio:322176 Bgee:Q8BGE6
CleanEx:MM_ATG4B Genevestigator:Q8BGE6
GermOnline:ENSMUSG00000026280 Uniprot:Q8BGE6
Length = 393
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/283 (33%), Positives = 139/283 (49%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YR+ F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 105 PDSYFNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSS 163
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCID------DASRHCSVFSKGQ------ADWTP 267
L + M VV +E A + C D+ RHC+ F G + W P
Sbjct: 164 LAVH-IAMDNTVVM-EEIRRLCRANLPCAGAAALPTDSERHCNGFPAGAEVTNRPSAWRP 221
Query: 268 IXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHD 327
+ +N Y+ TL+ F PQSLG++GGKP ++ Y +G E IYLDPH
Sbjct: 222 LVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHT 281
Query: 328 VQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
QP + + D S + + + +DPS+A+GF+C+
Sbjct: 282 TQPAVELTDSCFIPDESFHCQHPPSRMGIGELDPSIAVGFFCK 324
>ZFIN|ZDB-GENE-040917-3 [details] [associations]
symbol:atg4b "ATG4 autophagy related 4 homolog B (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040917-3
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 eggNOG:NOG239662 HOGENOM:HOG000007008 OMA:PYRESST
InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
MEROPS:C54.003 OrthoDB:EOG4JWVDK EMBL:BC076463 IPI:IPI00491010
UniGene:Dr.89769 ProteinModelPortal:Q6DG88 SMR:Q6DG88 STRING:Q6DG88
Ensembl:ENSDART00000121558 GeneTree:ENSGT00530000063000
InParanoid:Q6DG88 Bgee:Q6DG88 Uniprot:Q6DG88
Length = 394
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/286 (33%), Positives = 140/286 (48%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR-KPLQKP 158
D +SR+ +YRK F PIG + TSD GWGCMLR QM++ +AL+ LGR W+ P Q+
Sbjct: 45 DVTSRLWFTYRKNFQPIGGTGPTSDTGWGCMLRCGQMILGEALICRHLGRDWKWSPGQRQ 104
Query: 159 FDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCR---------SWEA 209
EYV IL+ F D + S +SIH + Q G G + G W GP + + SW
Sbjct: 105 RP-EYVSILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDSWSR 163
Query: 210 LARCQRAETGLGCQSLPMAIYVVSGDEDGERGGA-----PVVCIDDASRHCSVFSKGQAD 264
LA + + + + D +RG P D C++ + A
Sbjct: 164 LAVHVAMDNTVVIEEIKRLCMPWL---DFDRGACAVSEEPREMNGDLEGACALAEEETAL 220
Query: 265 WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLD 324
W P+ +N YI L+ F PQSLG++GGKP ++ Y +G + IYLD
Sbjct: 221 WKPLVLLIPLRLGLSDINEAYIEPLKQCFMMPQSLGVIGGKPNSAHYFIGFVGDELIYLD 280
Query: 325 PHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
PH QP ++ +D D S + +H+ +DPS+A GF+C+
Sbjct: 281 PHTTQPAVDPSEDGHFPDDSYHCQHPPCRMHICELDPSIAAGFFCQ 326
>UNIPROTKB|F1MJZ9 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00704687 GeneTree:ENSGT00530000063000 EMBL:DAAA02009542
Ensembl:ENSBTAT00000020474 OMA:IPGALPM Uniprot:F1MJZ9
Length = 393
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 99/282 (35%), Positives = 135/282 (47%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
Y +L F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 105 PDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSA 163
Query: 220 LGCQSLPMAIYVVSGDEDGE-RGGAPVVCID----DASRHCSVFSKGQ------ADWTPI 268
L + M VV D R P + D+ RHC+ F G A W P+
Sbjct: 164 LAVH-VAMDNTVVMADIRRLCRSSLPCAGAEAFPADSERHCNGFPAGAEGGGRAAPWRPL 222
Query: 269 XXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDV 328
VN Y TL+ F PQSLG++GGKP ++ Y +G E IYLDPH
Sbjct: 223 VLLIPLRLGLADVNAAYAGTLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTT 282
Query: 329 QPVINIGKDDLEADTSTYHSD-VIRHIHLDSIDPSLAIGFYC 369
QP + D ++H + + +DPS+A+GF+C
Sbjct: 283 QPAV-AAADRCPVPDESFHCQHPPGRMSIAELDPSIAVGFFC 323
>UNIPROTKB|Q6PZ03 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOVERGEN:HBG050536 EMBL:AY570550 EMBL:AY570551
IPI:IPI00704687 IPI:IPI00704763 RefSeq:NP_001001170.1
UniGene:Bt.49066 ProteinModelPortal:Q6PZ03 SMR:Q6PZ03 STRING:Q6PZ03
MEROPS:C54.003 GeneID:408002 KEGG:bta:408002 CTD:23192
InParanoid:Q6PZ03 OrthoDB:EOG4JWVDK NextBio:20818622 Uniprot:Q6PZ03
Length = 393
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 99/282 (35%), Positives = 135/282 (47%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
Y +L F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 105 PDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSA 163
Query: 220 LGCQSLPMAIYVVSGDEDGE-RGGAPVVCID----DASRHCSVFSKGQ------ADWTPI 268
L + M VV D R P + D+ RHC+ F G A W P+
Sbjct: 164 LAVH-VAMDNTVVMADIRRLCRSSLPCAGAEAFPADSERHCNGFPAGAEGGGRAAPWRPL 222
Query: 269 XXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDV 328
VN Y TL+ F PQSLG++GGKP ++ Y +G E IYLDPH
Sbjct: 223 VLLIPLRLGLADVNAAYAGTLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTT 282
Query: 329 QPVINIGKDDLEADTSTYHSD-VIRHIHLDSIDPSLAIGFYC 369
QP + D ++H + + +DPS+A+GF+C
Sbjct: 283 QPAV-AAADRCPVPDESFHCQHPPGRMSIAELDPSIAVGFFC 323
>UNIPROTKB|Q9Y4P1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006508 "proteolysis" evidence=IDA] [GO:0008234
"cysteine-type peptidase activity" evidence=IDA] [GO:0006914
"autophagy" evidence=IGI] [GO:0000045 "autophagic vacuole assembly"
evidence=IGI] [GO:0010508 "positive regulation of autophagy"
evidence=IDA] [GO:0004175 "endopeptidase activity" evidence=IDA]
EMBL:AJ504652 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 GO:GO:0045732
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 EMBL:AB066215
EMBL:AB023160 EMBL:AK027332 EMBL:AK027462 EMBL:AK027763
EMBL:AK125277 EMBL:AL080168 EMBL:AC133528 EMBL:BC000719
IPI:IPI00554649 IPI:IPI00647200 IPI:IPI00746254 IPI:IPI00941681
IPI:IPI01018366 PIR:T12492 RefSeq:NP_037457.3 RefSeq:NP_847896.1
UniGene:Hs.283610 PDB:2CY7 PDB:2D1I PDB:2Z0D PDB:2Z0E PDB:2ZZP
PDBsum:2CY7 PDBsum:2D1I PDBsum:2Z0D PDBsum:2Z0E PDBsum:2ZZP
ProteinModelPortal:Q9Y4P1 SMR:Q9Y4P1 IntAct:Q9Y4P1
MINT:MINT-1414043 STRING:Q9Y4P1 PhosphoSite:Q9Y4P1 DMDM:296434400
PaxDb:Q9Y4P1 PRIDE:Q9Y4P1 DNASU:23192 Ensembl:ENST00000402096
Ensembl:ENST00000404914 Ensembl:ENST00000405546 GeneID:23192
KEGG:hsa:23192 UCSC:uc002wbu.3 UCSC:uc002wbv.3 UCSC:uc002wbw.3
GeneCards:GC02P242578 H-InvDB:HIX0180188 HGNC:HGNC:20790
HPA:CAB037195 MIM:611338 neXtProt:NX_Q9Y4P1 PharmGKB:PA134898340
BindingDB:Q9Y4P1 ChEMBL:CHEMBL1741221 ChiTaRS:ATG4B
EvolutionaryTrace:Q9Y4P1 GenomeRNAi:23192 NextBio:44679
ArrayExpress:Q9Y4P1 Bgee:Q9Y4P1 CleanEx:HS_ATG4B
Genevestigator:Q9Y4P1 GermOnline:ENSG00000168397 Uniprot:Q9Y4P1
Length = 393
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 97/283 (34%), Positives = 137/283 (48%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 105 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSS 163
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCID------DASRHCSVFSKGQ------ADWTP 267
L + M VV +E V C D+ RHC+ F G + W P
Sbjct: 164 LAVH-IAMDNTVVM-EEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRP 221
Query: 268 IXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHD 327
+ +N Y+ TL+ F PQSLG++GGKP ++ Y +G E IYLDPH
Sbjct: 222 LVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHT 281
Query: 328 VQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
QP + D S + + + +DPS+A+GF+C+
Sbjct: 282 TQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCK 324
>UNIPROTKB|Q6PZ05 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY570549 IPI:IPI00693458
RefSeq:NP_001001171.1 UniGene:Bt.13730 ProteinModelPortal:Q6PZ05
SMR:Q6PZ05 MEROPS:C54.002 GeneID:408003 KEGG:bta:408003 CTD:115201
HOVERGEN:HBG050536 InParanoid:Q6PZ05 OrthoDB:EOG4M91RH
NextBio:20818623 Uniprot:Q6PZ05
Length = 398
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 92/285 (32%), Positives = 143/285 (50%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEAL 210
+EY IL F D + +SIH + Q G G + G W GP A+ W +L
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 211 ARCQRAETGLGCQSLPMAIYVVS--GDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPI 268
A + + + + +S D ER P+ + AS S W P+
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRTLSLSADTPAER---PLESLT-ASNQSKGPSACCTAWKPL 223
Query: 269 XXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDV 328
++NP Y+ + F PQSLG +GGKP + Y +G + I+LDPH
Sbjct: 224 LLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTT 283
Query: 329 QPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
Q ++ +++ AD T+H + +++ ++DPS+A+GF+C+++
Sbjct: 284 QTFVDT-EENGTADDQTFHCLQPPQRMNILNLDPSVALGFFCKEE 327
>UNIPROTKB|F1LRG2 [details] [associations]
symbol:Atg4b "Protein Atg4b" species:10116 "Rattus
norvegicus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
RGD:1309664 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0000045
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:AVCFLCK IPI:IPI00363207
PRIDE:F1LRG2 Ensembl:ENSRNOT00000025529 ArrayExpress:F1LRG2
Uniprot:F1LRG2
Length = 394
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 95/283 (33%), Positives = 137/283 (48%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YR+ F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 46 DVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 105
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA +
Sbjct: 106 PDSYFSVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSS 164
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCIDDAS------RHCSVFSKGQA------DWTP 267
L + M VV +E A + C A+ RHC+ G W P
Sbjct: 165 LAVH-IAMDNTVVM-EEIRRLCRASLPCAGAAALSMESERHCNGLPAGAEVTNRPLAWRP 222
Query: 268 IXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHD 327
+ +N Y+ TL+ F PQSLG++GGKP ++ Y +G E IYLDPH
Sbjct: 223 LVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHT 282
Query: 328 VQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
QP + + D S + + + +DPS+A+GF+C+
Sbjct: 283 TQPAVELTDSCFIPDESFHCQHPPCRMGIGELDPSIAVGFFCK 325
>UNIPROTKB|Q8WYN0 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006508 "proteolysis" evidence=IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
EMBL:CH471120 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536
OrthoDB:EOG4M91RH EMBL:AJ504651 EMBL:AB066214 EMBL:AJ320508
EMBL:AJ320509 EMBL:AK314429 EMBL:AL031177 EMBL:BC041862
EMBL:BC061696 IPI:IPI00064708 IPI:IPI00292327 IPI:IPI00328880
IPI:IPI00640839 RefSeq:NP_443168.2 RefSeq:NP_840054.1
UniGene:Hs.8763 PDB:2FUY PDB:2P82 PDBsum:2FUY PDBsum:2P82
ProteinModelPortal:Q8WYN0 SMR:Q8WYN0 IntAct:Q8WYN0 STRING:Q8WYN0
DMDM:61211859 PaxDb:Q8WYN0 PRIDE:Q8WYN0 DNASU:115201
Ensembl:ENST00000345734 Ensembl:ENST00000372232
Ensembl:ENST00000372254 Ensembl:ENST00000457035 GeneID:115201
KEGG:hsa:115201 UCSC:uc004enr.3 UCSC:uc004ent.3
GeneCards:GC0XP107334 HGNC:HGNC:16489 HPA:HPA036374 MIM:300663
neXtProt:NX_Q8WYN0 PharmGKB:PA25184 InParanoid:Q8WYN0 OMA:DIKKMCC
PhylomeDB:Q8WYN0 EvolutionaryTrace:Q8WYN0 GenomeRNAi:115201
NextBio:79530 ArrayExpress:Q8WYN0 Bgee:Q8WYN0 Genevestigator:Q8WYN0
GermOnline:ENSG00000101844 Uniprot:Q8WYN0
Length = 398
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 90/285 (31%), Positives = 143/285 (50%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEAL 210
+EY IL F D + +SIH + Q G G + G W GP A+ W +L
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 211 ARCQRAETGLGCQSLPMAIYVV--SGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPI 268
A + + + + V+ S D G+R + + S+ S + W P+
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRPPDSLTA-SNQSKGTSAYCSA---WKPL 223
Query: 269 XXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDV 328
++NP Y+ + F PQSLG +GGKP + Y +G + I+LDPH
Sbjct: 224 LLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTT 283
Query: 329 QPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
Q ++ ++ D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 284 QTFVDTEENGTVND-QTFHCLQSPQRMNILNLDPSVALGFFCKEE 327
>UNIPROTKB|A6QLH1 [details] [associations]
symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
cerevisiae)" species:9913 "Bos taurus" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00693458 UniGene:Bt.13730
HOVERGEN:HBG050536 OMA:DIKKMCC GeneTree:ENSGT00530000063000
EMBL:DAAA02071498 EMBL:BC147962 SMR:A6QLH1
Ensembl:ENSBTAT00000018239 InParanoid:A6QLH1 Uniprot:A6QLH1
Length = 398
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 91/285 (31%), Positives = 142/285 (49%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEAL 210
+EY IL F D + +SIH + Q G G + G W GP A+ W +L
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 211 ARCQRAETGLGCQSLPMAIYVVS--GDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPI 268
A + + + + +S D ER P+ + AS S W P+
Sbjct: 168 AVYVSMDNTVVIEDIKKMCRTLSLSADTPAER---PLESLT-ASNQSKGPSACCTAWKPL 223
Query: 269 XXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDV 328
++NP Y+ + F PQSLG +GGKP + Y +G + I+LDPH
Sbjct: 224 LLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTT 283
Query: 329 QPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
Q ++ +++ D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 284 QTFVDT-EENGTVDDQTFHCLQPPQRMNILNLDPSVALGFFCKEE 327
>UNIPROTKB|E2RLY1 [details] [associations]
symbol:ATG4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:AAEX03026757
Ensembl:ENSCAFT00000028612 Uniprot:E2RLY1
Length = 399
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 91/286 (31%), Positives = 147/286 (51%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRP-WRKPLQKP 158
D +R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DIRARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGREDWSWEKQKE 107
Query: 159 FDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEA 209
REY IL F D + +SIH + Q G G + G W GP A+ W +
Sbjct: 108 QPREYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNS 167
Query: 210 LARCQRAETGLGCQSLPMAIYVV--SGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTP 267
LA + + + + V+ S D GE +P+ ++ +++ S + A W P
Sbjct: 168 LAIYVSMDNTVVIEDIKKMCCVLPLSADTIGE---SPLNTLNASNQSKSAPASCPA-WKP 223
Query: 268 IXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHD 327
+ ++NP Y+ + F PQSLG +GGKP + Y +G + I+LDPH
Sbjct: 224 LLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHT 283
Query: 328 VQPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
Q ++ +++ D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 284 TQTFVDT-EENGTVDDQTFHCLQSPQRMNILNLDPSVALGFFCKEE 328
>UNIPROTKB|Q5ZIW7 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
MEROPS:C54.002 CTD:115201 HOVERGEN:HBG050536 EMBL:AJ720667
IPI:IPI00596391 RefSeq:NP_001258916.1 RefSeq:XP_003641164.1
UniGene:Gga.53916 ProteinModelPortal:Q5ZIW7 SMR:Q5ZIW7
GeneID:772074 KEGG:gga:772074 InParanoid:Q5ZIW7 Uniprot:Q5ZIW7
Length = 380
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 89/282 (31%), Positives = 137/282 (48%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W+ K
Sbjct: 31 DVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQ 90
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
EY ILH F D + +SIH + Q G G + G W GP + + + LA +
Sbjct: 91 PEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 150
Query: 220 LGCQSLPMAIYVVSGDEDGERGG--APVVCIDDASRHCSVFSKGQ------ADWTPIXXX 271
S+ + V+ + R + A H S + + W P+
Sbjct: 151 AVYVSMDNTV-VIEDIKKMCRSPPQSSSTAHSSAHLHRSALGRNRNAAGLCTGWKPLLLI 209
Query: 272 XXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPV 331
+NP YI + F PQSLG +GGKP + Y +G IYLDPH Q
Sbjct: 210 IPLRLGINHINPVYIDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSF 269
Query: 332 INIGKDDLEADTSTYHSDVIRH-IHLDSIDPSLAIGFYCRDK 372
++ +++ D ++H H + + ++DPS+A+GF+C+++
Sbjct: 270 VD-SEENGTVDDQSFHCQQAPHRMKIMNLDPSVALGFFCKEE 310
>UNIPROTKB|F1NW36 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 IPI:IPI00576723 GeneTree:ENSGT00530000063000
OMA:AVCFLCK EMBL:AADN02024262 Ensembl:ENSGALT00000010179
Uniprot:F1NW36
Length = 391
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 91/280 (32%), Positives = 129/280 (46%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR K
Sbjct: 42 DVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQ 101
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQR---- 215
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA
Sbjct: 102 TDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSL 161
Query: 216 -AETGLGCQSLPMAIYVVSGDEDGERGGAPVVCID-DASRHCSVFSKGQAD----WTPIX 269
+ + I + G A ++ D + G D W P+
Sbjct: 162 AVHIAMDNTVVMEEIRRLCQSNFSCAGAAACPAVEADVLYNGYPEEAGVRDKLSLWKPLV 221
Query: 270 XXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQ 329
++N YI TL+ F PQSLG++GGKP ++ Y +G E IYLDPH Q
Sbjct: 222 LLIPLRLGLTEINEAYIETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQ 281
Query: 330 PVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYC 369
P + D S + + + +DPS+A+GF+C
Sbjct: 282 PAVEPSDSGCLPDESFHCQHPPCRMSIAELDPSIAVGFFC 321
>UNIPROTKB|Q6PZ02 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK
EMBL:AY570552 EMBL:AJ720212 IPI:IPI00576723 IPI:IPI00585227
RefSeq:NP_998738.1 UniGene:Gga.16354 ProteinModelPortal:Q6PZ02
SMR:Q6PZ02 STRING:Q6PZ02 GeneID:404750 KEGG:gga:404750
InParanoid:Q6PZ02 NextBio:20817710 Uniprot:Q6PZ02
Length = 393
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 91/280 (32%), Positives = 129/280 (46%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR K
Sbjct: 44 DVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQ 103
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQR---- 215
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA
Sbjct: 104 TDNYFSVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSL 163
Query: 216 -AETGLGCQSLPMAIYVVSGDEDGERGGAPVVCID-DASRHCSVFSKGQAD----WTPIX 269
+ + I + G A ++ D + G D W P+
Sbjct: 164 AVHIAMDNTVVMEEIRRLCQSNFSCAGAAACPAVEADVLYNGYPEEAGVRDKLSLWKPLV 223
Query: 270 XXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQ 329
++N YI TL+ F PQSLG++GGKP ++ Y +G E IYLDPH Q
Sbjct: 224 LLIPLRLGLTEINEAYIETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQ 283
Query: 330 PVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYC 369
P + D S + + + +DPS+A+GF+C
Sbjct: 284 PAVEPSDSGCLPDESFHCQHPPCRMSIAELDPSIAVGFFC 323
>UNIPROTKB|F5H7P2 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00937313
ProteinModelPortal:F5H7P2 SMR:F5H7P2 PRIDE:F5H7P2
Ensembl:ENST00000474739 UCSC:uc010zox.2 ArrayExpress:F5H7P2
Bgee:F5H7P2 Uniprot:F5H7P2
Length = 379
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 92/277 (33%), Positives = 132/277 (47%)
Query: 106 LISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVE 165
L S+R+ + G + TSD GWGCMLR QM+ AQAL+ LGR WR +K Y
Sbjct: 37 LASHRRRTEAGGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFS 96
Query: 166 ILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSL 225
+L+ F D + S +SIH + Q G G + G W GP + + + LA + L +
Sbjct: 97 VLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFD-TWSSLAVH-I 154
Query: 226 PMAIYVVSGDEDGERGGAPVVCID------DASRHCSVFSKGQ------ADWTPIXXXXX 273
M VV +E V C D+ RHC+ F G + W P+
Sbjct: 155 AMDNTVVM-EEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIP 213
Query: 274 XXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVIN 333
+N Y+ TL+ F PQSLG++GGKP ++ Y +G E IYLDPH QP +
Sbjct: 214 LRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVE 273
Query: 334 IGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
D S + + + +DPS+A+GF+C+
Sbjct: 274 PTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCK 310
>RGD|1596915 [details] [associations]
symbol:Atg4al1 "autophagy related 4A, cysteine peptidase-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008234 "cysteine-type
peptidase activity" evidence=ISO] RGD:1596915 Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOVERGEN:HBG050536 MEROPS:C54.006 EMBL:BC160890 IPI:IPI00767463
RefSeq:NP_001119770.1 UniGene:Rn.216396 ProteinModelPortal:B1H274
SMR:B1H274 GeneID:678769 KEGG:rno:678769 CTD:678769 NextBio:715090
Genevestigator:B1H274 Uniprot:B1H274
Length = 406
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 90/290 (31%), Positives = 140/290 (48%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEAL 210
+EY IL F D + +SIH + Q G G + G W GP A+ W +L
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNSL 167
Query: 211 ARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXX 270
A + + + + V+ G +P + +S+ + A W P+
Sbjct: 168 AVYVSMDNTVVIEDIKKMCCVLPVGAADTAGESPPDSLIASSQSKGTSAPCLA-WKPLLL 226
Query: 271 XXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQP 330
++NP YI + F PQSLG +GGKP + Y +G + I+LDPH Q
Sbjct: 227 IVPLRLGINQINPVYIEAFKECFKMPQSLGALGGKPNNAYYFIGSLGDELIFLDPHTTQT 286
Query: 331 VINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAI-------GFYCRDK 372
++ + L D T+H + + + ++DPS+A+ GF+C+++
Sbjct: 287 FVDTEESGL-VDDHTFHCLQSPQRMSILNLDPSVALVGQGAFMGFFCKEE 335
>FB|FBgn0031298 [details] [associations]
symbol:Atg4 "Autophagy-specific gene 4" species:7227
"Drosophila melanogaster" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0010506 "regulation of autophagy"
evidence=IMP] Pfam:PF03416 GO:GO:0005737 EMBL:AE014134
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AY058573 RefSeq:NP_608563.1
UniGene:Dm.13477 SMR:Q9VPW2 IntAct:Q9VPW2 MINT:MINT-754833
STRING:Q9VPW2 MEROPS:C54.A04 EnsemblMetazoa:FBtr0077953
GeneID:33283 KEGG:dme:Dmel_CG4428 UCSC:CG4428-RA CTD:33283
FlyBase:FBgn0031298 InParanoid:Q9VPW2 OMA:AVCFLCK OrthoDB:EOG4FXPQ5
GenomeRNAi:33283 NextBio:782843 Uniprot:Q9VPW2
Length = 411
Score = 234 (87.4 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 47/115 (40%), Positives = 71/115 (61%)
Query: 99 QDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR-KPLQK 157
+D SR+ +YR GF P+G+ ++T+D GWGCMLR QM++AQAL+ LGR W P +
Sbjct: 68 RDIQSRLWCTYRHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDCR 127
Query: 158 PFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALAR 212
D Y++I++ F D S +SIH + Q G++ A G W+GP + + + L R
Sbjct: 128 --DATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILKKLVR 180
Score = 174 (66.3 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 246 VCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGK 305
V +DD C +G W P+ +NP Y+P L+ S G++GG+
Sbjct: 197 VVLDDVYASCR---EG-GSWKPLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGR 252
Query: 306 PGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS---TYHSDVIRHIHLDSIDPS 362
P + Y +G ++ +YLDPH Q + + A+ TYH ++ ++DPS
Sbjct: 253 PNQALYFLGYVDDEVLYLDPHTTQRTGAVAQKTAAAEQDYDETYHQKHAARLNFSAMDPS 312
Query: 363 LAIGFYCR 370
LA+ F C+
Sbjct: 313 LAVCFLCK 320
>UNIPROTKB|E1BS34 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
CTD:84938 OMA:ICHFLGR EMBL:AADN02012479 IPI:IPI00590224
RefSeq:XP_422520.2 Ensembl:ENSGALT00000017894 GeneID:424688
KEGG:gga:424688 NextBio:20826988 Uniprot:E1BS34
Length = 459
Score = 240 (89.5 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 59/206 (28%), Positives = 93/206 (45%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQS 224
+I+ FGDS + F +H L++ GK G AG W GP + + R + E +
Sbjct: 199 KIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAH----ILR-KAVEEARDPEL 253
Query: 225 LPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPR 284
+ +YV +D V D R CS G+ D + E+ N
Sbjct: 254 QGVTVYVA---QD-----CTVYSSDVIDRQCSFMDSGETDTKAVIILVPVRLGGERTNMD 305
Query: 285 YIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS 344
Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D ++
Sbjct: 306 YLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLES- 364
Query: 345 TYHSDVIRHIHLDSIDPSLAIGFYCR 370
+H + + +DPS IGFYCR
Sbjct: 365 -FHCPSPKKMSFKKMDPSCTIGFYCR 389
Score = 165 (63.1 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLLAQGLMLHFLGRAWVWP 136
>UNIPROTKB|H7BYM2 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 ProteinModelPortal:H7BYM2 PRIDE:H7BYM2
Ensembl:ENST00000394892 Uniprot:H7BYM2
Length = 312
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 82/268 (30%), Positives = 131/268 (48%)
Query: 117 GDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETS 176
G + +SD GWGCMLR QM++AQAL+ LGR W QK +EY IL F D +
Sbjct: 38 GGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDC 97
Query: 177 PFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALARCQRAETGLGCQSLPM 227
+SIH + Q G G + G W GP A+ W +LA + + + +
Sbjct: 98 CYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 157
Query: 228 AIYVV--SGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRY 285
V+ S D G+R + + S+ S + W P+ ++NP Y
Sbjct: 158 MCRVLPLSADTAGDRPPDSLTA-SNQSKGTSAYCSA---WKPLLLIVPLRLGINQINPVY 213
Query: 286 IPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTST 345
+ + F PQSLG +GGKP + Y +G + I+LDPH Q ++ ++ D T
Sbjct: 214 VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVND-QT 272
Query: 346 YHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
+H + +++ ++DPS+A+GF+C+++
Sbjct: 273 FHCLQSPQRMNILNLDPSVALGFFCKEE 300
>UNIPROTKB|F1N5L1 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:DAAA02019466 UniGene:Bt.30691 IPI:IPI00854526
Ensembl:ENSBTAT00000014200 ArrayExpress:F1N5L1 Uniprot:F1N5L1
Length = 472
Score = 183 (69.5 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 293 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 352
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 353 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGDR 400
Score = 173 (66.0 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 111 FQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 165
Score = 93 (37.8 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 151 WRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
W + + +R + +I+ F D +PF +H L++ G+ G AG W GP
Sbjct: 198 WAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKKAGDWYGP 247
>MGI|MGI:2444308 [details] [associations]
symbol:Atg4d "autophagy related 4D, cysteine peptidase"
species:10090 "Mus musculus" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006914 "autophagy" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] MGI:MGI:2444308 Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 HOGENOM:HOG000294192
HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971 OMA:YGWAVKS
OrthoDB:EOG45MN5B EMBL:AJ312333 EMBL:AK036571 EMBL:AK081605
EMBL:AK081002 EMBL:BC030861 EMBL:BC069851 IPI:IPI00387190
RefSeq:NP_705811.8 UniGene:Mm.440165 ProteinModelPortal:Q8BGV9
SMR:Q8BGV9 PhosphoSite:Q8BGV9 PRIDE:Q8BGV9
Ensembl:ENSMUST00000065005 GeneID:235040 KEGG:mmu:235040
UCSC:uc009okt.1 InParanoid:Q8BGV9 NextBio:382473 Bgee:Q8BGV9
CleanEx:MM_ATG4D Genevestigator:Q8BGV9
GermOnline:ENSMUSG00000002820 Uniprot:Q8BGV9
Length = 474
Score = 178 (67.7 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR 152
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R WR
Sbjct: 112 FQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWR 167
Score = 173 (66.0 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 295 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 354
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + ++ +H R + +DPS +GFY ++
Sbjct: 355 LDPHYCQPTVDVSQPSFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGNR 402
Score = 98 (39.6 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 146 RLGRP-WRK-PLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
R G P W + L+ DR + I+ F D +PF +H L++ G++ G AG W GP
Sbjct: 193 RRGPPRWTQGALEMEQDRWHRRIVSWFADHPRAPFGLHRLVELGRSSGKKAGDWYGP 249
>DICTYBASE|DDB_G0283753 [details] [associations]
symbol:DDB_G0283753 species:44689 "Dictyostelium
discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
dictyBase:DDB_G0283753 Pfam:PF03416 GO:GO:0005737 EMBL:AAFI02000056
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
ProtClustDB:CLSZ2431228 RefSeq:XP_638996.1
ProteinModelPortal:Q54QM7 MEROPS:C54.A09 EnsemblProtists:DDB0218520
GeneID:8624242 KEGG:ddi:DDB_G0283753 InParanoid:Q54QM7 OMA:RTHVSEV
Uniprot:Q54QM7
Length = 551
Score = 209 (78.6 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 42/105 (40%), Positives = 62/105 (59%)
Query: 97 FNQDFSSRIL-ISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPL 155
F DF++R+L +YR+GF I D+ +D GWGCMLRS QML++ LL + LG W++
Sbjct: 143 FLNDFTTRVLWFTYRQGFPCIDDTMYDNDCGWGCMLRSGQMLLSNVLLHNILGDEWKRSS 202
Query: 156 QKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+ +I+ +F D ++PFSIHN+ G+ G G W P
Sbjct: 203 SAT----HPDIISMFLDKPSAPFSIHNIAMEGQNLGKNIGEWFAP 243
Score = 200 (75.5 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 248 IDDASRHCSVFSKGQAD----WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVG 303
IDD S+ + D W P+ + +N Y +L F FPQ+LG+VG
Sbjct: 363 IDDESKD-EISENNNKDNDETWEPLLILIPMRLGLDGLNSIYHSSLLEIFKFPQNLGVVG 421
Query: 304 GKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSL 363
GKP AS Y + Q+++ YLDPH VQ I + ++ + +T+ + H+ +DPSL
Sbjct: 422 GKPRASLYFIAAQDDNLFYLDPHTVQNHIEV-ENGSKFPLNTFFCSTTKRTHVSEVDPSL 480
Query: 364 AIGFYCRDK 372
+ F+C+ K
Sbjct: 481 VVAFFCKTK 489
>UNIPROTKB|F1PAF7 [details] [associations]
symbol:ATG4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0000045 GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AAEX03014562
OMA:IPGALPM Ensembl:ENSCAFT00000020734 Uniprot:F1PAF7
Length = 319
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 85/255 (33%), Positives = 120/255 (47%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 190 YGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGE-RGGAP---- 244
G + G W GP + + + LA + L + M VV D RG P
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFD-TWSALAVH-IAMDNTVVMEDIRRLCRGSLPCAGA 118
Query: 245 VVCIDDASRHCSVFSKGQ------ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQS 298
D+SRHC+ F G A W P+ +N Y+ TL+ F PQS
Sbjct: 119 AALPADSSRHCNGFPAGAEVTNRLAPWRPLVLLIPLRLGLTDINEAYVETLKRCFMMPQS 178
Query: 299 LGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDS 358
LG++GGKP ++ Y +G E IYLDPH QP + D S + + +
Sbjct: 179 LGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEFTDSCFIPDESFHCQHPPSRMSIGE 238
Query: 359 IDPSLAIGFYCRDKG 373
+DPS+A+GF+C+ +G
Sbjct: 239 LDPSIAVGFFCKTEG 253
>UNIPROTKB|F1S3M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
OMA:YGWAVKS EMBL:CU993813 Ensembl:ENSSSCT00000014905 Uniprot:F1S3M2
Length = 469
Score = 184 (69.8 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 290 AEWKAVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 349
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 350 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFTKMDPSCTVGFYAGDR 397
Score = 170 (64.9 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 111 FQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 165
Score = 91 (37.1 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+R + +I+ F D +PF +H L++ G++ G AG W GP
Sbjct: 204 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGP 244
>UNIPROTKB|Q684M2 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005 CTD:84971
OrthoDB:EOG45MN5B EMBL:AJ632303 RefSeq:NP_001116551.1
UniGene:Ssc.6142 ProteinModelPortal:Q684M2 GeneID:100141400
KEGG:ssc:100141400 Uniprot:Q684M2
Length = 469
Score = 184 (69.8 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 290 AEWKAVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 349
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 350 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFTKMDPSCTVGFYAGDR 397
Score = 170 (64.9 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 111 FQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 165
Score = 91 (37.1 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+R + +I+ F D +PF +H L++ G++ G AG W GP
Sbjct: 204 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGP 244
>UNIPROTKB|E2RDP2 [details] [associations]
symbol:ATG4D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 CTD:84971 OMA:YGWAVKS
EMBL:AAEX03012418 RefSeq:XP_542069.1 ProteinModelPortal:E2RDP2
Ensembl:ENSCAFT00000028187 GeneID:484953 KEGG:cfa:484953
NextBio:20859019 Uniprot:E2RDP2
Length = 473
Score = 182 (69.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 294 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 353
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 354 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGDQ 401
Score = 170 (64.9 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 111 FQRDFVSRLWLTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 165
Score = 91 (37.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+R + +I+ F D +PF +H L++ G++ G AG W GP
Sbjct: 208 ERRHRQIVSWFADHPQAPFGLHRLVELGQSSGKKAGDWYGP 248
>UNIPROTKB|Q86TL0 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0006508 "proteolysis" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0006508
GO:GO:0004197 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOGENOM:HOG000294192 HOVERGEN:HBG050537
EMBL:AJ312332 EMBL:BC068992 IPI:IPI00328573 RefSeq:NP_116274.3
UniGene:Hs.512799 ProteinModelPortal:Q86TL0 SMR:Q86TL0
STRING:Q86TL0 MEROPS:C54.005 PhosphoSite:Q86TL0 DMDM:61211809
PRIDE:Q86TL0 DNASU:84971 Ensembl:ENST00000309469 GeneID:84971
KEGG:hsa:84971 UCSC:uc002mov.3 CTD:84971 GeneCards:GC19P010654
HGNC:HGNC:20789 MIM:611340 neXtProt:NX_Q86TL0 PharmGKB:PA134907475
InParanoid:Q86TL0 OMA:YGWAVKS OrthoDB:EOG45MN5B GenomeRNAi:84971
NextBio:75518 ArrayExpress:Q86TL0 Bgee:Q86TL0 CleanEx:HS_ATG4D
Genevestigator:Q86TL0 GermOnline:ENSG00000130734 Uniprot:Q86TL0
Length = 474
Score = 183 (69.5 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 295 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQDDFLLY 354
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 355 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGDR 402
Score = 168 (64.2 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 112 FQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 166
Score = 91 (37.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+R + +I+ F D +PF +H L++ G++ G AG W GP
Sbjct: 209 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGP 249
>UNIPROTKB|F1S810 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:CU467524
Ensembl:ENSSSCT00000004223 Uniprot:F1S810
Length = 458
Score = 226 (84.6 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQS 224
+I+ FGDS + F +H L++ GK G AG W GP + L + Q
Sbjct: 199 KIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAH---ILRKAVEEARHPDLQG 255
Query: 225 LPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPR 284
+ IYV +D V D + C+ + D + E+ N
Sbjct: 256 I--TIYVA---QD-----CTVYSSDVIDKQCASMAPDNTDDKAVIILVPVRLGGERTNAD 305
Query: 285 YIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS 344
Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D +T
Sbjct: 306 YLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLET- 364
Query: 345 TYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+H + + +DPS IGFYCR+
Sbjct: 365 -FHCPSPKKMSFRKMDPSCTIGFYCRN 390
Score = 164 (62.8 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F + S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQLEGSALTTDCGWGCTLRTGQMLLAQGLVLHFLGRAWTWP 136
>UNIPROTKB|E2R5A4 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 CTD:84938
OMA:PARSGCT EMBL:AAEX03003767 EMBL:AAEX03003768 RefSeq:XP_852273.1
RefSeq:XP_865426.1 ProteinModelPortal:E2R5A4
Ensembl:ENSCAFT00000029726 GeneID:489561 KEGG:cfa:489561
NextBio:20862726 Uniprot:E2R5A4
Length = 458
Score = 224 (83.9 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 58/207 (28%), Positives = 91/207 (43%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQS 224
+I+ FGDS + F +H L++ GK G AG W GP + L + Q
Sbjct: 199 KIISWFGDSPLALFGLHQLIKYGKKSGKKAGDWYGPAVVAH---ILRKAVEEARHPDLQG 255
Query: 225 LPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPR 284
+ IYV +D V D + C+ + D + E+ N
Sbjct: 256 I--TIYVA---QD-----CTVYSSDVIDKQCTSMASDNTDDKAVIILIPVRLGGERTNTD 305
Query: 285 YIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS 344
Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D +T
Sbjct: 306 YLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLET- 364
Query: 345 TYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+H + + +DPS IGFYCR+
Sbjct: 365 -FHCPSPKKMSFRKMDPSCTIGFYCRN 390
Score = 165 (63.1 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEGSAFTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
>UNIPROTKB|F1MJ23 [details] [associations]
symbol:ATG4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0005576 GO:GO:0015031 GO:GO:0000045
GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 OMA:PARSGCT EMBL:DAAA02008674
IPI:IPI00717434 UniGene:Bt.31619 PRIDE:F1MJ23
Ensembl:ENSBTAT00000013356 Uniprot:F1MJ23
Length = 458
Score = 221 (82.9 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 57/207 (27%), Positives = 90/207 (43%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQS 224
+I+ FGDS + F +H L++ GK G AG W GP + R G
Sbjct: 199 KIISWFGDSPLALFGLHQLIECGKKSGKKAGDWYGPAVVAHILRKAVEEARHPDLKG--- 255
Query: 225 LPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPR 284
+ IYV +D V D + C+ + + + E+ N
Sbjct: 256 --ITIYVA---QD-----CTVYSSDVIDKQCTSMASDNTNDKAVIILVPVRLGGERTNAD 305
Query: 285 YIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS 344
Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D +T
Sbjct: 306 YLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLET- 364
Query: 345 TYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+H + + +DPS IGFYCR+
Sbjct: 365 -FHCPSPKKMSFRKMDPSCTIGFYCRN 390
Score = 167 (63.8 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
>UNIPROTKB|Q96DT6 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IDA] [GO:0000045 "autophagic vacuole
assembly" evidence=IGI] [GO:0006612 "protein targeting to membrane"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0006508 "proteolysis"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] EMBL:AJ312234
Pfam:PF03416 GO:GO:0005829 GO:GO:0005576 GO:GO:0006612
EMBL:CH471059 GO:GO:0000045 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AJ320169 EMBL:AK027773 EMBL:AC103923 EMBL:BC033024
IPI:IPI00156979 RefSeq:NP_116241.2 RefSeq:NP_835739.1
UniGene:Hs.7353 ProteinModelPortal:Q96DT6 SMR:Q96DT6 IntAct:Q96DT6
STRING:Q96DT6 MEROPS:C54.004 PhosphoSite:Q96DT6 DMDM:61211867
PRIDE:Q96DT6 DNASU:84938 Ensembl:ENST00000317868
Ensembl:ENST00000371120 GeneID:84938 KEGG:hsa:84938 UCSC:uc001dat.3
CTD:84938 GeneCards:GC01P063249 HGNC:HGNC:16040 HPA:HPA007049
MIM:611339 neXtProt:NX_Q96DT6 PharmGKB:PA25183 HOGENOM:HOG000294192
HOVERGEN:HBG050537 InParanoid:Q96DT6 OMA:PARSGCT OrthoDB:EOG4GB760
ChiTaRS:ATG4C GenomeRNAi:84938 NextBio:75392 ArrayExpress:Q96DT6
Bgee:Q96DT6 CleanEx:HS_ATG4C Genevestigator:Q96DT6
GermOnline:ENSG00000125703 Uniprot:Q96DT6
Length = 458
Score = 217 (81.4 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQS 224
+I+ FGDS + F +H L++ GK G AG W GP + L + Q
Sbjct: 199 KIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAH---ILRKAVEEARHPDLQG 255
Query: 225 LPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPR 284
+ IYV +D + V+ AS + AD + E+ N
Sbjct: 256 I--TIYVA---QDCTVYNSDVIDKQSAS-----MTSDNADDKAVIILVPVRLGGERTNTD 305
Query: 285 YIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTS 344
Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D +T
Sbjct: 306 YLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLET- 364
Query: 345 TYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+H + + +DPS IGFYCR+
Sbjct: 365 -FHCPSPKKMSFRKMDPSCTIGFYCRN 390
Score = 167 (63.8 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
>RGD|1598323 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
assembly" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA;ISO] [GO:0006914 "autophagy" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
RGD:1598323 Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006508 GO:GO:0004197 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 IPI:IPI00763704
Ensembl:ENSRNOT00000011631 Uniprot:F1M3M0
Length = 432
Score = 166 (63.5 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 53 FRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 110
Score = 166 (63.5 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDD 338
E+ N Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D
Sbjct: 274 ERTNIDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKD 333
Query: 339 LEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+T +H + + +DPS IGFYCR+
Sbjct: 334 FPLET--FHCPSPKKMSFRKMDPSCTIGFYCRN 364
Score = 91 (37.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+I+ FGDS + F +H L++ GK G AG W GP
Sbjct: 173 QIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGP 208
Score = 42 (19.8 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 58 PSRTGISSSTSDIWLLGVCHK 78
P I SS SD W HK
Sbjct: 110 PDALHIESSDSDSWTSNTIHK 130
Score = 38 (18.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 290 RLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVI 332
+ T +F SL G+ T V ++E S + D H VQ I
Sbjct: 130 KFTASFEASLS---GERELRTPAVSLKETSGKHPDDHAVQSEI 169
>MGI|MGI:2651854 [details] [associations]
symbol:Atg4c "autophagy related 4C, cysteine peptidase"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISO;ISS] [GO:0005576 "extracellular region"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=ISO;ISS] [GO:0008152 "metabolic
process" evidence=ISA] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=ISA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] MGI:MGI:2651854
Pfam:PF03416 GO:GO:0005737 GO:GO:0005576 GO:GO:0015031
GO:GO:0000045 GO:GO:0006914 GO:GO:0006508 GO:GO:0004197
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:AJ312233 EMBL:AL627166 EMBL:BC058981
IPI:IPI00177235 RefSeq:NP_001139439.1 RefSeq:NP_778194.3
UniGene:Mm.241663 ProteinModelPortal:Q811C2 SMR:Q811C2
STRING:Q811C2 PhosphoSite:Q811C2 PRIDE:Q811C2
Ensembl:ENSMUST00000030279 Ensembl:ENSMUST00000180278 GeneID:242557
KEGG:mmu:242557 InParanoid:B1ASJ9 NextBio:385412 Bgee:Q811C2
CleanEx:MM_ATG4C Genevestigator:Q811C2
GermOnline:ENSMUSG00000028550 Uniprot:Q811C2
Length = 458
Score = 168 (64.2 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDD 338
E+ N Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ D
Sbjct: 300 ERTNTDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKD 359
Query: 339 LEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRD 371
+T +H + + +DPS IGFYCR+
Sbjct: 360 FPLET--FHCPSPKKMSFRKMDPSCTIGFYCRN 390
Score = 166 (63.5 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEASALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
Score = 90 (36.7 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 165 EILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
+I+ FGDS + F +H L++ GK G AG W GP
Sbjct: 199 KIISWFGDSPVAVFGLHRLIEFGKKSGKKAGDWYGP 234
>UNIPROTKB|F8WD71 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 IPI:IPI00941681 HGNC:HGNC:20790 ChiTaRS:ATG4B
ProteinModelPortal:F8WD71 SMR:F8WD71 PRIDE:F8WD71
Ensembl:ENST00000396411 ArrayExpress:F8WD71 Bgee:F8WD71
Uniprot:F8WD71
Length = 319
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 81/253 (32%), Positives = 117/253 (46%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 190 YGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCID 249
G + G W GP + + + LA + L + M VV +E V C
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLAVFD-TWSSLAVH-IAMDNTVVM-EEIRRLCRTSVPCAG 117
Query: 250 ------DASRHCSVFSKGQ------ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQ 297
D+ RHC+ F G + W P+ +N Y+ TL+ F PQ
Sbjct: 118 ATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQ 177
Query: 298 SLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLD 357
SLG++GGKP ++ Y +G E IYLDPH QP + D S + + +
Sbjct: 178 SLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIA 237
Query: 358 SIDPSLAIGFYCR 370
+DPS+A+GF+C+
Sbjct: 238 ELDPSIAVGFFCK 250
>DICTYBASE|DDB_G0273553 [details] [associations]
symbol:atg4-2 "peptidase C54 family protein"
species:44689 "Dictyostelium discoideum" [GO:0006914 "autophagy"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
dictyBase:DDB_G0273553 dictyBase:DDB_G0273443 Pfam:PF03416
GO:GO:0005634 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0006508 GenomeReviews:CM000151_GR EMBL:AAFI02000010
GO:GO:0004197 HSSP:Q9Y4P1 eggNOG:NOG239662 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY191018 RefSeq:XP_644593.1
RefSeq:XP_644658.1 ProteinModelPortal:Q557H7 MEROPS:C54.A08
EnsemblProtists:DDB0185148 EnsemblProtists:DDB0304861
GeneID:8618957 GeneID:8619020 KEGG:ddi:DDB_G0273443
KEGG:ddi:DDB_G0273553 OMA:EEWLAPT ProtClustDB:CLSZ2431228
Uniprot:Q557H7
Length = 745
Score = 216 (81.1 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 265 WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLD 324
W + +K+N YI L+L PQSLG +GGKP S Y +G Q++ IYLD
Sbjct: 503 WKSLIIMIPLKLGADKLNSTYIEKLKLLLKLPQSLGFIGGKPKQSFYFIGFQDDQVIYLD 562
Query: 325 PHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
PH VQ +N D ++TY + + + +DPSL+IGFYCRD+
Sbjct: 563 PHFVQESVNPNSFDY---SNTYSGCIPQKMPFTQLDPSLSIGFYCRDQ 607
Score = 162 (62.1 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP-- 154
F D +S I SYRK F PI ++ IT+D+GWGCMLR+ QM++A+AL+ H P
Sbjct: 230 FLSDVASMIWFSYRKDFPPIENTNITTDIGWGCMLRTGQMILARALIKHLYKENDMVPEI 289
Query: 155 -LQKPFDREYVEILHLFGD--SETSPFSIHNLLQAGKA 189
+KP Y ++L F D S+ + IH ++ +A
Sbjct: 290 ERKKPHSN-YSQVLAWFSDYPSKEHVYGIHQIVNKKQA 326
Score = 41 (19.5 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 66 STSDIWLLGVCH 77
S S IWL+G C+
Sbjct: 150 SPSPIWLMGRCY 161
>DICTYBASE|DDB_G0273443 [details] [associations]
symbol:atg4-1 "peptidase C54 family protein"
species:44689 "Dictyostelium discoideum" [GO:0006914 "autophagy"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA;ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
dictyBase:DDB_G0273553 dictyBase:DDB_G0273443 Pfam:PF03416
GO:GO:0005634 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0006508 GenomeReviews:CM000151_GR EMBL:AAFI02000010
GO:GO:0004197 HSSP:Q9Y4P1 eggNOG:NOG239662 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AY191018 RefSeq:XP_644593.1
RefSeq:XP_644658.1 ProteinModelPortal:Q557H7 MEROPS:C54.A08
EnsemblProtists:DDB0185148 EnsemblProtists:DDB0304861
GeneID:8618957 GeneID:8619020 KEGG:ddi:DDB_G0273443
KEGG:ddi:DDB_G0273553 OMA:EEWLAPT ProtClustDB:CLSZ2431228
Uniprot:Q557H7
Length = 745
Score = 216 (81.1 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 265 WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLD 324
W + +K+N YI L+L PQSLG +GGKP S Y +G Q++ IYLD
Sbjct: 503 WKSLIIMIPLKLGADKLNSTYIEKLKLLLKLPQSLGFIGGKPKQSFYFIGFQDDQVIYLD 562
Query: 325 PHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
PH VQ +N D ++TY + + + +DPSL+IGFYCRD+
Sbjct: 563 PHFVQESVNPNSFDY---SNTYSGCIPQKMPFTQLDPSLSIGFYCRDQ 607
Score = 162 (62.1 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP-- 154
F D +S I SYRK F PI ++ IT+D+GWGCMLR+ QM++A+AL+ H P
Sbjct: 230 FLSDVASMIWFSYRKDFPPIENTNITTDIGWGCMLRTGQMILARALIKHLYKENDMVPEI 289
Query: 155 -LQKPFDREYVEILHLFGD--SETSPFSIHNLLQAGKA 189
+KP Y ++L F D S+ + IH ++ +A
Sbjct: 290 ERKKPHSN-YSQVLAWFSDYPSKEHVYGIHQIVNKKQA 326
Score = 41 (19.5 bits), Expect = 6.5e-28, Sum P(3) = 6.5e-28
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 66 STSDIWLLGVCH 77
S S IWL+G C+
Sbjct: 150 SPSPIWLMGRCY 161
>ZFIN|ZDB-GENE-040625-84 [details] [associations]
symbol:atg4c "autophagy-related 4C (yeast)"
species:7955 "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 ZFIN:ZDB-GENE-040625-84 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.004 CTD:84938
HOGENOM:HOG000294192 HOVERGEN:HBG050537 OMA:PARSGCT
OrthoDB:EOG4GB760 EMBL:BX936431 EMBL:BC071514 IPI:IPI00512295
RefSeq:NP_001002103.1 UniGene:Dr.77023 Ensembl:ENSDART00000051779
Ensembl:ENSDART00000127879 GeneID:415193 KEGG:dre:415193
InParanoid:Q6IQ96 NextBio:20818863 Uniprot:Q6IQ96
Length = 463
Score = 198 (74.8 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 56/212 (26%), Positives = 91/212 (42%)
Query: 166 ILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSL 225
I+ FGD ++ I+ L++ G G AG W GP + + R + + +
Sbjct: 197 IVSWFGDGPSAQLGIYKLVELGMTSGKQAGDWYGPAVVAH----ILR-KAVDEAVDAMLK 251
Query: 226 PMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQA-------DWTPIXXXXXXXXXX 278
+ +YV +D A V ID S S Q D +
Sbjct: 252 GIRVYVA---QDCTVYSADV--IDSHSTRTESHSDPQGLDSGASPDSRAVVILIPVRLGG 306
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDD 338
EK+NP Y+ ++ + +GI+GGKP + Y VG Q++S IY+DPH Q +++ D
Sbjct: 307 EKINPEYLNFVKSILSLEYCIGIIGGKPKQAYYFVGFQDDSLIYMDPHYCQSFVDVSTSD 366
Query: 339 LEADTSTYHSDVIRHIHLDSIDPSLAIGFYCR 370
+ +H + + +DPS IGFY +
Sbjct: 367 FPLQS--FHCPSPKKMSFSKMDPSCTIGFYSK 396
Score = 174 (66.3 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR--KP 154
F +DF+SR+ ++YR+ F + S TSD GWGC LR+ QM++AQALL H LGR W+ +
Sbjct: 78 FRKDFTSRVWLTYREEFPALPGSSFTSDCGWGCTLRAGQMILAQALLLHILGRDWKWSEA 137
Query: 155 LQ-KPFDRE 162
L +P D E
Sbjct: 138 LSLEPLDTE 146
>UNIPROTKB|F1RXI5 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 OMA:DIKKMCC
GeneTree:ENSGT00530000063000 EMBL:CU463012
Ensembl:ENSSSCT00000013744 Uniprot:F1RXI5
Length = 359
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 79/284 (27%), Positives = 134/284 (47%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + C L Q++ Q ++ LG W QK
Sbjct: 48 DISARLWFTYRRKFSPIGRTGSVPTTKDMCELPCGQLIPVQQIVCIHLGTDWNWEKQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
+EY IL F D + +SIH + Q G G + G W GP + + + LA +
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSL 167
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCIDDA--SR----HCSVFSKGQAD----WTPIX 269
S+ + + ++ + A + D A SR + S SKG + W P+
Sbjct: 168 AVYVSMDNTVVI---EDIKKMCCASALSADAAVESRRDSLNASTQSKGPSACRPAWKPLL 224
Query: 270 XXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQ 329
++NP Y+ + F PQSLG +GGKP + Y +G + I+LDPH Q
Sbjct: 225 LIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQ 284
Query: 330 PVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
++ ++ + D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 285 TFVDTEENGM-VDDQTFHCLQPPQRMNILNLDPSVALGFFCQEE 327
>ASPGD|ASPL0000035892 [details] [associations]
symbol:AN3470 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501
"C-terminal protein lipidation" evidence=IEA] [GO:0006612 "protein
targeting to membrane" evidence=IEA] [GO:0000422 "mitochondrion
degradation" evidence=IEA] [GO:0034727 "piecemeal microautophagy of
nucleus" evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0051697 "protein delipidation"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:BN001306 eggNOG:NOG239662
KO:K08342 OMA:PYRESST InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AACD01000058 RefSeq:XP_661074.1 STRING:Q5B7L0 MEROPS:C54.006
GeneID:2874196 KEGG:ani:AN3470.2 HOGENOM:HOG000034155
OrthoDB:EOG470XRS Uniprot:Q5B7L0
Length = 402
Score = 185 (70.2 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDD 338
+++ Y L+ PQS+GI GG+P AS Y V VQ YLDPH+ +P + +
Sbjct: 257 DRITAVYWNGLKAVLQLPQSVGIAGGRPSASHYFVAVQGSHFFYLDPHNTRPALRYSESG 316
Query: 339 L--EADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
E + +TYH+ +R +++ +DPS+ IGF RD+
Sbjct: 317 TYTEDEVNTYHTRRLRRLNIQDMDPSMLIGFLIRDE 352
Score = 181 (68.8 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 43/114 (37%), Positives = 60/114 (52%)
Query: 99 QDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKP 158
Q+ S + + R I TSD GWGCM+RS Q L+A ++ LGR WR+ +
Sbjct: 98 QEGSLSLTLGVRLRSQLIDAQGFTSDTGWGCMIRSGQSLLANSMAILLLGRDWRRGERL- 156
Query: 159 FDREYVEILHLFGDSETSPFSIHNLLQAGKAY-GLAAGSWVGPYAMCRSWEALA 211
E ++L LF DS +PFSIH+ ++ G + G G W GP A R + LA
Sbjct: 157 --EEEGKLLSLFADSPHAPFSIHSFVKHGADFCGKHPGEWFGPTATARCIQGLA 208
Score = 53 (23.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 97 FNQDFSSRILISYRKGFDPI---GDSKITSDVGWGCMLRSSQMLVAQ 140
F DF S+I ++YR F PI + + + G LRS Q++ AQ
Sbjct: 73 FLLDFESKIWMTYRSNFPPIPKDAGQEGSLSLTLGVRLRS-QLIDAQ 118
>UNIPROTKB|Q523C3 [details] [associations]
symbol:ATG4 "Cysteine protease ATG4" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 EMBL:CM001234 eggNOG:NOG239662
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624 OrthoDB:EOG470XRS
RefSeq:XP_003716330.1 STRING:Q523C3 EnsemblFungi:MGG_03580T0
GeneID:2676731 KEGG:mgr:MGG_03580 Uniprot:Q523C3
Length = 491
Score = 194 (73.4 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 48/111 (43%), Positives = 62/111 (55%)
Query: 102 SSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDR 161
SSR+ + R + T+D GWGCM+R+ Q L+A +LL RLGR WR+ Q P D
Sbjct: 179 SSRMSFAMRLKTMADQQAGFTTDSGWGCMIRTGQSLLANSLLTCRLGRSWRRG-QAP-DE 236
Query: 162 EYVEILHLFGDSETSPFSIHNLLQAGKAY-GLAAGSWVGPYAMCRSWEALA 211
E ++L LF D +P+SIHN + G A G G W GP A R ALA
Sbjct: 237 ER-KLLSLFADDPRAPYSIHNFVAHGAAKCGKYPGEWFGPSATARCIHALA 286
Score = 169 (64.5 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQ---EESA---IYLDPHDVQPVI 332
+K+N Y +L T PQS+GI GG+P +S Y VG Q E+ YLDPH +P +
Sbjct: 334 DKINQVYWESLTATLQLPQSVGIAGGRPSSSHYFVGAQRSDEDQGSYLFYLDPHHTRPAL 393
Query: 333 NIGKDD---LEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
+D +D + H+ +R +H+ +DPS+ IGF D+
Sbjct: 394 PFHEDPQLYTPSDVDSCHTRRLRRLHIREMDPSMLIGFLILDE 436
Score = 65 (27.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 97 FNQDFSSRILISYRKGFDPI 116
F DF SRI ++YR GF+PI
Sbjct: 151 FLNDFESRIWMTYRSGFEPI 170
>UNIPROTKB|C9JIK8 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00894238 ProteinModelPortal:C9JIK8 SMR:C9JIK8 STRING:C9JIK8
Ensembl:ENST00000400771 ArrayExpress:C9JIK8 Bgee:C9JIK8
Uniprot:C9JIK8
Length = 219
Score = 193 (73.0 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 39/84 (46%), Positives = 51/84 (60%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNL 183
Y +L+ F D + S +SIH +
Sbjct: 105 PDSYFSVLNAFIDRKDSYYSIHQI 128
Score = 123 (48.4 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 250 DASRHCSVFSKGQ------ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVG 303
D+ RHC+ F G + W P+ +N Y+ TL+ F PQSLG++G
Sbjct: 147 DSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIG 206
Query: 304 GKPGASTYIVG 314
GKP ++ Y +G
Sbjct: 207 GKPNSAHYFIG 217
>UNIPROTKB|A6QQI5 [details] [associations]
symbol:ATG4D "ATG4D protein" species:9913 "Bos taurus"
[GO:0015031 "protein transport" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0008234 GO:GO:0006508
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
HOGENOM:HOG000294192 HOVERGEN:HBG050537 MEROPS:C54.005
EMBL:DAAA02019466 EMBL:BC149849 IPI:IPI00867381 UniGene:Bt.30691
Ensembl:ENSBTAT00000053355 Uniprot:A6QQI5
Length = 359
Score = 183 (69.5 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 180 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLY 239
Query: 323 LDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
LDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 240 LDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGDR 287
Score = 165 (63.1 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR 152
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R ++
Sbjct: 111 FQRDFVSRLWLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRVYK 166
>UNIPROTKB|K7GK67 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033291 Uniprot:K7GK67
Length = 325
Score = 244 (91.0 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 64/233 (27%), Positives = 112/233 (48%)
Query: 151 WRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEAL 210
W K ++P +EY IL F D + +SIH + Q G G + G W GP + + + L
Sbjct: 28 WEKQKEQP--KEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL 85
Query: 211 ARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDA--SR----HCSVFSKGQAD 264
A + S+ + + ++ + A + D A SR + S SKG +
Sbjct: 86 ALFDEWNSLAVYVSMDNTVVI---EDIKKMCCASALSADAAVESRRDSLNASTQSKGPSA 142
Query: 265 ----WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESA 320
W P+ ++NP Y+ + F PQSLG +GGKP + Y +G +
Sbjct: 143 CRPAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDEL 202
Query: 321 IYLDPHDVQPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
I+LDPH Q ++ ++ + D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 203 IFLDPHTTQTFVDTEENGM-VDDQTFHCLQPPQRMNILNLDPSVALGFFCQEE 254
Score = 46 (21.3 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 DFSSRILISYRKGFDPI 116
D S+R+ +YR+ F PI
Sbjct: 8 DISARLWFTYRRKFSPI 24
>UNIPROTKB|F1LX10 [details] [associations]
symbol:F1LX10 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
Pfam:PF03416 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
GO:GO:0008234 GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
IPI:IPI00566476 Ensembl:ENSRNOT00000049323 Uniprot:F1LX10
Length = 309
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 80/273 (29%), Positives = 127/273 (46%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR ++Y + F IG + S GWGCML+ QM+ QA + LG+ WR K
Sbjct: 30 DIASRRCLTYMRNFSAIGGTGPASVTGWGCMLQCGQMIFVQAPVCWHLGQDWRWTQWK-- 87
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETG 219
+ +L+ F D + +SIH + Q G G + G W G + + L + +T
Sbjct: 88 --RLLNVLNAFLDRKDRYYSIHQIAQMGVNEGKSIGKWYGTNTV---GQVLKKLAVFDTW 142
Query: 220 LGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQ------ADWTPIXXXXX 273
S +AI+V E G A + D RHC+ G + W P+
Sbjct: 143 ----SF-LAIHVTL-----ESGAAALPT--DLERHCNGLPAGTEVTIRPSAWRPLVLLIP 190
Query: 274 XXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVIN 333
+ Y+ TL+ F PQSLG++GGKP ++ YI+G E + LDPH +Q ++
Sbjct: 191 LHRLTN-IKEVYVETLKHCFMMPQSLGVIGGKPNSACYIIGYVGEELVCLDPHSLQSALS 249
Query: 334 IGKDDLEADTSTYHSDVIRH-IHLDSIDPSLAI 365
+ + A T+ + H + + +DPS+A+
Sbjct: 250 L----MRASTAI----TLPHWMGIGKLDPSIAV 274
>WB|WBGene00013595 [details] [associations]
symbol:atg-4.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF03416
eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 GeneTree:ENSGT00530000063000 EMBL:AL110500
RefSeq:NP_493375.2 ProteinModelPortal:Q9NA30 SMR:Q9NA30
DIP:DIP-26265N IntAct:Q9NA30 MINT:MINT-1053134 STRING:Q9NA30
MEROPS:C54.008 PaxDb:Q9NA30 EnsemblMetazoa:Y87G2A.3 GeneID:190777
KEGG:cel:CELE_Y87G2A.3 UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3
InParanoid:Q9NA30 OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 193 (73.0 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 102 SSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDR 161
+SR +YR+ F PIG + ++D GWGCMLR +QML+ + LL +GR + ++K +
Sbjct: 58 TSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEWDIEKTSEI 117
Query: 162 EYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
Y +IL +F D + + +SIH + Q G G W GP
Sbjct: 118 -YEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGP 155
Score = 141 (54.7 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 264 DWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYL 323
+W P+ +NP Y+ ++ F PQ +GI+GG+P + Y VG+ YL
Sbjct: 226 EWRPLLLMIPLRLGLTTINPCYLSAIQEFFKIPQCVGIIGGRPNHALYFVGMSGSKLFYL 285
Query: 324 DPHDVQPVI-NIGKDDLEADTSTYHSDVIRHIHLDSIDP 361
DPH +P + K E D ST +D + HL+ + P
Sbjct: 286 DPHYCRPKTESTAKMYAEKD-STATTDDVGFSHLEELVP 323
Score = 75 (31.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 342 DTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
D STYH ++ I +++DPSLA+ +C +
Sbjct: 336 DDSTYHCQMMLWIEYENVDPSLALAMFCETR 366
>UNIPROTKB|Q9NA30 [details] [associations]
symbol:atg-4.1 "Protein ATG-4.1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03416 eggNOG:NOG239662 HOGENOM:HOG000007008
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AL110500 RefSeq:NP_493375.2
ProteinModelPortal:Q9NA30 SMR:Q9NA30 DIP:DIP-26265N IntAct:Q9NA30
MINT:MINT-1053134 STRING:Q9NA30 MEROPS:C54.008 PaxDb:Q9NA30
EnsemblMetazoa:Y87G2A.3 GeneID:190777 KEGG:cel:CELE_Y87G2A.3
UCSC:Y87G2A.3 CTD:190777 WormBase:Y87G2A.3 InParanoid:Q9NA30
OMA:ISIDNFP NextBio:946932 Uniprot:Q9NA30
Length = 454
Score = 193 (73.0 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 102 SSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDR 161
+SR +YR+ F PIG + ++D GWGCMLR +QML+ + LL +GR + ++K +
Sbjct: 58 TSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEWDIEKTSEI 117
Query: 162 EYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP 200
Y +IL +F D + + +SIH + Q G G W GP
Sbjct: 118 -YEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGP 155
Score = 141 (54.7 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 264 DWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYL 323
+W P+ +NP Y+ ++ F PQ +GI+GG+P + Y VG+ YL
Sbjct: 226 EWRPLLLMIPLRLGLTTINPCYLSAIQEFFKIPQCVGIIGGRPNHALYFVGMSGSKLFYL 285
Query: 324 DPHDVQPVI-NIGKDDLEADTSTYHSDVIRHIHLDSIDP 361
DPH +P + K E D ST +D + HL+ + P
Sbjct: 286 DPHYCRPKTESTAKMYAEKD-STATTDDVGFSHLEELVP 323
Score = 75 (31.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 342 DTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
D STYH ++ I +++DPSLA+ +C +
Sbjct: 336 DDSTYHCQMMLWIEYENVDPSLALAMFCETR 366
>POMBASE|SPAC19B12.08 [details] [associations]
symbol:atg4 "Atg8 deconjugator Atg4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000045 "autophagic
vacuole assembly" evidence=ISO] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IMP]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IC] [GO:0016485
"protein processing" evidence=ISO] [GO:0032258 "CVT pathway"
evidence=ISO] PomBase:SPAC19B12.08 Pfam:PF03416 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000045
GO:GO:0006508 GO:GO:0016485 GO:GO:0006995 GO:GO:0032258
GO:GO:0004197 eggNOG:NOG239662 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 HOGENOM:HOG000034155 OrthoDB:EOG470XRS
RefSeq:NP_594771.1 ProteinModelPortal:Q9P373 STRING:Q9P373
MEROPS:C54.A07 EnsemblFungi:SPAC19B12.08.1 GeneID:2542182
KEGG:spo:SPAC19B12.08 OMA:MELMARF NextBio:20803253 Uniprot:Q9P373
Length = 320
Score = 179 (68.1 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 55/158 (34%), Positives = 72/158 (45%)
Query: 48 MRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILI 107
M R ER L + T + IW LG +KI F D S I I
Sbjct: 4 MARFLERYLHFAPTNTEPPGTLIWFLGHSYKIEDSQWPEK---------FLYDSFSLITI 54
Query: 108 SYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEIL 167
+YR G + G +TSD GWGCM+RS+Q L+A L R+ P +++ EIL
Sbjct: 55 TYRSGIE--GLENMTSDTGWGCMIRSTQTLLANCL---RICYP---------EKQLKEIL 100
Query: 168 HLFGDSETSPFSIHNLLQAGKAY-GLAAGSWVGPYAMC 204
LF D ++PFSIH + GK + G W GP C
Sbjct: 101 ALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTSC 138
Score = 126 (49.4 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDD 338
+ +N Y L F +GI GG+P ++ Y Q + YLDPH +
Sbjct: 187 DSINESYYDQLLQVFEIRSFVGITGGRPRSAHYFYARQNQYFFYLDPHCTHFAHTTTQP- 245
Query: 339 LEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDKGLLVTFE 379
A T+HS +R + + +DP + GF RD+ +FE
Sbjct: 246 --ASEETFHSATLRRVAIQDLDPCMIFGFLIRDEEEWHSFE 284
>UNIPROTKB|K7GPU1 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000033275 Uniprot:K7GPU1
Length = 278
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 64/233 (27%), Positives = 112/233 (48%)
Query: 151 WRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEAL 210
W K ++P +EY IL F D + +SIH + Q G G + G W GP + + + L
Sbjct: 4 WEKQKEQP--KEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKL 61
Query: 211 ARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDA--SR----HCSVFSKGQAD 264
A + S+ + + ++ + A + D A SR + S SKG +
Sbjct: 62 ALFDEWNSLAVYVSMDNTVVI---EDIKKMCCASALSADAAVESRRDSLNASTQSKGPSA 118
Query: 265 ----WTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESA 320
W P+ ++NP Y+ + F PQSLG +GGKP + Y +G +
Sbjct: 119 CRPAWKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDEL 178
Query: 321 IYLDPHDVQPVINIGKDDLEADTSTYHS-DVIRHIHLDSIDPSLAIGFYCRDK 372
I+LDPH Q ++ ++ + D T+H + +++ ++DPS+A+GF+C+++
Sbjct: 179 IFLDPHTTQTFVDTEENGM-VDDQTFHCLQPPQRMNILNLDPSVALGFFCQEE 230
>UNIPROTKB|C9JQ72 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00894144 ProteinModelPortal:C9JQ72 SMR:C9JQ72 STRING:C9JQ72
Ensembl:ENST00000425239 ArrayExpress:C9JQ72 Bgee:C9JQ72
Uniprot:C9JQ72
Length = 266
Score = 235 (87.8 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 48/112 (42%), Positives = 64/112 (57%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K
Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ 104
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 211
Y +L+ F D + S +SIH + Q G G + G W GP + + + LA
Sbjct: 105 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLA 156
>UNIPROTKB|K7GM02 [details] [associations]
symbol:LOC100156732 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015031 "protein transport" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 GeneTree:ENSGT00530000063000
EMBL:CU463012 Ensembl:ENSSSCT00000035338 Uniprot:K7GM02
Length = 159
Score = 155 (59.6 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 293 FTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHS-DVI 351
F PQSLG +GGKP + Y +G + I+LDPH Q ++ ++ + D T+H
Sbjct: 68 FKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGM-VDDQTFHCLQPP 126
Query: 352 RHIHLDSIDPSLAIGFYCRDK 372
+ +++ ++DPS+A+GF+C+++
Sbjct: 127 QRMNILNLDPSVALGFFCQEE 147
Score = 98 (39.6 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 151 WRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMC 204
W K ++P +EY IL F D + +SIH + Q G G + G W GP C
Sbjct: 16 WEKQKEQP--KEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTEC 67
>FB|FBgn0038325 [details] [associations]
symbol:CG6194 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0006914 "autophagy"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0048102 "autophagic cell death"
evidence=IEP] Pfam:PF03416 EMBL:AE014297 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GO:GO:0006508 GO:GO:0035071
GO:GO:0004197 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.A03 FlyBase:FBgn0038325
EMBL:BT100116 RefSeq:NP_650452.1 UniGene:Dm.2122 SMR:Q9VF80
MINT:MINT-935388 EnsemblMetazoa:FBtr0083115 GeneID:41868
KEGG:dme:Dmel_CG6194 UCSC:CG6194-RA InParanoid:Q9VF80 OMA:ICHFLGR
GenomeRNAi:41868 NextBio:826008 Uniprot:Q9VF80
Length = 668
Score = 244 (91.0 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 52/111 (46%), Positives = 66/111 (59%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQ 156
F +DF SRI ++YR+ F + S TSD GWGCMLRS QML AQ L+ H LGR WR +
Sbjct: 266 FRRDFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSGQMLFAQGLICHFLGRSWRYDSE 325
Query: 157 KPFDREYVEILHL-----FGDS--ETSPFSIHNLLQAGKAYGLAAGSWVGP 200
Y + +H FGDS ++SPFSIH L++ G+ G G W GP
Sbjct: 326 SQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWYGP 376
Score = 243 (90.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 69/225 (30%), Positives = 107/225 (47%)
Query: 160 DREYVEILHLFGDS--ETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWE-ALARCQRA 216
D + +I+ FGDS ++SPFSIH L++ G+ G G W GP ++ + AL +
Sbjct: 334 DNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWYGPASVSYLLKHALEHAAQE 393
Query: 217 ETGLGCQSLPMA----IYVVSGDED---GERGGAPVVCIDDASRHCSVFSKG--QADWTP 267
S+ +A IY+ ++ E P V A R + +K Q W
Sbjct: 394 NADFDNISVYVAKDCTIYLQDIEDQCSIPEPAPKPHVPWQQAKRPQAETTKTEQQQHWKS 453
Query: 268 IXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHD 327
+ +K+NP Y L+L + LGI+GGKP S Y VG QE+ I+LDPH
Sbjct: 454 LIVLIPLRLGSDKLNPVYAHCLKLLLSTEHCLGILGGKPKHSLYFVGFQEDRLIHLDPHY 513
Query: 328 VQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
Q ++++ +++ + +H R + +DPS IGFYC K
Sbjct: 514 CQEMVDVNQENFSLHS--FHCKSPRKLKASKMDPSCCIGFYCATK 556
Score = 40 (19.1 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 57 GPSRTGISSSTSDIWLLGVCH 77
G R S +WLLG C+
Sbjct: 163 GKMRQTSFSKEQPVWLLGRCY 183
>UNIPROTKB|G5E979 [details] [associations]
symbol:ATG4A "ATG4 autophagy related 4 homolog A (S.
cerevisiae), isoform CRA_e" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 EMBL:CH471120
InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177 UniGene:Hs.8763
HGNC:HGNC:16489 ProteinModelPortal:G5E979 SMR:G5E979 PRIDE:G5E979
Ensembl:ENST00000343524 ArrayExpress:G5E979 Bgee:G5E979
Uniprot:G5E979
Length = 231
Score = 201 (75.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK
Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAA 194
+EY IL F D + +SIH + + + L+A
Sbjct: 108 PKEYQRILQCFLDRKDCCYSIHQMEKMCRVLPLSA 142
Score = 44 (20.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/71 (21%), Positives = 28/71 (39%)
Query: 222 CQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKV 281
C+ LP+ S D G+R + + S+ S + W P+ ++
Sbjct: 135 CRVLPL-----SADTAGDRPPDSLTA-SNQSKGTSAYCSA---WKPLLLIVPLRLGINQI 185
Query: 282 NPRYIPTLRLT 292
NP Y+ ++T
Sbjct: 186 NPVYVDAFKVT 196
>UNIPROTKB|K7EJA5 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000586863 Uniprot:K7EJA5
Length = 177
Score = 160 (61.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWR 152
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R ++
Sbjct: 40 FQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRVYK 95
Score = 88 (36.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQ 316
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q
Sbjct: 109 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQ 162
>SGD|S000005167 [details] [associations]
symbol:ATG4 "Conserved cysteine protease required for
autophagy" species:4932 "Saccharomyces cerevisiae" [GO:0006914
"autophagy" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP;IDA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051697 "protein
delipidation" evidence=IDA] [GO:0006501 "C-terminal protein
lipidation" evidence=IMP] [GO:0000045 "autophagic vacuole assembly"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000422
"mitochondrion degradation" evidence=IMP] [GO:0016485 "protein
processing" evidence=IMP] SGD:S000005167 Pfam:PF03416 GO:GO:0005829
GO:GO:0005634 GO:GO:0006612 GO:GO:0000045 GO:GO:0006508
EMBL:BK006947 GO:GO:0000422 GO:GO:0016485 GO:GO:0032258
GO:GO:0004197 GO:GO:0034727 GO:GO:0006501 EMBL:Z69381
eggNOG:NOG239662 KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 MEROPS:C54.001 OrthoDB:EOG470XRS
EMBL:Z71499 EMBL:U20390 PIR:S63181 RefSeq:NP_014176.2
ProteinModelPortal:P53867 SMR:P53867 DIP:DIP-2339N IntAct:P53867
MINT:MINT-683938 STRING:P53867 EnsemblFungi:YNL223W GeneID:855498
KEGG:sce:YNL223W CYGD:YNL223w HOGENOM:HOG000034154 OMA:IGWGCMI
NextBio:979490 Genevestigator:P53867 GermOnline:YNL223W
GO:GO:0051697 Uniprot:P53867
Length = 494
Score = 164 (62.8 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 123 SDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHN 182
+D+GWGCM+R+ Q L+ AL LGR +R + +RE + ++ F D+ +PFS+HN
Sbjct: 141 TDIGWGCMIRTGQSLLGNALQILHLGRDFRVNGNESLERES-KFVNWFNDTPEAPFSLHN 199
Query: 183 LLQAGKAYG-LAAGSWVGPYAMCRSWEAL 210
+ AG G W GP A RS ++L
Sbjct: 200 FVSAGTELSDKRPGEWFGPAATARSIQSL 228
Score = 115 (45.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 281 VNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLE 340
VN Y ++ + QS+GI GG+P +S Y G Q ++ DPH QP + +
Sbjct: 279 VNESYRESICGILSSTQSVGIAGGRPSSSLYFFGYQGNEFLHFDPHIPQPAVE------D 332
Query: 341 ADTSTYHSDVIRHIHLDSIDPSLAIG 366
+ + H+ + L +DPS+ IG
Sbjct: 333 SFVESCHTSKFGKLQLSEMDPSMLIG 358
Score = 39 (18.8 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 97 FNQDFSSRILISYRKGFDPI 116
F D SR+ +YR F PI
Sbjct: 86 FLLDVQSRVNFTYRTRFVPI 105
>UNIPROTKB|H7C2A6 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC133528
HGNC:HGNC:20790 ChiTaRS:ATG4B ProteinModelPortal:H7C2A6
Ensembl:ENST00000428861 Bgee:H7C2A6 Uniprot:H7C2A6
Length = 193
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 250 DASRHCSVFSKGQ------ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVG 303
D+ RHC+ F G + W P+ +N Y+ TL+ F PQSLG++G
Sbjct: 35 DSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIG 94
Query: 304 GKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSL 363
GKP ++ Y +G E IYLDPH QP + D S + + + +DPS+
Sbjct: 95 GKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSI 154
Query: 364 AIGFYCR 370
A+GF+C+
Sbjct: 155 AVGFFCK 161
>UNIPROTKB|K7EP43 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000586477 Uniprot:K7EP43
Length = 209
Score = 168 (64.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 78 FQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 132
Score = 62 (26.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAA 194
+R + +I+ F D +PF +H L++ G++ G A
Sbjct: 175 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKA 209
>RGD|1309664 [details] [associations]
symbol:Atg4b "autophagy related 4B, cysteine peptidase"
species:10116 "Rattus norvegicus" [GO:0000045 "autophagic vacuole
assembly" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004175 "endopeptidase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006508 "proteolysis" evidence=ISO]
[GO:0006914 "autophagy" evidence=ISO] [GO:0008152 "metabolic
process" evidence=ISO] [GO:0008233 "peptidase activity"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=ISO] [GO:0010508 "positive regulation of autophagy"
evidence=ISO] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IMP] RGD:1309664 Pfam:PF03416 GO:GO:0005737
GO:GO:0015031 GO:GO:0000045 GO:GO:0008234 GO:GO:0006508
GO:GO:0045732 eggNOG:NOG239662 HOGENOM:HOG000007008 KO:K08342
InterPro:IPR005078 PANTHER:PTHR22624 HOVERGEN:HBG050536
MEROPS:C54.003 CTD:23192 OrthoDB:EOG4JWVDK IPI:IPI00363207
EMBL:BC098833 RefSeq:NP_001020882.1 UniGene:Rn.163086
ProteinModelPortal:Q4KM36 SMR:Q4KM36 STRING:Q4KM36
PhosphoSite:Q4KM36 PRIDE:Q4KM36 GeneID:316640 KEGG:rno:316640
UCSC:RGD:1309664 InParanoid:Q4KM36 NextBio:671122
ArrayExpress:Q4KM36 Genevestigator:Q4KM36 Uniprot:Q4KM36
Length = 224
Score = 203 (76.5 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 242 GAPVVCIDDASRHCSVFSKGQA------DWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTF 295
GA + ++ + RHC+ G W P+ +N Y+ TL+ F
Sbjct: 22 GAAALSME-SERHCNGLPAGAEVTNRPLAWRPLVLLIPLRLGLTDINEAYVETLKHCFMM 80
Query: 296 PQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIH 355
PQSLG++GGKP ++ Y +G E IYLDPH QP + + D S + +
Sbjct: 81 PQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCFIPDESFHCQHPPCRMG 140
Query: 356 LDSIDPSLAIGFYCR 370
+ +DPS+A+GF+C+
Sbjct: 141 IGELDPSIAVGFFCK 155
>UNIPROTKB|F1P1T4 [details] [associations]
symbol:F1P1T4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624
GeneTree:ENSGT00530000063000 EMBL:AADN02013576 EMBL:AADN02013577
EMBL:AADN02013578 IPI:IPI01017240 Ensembl:ENSGALT00000013477
Uniprot:F1P1T4
Length = 194
Score = 200 (75.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 39/84 (46%), Positives = 52/84 (61%)
Query: 100 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPF 159
D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W+ K
Sbjct: 48 DVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQ 107
Query: 160 DREYVEILHLFGDSETSPFSIHNL 183
EY ILH F D + +SIH +
Sbjct: 108 PEEYHRILHCFLDRKDCCYSIHQM 131
>UNIPROTKB|F5H3G3 [details] [associations]
symbol:ATG4A "Cysteine protease ATG4A" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AL031177
HGNC:HGNC:16489 IPI:IPI01014972 ProteinModelPortal:F5H3G3
SMR:F5H3G3 Ensembl:ENST00000545696 UCSC:uc011msl.2
ArrayExpress:F5H3G3 Bgee:F5H3G3 Uniprot:F5H3G3
Length = 259
Score = 151 (58.2 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM++AQAL+ LGR W QK +EY IL F D + +SIH + Q G
Sbjct: 1 MLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVG 60
Query: 190 YGLAAGSWVGPYAMCRSWEALA 211
G + G W GP + + + LA
Sbjct: 61 EGKSIGEWFGPNTVAQVLKKLA 82
Score = 98 (39.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 296 PQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHS-DVIRHI 354
P S G +P S Q + I+LDPH Q ++ ++ D T+H + +
Sbjct: 113 PLSADTAGDRPPDSL-TASNQSDELIFLDPHTTQTFVDTEENGTVND-QTFHCLQSPQRM 170
Query: 355 HLDSIDPSLAIGFYCRDK 372
++ ++DPS+A+GF+C+++
Sbjct: 171 NILNLDPSVALGFFCKEE 188
>UNIPROTKB|K7ESM7 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000587256 Uniprot:K7ESM7
Length = 203
Score = 143 (55.4 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 263 ADWTPIXXXXXXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIY 322
A+W + E +NP Y+P ++ LGI+GGKP S Y +G Q++ +Y
Sbjct: 124 AEWKSVVILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQDDFLLY 183
Query: 323 LDPHDVQPVINIGKDD 338
LDPH QP +++ + D
Sbjct: 184 LDPHYCQPTVDVSQAD 199
Score = 79 (32.9 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSW 197
+R + +I+ F D +PF +H L++ G++ G AG W
Sbjct: 49 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDW 86
>UNIPROTKB|K7EPJ0 [details] [associations]
symbol:ATG4D "ATG4 autophagy related 4 homolog D (S.
cerevisiae), isoform CRA_b" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03416 EMBL:CH471106 InterPro:IPR005078
PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588667 Uniprot:K7EPJ0
Length = 228
Score = 176 (67.0 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRL--GRPWRKP 154
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L G+PWR
Sbjct: 112 FQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRGKPWRAA 171
Query: 155 LQKP 158
P
Sbjct: 172 PTSP 175
>UNIPROTKB|K7ERK1 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588857 Uniprot:K7ERK1
Length = 334
Score = 168 (64.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPW 151
F +DF SR+ ++YR+ F P+ +TSD GWGCMLRS QM++AQ LL H L R W
Sbjct: 112 FQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDW 166
Score = 61 (26.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 160 DREYVEILHLFGDSETSPFSIHNLLQAGKAYG 191
+R + +I+ F D +PF +H L++ G++ G
Sbjct: 209 ERRHRQIVSWFADHPRAPFGLHRLVELGQSSG 240
>UNIPROTKB|A6NGQ4 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
IPI:IPI00793245 ProteinModelPortal:A6NGQ4 SMR:A6NGQ4 STRING:A6NGQ4
Ensembl:ENST00000371118 ArrayExpress:A6NGQ4 Bgee:A6NGQ4
Uniprot:A6NGQ4
Length = 189
Score = 167 (63.8 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
>UNIPROTKB|C9JC51 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
IPI:IPI00644762 ProteinModelPortal:C9JC51 SMR:C9JC51 STRING:C9JC51
Ensembl:ENST00000443289 HOGENOM:HOG000213741 ArrayExpress:C9JC51
Bgee:C9JC51 Uniprot:C9JC51
Length = 151
Score = 167 (63.8 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 97 FNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKP 154
F +DF SRI ++YR+ F I S +T+D GWGC LR+ QML+AQ L+ H LGR W P
Sbjct: 79 FRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTWP 136
>CGD|CAL0001444 [details] [associations]
symbol:orf19.2401 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501 "C-terminal
protein lipidation" evidence=IEA] [GO:0006612 "protein targeting to
membrane" evidence=IEA] [GO:0034727 "piecemeal microautophagy of
nucleus" evidence=IEA] [GO:0000422 "mitochondrion degradation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0051697 "protein delipidation" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA]
CGD:CAL0001444 Pfam:PF03416 GO:GO:0005737 GO:GO:0015031
GO:GO:0006914 GO:GO:0008234 GO:GO:0006508 eggNOG:NOG239662
KO:K08342 InterPro:IPR005078 PANTHER:PTHR22624 MEROPS:C54.001
EMBL:AACQ01000131 EMBL:AACQ01000130 RefSeq:XP_713234.1
RefSeq:XP_713286.1 ProteinModelPortal:Q59UG3 STRING:Q59UG3
GeneID:3645061 GeneID:3645128 KEGG:cal:CaO19.2401
KEGG:cal:CaO19.9938 Uniprot:Q59UG3
Length = 446
Score = 177 (67.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 60/214 (28%), Positives = 91/214 (42%)
Query: 155 LQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAA--GSWVGPYAMCRSWEALAR 212
L K + + EI+ LF D +SPFSIHN ++ L G W GP A S + LA
Sbjct: 158 LLKLYPKNEPEIVKLFQDDTSSPFSIHNFIRVASLSPLHVKPGEWFGPNAASLSIKRLAS 217
Query: 213 CQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXX 272
+ + +P +S + D DD R VF+K + +
Sbjct: 218 ELLQDQEIDGIKIPRVF--ISENSD---------LFDDEIR--DVFAKEKN--ASVLILF 262
Query: 273 XXXXXXEKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVI 332
+KVN Y ++ S GI GGKP +S Y +G ++ IY DPH Q V
Sbjct: 263 PIRLGIDKVNSYYYNSIFHLLASKYSCGIAGGKPSSSFYFLGYEDTDLIYFDPHLPQVV- 321
Query: 333 NIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIG 366
+ + +YH+ +++ +DPS+ IG
Sbjct: 322 -----ETPINMDSYHTTNYNRLNISLLDPSMMIG 350
Score = 141 (54.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 122 TSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIH 181
TSD GWGCM+R+SQ L+A LL +L P +P EI+ LF D +SPFSIH
Sbjct: 138 TSDAGWGCMIRTSQNLLANTLL--KL-----YPKNEP------EIVKLFQDDTSSPFSIH 184
Query: 182 NLLQAGKAYGLAA--GSWVGPYAMCRSWEALA 211
N ++ L G W GP A S + LA
Sbjct: 185 NFIRVASLSPLHVKPGEWFGPNAASLSIKRLA 216
Score = 50 (22.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 98 NQDFSSRILISYRKGFDPIGDS 119
N S++ +SYR GF+PI S
Sbjct: 80 NDYIESKLWLSYRCGFEPIPKS 101
>UNIPROTKB|C9J3C0 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 HOGENOM:HOG000007008 InterPro:IPR005078
PANTHER:PTHR22624 EMBL:AC133528 IPI:IPI01018366 HGNC:HGNC:20790
ChiTaRS:ATG4B ProteinModelPortal:C9J3C0 SMR:C9J3C0 STRING:C9J3C0
Ensembl:ENST00000429899 ArrayExpress:C9J3C0 Bgee:C9J3C0
Uniprot:C9J3C0
Length = 147
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 190 YGLAAGSWVGPYAMCRSWEALA 211
G + G W GP + + + LA
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLA 82
>UNIPROTKB|C9JVD5 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B IPI:IPI00894423
ProteinModelPortal:C9JVD5 SMR:C9JVD5 STRING:C9JVD5
Ensembl:ENST00000430617 ArrayExpress:C9JVD5 Bgee:C9JVD5
Uniprot:C9JVD5
Length = 105
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 190 YGLAAGSWVGPYAMCRSWEALA 211
G + G W GP + + + LA
Sbjct: 61 EGKSIGQWYGPNTVAQVLKKLA 82
>UNIPROTKB|Q969K0 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 EMBL:CH471106 KO:K08342 InterPro:IPR005078
PANTHER:PTHR22624 RefSeq:NP_116274.3 UniGene:Hs.512799 DNASU:84971
GeneID:84971 KEGG:hsa:84971 CTD:84971 HGNC:HGNC:20789
PharmGKB:PA134907475 GenomeRNAi:84971 NextBio:75518 EMBL:AC011461
EMBL:BC007639 EMBL:BC016845 IPI:IPI01010164 SMR:Q969K0
STRING:Q969K0 Ensembl:ENST00000540862 UCSC:uc010dxj.3
Uniprot:Q969K0
Length = 141
Score = 139 (54.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 302 VGGKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDP 361
+GGKP S Y +G Q++ +YLDPH QP +++ + D ++ +H R + +DP
Sbjct: 1 MGGKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDP 58
Query: 362 SLAIGFYCRDK 372
S +GFY D+
Sbjct: 59 SCTVGFYAGDR 69
>UNIPROTKB|K7EMB9 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000589753 Uniprot:K7EMB9
Length = 67
Score = 122 (48.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 110 RKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGR 149
R+ F P+ +TSD GWGCMLRS QM++AQ LL H L R
Sbjct: 1 RRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPR 40
>UNIPROTKB|C9J1C1 [details] [associations]
symbol:ATG4B "Cysteine protease ATG4B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 GO:GO:0045732 InterPro:IPR005078 PANTHER:PTHR22624
OrthoDB:EOG4JWVDK EMBL:AC133528 HGNC:HGNC:20790 ChiTaRS:ATG4B
IPI:IPI00892755 ProteinModelPortal:C9J1C1 SMR:C9J1C1 STRING:C9J1C1
Ensembl:ENST00000419606 ArrayExpress:C9J1C1 Bgee:C9J1C1
Uniprot:C9J1C1
Length = 66
Score = 119 (46.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 130 MLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKA 189
MLR QM+ AQAL+ LGR WR +K Y +L+ F D + S +SIH + Q G
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 190 YGLAAG 195
G + G
Sbjct: 61 EGKSIG 66
>UNIPROTKB|H7BZW5 [details] [associations]
symbol:ATG4C "Cysteine protease ATG4C" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
GO:GO:0005737 GO:GO:0015031 GO:GO:0006914 GO:GO:0008234
GO:GO:0006508 InterPro:IPR005078 PANTHER:PTHR22624 EMBL:AC103923
HGNC:HGNC:16040 ChiTaRS:ATG4C EMBL:AC099794 EMBL:AC119425
ProteinModelPortal:H7BZW5 PRIDE:H7BZW5 Ensembl:ENST00000414558
Bgee:H7BZW5 Uniprot:H7BZW5
Length = 110
Score = 115 (45.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 279 EKVNPRYIPTLRLTFTFPQSLGIVGGKPGASTYIVGVQEESAIYLDPHDVQPVINIG-KD 337
E+ N Y+ ++ + +GI+GGKP S Y G Q++S IY+DPH Q +++ KD
Sbjct: 44 ERTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKD 103
>UNIPROTKB|K7EN30 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000588972 Uniprot:K7EN30
Length = 177
Score = 95 (38.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 317 EESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRHIHLDSIDPSLAIGFYCRDK 372
++ +YLDPH QP +++ + D ++ +H R + +DPS +GFY D+
Sbjct: 52 DDFLLYLDPHYCQPTVDVSQADFPLES--FHCTSPRKMAFAKMDPSCTVGFYAGDR 105
Score = 58 (25.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 299 LGIVGGKPGASTYIVGVQ 316
LGI+GGKP S Y +G Q
Sbjct: 11 LGIMGGKPRHSLYFIGYQ 28
>UNIPROTKB|K7EQ67 [details] [associations]
symbol:ATG4D "Cysteine protease ATG4D" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03416
InterPro:IPR005078 PANTHER:PTHR22624 HGNC:HGNC:20789 EMBL:AC011461
Ensembl:ENST00000585437 Uniprot:K7EQ67
Length = 99
Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 304 GKPGASTYIVGVQEESAIYLDPHDVQPVINIGKDDLEADTSTYHSDVIRH 353
GKP S Y +G Q++ +YLDPH QP +++ + D + + S R+
Sbjct: 1 GKPRHSLYFIGYQDDFLLYLDPHYCQPTVDVSQADFPLEVLSSSSATERY 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 379 354 0.00079 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 619 (66 KB)
Total size of DFA: 248 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.91u 0.10s 25.01t Elapsed: 00:00:01
Total cpu time: 24.92u 0.10s 25.02t Elapsed: 00:00:01
Start: Fri May 10 04:33:04 2013 End: Fri May 10 04:33:05 2013