Query 016973
Match_columns 379
No_of_seqs 339 out of 1969
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 06:51:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 99.9 1.5E-24 5.1E-29 183.5 4.4 105 179-307 5-111 (150)
2 1ejf_A Progesterone receptor P 99.9 3.5E-23 1.2E-27 170.5 6.6 103 180-305 5-109 (125)
3 1x5m_A Calcyclin-binding prote 99.9 3.9E-21 1.3E-25 158.7 12.0 95 173-267 15-114 (127)
4 2cg9_X CO-chaperone protein SB 99.9 7.8E-23 2.7E-27 170.1 1.5 104 179-305 7-126 (134)
5 2xcm_C SGT1-like protein, cyto 99.8 2.5E-21 8.7E-26 150.8 9.8 87 181-267 5-91 (92)
6 1wh0_A Ubiquitin carboxyl-term 99.8 2.4E-21 8.1E-26 160.5 8.9 88 181-268 22-122 (134)
7 4gco_A Protein STI-1; structur 99.8 7.5E-20 2.6E-24 150.5 17.1 112 2-113 13-124 (126)
8 1rl1_A Suppressor of G2 allele 99.8 3.3E-20 1.1E-24 150.4 9.1 93 172-269 8-100 (114)
9 2hr2_A Hypothetical protein; a 99.8 3.5E-19 1.2E-23 151.9 9.9 120 1-120 10-152 (159)
10 2o30_A Nuclear movement protei 99.8 3.6E-19 1.2E-23 147.6 9.2 85 179-267 5-90 (131)
11 3upv_A Heat shock protein STI1 99.8 9.7E-18 3.3E-22 136.3 15.6 116 2-117 4-125 (126)
12 3rkv_A Putative peptidylprolyl 99.8 6.4E-18 2.2E-22 143.8 14.9 120 2-121 11-149 (162)
13 3sz7_A HSC70 cochaperone (SGT) 99.8 3E-17 1E-21 139.9 18.5 121 2-122 11-133 (164)
14 2jtt_C Calcyclin-binding prote 99.7 1.9E-19 6.5E-24 110.7 1.6 32 317-348 4-35 (35)
15 3gyz_A Chaperone protein IPGC; 99.7 5.1E-17 1.7E-21 138.1 16.3 103 2-104 36-138 (151)
16 4gcn_A Protein STI-1; structur 99.7 4.9E-17 1.7E-21 133.5 15.0 111 2-113 8-125 (127)
17 1wgv_A KIAA1068 protein; CS do 99.7 1.3E-17 4.3E-22 137.0 11.3 90 180-269 21-113 (124)
18 2vgx_A Chaperone SYCD; alterna 99.7 1.5E-16 5E-21 134.3 16.5 118 3-120 22-139 (148)
19 2xcb_A PCRH, regulatory protei 99.7 1.6E-16 5.6E-21 132.4 16.0 118 3-120 19-136 (142)
20 4ga2_A E3 SUMO-protein ligase 99.7 1.3E-16 4.4E-21 134.8 12.6 112 4-115 33-145 (150)
21 3q49_B STIP1 homology and U bo 99.7 1.6E-15 5.5E-20 124.1 16.1 119 2-120 9-132 (137)
22 2fbn_A 70 kDa peptidylprolyl i 99.7 3.9E-15 1.3E-19 130.6 17.5 121 2-122 38-174 (198)
23 2rh0_A NUDC domain-containing 99.6 2.6E-16 8.9E-21 134.1 8.8 84 180-267 15-103 (157)
24 1hxi_A PEX5, peroxisome target 99.6 1.9E-15 6.4E-20 123.0 13.4 102 4-105 19-120 (121)
25 1elw_A TPR1-domain of HOP; HOP 99.6 8.5E-15 2.9E-19 115.3 16.8 114 2-115 4-117 (118)
26 1wfi_A Nuclear distribution ge 99.6 1.1E-15 3.8E-20 126.6 11.8 86 180-268 9-99 (131)
27 3urz_A Uncharacterized protein 99.6 3.7E-15 1.3E-19 132.5 15.8 117 2-118 4-136 (208)
28 1p5q_A FKBP52, FK506-binding p 99.6 6.2E-15 2.1E-19 141.2 18.0 119 2-120 147-280 (336)
29 2lni_A Stress-induced-phosphop 99.6 4.6E-15 1.6E-19 119.8 14.3 116 2-117 16-131 (133)
30 2xev_A YBGF; tetratricopeptide 99.6 6.7E-15 2.3E-19 119.1 14.9 116 1-116 1-122 (129)
31 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 4.4E-15 1.5E-19 148.2 16.7 119 2-120 268-401 (457)
32 2vyi_A SGTA protein; chaperone 99.6 2.3E-14 7.8E-19 114.8 17.4 118 2-119 12-129 (131)
33 3qor_A Nuclear migration prote 99.6 1.9E-15 6.4E-20 123.3 10.1 86 181-269 19-109 (121)
34 2dba_A Smooth muscle cell asso 99.6 1.5E-14 5.3E-19 119.1 15.7 113 2-114 28-143 (148)
35 1a17_A Serine/threonine protei 99.6 5.5E-14 1.9E-18 118.1 18.1 113 2-114 13-125 (166)
36 4gyw_A UDP-N-acetylglucosamine 99.6 1.1E-14 3.9E-19 153.0 16.4 118 2-119 9-126 (723)
37 1elr_A TPR2A-domain of HOP; HO 99.6 3.7E-14 1.3E-18 113.7 15.7 118 2-120 4-128 (131)
38 1ihg_A Cyclophilin 40; ppiase 99.6 1.4E-14 4.6E-19 140.9 14.9 119 2-120 223-357 (370)
39 2pl2_A Hypothetical conserved 99.6 2.2E-14 7.5E-19 128.2 14.9 117 3-119 6-133 (217)
40 1na0_A Designed protein CTPR3; 99.6 1.7E-13 5.8E-18 108.7 17.2 115 2-116 9-123 (125)
41 4i17_A Hypothetical protein; T 99.6 9.8E-14 3.3E-18 123.9 17.5 112 2-113 7-119 (228)
42 4ga2_A E3 SUMO-protein ligase 99.6 2.6E-15 8.8E-20 126.7 6.8 114 7-120 2-115 (150)
43 2h6f_A Protein farnesyltransfe 99.6 3.3E-14 1.1E-18 138.8 14.6 119 2-120 97-216 (382)
44 3vtx_A MAMA; tetratricopeptide 99.6 1.2E-13 4.3E-18 118.8 16.4 115 2-116 5-119 (184)
45 4gyw_A UDP-N-acetylglucosamine 99.6 5.4E-14 1.8E-18 147.9 16.8 118 2-119 43-160 (723)
46 2pl2_A Hypothetical conserved 99.5 1.2E-13 4.1E-18 123.4 16.3 118 2-120 39-167 (217)
47 2h6f_A Protein farnesyltransfe 99.5 4.3E-14 1.5E-18 137.9 13.9 115 2-116 131-246 (382)
48 2if4_A ATFKBP42; FKBP-like, al 99.5 1.2E-14 4E-19 139.4 9.5 118 2-119 179-313 (338)
49 1zu2_A Mitochondrial import re 99.5 3.5E-14 1.2E-18 120.7 10.9 107 12-118 12-139 (158)
50 2kck_A TPR repeat; tetratricop 99.5 9.5E-14 3.3E-18 108.3 11.6 102 3-104 7-111 (112)
51 2c2l_A CHIP, carboxy terminus 99.5 1.6E-13 5.3E-18 127.9 14.7 102 2-103 4-105 (281)
52 4i17_A Hypothetical protein; T 99.5 3.1E-13 1.1E-17 120.6 15.9 118 3-120 43-169 (228)
53 2e2e_A Formate-dependent nitri 99.5 5.7E-13 2E-17 114.2 16.4 115 2-116 44-161 (177)
54 3urz_A Uncharacterized protein 99.5 7.1E-13 2.4E-17 117.5 17.4 106 8-114 60-200 (208)
55 3k9i_A BH0479 protein; putativ 99.5 3.4E-14 1.2E-18 114.1 7.6 101 14-114 2-105 (117)
56 3vtx_A MAMA; tetratricopeptide 99.5 1.6E-12 5.6E-17 111.7 16.4 119 2-120 39-157 (184)
57 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.3E-12 1.1E-16 112.1 17.3 103 3-105 38-156 (213)
58 1wao_1 Serine/threonine protei 99.4 2E-13 6.8E-18 137.0 10.4 115 3-117 7-121 (477)
59 2fo7_A Synthetic consensus TPR 99.4 3E-12 1E-16 102.3 15.4 116 3-118 2-117 (136)
60 3uq3_A Heat shock protein STI1 99.4 1.7E-12 5.9E-17 116.3 15.2 111 3-113 140-256 (258)
61 1xnf_A Lipoprotein NLPI; TPR, 99.4 4E-12 1.4E-16 115.4 17.4 112 2-113 43-154 (275)
62 3qky_A Outer membrane assembly 99.4 1.5E-12 5E-17 118.9 14.4 106 2-107 15-134 (261)
63 3gyz_A Chaperone protein IPGC; 99.4 7.3E-14 2.5E-18 118.5 5.2 101 20-120 20-120 (151)
64 2l6j_A TPR repeat-containing p 99.4 1.4E-13 4.9E-18 107.9 5.8 94 2-95 4-103 (111)
65 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.9E-12 9.9E-17 112.5 14.3 115 3-120 7-137 (213)
66 3as5_A MAMA; tetratricopeptide 99.4 8.7E-12 3E-16 105.6 16.6 117 3-119 43-159 (186)
67 3ieg_A DNAJ homolog subfamily 99.4 1.5E-11 5E-16 115.4 18.3 116 5-120 237-356 (359)
68 4abn_A Tetratricopeptide repea 99.4 3.6E-12 1.2E-16 127.6 14.5 118 3-120 171-308 (474)
69 2kat_A Uncharacterized protein 99.4 8.3E-12 2.9E-16 99.3 13.7 102 19-120 2-105 (115)
70 2yhc_A BAMD, UPF0169 lipoprote 99.4 9.2E-12 3.2E-16 111.5 15.6 107 2-108 4-134 (225)
71 2vsy_A XCC0866; transferase, g 99.4 7.4E-12 2.5E-16 127.6 16.5 116 2-117 23-138 (568)
72 1fch_A Peroxisomal targeting s 99.4 8.5E-12 2.9E-16 118.3 15.8 119 2-120 217-346 (368)
73 2q7f_A YRRB protein; TPR, prot 99.4 2.1E-11 7.2E-16 108.5 17.3 117 3-119 58-174 (243)
74 3as5_A MAMA; tetratricopeptide 99.4 7.1E-12 2.4E-16 106.1 13.6 119 2-120 8-126 (186)
75 3uq3_A Heat shock protein STI1 99.4 8.2E-12 2.8E-16 111.8 14.6 119 2-120 79-223 (258)
76 4abn_A Tetratricopeptide repea 99.4 4.4E-12 1.5E-16 126.9 13.6 115 2-117 102-226 (474)
77 3ieg_A DNAJ homolog subfamily 99.4 1.4E-11 4.9E-16 115.4 16.4 110 2-111 3-115 (359)
78 2q7f_A YRRB protein; TPR, prot 99.4 1.6E-11 5.4E-16 109.3 15.8 118 3-120 92-209 (243)
79 4gco_A Protein STI-1; structur 99.4 2.5E-12 8.5E-17 105.2 9.6 94 27-120 4-97 (126)
80 2pzi_A Probable serine/threoni 99.4 1.7E-12 5.7E-17 135.8 10.8 117 3-120 434-550 (681)
81 4eqf_A PEX5-related protein; a 99.4 7.7E-12 2.6E-16 119.1 14.4 118 3-120 214-343 (365)
82 3qou_A Protein YBBN; thioredox 99.4 1.1E-11 3.9E-16 115.5 15.1 118 3-120 118-271 (287)
83 3qky_A Outer membrane assembly 99.3 1.3E-11 4.5E-16 112.5 14.9 116 2-117 52-198 (261)
84 3u4t_A TPR repeat-containing p 99.3 1E-11 3.6E-16 112.7 13.8 117 3-119 75-191 (272)
85 2vq2_A PILW, putative fimbrial 99.3 2.8E-11 9.6E-16 106.0 16.0 117 3-119 9-128 (225)
86 2fo7_A Synthetic consensus TPR 99.3 3.3E-11 1.1E-15 96.1 14.9 101 3-103 36-136 (136)
87 2vgx_A Chaperone SYCD; alterna 99.3 1.9E-12 6.5E-17 108.8 7.6 100 21-120 6-105 (148)
88 3u4t_A TPR repeat-containing p 99.3 6E-12 2.1E-16 114.3 11.3 119 2-120 3-124 (272)
89 2pzi_A Probable serine/threoni 99.3 3.5E-12 1.2E-16 133.4 10.7 112 2-114 467-578 (681)
90 4eqf_A PEX5-related protein; a 99.3 1.2E-11 4.2E-16 117.7 13.3 116 5-120 180-297 (365)
91 2vq2_A PILW, putative fimbrial 99.3 4.2E-11 1.4E-15 104.9 15.7 118 3-120 43-163 (225)
92 2ho1_A Type 4 fimbrial biogene 99.3 2.2E-11 7.6E-16 109.4 14.2 115 3-117 38-154 (252)
93 2ho1_A Type 4 fimbrial biogene 99.3 3.2E-11 1.1E-15 108.4 15.1 117 3-119 72-190 (252)
94 2r5s_A Uncharacterized protein 99.3 1.5E-11 5.1E-16 105.7 12.3 116 4-119 8-159 (176)
95 1w3b_A UDP-N-acetylglucosamine 99.3 2.3E-11 7.7E-16 117.0 14.2 117 3-119 238-354 (388)
96 2gw1_A Mitochondrial precursor 99.3 5.1E-11 1.8E-15 117.8 17.1 103 2-105 6-108 (514)
97 3cv0_A Peroxisome targeting si 99.3 4E-11 1.4E-15 111.2 15.3 118 3-120 173-302 (327)
98 2y4t_A DNAJ homolog subfamily 99.3 6.3E-11 2.2E-15 115.6 17.4 109 2-110 26-137 (450)
99 3hym_B Cell division cycle pro 99.3 3.3E-11 1.1E-15 111.9 14.4 114 2-115 193-315 (330)
100 2y4t_A DNAJ homolog subfamily 99.3 8.3E-11 2.8E-15 114.7 17.7 116 5-120 260-379 (450)
101 1w3b_A UDP-N-acetylglucosamine 99.3 5.1E-11 1.7E-15 114.5 15.8 116 4-119 171-286 (388)
102 2yhc_A BAMD, UPF0169 lipoprote 99.3 3.2E-11 1.1E-15 108.0 13.1 118 3-120 42-200 (225)
103 2e2e_A Formate-dependent nitri 99.3 7.2E-12 2.5E-16 107.2 8.5 113 8-120 16-131 (177)
104 3hym_B Cell division cycle pro 99.3 5.5E-11 1.9E-15 110.4 15.1 117 3-119 91-208 (330)
105 1na3_A Designed protein CTPR2; 99.3 9.1E-11 3.1E-15 88.3 12.7 80 4-83 11-90 (91)
106 2xcb_A PCRH, regulatory protei 99.3 1E-11 3.6E-16 102.9 8.1 98 23-120 5-102 (142)
107 2kc7_A BFR218_protein; tetratr 99.3 1.5E-11 5.2E-16 94.8 8.4 92 5-104 3-95 (99)
108 1fch_A Peroxisomal targeting s 99.3 7.9E-11 2.7E-15 111.6 15.0 105 3-107 65-169 (368)
109 3mkr_A Coatomer subunit epsilo 99.2 1.6E-10 5.4E-15 108.1 15.5 111 4-114 132-244 (291)
110 3mkr_A Coatomer subunit epsilo 99.2 1.5E-10 5.3E-15 108.2 15.4 102 11-112 175-277 (291)
111 3fp2_A TPR repeat-containing p 99.2 4.2E-11 1.4E-15 119.4 11.9 103 2-105 25-127 (537)
112 1p5q_A FKBP52, FK506-binding p 99.2 1.1E-10 3.7E-15 111.5 14.0 96 2-97 196-292 (336)
113 3cv0_A Peroxisome targeting si 99.2 1.9E-10 6.6E-15 106.6 14.4 107 3-109 22-128 (327)
114 1xnf_A Lipoprotein NLPI; TPR, 99.2 6.1E-10 2.1E-14 100.8 17.4 104 2-105 77-250 (275)
115 1a17_A Serine/threonine protei 99.2 2.7E-10 9.1E-15 95.2 13.9 97 3-99 48-146 (166)
116 1qqe_A Vesicular transport pro 99.2 1.3E-10 4.6E-15 108.2 12.3 104 2-105 77-193 (292)
117 3fp2_A TPR repeat-containing p 99.2 1.7E-10 5.9E-15 114.9 13.7 116 4-119 278-393 (537)
118 2vsy_A XCC0866; transferase, g 99.2 3.1E-10 1E-14 115.6 15.4 104 2-105 57-163 (568)
119 1qqe_A Vesicular transport pro 99.2 1.8E-10 6.2E-15 107.3 12.2 105 2-106 117-235 (292)
120 3ma5_A Tetratricopeptide repea 99.2 2.6E-10 9E-15 88.8 11.1 74 31-104 2-75 (100)
121 4g1t_A Interferon-induced prot 99.2 8E-10 2.8E-14 108.6 17.1 119 2-120 51-188 (472)
122 3edt_B KLC 2, kinesin light ch 99.1 1.4E-10 4.8E-15 104.8 10.6 119 2-120 43-185 (283)
123 2l6j_A TPR repeat-containing p 99.1 5E-10 1.7E-14 87.3 12.0 86 35-120 3-94 (111)
124 3upv_A Heat shock protein STI1 99.1 2.8E-10 9.6E-15 91.6 10.5 87 34-120 2-88 (126)
125 4gcn_A Protein STI-1; structur 99.1 1.8E-10 6.3E-15 93.9 9.3 79 36-114 8-86 (127)
126 1na3_A Designed protein CTPR2; 99.1 4.7E-10 1.6E-14 84.3 10.9 84 34-117 7-90 (91)
127 2xpi_A Anaphase-promoting comp 99.1 9.5E-10 3.2E-14 111.3 15.9 116 4-119 443-565 (597)
128 2xpi_A Anaphase-promoting comp 99.1 1.8E-09 6.1E-14 109.3 16.0 117 3-119 374-490 (597)
129 2vyi_A SGTA protein; chaperone 99.1 1.2E-09 3.9E-14 86.9 11.6 84 3-86 47-130 (131)
130 1hxi_A PEX5, peroxisome target 99.1 1.5E-09 5E-14 87.7 12.3 83 38-120 19-101 (121)
131 2gw1_A Mitochondrial precursor 99.1 8.8E-10 3E-14 108.9 13.2 113 3-115 373-494 (514)
132 2fbn_A 70 kDa peptidylprolyl i 99.1 8.6E-10 2.9E-14 96.2 11.4 95 3-97 89-184 (198)
133 4a1s_A PINS, partner of inscut 99.1 8.1E-10 2.8E-14 106.5 12.3 118 2-119 48-181 (411)
134 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 6.4E-10 2.2E-14 110.7 11.8 91 2-92 317-407 (457)
135 3sz7_A HSC70 cochaperone (SGT) 99.1 8.2E-10 2.8E-14 93.3 10.7 89 32-120 7-95 (164)
136 3q49_B STIP1 homology and U bo 99.1 1.6E-09 5.6E-14 87.8 12.0 91 30-120 3-93 (137)
137 3rkv_A Putative peptidylprolyl 99.0 8.7E-10 3E-14 93.0 10.4 86 3-88 64-150 (162)
138 2ond_A Cleavage stimulation fa 99.0 1.4E-09 4.9E-14 101.8 12.9 114 3-116 100-215 (308)
139 3edt_B KLC 2, kinesin light ch 99.0 6.1E-10 2.1E-14 100.6 9.8 98 2-99 85-198 (283)
140 1dce_A Protein (RAB geranylger 99.0 3.1E-09 1E-13 108.8 16.0 117 2-118 63-192 (567)
141 3ro2_A PINS homolog, G-protein 99.0 1.6E-09 5.5E-14 99.9 12.7 117 3-119 6-138 (338)
142 2if4_A ATFKBP42; FKBP-like, al 99.0 1.9E-10 6.7E-15 109.9 6.6 102 4-105 232-334 (338)
143 1wao_1 Serine/threonine protei 99.0 3.4E-10 1.2E-14 113.5 8.6 102 2-103 40-154 (477)
144 2lni_A Stress-induced-phosphop 99.0 1.7E-09 5.7E-14 86.6 10.9 83 3-85 51-133 (133)
145 2ond_A Cleavage stimulation fa 99.0 3.8E-09 1.3E-13 98.9 14.5 106 3-108 51-172 (308)
146 3sf4_A G-protein-signaling mod 99.0 1.7E-09 5.9E-14 103.2 12.1 118 2-119 9-142 (406)
147 1ouv_A Conserved hypothetical 99.0 1.1E-08 3.8E-13 93.3 17.0 109 2-116 6-122 (273)
148 2kck_A TPR repeat; tetratricop 99.0 6.5E-10 2.2E-14 86.1 7.5 88 32-119 2-92 (112)
149 3dra_A Protein farnesyltransfe 99.0 5.4E-09 1.8E-13 98.7 15.0 117 3-119 104-235 (306)
150 3k9i_A BH0479 protein; putativ 99.0 2.5E-09 8.5E-14 85.3 10.9 76 2-77 27-102 (117)
151 1pc2_A Mitochondria fission pr 99.0 4.2E-09 1.4E-13 88.5 12.6 104 17-120 13-121 (152)
152 3ro3_A PINS homolog, G-protein 99.0 1.4E-09 4.8E-14 89.4 9.7 100 2-101 9-120 (164)
153 3dra_A Protein farnesyltransfe 99.0 4.9E-09 1.7E-13 98.9 13.9 115 3-117 68-193 (306)
154 3nf1_A KLC 1, kinesin light ch 99.0 1.5E-09 5.2E-14 99.7 10.0 118 3-120 70-211 (311)
155 3ulq_A Response regulator aspa 99.0 1.6E-09 5.5E-14 104.2 10.2 117 2-118 143-278 (383)
156 3u3w_A Transcriptional activat 99.0 1.3E-09 4.6E-14 101.2 9.3 98 3-100 156-267 (293)
157 2hr2_A Hypothetical protein; a 99.0 2.1E-09 7.2E-14 91.3 9.4 85 36-120 11-118 (159)
158 2ifu_A Gamma-SNAP; membrane fu 99.0 2.4E-09 8.3E-14 100.4 10.8 101 2-104 116-228 (307)
159 2kc7_A BFR218_protein; tetratr 99.0 4.1E-09 1.4E-13 80.9 10.3 69 39-107 3-72 (99)
160 1ihg_A Cyclophilin 40; ppiase 99.0 4.2E-09 1.4E-13 102.0 12.7 90 3-92 274-363 (370)
161 3ma5_A Tetratricopeptide repea 99.0 4E-09 1.4E-13 82.0 10.2 83 2-84 7-91 (100)
162 2qfc_A PLCR protein; TPR, HTH, 98.9 4E-09 1.4E-13 97.9 11.5 99 2-100 155-267 (293)
163 3nf1_A KLC 1, kinesin light ch 98.9 2.6E-09 8.7E-14 98.2 9.7 97 3-99 112-224 (311)
164 3ro3_A PINS homolog, G-protein 98.9 4.6E-09 1.6E-13 86.2 10.3 100 3-102 50-161 (164)
165 2r5s_A Uncharacterized protein 98.9 9.7E-09 3.3E-13 87.9 12.5 80 19-98 91-172 (176)
166 1na0_A Designed protein CTPR3; 98.9 1.7E-08 5.7E-13 79.3 12.7 82 3-84 44-125 (125)
167 3gw4_A Uncharacterized protein 98.9 2.9E-09 1E-13 92.0 8.9 99 2-100 26-137 (203)
168 2c2l_A CHIP, carboxy terminus 98.9 3.2E-09 1.1E-13 98.5 9.6 116 2-117 38-182 (281)
169 1dce_A Protein (RAB geranylger 98.9 7.8E-09 2.7E-13 105.8 13.2 113 3-115 108-237 (567)
170 2qfc_A PLCR protein; TPR, HTH, 98.9 1.5E-08 5E-13 94.1 14.0 114 5-118 118-250 (293)
171 3dss_A Geranylgeranyl transfer 98.9 3.3E-08 1.1E-12 94.1 16.3 116 3-118 65-193 (331)
172 3dss_A Geranylgeranyl transfer 98.9 2.9E-08 1E-12 94.5 16.0 111 3-113 109-236 (331)
173 1ouv_A Conserved hypothetical 98.9 5E-08 1.7E-12 88.9 17.0 106 3-114 39-156 (273)
174 3ulq_A Response regulator aspa 98.9 6.3E-09 2.2E-13 100.0 11.2 100 2-101 184-295 (383)
175 2ifu_A Gamma-SNAP; membrane fu 98.9 2.6E-09 9E-14 100.1 8.0 102 2-104 76-189 (307)
176 4g1t_A Interferon-induced prot 98.9 1.9E-08 6.4E-13 98.8 14.0 103 3-105 248-369 (472)
177 3u3w_A Transcriptional activat 98.9 4.2E-09 1.4E-13 97.8 8.9 113 6-118 119-250 (293)
178 4f3v_A ESX-1 secretion system 98.9 1E-08 3.5E-13 95.3 11.3 103 4-107 137-244 (282)
179 3q15_A PSP28, response regulat 98.9 1.6E-08 5.4E-13 97.2 12.9 101 2-102 182-293 (378)
180 3q7a_A Farnesyltransferase alp 98.9 4.7E-08 1.6E-12 93.6 15.8 109 12-120 64-175 (349)
181 3bee_A Putative YFRE protein; 98.9 3.6E-08 1.2E-12 76.1 12.3 76 32-107 2-80 (93)
182 1elw_A TPR1-domain of HOP; HOP 98.9 2.6E-08 9E-13 77.4 11.8 79 3-81 39-117 (118)
183 3sf4_A G-protein-signaling mod 98.9 8.4E-09 2.9E-13 98.4 10.7 118 3-120 228-363 (406)
184 1zu2_A Mitochondrial import re 98.9 8.5E-09 2.9E-13 87.4 9.1 69 2-70 36-125 (158)
185 3q15_A PSP28, response regulat 98.8 1.1E-08 3.7E-13 98.4 10.9 119 2-120 141-277 (378)
186 3n71_A Histone lysine methyltr 98.8 2.4E-08 8.4E-13 100.2 13.7 117 3-119 310-450 (490)
187 3qou_A Protein YBBN; thioredox 98.8 1.5E-08 5E-13 94.2 11.2 87 12-98 195-283 (287)
188 3q7a_A Farnesyltransferase alp 98.8 2.9E-08 9.9E-13 95.0 12.9 115 3-117 89-214 (349)
189 3rjv_A Putative SEL1 repeat pr 98.8 3.2E-08 1.1E-12 87.7 12.2 110 2-116 18-137 (212)
190 2dba_A Smooth muscle cell asso 98.8 3E-08 1E-12 80.8 11.1 90 31-120 23-115 (148)
191 2kat_A Uncharacterized protein 98.8 3.1E-08 1.1E-12 78.3 10.9 84 2-85 19-104 (115)
192 2xev_A YBGF; tetratricopeptide 98.8 6.1E-08 2.1E-12 77.5 12.7 82 3-84 40-124 (129)
193 4a1s_A PINS, partner of inscut 98.8 4.8E-09 1.6E-13 101.0 6.8 99 3-101 224-334 (411)
194 3qww_A SET and MYND domain-con 98.8 2.5E-08 8.6E-13 98.5 11.7 110 4-113 300-430 (433)
195 3rjv_A Putative SEL1 repeat pr 98.8 3.7E-08 1.3E-12 87.3 11.2 110 2-115 50-173 (212)
196 3ro2_A PINS homolog, G-protein 98.8 8.7E-09 3E-13 94.9 7.2 117 3-119 184-318 (338)
197 2v5f_A Prolyl 4-hydroxylase su 98.7 9.8E-08 3.3E-12 74.9 11.5 76 2-77 5-87 (104)
198 3gw4_A Uncharacterized protein 98.7 3E-08 1E-12 85.5 9.4 118 2-120 66-196 (203)
199 3qwp_A SET and MYND domain-con 98.7 9.4E-08 3.2E-12 94.4 13.4 113 3-115 288-421 (429)
200 1elr_A TPR2A-domain of HOP; HO 98.7 4.9E-08 1.7E-12 77.4 8.1 85 35-119 3-94 (131)
201 2ooe_A Cleavage stimulation fa 98.6 1.5E-07 5.3E-12 94.6 12.6 114 3-116 322-437 (530)
202 2v5f_A Prolyl 4-hydroxylase su 98.6 4.6E-07 1.6E-11 71.0 12.5 86 35-120 4-96 (104)
203 4f3v_A ESX-1 secretion system 98.6 5.1E-08 1.7E-12 90.6 7.8 115 5-120 105-224 (282)
204 2ooe_A Cleavage stimulation fa 98.6 3.6E-07 1.2E-11 91.9 14.3 107 3-109 273-395 (530)
205 1nzn_A CGI-135 protein, fissio 98.6 3.7E-07 1.3E-11 74.0 11.4 108 12-119 11-123 (126)
206 3ly7_A Transcriptional activat 98.6 7.7E-07 2.6E-11 85.4 15.0 107 2-110 196-349 (372)
207 1klx_A Cysteine rich protein B 98.5 9.4E-07 3.2E-11 72.8 12.6 89 8-100 31-127 (138)
208 1hz4_A MALT regulatory protein 98.5 5.1E-07 1.8E-11 85.9 11.4 99 4-102 55-167 (373)
209 1hz4_A MALT regulatory protein 98.5 1E-06 3.5E-11 83.7 12.1 98 4-101 95-205 (373)
210 2xm6_A Protein corresponding t 98.4 1.3E-06 4.3E-11 87.0 12.7 106 3-112 329-448 (490)
211 3n71_A Histone lysine methyltr 98.4 7.7E-07 2.6E-11 89.2 8.9 98 2-99 351-464 (490)
212 2xm6_A Protein corresponding t 98.4 1E-05 3.4E-10 80.4 17.0 107 2-114 39-157 (490)
213 3u64_A Protein TP_0956; tetrat 98.3 3.6E-06 1.2E-10 77.9 11.2 86 18-103 179-273 (301)
214 3e4b_A ALGK; tetratricopeptide 98.3 5.2E-06 1.8E-10 82.1 13.4 107 4-115 178-294 (452)
215 3bee_A Putative YFRE protein; 98.3 3.2E-06 1.1E-10 65.0 9.0 68 2-69 6-76 (93)
216 1pc2_A Mitochondria fission pr 98.2 5.1E-06 1.7E-10 69.7 9.1 79 2-80 32-115 (152)
217 1klx_A Cysteine rich protein B 98.2 1.3E-05 4.6E-10 65.8 11.5 93 15-115 8-104 (138)
218 3e4b_A ALGK; tetratricopeptide 98.2 9.1E-06 3.1E-10 80.3 12.3 100 6-114 217-328 (452)
219 3mv2_B Coatomer subunit epsilo 98.2 1.3E-05 4.3E-10 75.4 12.2 99 4-102 102-210 (310)
220 3o48_A Mitochondria fission 1 98.2 2.1E-05 7.3E-10 63.9 11.3 99 21-120 26-128 (134)
221 1y8m_A FIS1; mitochondria, unk 98.1 7.2E-05 2.4E-09 61.6 14.0 88 33-120 36-127 (144)
222 1b89_A Protein (clathrin heavy 98.1 6.2E-06 2.1E-10 81.0 8.8 103 4-116 124-253 (449)
223 1xi4_A Clathrin heavy chain; a 98.1 1.7E-05 5.9E-10 87.1 12.6 105 3-115 1196-1325(1630)
224 4b4t_Q 26S proteasome regulato 98.1 1.4E-05 4.9E-10 77.1 10.9 98 4-101 57-206 (434)
225 3ffl_A Anaphase-promoting comp 98.0 1.9E-05 6.3E-10 66.8 9.3 109 4-113 22-164 (167)
226 3mv2_B Coatomer subunit epsilo 98.0 1.9E-05 6.4E-10 74.2 10.2 100 8-112 182-295 (310)
227 2k8q_A Protein SHQ1; beta-sand 98.0 5.9E-06 2E-10 67.1 5.3 84 177-265 2-91 (134)
228 3gla_A Low molecular weight he 98.0 3.9E-05 1.3E-09 59.6 9.5 79 179-257 5-98 (100)
229 4fei_A Heat shock protein-rela 97.9 9.2E-05 3.1E-09 57.8 10.1 79 180-258 8-96 (102)
230 4b4t_Q 26S proteasome regulato 97.9 4.8E-05 1.6E-09 73.3 10.1 98 2-99 135-245 (434)
231 1xi4_A Clathrin heavy chain; a 97.9 7.1E-05 2.4E-09 82.3 11.9 90 8-102 1055-1166(1630)
232 3eud_A Protein SHQ1; CS domain 97.8 0.0001 3.5E-09 57.8 8.9 86 175-265 14-105 (115)
233 3aab_A Putative uncharacterize 97.7 0.00015 5E-09 58.6 9.4 79 180-258 26-117 (123)
234 3qwp_A SET and MYND domain-con 97.6 8.2E-05 2.8E-09 73.2 7.5 82 2-83 329-426 (429)
235 4eld_A MJ16.5-P1, small heat s 97.6 0.00044 1.5E-08 58.6 10.2 78 181-258 59-152 (161)
236 1nzn_A CGI-135 protein, fissio 97.5 0.00034 1.2E-08 56.5 8.6 78 3-80 36-118 (126)
237 2wj5_A Heat shock protein beta 97.5 0.0004 1.4E-08 54.0 8.6 78 181-258 4-90 (101)
238 3u64_A Protein TP_0956; tetrat 97.5 0.0009 3.1E-08 61.8 12.1 81 32-112 148-247 (301)
239 3qww_A SET and MYND domain-con 97.5 0.00017 5.7E-09 71.1 7.4 70 2-71 340-422 (433)
240 1gme_A Heat shock protein 16.9 97.5 0.00049 1.7E-08 57.6 9.2 79 180-258 45-139 (151)
241 3ly7_A Transcriptional activat 97.4 0.00056 1.9E-08 65.5 9.0 70 4-74 279-348 (372)
242 4h7y_A Dual specificity protei 97.3 0.0057 2E-07 50.7 13.1 103 3-106 14-130 (161)
243 1y8m_A FIS1; mitochondria, unk 97.3 0.003 1E-07 51.8 11.2 78 3-80 40-121 (144)
244 1b89_A Protein (clathrin heavy 97.2 0.00043 1.5E-08 68.0 7.1 109 4-114 150-292 (449)
245 3o48_A Mitochondria fission 1 97.2 0.0024 8.1E-08 51.8 10.2 78 3-80 41-122 (134)
246 3l1e_A Alpha-crystallin A chai 97.2 0.0013 4.4E-08 51.5 8.2 78 181-258 5-91 (106)
247 2ff4_A Probable regulatory pro 97.2 0.0053 1.8E-07 59.4 14.3 95 4-98 117-233 (388)
248 3q9p_A Heat shock protein beta 97.2 0.0028 9.6E-08 47.5 9.6 73 184-256 3-84 (85)
249 4e6h_A MRNA 3'-END-processing 97.2 0.0022 7.6E-08 66.6 12.1 57 7-63 348-405 (679)
250 4e6h_A MRNA 3'-END-processing 97.1 0.0025 8.7E-08 66.2 11.5 99 4-102 436-536 (679)
251 3ffl_A Anaphase-promoting comp 97.1 0.002 6.7E-08 54.4 8.4 78 2-80 63-165 (167)
252 2y1y_A Alpha-crystallin B chai 96.9 0.0022 7.4E-08 48.6 6.9 73 185-257 3-84 (90)
253 2klr_A Alpha-crystallin B chai 96.6 0.004 1.4E-07 53.3 7.1 78 181-258 66-152 (175)
254 4gns_B Protein CSD3, chitin bi 96.4 0.0081 2.8E-07 62.8 8.7 79 19-97 302-398 (754)
255 2uy1_A Cleavage stimulation fa 96.3 0.051 1.7E-06 54.1 14.1 101 4-106 215-356 (493)
256 2bol_A TSP36, small heat shock 96.3 0.016 5.4E-07 54.2 9.7 78 181-258 101-190 (314)
257 1zbp_A Hypothetical protein VP 95.7 0.1 3.5E-06 47.4 11.8 63 9-71 4-66 (273)
258 2uy1_A Cleavage stimulation fa 95.6 0.15 5E-06 50.7 13.7 91 5-96 289-380 (493)
259 3kae_A CDC27, possible protein 95.6 0.23 7.9E-06 42.0 12.4 93 8-105 39-149 (242)
260 4gns_B Protein CSD3, chitin bi 95.2 0.057 2E-06 56.4 9.2 56 4-59 339-394 (754)
261 3txn_A 26S proteasome regulato 95.1 0.21 7.3E-06 48.1 12.3 93 7-99 104-210 (394)
262 4g26_A Pentatricopeptide repea 94.5 0.64 2.2E-05 46.2 14.5 103 5-107 108-214 (501)
263 1ya0_A SMG-7 transcript varian 94.5 0.25 8.7E-06 49.1 11.4 79 38-116 154-232 (497)
264 4b4t_R RPN7, 26S proteasome re 94.3 0.21 7.3E-06 48.6 10.4 98 4-101 133-239 (429)
265 1ya0_A SMG-7 transcript varian 94.0 0.22 7.6E-06 49.5 9.9 79 4-82 154-232 (497)
266 3mkq_B Coatomer subunit alpha; 93.4 0.95 3.2E-05 38.4 11.4 88 6-98 9-117 (177)
267 2ff4_A Probable regulatory pro 93.2 0.34 1.2E-05 46.5 9.6 61 4-64 173-233 (388)
268 1zbp_A Hypothetical protein VP 93.0 0.36 1.2E-05 43.8 8.6 75 45-119 6-81 (273)
269 4h7y_A Dual specificity protei 92.6 0.66 2.3E-05 38.4 8.8 73 12-85 70-142 (161)
270 4fhn_B Nucleoporin NUP120; pro 92.5 0.37 1.2E-05 53.0 9.6 92 5-96 845-964 (1139)
271 3kae_A CDC27, possible protein 91.5 5.8 0.0002 33.5 14.3 65 3-67 63-145 (242)
272 4b4t_P 26S proteasome regulato 91.4 2.2 7.5E-05 41.6 12.9 95 5-99 140-247 (445)
273 4g26_A Pentatricopeptide repea 91.2 2.6 8.9E-05 41.7 13.4 95 16-110 84-182 (501)
274 2bol_A TSP36, small heat shock 90.7 0.78 2.7E-05 42.7 8.4 71 186-256 231-313 (314)
275 3mkq_A Coatomer beta'-subunit; 90.6 1.9 6.6E-05 44.3 12.3 48 10-62 660-707 (814)
276 3mkq_A Coatomer beta'-subunit; 89.3 5.2 0.00018 41.1 14.3 26 3-28 682-707 (814)
277 3txn_A 26S proteasome regulato 87.8 6.2 0.00021 37.8 12.6 78 40-117 103-189 (394)
278 4b4t_S RPN3, 26S proteasome re 87.7 0.83 2.8E-05 45.4 6.5 67 36-104 231-304 (523)
279 3spa_A Mtrpol, DNA-directed RN 87.6 32 0.0011 37.2 18.7 96 5-100 130-231 (1134)
280 2w2u_A Hypothetical P60 katani 86.2 2.9 0.0001 30.7 7.3 30 2-31 19-48 (83)
281 2v6y_A AAA family ATPase, P60 86.0 3.1 0.00011 30.5 7.3 29 3-31 12-40 (83)
282 3mv2_A Coatomer subunit alpha; 81.4 6.4 0.00022 36.5 9.0 102 5-106 117-243 (325)
283 3mkq_B Coatomer subunit alpha; 80.8 5.5 0.00019 33.7 7.7 57 35-99 7-63 (177)
284 4a5x_A MITD1, MIT domain-conta 79.7 2.6 8.9E-05 31.1 4.7 29 3-31 17-45 (86)
285 2cfu_A SDSA1; SDS-hydrolase, l 79.7 3.3 0.00011 42.5 7.2 52 36-87 449-500 (658)
286 3mkr_B Coatomer subunit alpha; 78.9 25 0.00084 32.5 12.0 100 5-104 105-232 (320)
287 1wy6_A Hypothetical protein ST 78.9 8.4 0.00029 31.4 7.7 52 48-99 103-154 (172)
288 1wfd_A Hypothetical protein 15 75.9 3.8 0.00013 30.7 4.7 27 4-30 17-43 (93)
289 2v6x_A Vacuolar protein sortin 75.7 3.9 0.00013 29.9 4.7 27 4-30 15-41 (85)
290 2ijq_A Hypothetical protein; s 75.6 16 0.00053 30.3 8.8 55 44-98 40-103 (161)
291 2cpt_A SKD1 protein, vacuolar 74.7 3.7 0.00013 32.2 4.6 16 49-64 31-46 (117)
292 2vkj_A TM1634; membrane protei 74.4 11 0.00039 27.8 6.7 30 3-32 54-83 (106)
293 3t5v_B Nuclear mRNA export pro 73.1 7.9 0.00027 37.8 7.5 87 17-103 141-254 (455)
294 2p58_C Putative type III secre 72.2 22 0.00076 27.1 8.0 44 14-58 19-62 (116)
295 4gq2_M Nucleoporin NUP120; bet 72.0 21 0.00071 38.3 11.1 95 8-106 816-934 (950)
296 4fhn_B Nucleoporin NUP120; pro 71.3 19 0.00066 39.3 10.9 93 9-105 819-935 (1139)
297 2wpv_A GET4, UPF0363 protein Y 70.6 36 0.0012 31.3 11.0 27 68-94 132-158 (312)
298 4b4t_R RPN7, 26S proteasome re 70.5 7.2 0.00025 37.6 6.6 64 36-99 131-197 (429)
299 2crb_A Nuclear receptor bindin 69.9 6 0.0002 29.5 4.3 26 37-62 16-41 (97)
300 3ax2_A Mitochondrial import re 69.6 13 0.00044 26.5 6.0 38 74-111 21-58 (73)
301 4b4t_S RPN3, 26S proteasome re 68.0 7.2 0.00024 38.7 5.9 61 6-68 235-302 (523)
302 2crb_A Nuclear receptor bindin 66.1 9.6 0.00033 28.4 4.8 21 7-27 20-40 (97)
303 4gq2_M Nucleoporin NUP120; bet 64.9 21 0.00072 38.2 9.3 79 5-83 843-949 (950)
304 1qsa_A Protein (soluble lytic 63.1 22 0.00075 36.1 8.6 80 18-98 268-347 (618)
305 3ax2_A Mitochondrial import re 62.8 15 0.00053 26.1 5.3 29 7-35 22-50 (73)
306 2uwj_G Type III export protein 62.3 22 0.00074 27.1 6.2 79 9-93 13-91 (115)
307 3t5x_A PCI domain-containing p 62.1 18 0.00063 31.0 6.8 50 4-53 16-70 (203)
308 1qsa_A Protein (soluble lytic 61.9 45 0.0015 33.8 10.6 113 5-118 217-333 (618)
309 2ijq_A Hypothetical protein; s 60.3 33 0.0011 28.3 7.7 59 4-62 34-101 (161)
310 3lpz_A GET4 (YOR164C homolog); 59.9 1.1E+02 0.0036 28.5 11.9 26 68-93 134-159 (336)
311 3ph0_C ASCG; type III secretio 56.4 32 0.0011 23.1 5.5 49 41-90 11-60 (61)
312 2yhe_A SEC-alkyl sulfatase; hy 61.3 2.3 7.9E-05 43.8 0.0 53 37-89 462-514 (668)
313 2rpa_A Katanin P60 ATPase-cont 55.9 35 0.0012 24.5 6.2 28 72-99 14-41 (78)
314 4aez_C MAD3, mitotic spindle c 55.0 1.1E+02 0.0036 26.7 12.7 64 53-116 131-197 (223)
315 2w2u_A Hypothetical P60 katani 54.9 46 0.0016 24.1 6.9 25 91-115 47-71 (83)
316 3re2_A Predicted protein; meni 54.4 21 0.00072 33.6 6.0 24 73-96 299-322 (472)
317 3esl_A Checkpoint serine/threo 53.7 1.1E+02 0.0036 26.3 13.5 97 23-120 58-166 (202)
318 2rpa_A Katanin P60 ATPase-cont 53.5 13 0.00043 26.9 3.5 27 5-31 15-41 (78)
319 2v6y_A AAA family ATPase, P60 52.8 57 0.0019 23.5 7.2 31 89-119 37-67 (83)
320 2cwy_A Hypothetical protein TT 52.7 40 0.0014 25.0 6.4 27 6-32 5-31 (94)
321 4a5x_A MITD1, MIT domain-conta 51.7 53 0.0018 23.9 6.8 17 81-97 27-43 (86)
322 3t5x_A PCI domain-containing p 51.5 32 0.0011 29.4 6.5 34 70-103 14-47 (203)
323 2cfu_A SDSA1; SDS-hydrolase, l 51.4 28 0.00096 35.6 7.2 53 68-120 447-499 (658)
324 3u84_A Menin; MLL, JUND, ledgf 51.0 25 0.00085 33.8 6.0 46 20-65 297-347 (550)
325 1om2_A Protein (mitochondrial 49.8 20 0.00069 26.8 4.3 32 75-106 25-56 (95)
326 3qnk_A Putative lipoprotein; a 48.8 45 0.0015 32.8 8.0 64 36-99 109-211 (517)
327 4gq4_A Menin; tumor suppressor 48.2 77 0.0026 30.4 8.9 46 20-65 282-332 (489)
328 3hdx_A SUSD homolog, SUSD supe 47.2 52 0.0018 31.9 8.1 64 36-99 112-226 (478)
329 3re2_A Predicted protein; meni 46.3 64 0.0022 30.4 7.9 47 19-65 274-325 (472)
330 1wfd_A Hypothetical protein 15 45.6 72 0.0025 23.5 6.8 13 90-102 42-54 (93)
331 1wy6_A Hypothetical protein ST 44.8 1.2E+02 0.0043 24.5 11.2 24 9-32 14-37 (172)
332 2p58_C Putative type III secre 44.7 1E+02 0.0035 23.5 8.2 76 39-120 10-85 (116)
333 2v6x_A Vacuolar protein sortin 44.7 78 0.0027 22.7 6.8 13 83-95 26-38 (85)
334 2uwj_G Type III export protein 44.3 1E+02 0.0035 23.4 7.3 74 40-119 10-83 (115)
335 2vkj_A TM1634; membrane protei 43.8 89 0.0031 23.0 6.7 48 70-117 53-103 (106)
336 3jq1_A SUSD superfamily protei 43.7 44 0.0015 32.5 6.9 63 36-98 110-208 (481)
337 4b4t_P 26S proteasome regulato 42.9 2.3E+02 0.0078 27.0 16.5 77 37-113 138-223 (445)
338 3spa_A Mtrpol, DNA-directed RN 41.8 1.3E+02 0.0043 32.7 10.3 73 37-109 128-206 (1134)
339 4gq4_A Menin; tumor suppressor 41.4 1.9E+02 0.0064 27.8 10.3 65 35-99 261-332 (489)
340 2o8p_A 14-3-3 domain containin 40.6 1.8E+02 0.0063 25.2 9.9 52 13-64 136-196 (227)
341 1om2_A Protein (mitochondrial 40.2 35 0.0012 25.5 4.2 26 42-67 26-51 (95)
342 3i4g_A SUSD-like carbohydrate 39.9 72 0.0025 31.4 7.9 64 36-99 123-227 (528)
343 4b4t_O 26S proteasome regulato 39.1 1.3E+02 0.0045 28.2 9.4 88 11-98 85-197 (393)
344 4a1g_A Mitotic checkpoint seri 38.1 1.4E+02 0.0048 24.2 8.0 50 53-102 82-133 (152)
345 3t5v_B Nuclear mRNA export pro 37.9 67 0.0023 31.2 7.1 61 9-69 183-254 (455)
346 1sz9_A PCF11 protein; RNA poly 37.8 20 0.00069 28.9 2.9 24 320-343 85-108 (144)
347 2pmr_A Uncharacterized protein 37.6 29 0.001 25.5 3.4 37 18-62 29-65 (87)
348 3u84_A Menin; MLL, JUND, ledgf 37.5 1E+02 0.0034 29.7 7.8 64 36-99 277-347 (550)
349 2oo2_A Hypothetical protein AF 37.3 30 0.001 25.4 3.4 25 1-25 34-58 (86)
350 2cpt_A SKD1 protein, vacuolar 36.6 45 0.0015 25.9 4.6 11 53-63 16-26 (117)
351 2dl1_A Spartin; SPG20, MIT, st 35.4 54 0.0018 25.5 4.7 43 51-101 18-60 (116)
352 3qtm_A Uncharacterized protein 34.5 2.6E+02 0.0088 25.2 11.7 116 5-120 25-169 (346)
353 3myv_A SUSD superfamily protei 33.2 77 0.0026 30.4 6.8 47 52-98 164-218 (454)
354 3lvg_A Clathrin heavy chain 1; 33.1 0.11 3.7E-06 51.4 -13.4 98 5-115 147-274 (624)
355 3ckc_A SUSD; TPR repeat, carbo 33.1 1.7E+02 0.0057 28.3 9.4 63 36-98 129-231 (527)
356 2xze_A STAM-binding protein; h 32.6 53 0.0018 26.5 4.6 30 2-31 40-69 (146)
357 3kez_A Putative sugar binding 30.5 85 0.0029 30.2 6.6 47 52-98 170-224 (461)
358 2br9_A 14-3-3E, 14-3-3 protein 30.4 68 0.0023 28.1 5.2 14 83-96 186-199 (234)
359 3otn_A SUSD superfamily protei 30.4 68 0.0023 31.1 5.9 64 36-99 116-226 (482)
360 3lew_A SUSD-like carbohydrate 29.7 1.1E+02 0.0038 29.7 7.3 48 52-99 174-232 (495)
361 2ymb_A MITD1, MIT domain-conta 28.3 12 0.00042 33.4 0.0 28 4-31 25-52 (257)
362 3isy_A Bsupi, intracellular pr 27.8 79 0.0027 24.6 4.6 53 182-234 12-67 (120)
363 3may_A RV0203, possible export 27.4 38 0.0013 25.6 2.6 32 320-351 31-62 (101)
364 3clj_A Protein NRD1; CTD-inter 27.4 31 0.0011 28.4 2.3 23 320-342 100-122 (157)
365 2wvi_A Mitotic checkpoint seri 27.2 2.6E+02 0.0088 22.9 11.5 50 53-102 77-128 (164)
366 1o9d_A 14-3-3-like protein C; 26.9 84 0.0029 28.0 5.2 13 83-95 191-203 (260)
367 2e2a_A Protein (enzyme IIA); h 26.6 80 0.0027 24.0 4.4 29 2-30 20-48 (105)
368 3lxu_X Tripeptidyl-peptidase 2 26.6 3.5E+02 0.012 30.1 10.9 42 48-90 1296-1337(1354)
369 1wcr_A PTS system, N, N'-diace 25.9 84 0.0029 23.8 4.4 29 2-30 18-46 (103)
370 3mcx_A SUSD superfamily protei 25.6 95 0.0032 30.0 5.9 48 52-99 176-231 (477)
371 2dl1_A Spartin; SPG20, MIT, st 25.4 93 0.0032 24.1 4.5 47 14-68 15-61 (116)
372 3myv_A SUSD superfamily protei 25.3 1.6E+02 0.0056 28.1 7.5 48 18-65 164-219 (454)
373 4a1g_A Mitotic checkpoint seri 24.8 2.8E+02 0.0094 22.4 8.9 49 21-69 84-134 (152)
374 3uzd_A 14-3-3 protein gamma; s 24.7 99 0.0034 27.4 5.2 14 83-96 187-200 (248)
375 2npm_A 14-3-3 domain containin 24.5 1.5E+02 0.0052 26.3 6.5 44 20-63 174-225 (260)
376 2wvi_A Mitotic checkpoint seri 24.5 2.9E+02 0.0099 22.6 9.1 48 21-68 79-128 (164)
377 3k1s_A PTS system, cellobiose- 24.5 91 0.0031 23.8 4.4 29 2-30 22-50 (109)
378 3ubw_A 14-3-3E, 14-3-3 protein 24.3 1E+02 0.0035 27.5 5.2 13 50-62 213-225 (261)
379 2cwy_A Hypothetical protein TT 23.9 1.8E+02 0.006 21.4 5.8 57 40-98 5-67 (94)
380 3jys_A SUSD superfamily protei 23.7 1.5E+02 0.0051 28.9 7.0 63 36-98 120-222 (499)
381 4aez_C MAD3, mitotic spindle c 23.6 3.6E+02 0.012 23.3 9.1 49 20-68 132-182 (223)
382 3l8r_A PTCA, putative PTS syst 23.4 96 0.0033 24.2 4.4 29 2-30 37-65 (120)
383 3kez_A Putative sugar binding 22.0 1.9E+02 0.0065 27.6 7.3 47 19-65 171-225 (461)
384 2yhe_A SEC-alkyl sulfatase; hy 27.3 19 0.00066 36.9 0.0 52 69-120 460-511 (668)
385 2qx5_A Nucleoporin NIC96; mRNA 21.7 1.9E+02 0.0067 29.4 7.5 32 71-103 537-570 (661)
386 3iqu_A 14-3-3 protein sigma; s 21.6 1.1E+02 0.0038 26.8 4.9 44 19-62 150-202 (236)
387 3lew_A SUSD-like carbohydrate 21.4 2.1E+02 0.0071 27.7 7.5 48 19-66 175-233 (495)
388 1q0v_A Hydrophilic protein; ha 21.2 32 0.0011 24.9 1.0 22 332-353 11-32 (81)
389 3ph0_C ASCG; type III secretio 20.3 2E+02 0.0069 19.2 5.5 51 5-56 9-60 (61)
390 3mcx_A SUSD superfamily protei 20.2 1.9E+02 0.0067 27.7 7.0 49 18-66 176-232 (477)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.89 E-value=1.5e-24 Score=183.48 Aligned_cols=105 Identities=25% Similarity=0.369 Sum_probs=91.2
Q ss_pred ccccccccCCeEEEEEEeCCCCCCceEEEEe-ecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 016973 179 LMHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 257 (379)
Q Consensus 179 ~~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 257 (379)
+.|+||||.+.|+|+|+++++ ++++|+|+ +++|+|++...+|..|.+.++||++|+|+ |+|+|++++|+|+|+|++
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECC
Confidence 459999999999999999987 58999999 79999998866677899999999999999 999999999999999999
Q ss_pred CCCCCccccCCCccCCCccCCCCCCCCCC-CCCCCCCCCCCCchhHHHHHh
Q 016973 258 PIQWSSLEFSKGAVVPQRVNPPSVSGSPR-PTYPSSKPTRVDWDKLEAQVK 307 (379)
Q Consensus 258 ~~~W~~L~~~~~~~~~~~~~~~~~~~~~~-~~~p~s~~~~~dWdk~~~~~~ 307 (379)
+..|++|++.. .+ +.|. ++|||||.+|.+
T Consensus 82 ~~~W~rL~k~~----------------~K~~~~l-----k~Dwdkw~dede 111 (150)
T 2kmw_A 82 RSWWTRLLKSE----------------EKPAPYI-----KVDWNKWCDEDE 111 (150)
T ss_dssp SSCCSCSBSCC----------------SSCCTTE-----EECSSSSCCSSC
T ss_pred CCcCcccccCC----------------cccCccc-----cccchhcCCchh
Confidence 99999999752 22 3343 679999996543
No 2
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.88 E-value=3.5e-23 Score=170.46 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=89.4
Q ss_pred cccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEc-CCCceeeeccccccccccCcceEEEeCcEEEEEEeecCC
Q 016973 180 MHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 258 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~-~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~ 258 (379)
.|+||||.+.|+|+|+++++ +++.|+|++++|+|++.. .+|..|.+.++||++|+|++|+|+|++++|+|+|+|++.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 48999999999999999985 799999999999999875 467789999999999999999999999999999999986
Q ss_pred -CCCCccccCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 016973 259 -IQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 305 (379)
Q Consensus 259 -~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~dWdk~~~~ 305 (379)
..|++|++.. .++.+. ++|||||.++
T Consensus 83 ~~~W~rL~~~~----------------~K~~~l-----k~D~dkw~de 109 (125)
T 1ejf_A 83 GQSWPRLTKER----------------AKLNWL-----SVDFNNWKDW 109 (125)
T ss_dssp TCCCSSSBSSC----------------CCCTTE-----EECTTTCCCC
T ss_pred CCCCCceecCC----------------Cccccc-----cCChHHhCCc
Confidence 5999999753 223332 6799999864
No 3
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=3.9e-21 Score=158.69 Aligned_cols=95 Identities=21% Similarity=0.261 Sum_probs=85.6
Q ss_pred ccccccccccccccCCeEEEEEEeCCC---CCCceEEEEeecEEEEEEEcCCCceeeecc-ccccccccCcceEEEeCcE
Q 016973 173 KYRFQILMHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQP-RLFGKIIPAKCRYEVLSTK 248 (379)
Q Consensus 173 ~~~~~~~~~~W~Qt~~~V~i~i~~k~~---~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~-~L~~~I~p~~s~~~v~~~k 248 (379)
.|...+.+|+||||.+.|+|+|+++++ .++++.|+|++++|+|.+...+|..|.|++ +||++|+|++|+|+|.+++
T Consensus 15 ~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~k 94 (127)
T 1x5m_A 15 GYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDT 94 (127)
T ss_dssp CCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTE
T ss_pred ccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCE
Confidence 343445569999999999999999998 789999999999999999877778899999 5999999999999999999
Q ss_pred EEEEEeecCCC-CCCccccC
Q 016973 249 VEIRLAKAEPI-QWSSLEFS 267 (379)
Q Consensus 249 iei~L~K~~~~-~W~~L~~~ 267 (379)
|+|+|+|++.+ .|++|+..
T Consensus 95 Vei~L~K~~~~~~W~~L~~~ 114 (127)
T 1x5m_A 95 VLILCRKKVENTRWDYLTQV 114 (127)
T ss_dssp EEEEEECSSSSCCCSSSBHH
T ss_pred EEEEEEECCCCCCCCccccc
Confidence 99999999875 99999965
No 4
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.8e-23 Score=170.09 Aligned_cols=104 Identities=19% Similarity=0.285 Sum_probs=84.2
Q ss_pred ccccccccCCe-------EEEEEEeCCCCCCceEEEEeecEEEEEEEcCC------CceeeeccccccccccCcceEEEe
Q 016973 179 LMHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 245 (379)
Q Consensus 179 ~~~~W~Qt~~~-------V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~------~~~~~~~~~L~~~I~p~~s~~~v~ 245 (379)
+.|.||||.+. |+|+|+++++ .++.|+|++++|+|++...+ +..|.+.++||++|+|++|+|+|+
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 44889999987 9999999987 48999999999999876543 467999999999999999999999
Q ss_pred CcE-EEEEEeecC--CCCCCccccCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 016973 246 STK-VEIRLAKAE--PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 305 (379)
Q Consensus 246 ~~k-iei~L~K~~--~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~dWdk~~~~ 305 (379)
+++ |+|+|+|++ ...|++|++.. .++.|. ++|||||.+|
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~----------------~K~~~l-----k~D~dkw~dE 126 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEK----------------VKYPYI-----KTDFDKWVDA 126 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSC----------------CCCSSE-----EECTTTCCCS
T ss_pred CCEEEEEEEEECCCCCCCCCceecCC----------------CccCcc-----cCCchhcCCc
Confidence 999 999999998 47999999752 223332 6799999964
No 5
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.85 E-value=2.5e-21 Score=150.84 Aligned_cols=87 Identities=77% Similarity=1.243 Sum_probs=82.6
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeecCCCC
Q 016973 181 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEPIQ 260 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~~~ 260 (379)
|+||||.+.|+|+|+++|+.++++.|+|++++|+|++...++..|.++++||++|+|++|+|++.+++|+|+|+|++++.
T Consensus 5 ~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~~~~ 84 (92)
T 2xcm_C 5 HEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADIIT 84 (92)
T ss_dssp EEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSSSCC
T ss_pred ccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCCCCc
Confidence 99999999999999999999999999999999999988666778999999999999999999999999999999999889
Q ss_pred CCccccC
Q 016973 261 WSSLEFS 267 (379)
Q Consensus 261 W~~L~~~ 267 (379)
|++|++.
T Consensus 85 W~~L~~~ 91 (92)
T 2xcm_C 85 WASLEHG 91 (92)
T ss_dssp CSCSBTT
T ss_pred chhcccC
Confidence 9999863
No 6
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.84 E-value=2.4e-21 Score=160.49 Aligned_cols=88 Identities=27% Similarity=0.508 Sum_probs=82.7
Q ss_pred cccccc-CCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCCCc------------eeeeccccccccccCcceEEEeCc
Q 016973 181 HEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYEVLST 247 (379)
Q Consensus 181 ~~W~Qt-~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~------------~~~~~~~L~~~I~p~~s~~~v~~~ 247 (379)
|+|||| .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.|+++||++|+|++|+|+|.++
T Consensus 22 ~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~~ 101 (134)
T 1wh0_A 22 NDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFTAS 101 (134)
T ss_dssp EEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEECSS
T ss_pred eEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEEeCC
Confidence 999999 9999999999999999999999999999999876654 799999999999999999999999
Q ss_pred EEEEEEeecCCCCCCccccCC
Q 016973 248 KVEIRLAKAEPIQWSSLEFSK 268 (379)
Q Consensus 248 kiei~L~K~~~~~W~~L~~~~ 268 (379)
+|+|+|+|++..+|++|++..
T Consensus 102 kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 102 RIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp EEEEEEEESSSCCCSCSBCCC
T ss_pred EEEEEEEECCCCccccccccC
Confidence 999999999989999999764
No 7
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=7.5e-20 Score=150.46 Aligned_cols=112 Identities=27% Similarity=0.476 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
|+.+.++|+.+++.|+|++|+.+|+++|.++|.++.+++++|.||.++|++++|+.+|.+|+.++|.+..+|+++|.+|+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLV 92 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
.+|+|++|+.+|+++++++|++..+...++.|
T Consensus 93 ~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 99999999999999999999999998888776
No 8
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.81 E-value=3.3e-20 Score=150.38 Aligned_cols=93 Identities=35% Similarity=0.660 Sum_probs=86.1
Q ss_pred cccccccccccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEE
Q 016973 172 PKYRFQILMHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEI 251 (379)
Q Consensus 172 ~~~~~~~~~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei 251 (379)
+.+| |+|+||.+.|+|+|+++|+.++++.|+|++++|+|++...++..|.+.++||++|+|++|+|++.+++|+|
T Consensus 8 ~~~~-----~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i 82 (114)
T 1rl1_A 8 SKIK-----YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEI 82 (114)
T ss_dssp CCCC-----EEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEE
T ss_pred CCCC-----ccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEE
Confidence 4567 99999999999999999999999999999999999988767778999999999999999999999999999
Q ss_pred EEeecCCCCCCccccCCC
Q 016973 252 RLAKAEPIQWSSLEFSKG 269 (379)
Q Consensus 252 ~L~K~~~~~W~~L~~~~~ 269 (379)
+|.|++...|++|++.+.
T Consensus 83 ~L~K~~~~~W~~L~~~~~ 100 (114)
T 1rl1_A 83 KLKKPEAVRWEKLEGQGD 100 (114)
T ss_dssp EEECSSCCCCSSSBTTC-
T ss_pred EEEcCCCCcCccccccCC
Confidence 999999889999997653
No 9
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=3.5e-19 Score=151.85 Aligned_cols=120 Identities=20% Similarity=0.147 Sum_probs=111.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHccCHHHHHHHHHHHHHh---
Q 016973 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAE-----LFADRAQASIKLQNFTEAVADANRAIEL--- 65 (379)
Q Consensus 1 ~A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~-------~~~-----~~~~ra~~~~~lg~~~eAl~~~~~Al~l--- 65 (379)
+|..++..|+.++..|+|++|+..|++||+++|+ +.. +|.++|.|+.++|+|++|+.+|++||.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678999999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 66 ----EPSMSKAY----WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 66 ----~p~~~~a~----~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|++..+| |++|.+|..+|+|++|+.+|+++++++|++......+..+...+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999988777777776666554
No 10
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.78 E-value=3.6e-19 Score=147.61 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=74.0
Q ss_pred ccccccccCCeEEEEEEe-CCCCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcEEEEEEeecC
Q 016973 179 LMHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 257 (379)
Q Consensus 179 ~~~~W~Qt~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 257 (379)
+.|.|+||.+.|+|+|++ +|++.+++.|+|++++|+|.+. |.+ .+.++||++|+|++|+|+|.+++|+|+|.|..
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 348899999999999998 6889999999999999999874 445 68889999999999999999999999999996
Q ss_pred CCCCCccccC
Q 016973 258 PIQWSSLEFS 267 (379)
Q Consensus 258 ~~~W~~L~~~ 267 (379)
...|++|...
T Consensus 81 ~~~W~~L~~~ 90 (131)
T 2o30_A 81 NEWWDSLLVG 90 (131)
T ss_dssp CCCCSCSBC-
T ss_pred CCCCccccCC
Confidence 6789999965
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=9.7e-18 Score=136.26 Aligned_cols=116 Identities=31% Similarity=0.460 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
++.++..|..++..|+|++|+..|++++..+|.++.+++++|.||+++|++++|+.+|.+++.++|.+..+++++|.+++
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcC------CCChHHHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLA------PGDSRFTNLIKECEERI 117 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~------p~~~~~~~~l~~~~~~l 117 (379)
.+|++++|+.+|+++++++ |++..+...+..+...+
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999 99999999998887654
No 12
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.77 E-value=6.4e-18 Score=143.79 Aligned_cols=120 Identities=23% Similarity=0.312 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------------------SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~------------------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al 63 (379)
+..+...|+.++..|+|++|+..|+++|.+ +|.+..+|+++|.||+++|+|++|+.+|.+++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567899999999999999999999999999 77778999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHhhh
Q 016973 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEERIAEET 121 (379)
Q Consensus 64 ~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~-~~~~~l~~~~~~l~~~~ 121 (379)
.++|.++.+|+++|.+|+.+|+|++|+.+|++++.++|++. .+...+..+...+....
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 78889999998888763
No 13
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.76 E-value=3e-17 Score=139.88 Aligned_cols=121 Identities=26% Similarity=0.378 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|++++.++|.++.+++++|.||+.+|+|++|+.+|.+++.++|.+..+|+++|.+|+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHhhhc
Q 016973 82 KLEEYETAKVALEKGASLAPGDSR--FTNLIKECEERIAEETG 122 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~--~~~~l~~~~~~l~~~~~ 122 (379)
.+|+|++|+.+|+++++++|++.. +...+..+..++.+...
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~ 133 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANR 133 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988 67777788888877643
No 14
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.75 E-value=1.9e-19 Score=110.66 Aligned_cols=32 Identities=34% Similarity=0.688 Sum_probs=29.4
Q ss_pred chHHHHHHHHHHhcCCCHHHHHHhhhhhhccC
Q 016973 317 GDAALNKFFQEIYADADEDTRRAMKKSFVESN 348 (379)
Q Consensus 317 ~~~~l~~~f~~iY~~~d~d~kram~Ks~~eS~ 348 (379)
++++||+|||+||++|||||||||||||+|||
T Consensus 4 p~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 4 SSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp -CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 34579999999999999999999999999997
No 15
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.74 E-value=5.1e-17 Score=138.12 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|++++.++|.++.+|+++|.||..+|+|++|+.+|.+|+.++|+++.+|+++|.+|.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCCh
Q 016973 82 KLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
.+|++++|+.+|++++++.|+.+
T Consensus 116 ~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 116 RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999865
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.74 E-value=4.9e-17 Score=133.53 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~-------~~a~~ 74 (379)
|..+.+.|+.++..|+|++|+.+|++||+++|.++.+|.++|.||+.+|+|++|+.+|.+++.++|.+ +.+|+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 55778999999999999999999999999999999999999999999999999999999999998754 46899
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
++|.++..+|+|++|+.+|++++.+.|+ +.....+..+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999999999999999999999999885 4444444443
No 17
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.74 E-value=1.3e-17 Score=137.00 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=81.0
Q ss_pred cccccccCCeEEEEEEeC-CC-CCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcE-EEEEEeec
Q 016973 180 MHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAKA 256 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k-~~-~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K~ 256 (379)
.|.|+||.+.|+|+|.++ ++ +.+++.|+|++++|+|.+...+|..+.+.++||++|+|++|+|+|.+++ |+|+|+|+
T Consensus 21 ~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 21 NYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKV 100 (124)
T ss_dssp SCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECBS
T ss_pred cEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEEC
Confidence 488999999999999986 66 7899999999999999987655666778999999999999999999887 99999999
Q ss_pred CCCCCCccccCCC
Q 016973 257 EPIQWSSLEFSKG 269 (379)
Q Consensus 257 ~~~~W~~L~~~~~ 269 (379)
+...|++|...+.
T Consensus 101 ~~~~W~~L~~~~~ 113 (124)
T 1wgv_A 101 GEYWWNAILEGEE 113 (124)
T ss_dssp SSCCCSCSBTTSC
T ss_pred CCCCCcCcccCCC
Confidence 8889999997643
No 18
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.72 E-value=1.5e-16 Score=134.29 Aligned_cols=118 Identities=11% Similarity=0.135 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|+|++|+..|.+++..+|.++.+++++|.||..+|++++|+.+|.+++.++|+++.+++.+|.+|..
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+.+|+++++++|+++....+..++...+...
T Consensus 102 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 102 XGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999998888888888887775
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.72 E-value=1.6e-16 Score=132.36 Aligned_cols=118 Identities=10% Similarity=0.134 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|+|++|+.+|.+++..+|.++.+++.+|.||..+|+|++|+.+|.+++.++|.++.+++.+|.+|..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+.+|++++.++|+++.......++...+...
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888888777765
No 20
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.70 E-value=1.3e-16 Score=134.75 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.++..|.+++..|+|++|+.+|+++|+++|+++.+|+++|.||..+|++++|+.+|.+++.++|+++.+++.+|.+|+.+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHH-HHHHHhcCCCChHHHHHHHHHHH
Q 016973 84 EEYETAKVA-LEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 84 g~y~~A~~~-~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
|++++|... ++++++++|+++.+...+.++..
T Consensus 113 ~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 113 DVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp CSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999887765 59999999999998777766644
No 21
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.67 E-value=1.6e-15 Score=124.09 Aligned_cols=119 Identities=24% Similarity=0.367 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|.+++..+|.++.+++++|.|++.+|++++|+.++.+++.++|.++.+++.+|.+|+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCC-----ChHHHHHHHHHHHHHHhh
Q 016973 82 KLEEYETAKVALEKGASLAPG-----DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~-----~~~~~~~l~~~~~~l~~~ 120 (379)
.+|++++|+.+|++++.++|+ +..+...+..+.......
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 777888888887776554
No 22
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.65 E-value=3.9e-15 Score=130.62 Aligned_cols=121 Identities=22% Similarity=0.301 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----------------ELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~----------------~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
+..++..|..++..|+|++|+.+|.+++.+.|.++ .+++++|.||+.+|+|++|+.+|.+++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45788999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhhhc
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEETG 122 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~~~ 122 (379)
+|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++....
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888743
No 23
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.65 E-value=2.6e-16 Score=134.05 Aligned_cols=84 Identities=24% Similarity=0.390 Sum_probs=75.2
Q ss_pred cccccccCCeEEEEEEeC-CCCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCcE-EEEEEeecC
Q 016973 180 MHEFYQKPEEVVVTVFAK-GIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAKAE 257 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k-~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K~~ 257 (379)
.|.|+||.+.|+|+|.++ +++.++|.|+|++++|+|.++ |.. .+.++||++|+|++|+|+|.+++ |+|+|.|++
T Consensus 15 ~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K~~ 90 (157)
T 2rh0_A 15 WGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTKTK 90 (157)
T ss_dssp SEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEBSS
T ss_pred cEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEEcC
Confidence 388999999999999985 788899999999999999885 444 47889999999999999999987 999999998
Q ss_pred C---CCCCccccC
Q 016973 258 P---IQWSSLEFS 267 (379)
Q Consensus 258 ~---~~W~~L~~~ 267 (379)
. ..|++|...
T Consensus 91 ~~~~~~W~~L~k~ 103 (157)
T 2rh0_A 91 RDAANCWTSLLES 103 (157)
T ss_dssp CSTTCCCSEEETT
T ss_pred CCcCCcChhhhcC
Confidence 5 799999964
No 24
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.65 E-value=1.9e-15 Score=122.99 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.++..|..++..|++++|+..|.+++..+|+++.+++.+|.++..+|++++|+..|.+|+.++|++..+++.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChH
Q 016973 84 EEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~ 105 (379)
|++++|+..|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999998753
No 25
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.65 E-value=8.5e-15 Score=115.30 Aligned_cols=114 Identities=26% Similarity=0.440 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|.+++..+|.++.+++.+|.++..+|++++|+..+.+++.++|.++.+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
.+|++++|+..|+++++++|++..+...+..+..
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999988887777653
No 26
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.64 E-value=1.1e-15 Score=126.61 Aligned_cols=86 Identities=19% Similarity=0.256 Sum_probs=77.1
Q ss_pred cccccccCCeEEEEEEeC-C--CCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCc-EEEEEEee
Q 016973 180 MHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLAK 255 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~-kiei~L~K 255 (379)
.|.|+||.+.|+|+|.++ + ++.+++.|+|++++|+|.+. |..+.+.++||++|+|+.|+|+|.++ .|+|+|+|
T Consensus 9 ~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K 85 (131)
T 1wfi_A 9 NYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEK 85 (131)
T ss_dssp SSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEEB
T ss_pred cEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEEE
Confidence 388999999999999987 5 78899999999999999975 44577889999999999999999997 59999999
Q ss_pred cCC-CCCCccccCC
Q 016973 256 AEP-IQWSSLEFSK 268 (379)
Q Consensus 256 ~~~-~~W~~L~~~~ 268 (379)
++. ..|++|...+
T Consensus 86 ~~~~~~W~~L~~~~ 99 (131)
T 1wfi_A 86 INKMEWWNRLVTSD 99 (131)
T ss_dssp SSSCCCCSCSBSSC
T ss_pred CCCCCCChhhhcCC
Confidence 987 5999999754
No 27
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.64 E-value=3.7e-15 Score=132.45 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHh
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFAD----------------RAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~----------------ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
++.++.+|..++..|+|++|+.+|++++..+|+++.+++. +|.+|..+|++++|+..|.+++.+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
+|++..+++.+|.+|+.+|++++|+.+|+++++++|++..+...++.+....+
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999888887765443
No 28
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.64 E-value=6.2e-15 Score=141.17 Aligned_cols=119 Identities=21% Similarity=0.360 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---------------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~ 66 (379)
+..++.+|+.++..|+|++|+.+|+++|.++|.+ ..+++++|.||+++|+|++|+.+|.+|+.++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4578899999999999999999999999999999 6999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..+...++.+...+++.
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888887776664
No 29
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.63 E-value=4.6e-15 Score=119.81 Aligned_cols=116 Identities=28% Similarity=0.423 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
...++..|..++..|+|++|+.+|++++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.+..+++.+|.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
.+|++++|+.+|++++.++|++..+...+..+...+
T Consensus 96 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 999999999999999999999998888888877654
No 30
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.63 E-value=6.7e-15 Score=119.06 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=106.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHH
Q 016973 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYW 74 (379)
Q Consensus 1 ~A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~---~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~---~~a~~ 74 (379)
+++.++..|..++..|+|++|+..|.+++..+|++. .+++.+|.|++.+|++++|+..|.+++.++|++ +.+++
T Consensus 1 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 456789999999999999999999999999999988 799999999999999999999999999999999 89999
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
.+|.+++.+|++++|+..|++++...|++......+..+...
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999998776666655543
No 31
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.63 E-value=4.4e-15 Score=148.21 Aligned_cols=119 Identities=23% Similarity=0.331 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---------------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~ 66 (379)
+..++.+|+.++..|+|++|+.+|++||.++|.+ ..+|+++|.||+++|+|++|+.+|.+|+.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4578899999999999999999999999999998 7999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
|.+..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...+++.
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888877764
No 32
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.62 E-value=2.3e-14 Score=114.77 Aligned_cols=118 Identities=34% Similarity=0.476 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+..|.+++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.+..+++.+|.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.+|++++|+.+|++++.++|++......+..+...+++
T Consensus 92 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988888888777654
No 33
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.61 E-value=1.9e-15 Score=123.32 Aligned_cols=86 Identities=19% Similarity=0.246 Sum_probs=76.8
Q ss_pred ccccccCCeEEEEEEeC-C--CCCCceEEEEeecEEEEEEEcCCCceeeeccccccccccCcceEEEeCc-EEEEEEeec
Q 016973 181 HEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLAKA 256 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~s~~~v~~~-kiei~L~K~ 256 (379)
|.|+||.+.|+|+|.++ + +..++|.|+|++++|+|.++ |..+.+.++||++|+|++|+|+|.+. +|+|+|.|.
T Consensus 19 y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~K~ 95 (121)
T 3qor_A 19 YRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKI 95 (121)
T ss_dssp CEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEEBS
T ss_pred EEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEEEC
Confidence 88999999999999886 4 78899999999999999875 44678899999999999999999985 899999999
Q ss_pred CC-CCCCccccCCC
Q 016973 257 EP-IQWSSLEFSKG 269 (379)
Q Consensus 257 ~~-~~W~~L~~~~~ 269 (379)
+. ..|++|...+.
T Consensus 96 ~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 96 NKMEWWSRLVSSDP 109 (121)
T ss_dssp SSSCCCSCSBTTSC
T ss_pred CCCCCChhhhcCCC
Confidence 87 69999987643
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.5e-14 Score=119.08 Aligned_cols=113 Identities=27% Similarity=0.424 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~ 78 (379)
+..++..|..++..|+|++|+.+|++++..+|++ ..+++++|.+|+.+|++++|+..+.+++.++|.+..+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 4678999999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 79 ~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
+|+.+|++++|+.+|++++.++|++..+...+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999998887777764
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.60 E-value=5.5e-14 Score=118.05 Aligned_cols=113 Identities=32% Similarity=0.511 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+..|.+++..+|.+..+++++|.++..+|++++|+..+.+++.++|.++.+++.+|.+++
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
.+|++++|+.+|++++.++|++......+..+.
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999998776666653
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.59 E-value=1.1e-14 Score=153.01 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
++.+.+.|+++...|+|++|+.+|++||+++|+++.+++++|.+|.++|++++|+..|++|++++|+++.+|+++|.+|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.+|++++|+.+|+++++++|++..+...++.+...+++
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~ 126 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGN 126 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 66666666666666666666666666555555544433
No 37
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.59 E-value=3.7e-14 Score=113.73 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~-------~~a~~ 74 (379)
+..++..|..++..|+|++|+.+|.+++..+|.+..+++++|.++..+|++++|+..+.+++.+.|.+ ..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999998877 99999
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++|.+++.+|++++|+.+|++++.+.| +......+..+...++..
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 688888888888877664
No 38
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.59 E-value=1.4e-14 Score=140.88 Aligned_cols=119 Identities=24% Similarity=0.442 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE----------------ISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~----------------~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
+..++..|+.++..|+|++|+.+|+++|. .+|.+..+|+++|.||+++|+|++|+.+|.+|+.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45788999999999999999999999999 77888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|.++.+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++..
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888776
No 39
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.58 E-value=2.2e-14 Score=128.24 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|++++|+..|++++..+|.++.+++++|.++..+|++++|+..|.+++.++|+++.+++.+|.++..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred c-----------cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 L-----------EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 l-----------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+ |++++|+..|+++++++|++..+...++.+...+++
T Consensus 86 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~ 133 (217)
T 2pl2_A 86 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE 133 (217)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC
Confidence 7 777777777777777777777766666665554443
No 40
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.57 E-value=1.7e-13 Score=108.68 Aligned_cols=115 Identities=22% Similarity=0.387 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|++++|+.+|.+++..+|.+..+++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
.+|++++|+..|++++.++|++..+...+..+...
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 99999999999999999999999988888777654
No 41
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.57 E-value=9.8e-14 Score=123.87 Aligned_cols=112 Identities=16% Similarity=0.300 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p-~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+..++..|..++..|+|++|+..|++++..+| .+..+++++|.|+..+|++++|+.+|.+++.++|.+..+++.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 45789999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
..+|++++|+..|+++++++|++..+...+..+
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 119 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIY 119 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 999999999999999999999999554333333
No 42
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.57 E-value=2.6e-15 Score=126.70 Aligned_cols=114 Identities=11% Similarity=-0.095 Sum_probs=104.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCH
Q 016973 7 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEY 86 (379)
Q Consensus 7 ~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y 86 (379)
..|..+...|++++|+..|.+++..+|.++..++.+|.+|+++|+|++|+.+|.+++.++|+++.+|+.+|.+|..+|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 35788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 87 ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 87 ~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++|+.+|+++++++|++..+...++.+...++..
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 9999999999999999999998888887766553
No 43
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.56 E-value=3.3e-14 Score=138.76 Aligned_cols=119 Identities=13% Similarity=0.017 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~-~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+..+...|.++...|++++|+.+|+++|.++|++..+|++||.++..+|+ +++|+.+|.+|+.++|.+..+|+++|.+|
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~ 176 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV 176 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
..+|+|++|+.+|+++++++|++..++..++.+...++..
T Consensus 177 ~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 216 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCCh
Confidence 9999999999999999999999999999999888877764
No 44
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.55 E-value=1.2e-13 Score=118.84 Aligned_cols=115 Identities=15% Similarity=0.184 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..+++.|.+++..|+|++|+..|+++|+++|+++.+++.+|.+|..+|++++|+..+.+++...|....+++.+|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999988888888887777765555555555555
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
..++++.|...+.+++.++|++..+...++.+...
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~ 119 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS 119 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 55555555555555555555555544444444433
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.55 E-value=5.4e-14 Score=147.87 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..+.+.|.+++..|++++|+..|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+|.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.+|++++|+.+|+++++++|++..+...++.+...+++
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 99999999999999999999999988888877665444
No 46
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.55 E-value=1.2e-13 Score=123.39 Aligned_cols=118 Identities=13% Similarity=0.107 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCCH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-----------QNFTEAVADANRAIELEPSMS 70 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l-----------g~~~eAl~~~~~Al~l~p~~~ 70 (379)
+..++..|.+++..|++++|+..|++++.++|+++.+++++|.++..+ |++++|+..|.+++.++|++.
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 456788899999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
.+++.+|.+|..+|++++|+.+|+++++++ ++..+...++.+...+++.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCH
Confidence 999999999999999999999999999999 8888888887777666654
No 47
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.54 E-value=4.3e-14 Score=137.95 Aligned_cols=115 Identities=7% Similarity=-0.031 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~-y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+..++.+|.++...|+ |++|+.+|+++|.++|+++.+|++||.++..+|++++|+.+|.+|+.++|.+..+|+.+|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 4578999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
..+|++++|+.+|+++++++|++..++..++.+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888666
No 48
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.54 E-value=1.2e-14 Score=139.39 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----------------ELFADRAQASIKLQNFTEAVADANRAIE 64 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~-----------------~~~~~ra~~~~~lg~~~eAl~~~~~Al~ 64 (379)
+..++.+|+.++..|+|++|+.+|.++|.+.|.+. .+|+++|.||+++|+|++|+.+|.+++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999877 3899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 65 LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 65 l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
++|.+..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...+..
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~ 313 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKA 313 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888887555444
No 49
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.53 E-value=3.5e-14 Score=120.70 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=97.6
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNF----------TEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 12 ~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~----------~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
.-+.+.|++|+..|.++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++..+|+++|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999876 59999999999999999999999999999
Q ss_pred hcc-----------CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 82 KLE-----------EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 82 ~lg-----------~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
.+| +|++|+.+|++|++++|++..+...+..+.....
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHh
Confidence 885 8999999999999999999988888777665443
No 50
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.52 E-value=9.5e-14 Score=108.29 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATAC 80 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~--~~~a~~~la~~~ 80 (379)
..++..|..++..|++++|+.+|.+++..+|.+..+++++|.+++.+|++++|+..+.+++.++|. +..+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred Hhc-cCHHHHHHHHHHHHhcCCCCh
Q 016973 81 MKL-EEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 81 ~~l-g~y~~A~~~~~~a~~l~p~~~ 104 (379)
..+ |++++|+.+|++++...|.+.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999 999999999999999999764
No 51
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.51 E-value=1.6e-13 Score=127.94 Aligned_cols=102 Identities=28% Similarity=0.416 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|+.++..|+|++|+..|++++..+|.++.+++++|.+|..+|++++|+.++.+++.++|.+..+++++|.+|+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCC
Q 016973 82 KLEEYETAKVALEKGASLAPGD 103 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~ 103 (379)
.+|+|++|+..|+++++++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999876
No 52
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.51 E-value=3.1e-13 Score=120.59 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-------HHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-------KAYWR 75 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~-------~a~~~ 75 (379)
..++..|.+++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|.+. .+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 122 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLK 122 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 35677999999999999999999999999999999999999999999999999999999999999998 77999
Q ss_pred HHHHHHhccCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHhh
Q 016973 76 KATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 76 la~~~~~lg~y~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~l~~~ 120 (379)
+|.+++.+|++++|+.+|+++++++|+ +......++.+...++..
T Consensus 123 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 123 EGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 888888888887766654
No 53
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.50 E-value=5.7e-13 Score=114.18 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHhCCCCHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-SIKLQNF--TEAVADANRAIELEPSMSKAYWRKAT 78 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~-~~~lg~~--~eAl~~~~~Al~l~p~~~~a~~~la~ 78 (379)
+..++..|.+++..|+|++|+.+|.+++.++|.++.+++.+|.+ ++..|++ ++|+..+.+++.++|.+..+++.+|.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999 8899999 99999999999999999999999999
Q ss_pred HHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 79 ~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
+|+.+|++++|+.+|++++.++|++......+..+...
T Consensus 124 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~~ 161 (177)
T 2e2e_A 124 DAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINMA 161 (177)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Confidence 99999999999999999999999987766655555443
No 54
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=7.1e-13 Score=117.54 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=94.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-----
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----- 82 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~----- 82 (379)
.|.+++..|+|++|+..|+++|.++|+++.+++++|.+|..+|++++|+.+|++++.++|+++.+++.+|.+|+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999888888877654
Q ss_pred ------------------------------ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 83 ------------------------------LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 83 ------------------------------lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
+|+|++|+.+|+++++++|+.. ....+.++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i~ 200 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHHH
Confidence 3468899999999999999743 444455543
No 55
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.50 E-value=3.4e-14 Score=114.12 Aligned_cols=101 Identities=17% Similarity=0.092 Sum_probs=90.2
Q ss_pred HcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHH
Q 016973 14 IDDYFELAYDLYSQAIEI---SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (379)
Q Consensus 14 ~~g~y~~Al~~y~~al~~---~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~ 90 (379)
..|++++|+.+|+++|.. +|.+..+++++|.+|+.+|+|++|+..|.+++.++|+++.+++.+|.+|+.+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHH
Q 016973 91 VALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
..|++++.+.|+++.+......+.
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999998766554443
No 56
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.47 E-value=1.6e-12 Score=111.73 Aligned_cols=119 Identities=22% Similarity=0.165 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..+...|.+++..|++++|+..+.+++...|.+..++..+|.++...++++.|+..+.+++.++|.+..+++.+|.+|.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
.+|+|++|+.+|+++++++|++..+...++.+...+++.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCH
Confidence 888888888888888888888888888887777766654
No 57
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.45 E-value=3.3e-12 Score=112.14 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH------------
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS------------ 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~------------ 70 (379)
..++..|.+++..|+|++|+..|.+++..+|.+..+++++|.+|..+|++++|+.+|.+++.+.|.+.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccC
Confidence 45677888888888888888888888888888888888888888888888888888888888777655
Q ss_pred ----HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChH
Q 016973 71 ----KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 71 ----~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.+++.+|.+|+.+|++++|+.+|+++++++|++..
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 78888888888888888888888888888886543
No 58
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.44 E-value=2e-13 Score=137.01 Aligned_cols=115 Identities=30% Similarity=0.501 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++.+|..++..|+|++|+.+|+++++++|.+..+++++|.+|.++|+|++|+.+|.+|++++|.++.+++++|.+|+.
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 86 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 86 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 44566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
+|+|++|+.+|+++++++|++..+...+..+...+
T Consensus 87 ~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 87 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888884443
No 59
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.44 E-value=3e-12 Score=102.35 Aligned_cols=116 Identities=21% Similarity=0.317 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|++++|+..|.+++..+|.+...+..+|.++...|++++|+..+.+++.+.|....+++.+|.++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
+|++++|+..|.+++.+.|.+......+..+...++
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 117 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 117 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHc
Confidence 999999999999999999998887777766655443
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.7e-12 Score=116.31 Aligned_cols=111 Identities=32% Similarity=0.470 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|+|++|+..|++++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.++.+++.+|.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcC------CCChHHHHHHHHH
Q 016973 83 LEEYETAKVALEKGASLA------PGDSRFTNLIKEC 113 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~------p~~~~~~~~l~~~ 113 (379)
+|++++|+.+|+++++++ |++..+...+.+|
T Consensus 220 ~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 220 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999 8888877777654
No 61
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.43 E-value=4e-12 Score=115.41 Aligned_cols=112 Identities=21% Similarity=0.101 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|++++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|+
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~ 122 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALY 122 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
.+|++++|+.+|++++.++|++.....++..+
T Consensus 123 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 123 YGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 99999999999999999999998665555443
No 62
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.43 E-value=1.5e-12 Score=118.88 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWR 75 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~---~~~a~~~ 75 (379)
+..++..|..++..|+|++|+..|.+++..+|.+ ..+++.+|.||+++|+|++|+..|.+++.+.|. ...+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999884 4789999
Q ss_pred HHHHHHh--------ccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 76 KATACMK--------LEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 76 la~~~~~--------lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
+|.+++. +|++++|+..|++++.++|++....
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999 9999999999999999999987665
No 63
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.43 E-value=7.3e-14 Score=118.50 Aligned_cols=101 Identities=11% Similarity=-0.058 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 20 LAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 20 ~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
.+-..|.+++.++|+++.+++.+|.+++++|+|++|+..|.+++.++|.++.+|+.+|.+|+.+|+|++|+.+|++++++
T Consensus 20 ~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 20 NSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34455888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHhh
Q 016973 100 APGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 100 ~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|+++.+...++.|...+++.
T Consensus 100 ~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 100 GKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp SSSCCHHHHHHHHHHHHTTCH
T ss_pred CCCCcHHHHHHHHHHHHcCCH
Confidence 999999999999998887775
No 64
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.4e-13 Score=107.91 Aligned_cols=94 Identities=19% Similarity=0.291 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR 75 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------~~a~~~ 75 (379)
+..++..|..++..|+|++|+..|++++..+|.++.+++++|.||+.+|++++|+.+|.+++.++|.+ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred HHHHHHhccCHHHHHHHHHH
Q 016973 76 KATACMKLEEYETAKVALEK 95 (379)
Q Consensus 76 la~~~~~lg~y~~A~~~~~~ 95 (379)
+|.++..+|+++.|+..|++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999988887766544
No 65
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=2.9e-12 Score=112.54 Aligned_cols=115 Identities=19% Similarity=0.180 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|+|++|+..|.+++ ++ ++.+++++|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 467899999999999999999999996 33 689999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCCh----------------HHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDS----------------RFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~----------------~~~~~l~~~~~~l~~~ 120 (379)
+|+|++|+.+|++++++.|.+. .+...++.+...+++.
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 137 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW 137 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH
Confidence 9999999999999999999877 6777777766655443
No 66
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.41 E-value=8.7e-12 Score=105.57 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.++...|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 122 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN 122 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH
Confidence 45677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+|++++|+..|++++...|.+......++.+...+++
T Consensus 123 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 123 LGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCC
Confidence 8888888888888888888888777777776655444
No 67
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.38 E-value=1.5e-11 Score=115.36 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=109.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE----LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~----~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
.+..|..++..|++++|+..|.+++...|.+.. ++..+|.++.++|++++|+..+.+++.++|.++.+++.+|.+|
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 456699999999999999999999999999874 4677999999999999999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
..+|++++|+.+|+++++++|++..+...+..+...+++.
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888765
No 68
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.38 E-value=3.6e-12 Score=127.60 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFID---------DYFELAYDLYSQAIEISPNSAELFADRAQASIKL--------QNFTEAVADANRAIEL 65 (379)
Q Consensus 3 ~~l~~~g~~~~~~---------g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l--------g~~~eAl~~~~~Al~l 65 (379)
..+...|.+++.. |+|++|+.+|.+++.++|++..+++++|.+|..+ |++++|+..|.+|+.+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 4677889999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred CC---CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 66 EP---SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 66 ~p---~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+| .++.+|+.+|.+|+.+|+|++|+.+|+++++++|++..+...++.+...+++.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999888888888887776
No 69
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.38 E-value=8.3e-12 Score=99.32 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Q 016973 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
+.|+..|.+++..+|.++.+++.+|.+|+.+|++++|+..|.+++.++|.+..+++.+|.+|..+|++++|+.+|++++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC--ChHHHHHHHHHHHHHHhh
Q 016973 99 LAPG--DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 99 l~p~--~~~~~~~l~~~~~~l~~~ 120 (379)
++|. +......+..+...++..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhccc
Confidence 9884 444555555555555554
No 70
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.38 E-value=9.2e-12 Score=111.49 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH---HHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---AYWR 75 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~---a~~~ 75 (379)
+..++..|..++..|+|++|+..|++++...|.+ ..+++.+|.||+++|++++|+..|.+++.++|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 4678999999999999999999999999999887 478999999999999999999999999999998764 8999
Q ss_pred HHHHHHh------------------ccCHHHHHHHHHHHHhcCCCChHHHH
Q 016973 76 KATACMK------------------LEEYETAKVALEKGASLAPGDSRFTN 108 (379)
Q Consensus 76 la~~~~~------------------lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (379)
+|.+++. +|++++|+..|+++++.+|++..+..
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 9999986 67999999999999999999886543
No 71
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.37 E-value=7.4e-12 Score=127.56 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+..|+++++++|++..+++++|.+|..+|++++|+..|++++.++|.+..+++.+|.+|.
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
.+|++++|+.+|+++++++|++..+...++.+...+
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998888888777766
No 72
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.37 E-value=8.5e-12 Score=118.32 Aligned_cols=119 Identities=15% Similarity=0.195 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..+...|..++..|++++|+.+|.+++..+|.++.+++++|.++..+|++++|+..|.+++.++|.+..+++.+|.+|.
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCC-----------hHHHHHHHHHHHHHHhh
Q 016973 82 KLEEYETAKVALEKGASLAPGD-----------SRFTNLIKECEERIAEE 120 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~-----------~~~~~~l~~~~~~l~~~ 120 (379)
.+|++++|+..|++++.++|++ ...+..+..+...+++.
T Consensus 297 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 297 NLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred HCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 9999999999999999999988 67777888887777765
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.37 E-value=2.1e-11 Score=108.48 Aligned_cols=117 Identities=16% Similarity=0.155 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.+++.
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 35566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+|++++|+..|++++.++|++..+...++.+...++.
T Consensus 138 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGM 174 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred hccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCC
Confidence 7777777777777777777777766666665554443
No 74
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.37 E-value=7.1e-12 Score=106.12 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|++++|+..|.+++..+|.+..+++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV 87 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
..|++++|+..|++++.++|.+......++.+...++..
T Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF 126 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH
Confidence 999999999999999999999998887777776655443
No 75
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=8.2e-12 Score=111.85 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHccCHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE--------------------------ISPNSAELFADRAQASIKLQNFTEA 55 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~--------------------------~~p~~~~~~~~ra~~~~~lg~~~eA 55 (379)
+..+...|..++..|++++|+..|.+++. .+|.+..++..+|.+++.+|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 45678899999999999999999999999 6667788999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 56 l~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+..+.+++.++|.++.+++.+|.++..+|++++|+.+|+++++++|++......++.+...+++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999888888887766554
No 76
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.36 E-value=4.4e-12 Score=126.95 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y-~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+..++.+|..++..|+| ++|+.+|++++.++|.+..+++.+|.+|..+|++++|+.+|.+|+.++|+ ..+++.+|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 46788999999999999 99999999999999999999999999999999999999999999999998 79999999999
Q ss_pred Hhc---------cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 81 MKL---------EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 81 ~~l---------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
..+ |++++|+.+|+++++++|++..++..++.+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999888888887666
No 77
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.36 E-value=1.4e-11 Score=115.43 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
++.++..|..++..|+|++|+.+|.+++..+|.++.+++.+|.+++.+|++++|+..+.+++.++|.+..+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCC---CChHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAP---GDSRFTNLIK 111 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p---~~~~~~~~l~ 111 (379)
.+|++++|+..|++++.++| ++......+.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999 7777666553
No 78
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=1.6e-11 Score=109.30 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+..|.+++..+|.+..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.+++.
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN 171 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+..|++++.++|++......++.+...+++.
T Consensus 172 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 172 EGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCH
Confidence 99999999999999999999988888888777665543
No 79
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.36 E-value=2.5e-12 Score=105.15 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=86.8
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHH
Q 016973 27 QAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 27 ~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
++..++|+.+..+.++|.+|++.|+|++|+..|.+|+.++|.++.+|+.+|.+|+.+|++++|+.+|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 45567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 016973 107 TNLIKECEERIAEE 120 (379)
Q Consensus 107 ~~~l~~~~~~l~~~ 120 (379)
...++.+...+++.
T Consensus 84 ~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 84 YIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHCCCH
Confidence 99999888877665
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.36 E-value=1.7e-12 Score=135.84 Aligned_cols=117 Identities=9% Similarity=-0.083 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++.+|..++..|+|++|+..|+++++.+|++..+++++|.+|+.+|++++|+.+|++|++++|+++.+++.+|.+|+.
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|+|++ +.+|+++++++|++..+...++.+...+++.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDR 550 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCH
Confidence 999999 9999999999999999888888888777665
No 81
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=7.7e-12 Score=119.09 Aligned_cols=118 Identities=16% Similarity=0.229 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|.+++..+|.++.++.++|.+|..+|++++|+..|.+++.++|.++.+++.+|.+|..
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 45677788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCHHHHHHHHHHHHhcCCCC------------hHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGD------------SRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~------------~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+.+|+++++++|++ ..++..+..+...++..
T Consensus 294 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 343 (365)
T 4eqf_A 294 LGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQP 343 (365)
T ss_dssp HTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcH
Confidence 888888888888888887763 34555556555555443
No 82
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.35 E-value=1.1e-11 Score=115.52 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH------------------------
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------ 58 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~------------------------ 58 (379)
+.++..|..++..|++++|+..|++++..+|+++.+++.+|.+|..+|++++|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX 197 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh
Confidence 46788999999999999999999999999999999999999999999999887544
Q ss_pred ----------HHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC--hHHHHHHHHHHHHHHhh
Q 016973 59 ----------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAEE 120 (379)
Q Consensus 59 ----------~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~l~~~ 120 (379)
+.+++.++|++..+++.+|.+|..+|++++|+..|+++++++|++ ..+...+..+...++..
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 555577799999999999999999999999999999999999998 66777777777766653
No 83
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=1.3e-11 Score=112.49 Aligned_cols=116 Identities=18% Similarity=0.086 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHhCCCCH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIK--------LQNFTEAVADANRAIELEPSMS 70 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---~~~~~~ra~~~~~--------lg~~~eAl~~~~~Al~l~p~~~ 70 (379)
+..++..|.+++..|+|++|+..|++++..+|.+ ..+++.+|.|++. +|++++|+..|.+++.+.|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 4578999999999999999999999999998855 6789999999999 9999999999999999999876
Q ss_pred HHH-----------------HHHHHHHHhccCHHHHHHHHHHHHhcCCCC---hHHHHHHHHHHHHH
Q 016973 71 KAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLIKECEERI 117 (379)
Q Consensus 71 ~a~-----------------~~la~~~~~lg~y~~A~~~~~~a~~l~p~~---~~~~~~l~~~~~~l 117 (379)
.+. +.+|.+|+.+|+|++|+..|++++...|++ ..+...++.+...+
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 655 899999999999999999999999999985 44666777776655
No 84
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.34 E-value=1e-11 Score=112.74 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|.+++..|++++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|..++.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 45677778888888888888888888888887777788888888888888888888888888788788888888844445
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.+++++|+..|+++++++|++......++.+...++.
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 5588888888888888888777776667666665543
No 85
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.34 E-value=2.8e-11 Score=105.99 Aligned_cols=117 Identities=12% Similarity=0.040 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|++++|+.+|.+++..+|.+..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 88 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG 88 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 45677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred c-cCHHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHHHh
Q 016973 83 L-EEYETAKVALEKGAS--LAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 l-g~y~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+ |++++|+..|++++. ..|.+......++.+...+++
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 128 (225)
T 2vq2_A 89 RLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQ 128 (225)
T ss_dssp TTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTC
T ss_pred hcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCC
Confidence 8 888888888888888 455555555566665554443
No 86
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.33 E-value=3.3e-11 Score=96.14 Aligned_cols=101 Identities=24% Similarity=0.396 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|.+++...|.+..+++.+|.++...|++++|+..+.+++.+.|....+++.+|.++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCC
Q 016973 83 LEEYETAKVALEKGASLAPGD 103 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~ 103 (379)
+|++++|+..|.+++.++|++
T Consensus 116 ~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 116 QGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHHHSTTC
T ss_pred HccHHHHHHHHHHHHccCCCC
Confidence 999999999999999998863
No 87
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.33 E-value=1.9e-12 Score=108.85 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcC
Q 016973 21 AYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (379)
Q Consensus 21 Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~ 100 (379)
+-..|.+++.++|.+..+++.+|.+++..|+|++|+..|.+++.++|.++.+|+.+|.+|..+|+|++|+.+|++++.++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhh
Q 016973 101 PGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 101 p~~~~~~~~l~~~~~~l~~~ 120 (379)
|++..+...++.+...+++.
T Consensus 86 p~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCH
T ss_pred CCCchHHHHHHHHHHHcCCH
Confidence 99999988888887776664
No 88
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.33 E-value=6e-12 Score=114.34 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C-CHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--S-MSKAYWRKAT 78 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p--~-~~~a~~~la~ 78 (379)
.+.++..|..++..|+|++|+..|++++..+|.+..+++.+|.+|+.+|++++|+..+.+++...+ . ...+++.+|.
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~ 82 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGK 82 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999432 2 2566999999
Q ss_pred HHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 79 ~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++..+|++++|+.+|+++++++|++..+...++.+...+++.
T Consensus 83 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 124 (272)
T 3u4t_A 83 ILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNF 124 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCH
Confidence 999999999999999999999999999988888888777665
No 89
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.32 E-value=3.5e-12 Score=133.40 Aligned_cols=112 Identities=10% Similarity=-0.064 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++.+|.+++..|+|++|+..|+++++++|+++.+++++|.+|.++|++++ +.+|++|++++|.+..+++++|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
.+|++++|+.+|+++++++|++..+...++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999988877776664
No 90
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=1.2e-11 Score=117.66 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=102.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~--~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
+...|..+...|++++|+.+|.+++..+|. ++.+++++|.+|..+|++++|+..|.+++.++|.++.+++.+|.+|..
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 259 (365)
T 4eqf_A 180 TRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN 259 (365)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 345588999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+.+|+++++++|++..+...++.+...+++.
T Consensus 260 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 260 GDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAY 297 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCH
Confidence 99999999999999999999999888888887776654
No 91
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.32 E-value=4.2e-11 Score=104.89 Aligned_cols=118 Identities=16% Similarity=0.087 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--hCCCCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-QNFTEAVADANRAIE--LEPSMSKAYWRKATA 79 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l-g~~~eAl~~~~~Al~--l~p~~~~a~~~la~~ 79 (379)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.++..+ |++++|+..+.+++. ..|....+++.+|.+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~ 122 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHH
Confidence 35667788888888888888888888888888888888888888888 888888888888888 556667888888888
Q ss_pred HHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+..+|++++|+..|++++.++|.+......++.+...+++.
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 163 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL 163 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH
Confidence 88888888888888888888888887777777766655543
No 92
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.31 E-value=2.2e-11 Score=109.39 Aligned_cols=115 Identities=17% Similarity=0.084 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|++++|+.+|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+|+.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 117 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE 117 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH
Confidence 45566677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCHHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHH
Q 016973 83 LEEYETAKVALEKGAS--LAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~--l~p~~~~~~~~l~~~~~~l 117 (379)
+|++++|+.+|++++. ..|.+..+...++.+...+
T Consensus 118 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 154 (252)
T 2ho1_A 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQM 154 (252)
T ss_dssp TTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHc
Confidence 7777777777777766 5555555555555544433
No 93
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.31 E-value=3.2e-11 Score=108.35 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATAC 80 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~--l~p~~~~a~~~la~~~ 80 (379)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..+.+++. ..|....+++.+|.++
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~ 151 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 151 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHH
Confidence 45667788888888888888888888888888888888888888888888888888888887 7777778888888888
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+.+|++++|+.+|++++.++|.+..+...++.+...++.
T Consensus 152 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 190 (252)
T 2ho1_A 152 LQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE 190 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Confidence 888888888888888888888877777666666555444
No 94
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.31 E-value=1.5e-11 Score=105.68 Aligned_cols=116 Identities=11% Similarity=0.071 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH-------------------------
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------- 58 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~------------------------- 58 (379)
.++..|..++..|++++|+..|++++..+|+++.+++.+|.++..+|++++|+..
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQ 87 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhh
Confidence 4677888888888888888888888888888888888888888888887776554
Q ss_pred ---------HHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC--hHHHHHHHHHHHHHHh
Q 016973 59 ---------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAE 119 (379)
Q Consensus 59 ---------~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~--~~~~~~l~~~~~~l~~ 119 (379)
+.+++.++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..+...+..+...++.
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC
Confidence 444556678888899999999999999999999999999999875 4466666666665544
No 95
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.30 E-value=2.3e-11 Score=116.98 Aligned_cols=117 Identities=19% Similarity=0.162 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+..|.+++..+|.++.++.++|.++.++|++++|+..|.+++.++|.+..+++.+|.++..
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 317 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999888899999999999999999999999999999888999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
+|++++|+..|+++++++|++......+..+...+++
T Consensus 318 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 354 (388)
T 1w3b_A 318 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 354 (388)
T ss_dssp TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 9999999999999999988888877777776554443
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.30 E-value=5.1e-11 Score=117.80 Aligned_cols=103 Identities=20% Similarity=0.313 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
++.++.+|..++..|+|++|+..|++++..+| ++.+++.+|.|++++|++++|+.+|.+++.++|.+..+++.+|.+|.
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.+|++++|+..|++++.++|.+..
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999986654
No 97
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.30 E-value=4e-11 Score=111.23 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCC------------ChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLAPG------------DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~------------~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+..|++++.+.|+ +......+..+...+++.
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCH
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCH
Confidence 99999999999999999998 677777777777766654
No 98
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.30 E-value=6.3e-11 Score=115.57 Aligned_cols=109 Identities=14% Similarity=0.197 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|++++..+|.++.+++.+|.+|..+|++++|+.+|.+++.++|.+..+++.+|.+|.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL 105 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCCh---HHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDS---RFTNLI 110 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~---~~~~~l 110 (379)
.+|++++|+..|++++.++|++. .....+
T Consensus 106 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 99999999999999999999987 554444
No 99
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.29 E-value=3.3e-11 Score=111.92 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS---------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKA 72 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~---------p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a 72 (379)
+..+...|..++..|++++|+..|.+++... |....++..+|.+|..+|++++|+..+.+++.++|.+..+
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 272 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAST 272 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHH
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHH
Confidence 3467889999999999999999999999986 6778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 73 YWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 73 ~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
++.+|.+|..+|++++|+.+|+++++++|++......+..+..
T Consensus 273 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 273 YSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888887753
No 100
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.29 E-value=8.3e-11 Score=114.73 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=109.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~----~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+...|..++..|++++|+.+|.+++...|.++ .++..+|.++.++|++++|+..+.+++.++|.+..+++.+|.+|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35569999999999999999999999999984 47899999999999999999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
..+|++++|+.+|+++++++|++......+..+...++..
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999888887765
No 101
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=5.1e-11 Score=114.48 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.+...|..+...|++++|+..|++++..+|++..++.++|.++...|++++|+..|.+++.++|.+..+++.+|.+|..+
T Consensus 171 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 250 (388)
T 1w3b_A 171 AWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQ 250 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHc
Confidence 45556666666666666666666666666666666666666666666666666666666666666666666666666667
Q ss_pred cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
|++++|+..|+++++++|++......+..+...++.
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 286 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS 286 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Confidence 777777777777766666666665555555444433
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.28 E-value=3.2e-11 Score=107.96 Aligned_cols=118 Identities=11% Similarity=0.064 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH------------------ccCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIK------------------LQNFTEAVADANR 61 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~---~~~~~ra~~~~~------------------lg~~~eAl~~~~~ 61 (379)
..++..|.+++..|+|++|+..|++++..+|++. .+++.+|.++.. +|++++|+..|.+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 4688999999999999999999999999999985 478999999987 5789999999999
Q ss_pred HHHhCCCCHHHH-----------------HHHHHHHHhccCHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHHHhh
Q 016973 62 AIELEPSMSKAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERIAEE 120 (379)
Q Consensus 62 Al~l~p~~~~a~-----------------~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~l~~~ 120 (379)
++...|++..+. +.+|.+|+.+|+|.+|+..|+++++..|+++ .+...++.+...++..
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 999999876544 6789999999999999999999999999987 4566667776666554
No 103
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.28 E-value=7.2e-12 Score=107.22 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=99.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHhccCH
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMKLEEY 86 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~-~~~lg~y 86 (379)
.+..++..|+|++|+..|.+++..+|.++.+++.+|.+|+.+|++++|+..|.+++.++|.++.+++.+|.+ ++..|++
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 344567889999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 87 --ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 87 --~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++|+.+|++++.++|++..+...++.+...++..
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 131 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQANY 131 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH
Confidence 9999999999999999999888888877665554
No 104
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.28 E-value=5.5e-11 Score=110.41 Aligned_cols=117 Identities=12% Similarity=-0.016 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 3 ~~l~~~g~~~~~~g-~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
..++..|..++..| ++++|+.+|.+++..+|.+..++..+|.++..+|++++|+..+.+++.+.|....+++.+|.+|.
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 45677888888888 88888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.+|++++|+..|++++.++|++..+...++.+...+++
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 208 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE 208 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc
Confidence 88888888888888888888888777777776655444
No 105
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.26 E-value=9.1e-11 Score=88.30 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.++..|..++..|+|++|+.+|.+++..+|.+..+++++|.++..+|++++|+..+.+++.++|.+..+++.+|.++..+
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 44555666666666666666666666666666666666666666666666666666666666666666666666655544
No 106
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.26 E-value=1e-11 Score=102.93 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=89.6
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 23 DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 23 ~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
..|.+++..+|.+...++.+|.+++..|+|++|+..|.+++.++|.++.+|+.+|.+|..+|+|++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhh
Q 016973 103 DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 103 ~~~~~~~l~~~~~~l~~~ 120 (379)
++.....++.+...+++.
T Consensus 85 ~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTHHHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHHHHHHcCCH
Confidence 999988888887776664
No 107
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.26 E-value=1.5e-11 Score=94.80 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=79.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~-~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.+.+|..++..|+|++|+..|++++..+|.+.. +++++|.||+.+|++++|+.+|.+++.++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 467889999999999999999999999999998 99999999999999999999999999999998888754
Q ss_pred cCHHHHHHHHHHHHhcCCCCh
Q 016973 84 EEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~ 104 (379)
+.+.+|+.+|.++..++|++.
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 667778888888887777654
No 108
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.25 E-value=7.9e-11 Score=111.56 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|+|++|+.+|.+++..+|.+..+++.+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|..
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 144 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTN 144 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
+|++++|+..|++++.++|.+....
T Consensus 145 ~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 145 ESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred cCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 9999999999999999999877544
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.23 E-value=1.6e-10 Score=108.14 Aligned_cols=111 Identities=10% Similarity=-0.009 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRA--QASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra--~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
.+...|.++...|++++|+..|++++..+|.+....+..+ .++...|++++|+..|++++..+|.++.+++.+|.++.
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~ 211 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM 211 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 3445555566666666666666666665555543322222 22222355566666666666555555556666666666
Q ss_pred hccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
.+|++++|...|++++.++|+++.+...+..+.
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLS 244 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 666666666666666666665555554444433
No 110
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.23 E-value=1.5e-10 Score=108.19 Aligned_cols=102 Identities=9% Similarity=0.060 Sum_probs=93.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHH-H
Q 016973 11 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-A 89 (379)
Q Consensus 11 ~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~-A 89 (379)
.+...|++++|+.+|++++..+|.++.+++++|.|+.++|++++|+..|.+++.++|+++.+++++|.++..+|++.+ +
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 344559999999999999999999999999999999999999999999999999999999999999999999999986 5
Q ss_pred HHHHHHHHhcCCCChHHHHHHHH
Q 016973 90 KVALEKGASLAPGDSRFTNLIKE 112 (379)
Q Consensus 90 ~~~~~~a~~l~p~~~~~~~~l~~ 112 (379)
..+++++++++|+++.+.....+
T Consensus 255 ~~~~~~~~~~~P~~~~~~d~~~~ 277 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPFIKEYRAK 277 (291)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHH
Confidence 68999999999999987655433
No 111
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=4.2e-11 Score=119.42 Aligned_cols=103 Identities=25% Similarity=0.378 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|..++..|+|++|+.+|++++..+|+++.+++.+|.||..+|++++|+..|.+++.++|.+..+++.+|.++.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 104 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANE 104 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHhcCCCChH
Q 016973 82 KLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.+|++++|+..|+ ++.++|+...
T Consensus 105 ~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 105 SLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHTCHHHHHHHHH-HHC-------
T ss_pred HcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999996 8888887654
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.22 E-value=1.1e-10 Score=111.49 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..+++.|.+++..|+|++|+.+|+++|.++|+++.+++++|.+|+.+|++++|+.+|.+|+.++|.+..+++.+|.++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHH-HHHHHHH
Q 016973 82 KLEEYETAK-VALEKGA 97 (379)
Q Consensus 82 ~lg~y~~A~-~~~~~a~ 97 (379)
.+|++++|. ..|++++
T Consensus 276 ~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 276 RIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 999999994 4555444
No 113
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.20 E-value=1.9e-10 Score=106.55 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++.+|..++..|+|++|+.+|++++..+|.+..++..+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHH
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNL 109 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~ 109 (379)
+|++++|+..|++++.++|.+......
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~~ 128 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGSV 128 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC---
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 999999999999999999987765443
No 114
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.20 E-value=6.1e-10 Score=100.78 Aligned_cols=104 Identities=12% Similarity=0.072 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-----------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS----------- 70 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~----------- 70 (379)
+..+...|..++..|++++|+.+|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|.+.
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 156 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQ 156 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999988753
Q ss_pred -----------------------------------------------------------HHHHHHHHHHHhccCHHHHHH
Q 016973 71 -----------------------------------------------------------KAYWRKATACMKLEEYETAKV 91 (379)
Q Consensus 71 -----------------------------------------------------------~a~~~la~~~~~lg~y~~A~~ 91 (379)
.+++.+|.+|..+|++++|+.
T Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 236 (275)
T 1xnf_A 157 KLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATA 236 (275)
T ss_dssp HHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHH
Confidence 667888999999999999999
Q ss_pred HHHHHHhcCCCChH
Q 016973 92 ALEKGASLAPGDSR 105 (379)
Q Consensus 92 ~~~~a~~l~p~~~~ 105 (379)
.|++++.++|++..
T Consensus 237 ~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 237 LFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHTTCCTTCH
T ss_pred HHHHHHhCCchhHH
Confidence 99999999987754
No 115
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.20 E-value=2.7e-10 Score=95.18 Aligned_cols=97 Identities=18% Similarity=0.236 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH--HHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRK--ATAC 80 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~l--a~~~ 80 (379)
..+...|.+++..|+|++|+..|.+++..+|.++.+++++|.++..+|++++|+..+.+++.++|.+..++..+ +..+
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 127 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 127 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999888554 4458
Q ss_pred HhccCHHHHHHHHHHHHhc
Q 016973 81 MKLEEYETAKVALEKGASL 99 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l 99 (379)
..+|++++|+..+.++..+
T Consensus 128 ~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 128 VKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHHH
Confidence 8999999999998876543
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.18 E-value=1.3e-10 Score=108.23 Aligned_cols=104 Identities=15% Similarity=0.003 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCCCC-----
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKL-QNFTEAVADANRAIELEPSM----- 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~l-g~~~eAl~~~~~Al~l~p~~----- 69 (379)
+..+.+.|.++...|+|++|+.+|++++.+.+.. ..++.++|.+|... |++++|+.+|.+|+.+.|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 4567889999999999999999999999997643 56889999999995 99999999999999998754
Q ss_pred -HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChH
Q 016973 70 -SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 70 -~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
..++.++|.+|..+|+|++|+.+|++++.+.|++..
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 568999999999999999999999999999987654
No 117
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=1.7e-10 Score=114.94 Aligned_cols=116 Identities=15% Similarity=0.186 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
.++..|..++..|++++|+.+|.+++..+|.++.++..+|.++..+|++++|+..|.+++.++|.+..+++.+|.+++.+
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45666777777777777777777777777777777777777777777888888888877777777777777788888888
Q ss_pred cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 84 g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
|++++|+..|++++.++|++..+...++.+...++.
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 393 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGD 393 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 888888888888777777777777666666555444
No 118
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.17 E-value=3.1e-10 Score=115.58 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++..|.+++..|++++|+.+|++++..+|++..+++++|.+|..+|++++|+..|.+++.++|.+..+++.+|.++.
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 136 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRR 136 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc---cCHHHHHHHHHHHHhcCCCChH
Q 016973 82 KL---EEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 82 ~l---g~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.+ |++++|+..|+++++.+|.+..
T Consensus 137 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 137 RLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp HTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred HhhccccHHHHHHHHHHHHhcCCcccC
Confidence 99 9999999999999999998644
No 119
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.16 E-value=1.8e-10 Score=107.34 Aligned_cols=105 Identities=17% Similarity=0.066 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH---
Q 016973 2 ATDLEKKAKEAFID-DYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK--- 71 (379)
Q Consensus 2 A~~l~~~g~~~~~~-g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~--- 71 (379)
+..+...|.++... |++++|+.+|++++.+.|.. ..++.++|.+|..+|+|++|+..|.+++.+.|.+..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 196 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW 196 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 34678899999996 99999999999999997754 567899999999999999999999999999987543
Q ss_pred ----HHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHH
Q 016973 72 ----AYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 72 ----a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
+++++|.++..+|++++|+.+|++++.++|+....
T Consensus 197 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 197 SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999986653
No 120
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.16 E-value=2.6e-10 Score=88.81 Aligned_cols=74 Identities=19% Similarity=0.232 Sum_probs=67.9
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh
Q 016973 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 31 ~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
.+|+++.+++.+|.+|+.+|+|++|+..|.+++.++|.++.+|+.+|.+|..+|++++|+.+|++++++.|...
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999987543
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=8e-10 Score=108.64 Aligned_cols=119 Identities=17% Similarity=0.116 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI---------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE------ 66 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~---------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~------ 66 (379)
+..+...|.+++..|+|++|++.|++|+++ +|.....|.++|.+|+.+|++++|+.++.+++.+.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 345667899999999999999999999987 67778899999999999999999999999999884
Q ss_pred --CCCHHHHHHHHHHHHhc--cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 67 --PSMSKAYWRKATACMKL--EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 67 --p~~~~a~~~la~~~~~l--g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+..+.++..+|.++..+ ++|++|+.+|+++++++|+++.+...+..+...++..
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 35688999999888765 4799999999999999999999888888777666554
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.15 E-value=1.4e-10 Score=104.84 Aligned_cols=119 Identities=21% Similarity=0.218 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL-------- 65 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~--------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-------- 65 (379)
+..+...|..++..|+|++|+.+|.+++.. +|....++.++|.+|..+|++++|+..+.+++.+
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 122 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF 122 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC
Confidence 356788999999999999999999999988 3555788999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHHHhh
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+|....+++.+|.+|+.+|++++|+.+|++++.+ .|....+...++.+...+++.
T Consensus 123 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 123 HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 4677899999999999999999999999999998 555555666666666655553
No 123
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.14 E-value=5e-10 Score=87.32 Aligned_cols=86 Identities=21% Similarity=0.242 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC------hHHHH
Q 016973 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTN 108 (379)
Q Consensus 35 ~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~ 108 (379)
++..++.+|.+++.+|+|++|+..|.+++.++|.++.+++.+|.+|+.+|+|++|+.+|+++++++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999999999999999999999999998 66677
Q ss_pred HHHHHHHHHHhh
Q 016973 109 LIKECEERIAEE 120 (379)
Q Consensus 109 ~l~~~~~~l~~~ 120 (379)
.++.+...++..
T Consensus 83 ~~~~~~~~~~~~ 94 (111)
T 2l6j_A 83 RLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhH
Confidence 777777777754
No 124
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.8e-10 Score=91.64 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 34 ~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
..+..+..+|.+++..|+|++|+..|.+++.++|.++.+++.+|.+|+.+|+|++|+.+|+++++++|++......++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHhh
Q 016973 114 EERIAEE 120 (379)
Q Consensus 114 ~~~l~~~ 120 (379)
...+++.
T Consensus 82 ~~~~~~~ 88 (126)
T 3upv_A 82 QIAVKEY 88 (126)
T ss_dssp HHHTTCH
T ss_pred HHHHhCH
Confidence 7776654
No 125
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.13 E-value=1.8e-10 Score=93.88 Aligned_cols=79 Identities=24% Similarity=0.248 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
+.++.++|.++++.|+|++|+.+|.+|+.++|.++.+|+++|.+|+.+|+|++|+.+|+++++++|++......+..+.
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999999999987764333333333
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.13 E-value=4.7e-10 Score=84.28 Aligned_cols=84 Identities=24% Similarity=0.384 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 34 ~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
.+..+++.+|.+++..|++++|+..|.+++.++|.+..+++.+|.+++.+|++++|+.+|++++.++|++......++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHH
Q 016973 114 EERI 117 (379)
Q Consensus 114 ~~~l 117 (379)
...+
T Consensus 87 ~~~~ 90 (91)
T 1na3_A 87 KQKQ 90 (91)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 127
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.11 E-value=9.5e-10 Score=111.33 Aligned_cols=116 Identities=15% Similarity=0.106 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCC-HHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL------EPSM-SKAYWRK 76 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l------~p~~-~~a~~~l 76 (379)
.+...|..+...|++++|+.+|++++..+|.++.++..+|.+|.+.|++++|+..|.+++.+ +|.. ..+++.+
T Consensus 443 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l 522 (597)
T 2xpi_A 443 PYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANL 522 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Confidence 45566667777777777777777777777777777777777777777777777777777666 4443 5667777
Q ss_pred HHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 77 ATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 77 a~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
|.+|..+|++++|+..|+++++++|++......+..+...+++
T Consensus 523 ~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 523 GHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 7777777777777777777777777666666666655554443
No 128
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.07 E-value=1.8e-09 Score=109.30 Aligned_cols=117 Identities=13% Similarity=0.034 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|..++..|++++|+.+|++++..+|.+..++..++.+|.+.|++++|+..|++++.+.|.+..+++.+|.+|..
T Consensus 374 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 453 (597)
T 2xpi_A 374 VTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ 453 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 35667788889999999999999999998888888889999999999999999999999999988888899999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
.|++++|+..|+++++++|.+......+..+....+.
T Consensus 454 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 490 (597)
T 2xpi_A 454 LGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSD 490 (597)
T ss_dssp HTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 9999999999999999988888777766666555444
No 129
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.07 E-value=1.2e-09 Score=86.86 Aligned_cols=84 Identities=24% Similarity=0.173 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|.+++..|++++|+.+|.+++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCH
Q 016973 83 LEEY 86 (379)
Q Consensus 83 lg~y 86 (379)
+|++
T Consensus 127 ~~~~ 130 (131)
T 2vyi_A 127 LREA 130 (131)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9876
No 130
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.07 E-value=1.5e-09 Score=87.75 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 38 ~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
.++.+|.+++..|++++|+..|.+++.++|.++.+|+.+|.++..+|++++|+.+|+++++++|++..+...++.+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999998888888877
Q ss_pred Hhh
Q 016973 118 AEE 120 (379)
Q Consensus 118 ~~~ 120 (379)
++.
T Consensus 99 g~~ 101 (121)
T 1hxi_A 99 HNA 101 (121)
T ss_dssp HHH
T ss_pred CCH
Confidence 775
No 131
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.07 E-value=8.8e-10 Score=108.88 Aligned_cols=113 Identities=22% Similarity=0.183 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH---ccCHHHHHHHHHHHHHhCCCCHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE------LFADRAQASIK---LQNFTEAVADANRAIELEPSMSKAY 73 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~------~~~~ra~~~~~---lg~~~eAl~~~~~Al~l~p~~~~a~ 73 (379)
..+...|..++..|++++|+.+|.+++..+|.+.. +++.+|.++.. +|++++|+..+.+++.++|.+..++
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 452 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAK 452 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 34667778888888888888888888887777643 77888888888 8888888888888888888888888
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 74 ~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
+.+|.+|..+|++++|+..|+++++++|++......+..+..
T Consensus 453 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 453 IGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 888888888888888888888888888887776665544443
No 132
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.06 E-value=8.6e-10 Score=96.22 Aligned_cols=95 Identities=16% Similarity=0.068 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+...|.+++..|+|++|+.+|++++.++|.+..+++++|.+|+.+|++++|+.+|.+++.++|.+..++..++.++..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHH-HHHHHHH
Q 016973 83 LEEYETAK-VALEKGA 97 (379)
Q Consensus 83 lg~y~~A~-~~~~~a~ 97 (379)
++++.++. ..|...+
T Consensus 169 ~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHHHHHHHHh
Confidence 99998887 4444443
No 133
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.06 E-value=8.1e-10 Score=106.47 Aligned_cols=118 Identities=10% Similarity=0.147 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSK 71 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~----~~~~~ra~~~~~lg~~~eAl~~~~~Al~l------~p~~~~ 71 (379)
+..++..|..++..|+|++|+.+|++++...|.+. .+++.+|.+|+.+|++++|+..+.+++.+ .+....
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 34678899999999999999999999999999986 58999999999999999999999999998 567789
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHhc------CCCChHHHHHHHHHHHHHHh
Q 016973 72 AYWRKATACMKLEEYETAKVALEKGASL------APGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 72 a~~~la~~~~~lg~y~~A~~~~~~a~~l------~p~~~~~~~~l~~~~~~l~~ 119 (379)
+++.+|.+|+.+|++++|+.+|++++.+ .+........++.+...++.
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999999999998 34444466666667666666
No 134
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.06 E-value=6.4e-10 Score=110.74 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
+..++++|.+++..|+|++|+.+|+++|.++|+++.+|+++|.||+.+|+|++|+.+|.+|+.++|++..++..++.++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCHHHHHHH
Q 016973 82 KLEEYETAKVA 92 (379)
Q Consensus 82 ~lg~y~~A~~~ 92 (379)
.++++++|...
T Consensus 397 ~~~~~~~a~~~ 407 (457)
T 1kt0_A 397 KAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 135
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.06 E-value=8.2e-10 Score=93.34 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 016973 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (379)
Q Consensus 32 ~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~ 111 (379)
++.++..++.+|.+++..|+|++|+..|.+++.++|.++.+++.+|.+|+.+|+|++|+.+|+++++++|++..+...++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34557889999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhh
Q 016973 112 ECEERIAEE 120 (379)
Q Consensus 112 ~~~~~l~~~ 120 (379)
.+...+++.
T Consensus 87 ~~~~~~g~~ 95 (164)
T 3sz7_A 87 LARFDMADY 95 (164)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHccCH
Confidence 877765553
No 136
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.06 E-value=1.6e-09 Score=87.82 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=83.0
Q ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHH
Q 016973 30 EISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (379)
Q Consensus 30 ~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~ 109 (379)
..++.++..++.+|.+++..|+|++|+..|.+++.++|.++.+++.+|.+++.+|+|++|+.+|+++++++|++..+...
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhh
Q 016973 110 IKECEERIAEE 120 (379)
Q Consensus 110 l~~~~~~l~~~ 120 (379)
++.+...++..
T Consensus 83 l~~~~~~~~~~ 93 (137)
T 3q49_B 83 LGQCQLEMESY 93 (137)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHHhhH
Confidence 88887766554
No 137
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.05 E-value=8.7e-10 Score=92.98 Aligned_cols=86 Identities=13% Similarity=0.051 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-KAYWRKATACM 81 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~-~a~~~la~~~~ 81 (379)
..+.++|.+++..|+|++|+..|+++|.++|.++.+|+++|.+|+.+|+|++|+.+|.+++.++|.+. .+...++.+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999998 66777887777
Q ss_pred hccCHHH
Q 016973 82 KLEEYET 88 (379)
Q Consensus 82 ~lg~y~~ 88 (379)
.++++.+
T Consensus 144 ~~~~~~~ 150 (162)
T 3rkv_A 144 RRAEKKA 150 (162)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 6665543
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.04 E-value=1.4e-09 Score=101.80 Aligned_cols=114 Identities=10% Similarity=-0.013 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~-~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
..++..|..+...|++++|+..|+++|..+|.++. +|.++|.++.++|++++|+..|.+|+.++|....+|+..+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~ 179 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 35677788888888888888888888888888776 78888888888888888888888888888877777776666544
Q ss_pred h-ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 82 K-LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 82 ~-lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
. +|++++|+.+|+++++++|++..++..+..+...
T Consensus 180 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 215 (308)
T 2ond_A 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 215 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 3 6888888888888888888877766555555443
No 139
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.04 E-value=6.1e-10 Score=100.60 Aligned_cols=98 Identities=21% Similarity=0.199 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL-------- 65 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~--------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-------- 65 (379)
+..+...|.+++..|++++|+.+|.+++.. +|....++.++|.+|..+|++++|+..+.+++.+
T Consensus 85 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 164 (283)
T 3edt_B 85 AATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD 164 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 346788999999999999999999999998 4666889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
.|....+++.+|.+|+.+|++++|+.+|++++.+
T Consensus 165 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 165 DPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7777899999999999999999999999999987
No 140
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.04 E-value=3.1e-09 Score=108.78 Aligned_cols=117 Identities=8% Similarity=-0.008 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCC
Q 016973 2 ATDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSM 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~----------y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg--~~~eAl~~~~~Al~l~p~~ 69 (379)
...|..+|.++...|+ |++|+.+|+++|..+|.++.+|+.|+.++.+++ ++++|+.++.++++++|.+
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN 142 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc
Confidence 3578889999999888 999999999999999999999999999999999 7799999999999999999
Q ss_pred HHHHHHHHHHHHhcc-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 70 SKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 70 ~~a~~~la~~~~~lg-~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
..||..++.++..+| .++++++++.++++.+|++..++..+..+...+.
T Consensus 143 ~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~ 192 (567)
T 1dce_A 143 FHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 192 (567)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhc
Confidence 999999999999999 9999999999999999999999999988876653
No 141
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.04 E-value=1.6e-09 Score=99.92 Aligned_cols=117 Identities=9% Similarity=0.148 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~----~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l------~p~~~~a 72 (379)
..++..|..++..|+|++|+.+|++++...|.+ ..++..+|.++..+|++++|+..+.+++.+ .+....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 467889999999999999999999999999998 468889999999999999999999999988 4456789
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHhcCCCChH------HHHHHHHHHHHHHh
Q 016973 73 YWRKATACMKLEEYETAKVALEKGASLAPGDSR------FTNLIKECEERIAE 119 (379)
Q Consensus 73 ~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~------~~~~l~~~~~~l~~ 119 (379)
++.+|.+++.+|++++|+..|++++.+.+.... ....++.+...++.
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999998764432 44455555555555
No 142
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.04 E-value=1.9e-10 Score=109.88 Aligned_cols=102 Identities=11% Similarity=0.001 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-Hh
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC-MK 82 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~-~~ 82 (379)
.++++|.+++..|+|++|+.+|+++|.++|++..+|+++|.+|+.+|+|++|+.+|.+++.++|.+..++..++.+. ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999984 55
Q ss_pred ccCHHHHHHHHHHHHhcCCCChH
Q 016973 83 LEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.+.++.+...|.+++.+.|+++.
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC
Confidence 67788899999999999998764
No 143
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.03 E-value=3.4e-10 Score=113.46 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-- 79 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~-- 79 (379)
+..+...|.+++..|+|++|+..|+++++++|.++.+++++|.+|..+|++++|+..|.+|++++|.+..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhccCHHHHHHHHH-----------HHHhcCCCC
Q 016973 80 CMKLEEYETAKVALE-----------KGASLAPGD 103 (379)
Q Consensus 80 ~~~lg~y~~A~~~~~-----------~a~~l~p~~ 103 (379)
+..+|+|++|+..++ +++.++|+.
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 899999999999999 788777653
No 144
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.03 E-value=1.7e-09 Score=86.61 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|.+++..|++++|+.+|.+++..+|.+..+++++|.++..+|++++|+..|.+++.++|.+..+++.++.+++.
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccC
Q 016973 83 LEE 85 (379)
Q Consensus 83 lg~ 85 (379)
+|+
T Consensus 131 ~~~ 133 (133)
T 2lni_A 131 QYN 133 (133)
T ss_dssp HTC
T ss_pred hcC
Confidence 774
No 145
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.02 E-value=3.8e-09 Score=98.91 Aligned_cols=106 Identities=13% Similarity=0.092 Sum_probs=95.7
Q ss_pred HHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q 016973 3 TDLEKKAKEAF-------IDDYF-------ELAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (379)
Q Consensus 3 ~~l~~~g~~~~-------~~g~y-------~~Al~~y~~al~-~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p 67 (379)
+.|+..|..+. ..|++ ++|+..|++|+. ++|++..+|..+|.++..+|++++|+..|++++.++|
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 130 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 130 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc
Confidence 45667777665 35885 999999999999 7999999999999999999999999999999999999
Q ss_pred CCHH-HHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHH
Q 016973 68 SMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (379)
Q Consensus 68 ~~~~-a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (379)
.++. +|+.+|.++.++|++++|+..|+++++++|.+..+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 131 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 9887 9999999999999999999999999999998766543
No 146
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.01 E-value=1.7e-09 Score=103.21 Aligned_cols=118 Identities=10% Similarity=0.157 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIELE------PSMSK 71 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~----~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~------p~~~~ 71 (379)
+..++..|..++..|+|++|+.+|++++...|.+ ..++..+|.+|+.+|++++|+..+.+++.+. +....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4578899999999999999999999999999998 4688999999999999999999999999883 45678
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHHHh
Q 016973 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (379)
Q Consensus 72 a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~l~~ 119 (379)
+++.+|.+|..+|++++|+.+|++++.+.+... .....++.+...++.
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999876432 255556666666665
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.01 E-value=1.1e-08 Score=93.28 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKA 77 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p~~~~a~~~la 77 (379)
+..++..|..++..|++++|+.+|.+++. +.++.+++++|.+|.. .+++++|+..|.+++.++ ++.+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 46788999999999999999999999998 7788999999999999 999999999999999986 799999999
Q ss_pred HHHHh----ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 78 TACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 78 ~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
.+|.. .+++++|+.+|++++.++ +......++.+...
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 99999 999999999999999884 66666666666543
No 148
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.01 E-value=6.5e-10 Score=86.11 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC--ChHHHHH
Q 016973 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNL 109 (379)
Q Consensus 32 ~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~--~~~~~~~ 109 (379)
+|++..+++.+|.+++..|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|. +..+...
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999 8888888
Q ss_pred HHHHHHHH-Hh
Q 016973 110 IKECEERI-AE 119 (379)
Q Consensus 110 l~~~~~~l-~~ 119 (379)
++.+...+ ++
T Consensus 82 l~~~~~~~~~~ 92 (112)
T 2kck_A 82 KADALRYIEGK 92 (112)
T ss_dssp HHHHHTTCSSC
T ss_pred HHHHHHHHhCC
Confidence 88777666 44
No 149
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.00 E-value=5.4e-09 Score=98.66 Aligned_cols=117 Identities=8% Similarity=0.055 Sum_probs=108.1
Q ss_pred HHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHH--HHHHHHHHHHHhCCCCHHHH
Q 016973 3 TDLEKKAKEA----FID---DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFT--EAVADANRAIELEPSMSKAY 73 (379)
Q Consensus 3 ~~l~~~g~~~----~~~---g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~--eAl~~~~~Al~l~p~~~~a~ 73 (379)
..+..++.++ ... +++++++.+++++|..+|.+..+|.+|+.++.++|.++ +++..+.+++.++|.+..||
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW 183 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 183 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHH
Confidence 3566777777 555 79999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhccC------HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 74 WRKATACMKLEE------YETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 74 ~~la~~~~~lg~------y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
..++.++..+++ +++++.++.+++.++|+|..++..+..+...++.
T Consensus 184 ~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 184 SHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 999999999998 9999999999999999999999999888776654
No 150
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.00 E-value=2.5e-09 Score=85.28 Aligned_cols=76 Identities=13% Similarity=-0.020 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la 77 (379)
+..++..|.+++..|+|++|+..|.+++..+|+++.+++++|.|+..+|++++|+..+.+++.+.|.++.......
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999999987654433
No 151
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.00 E-value=4.2e-09 Score=88.49 Aligned_cols=104 Identities=10% Similarity=0.068 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHhccCHHHHHH
Q 016973 17 YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELE-P-SMSKAYWRKATACMKLEEYETAKV 91 (379)
Q Consensus 17 ~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg---~~~eAl~~~~~Al~l~-p-~~~~a~~~la~~~~~lg~y~~A~~ 91 (379)
....+.+.|.+.+..++.+....+++|.|+.+.+ ++++++..++.++..+ | ...+++|.+|+.|+++|+|++|+.
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 4567788899999999999999999999999988 6779999999999998 7 678999999999999999999999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 92 ALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 92 ~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+++++++++|++.++...+..+..++...
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888774
No 152
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.00 E-value=1.4e-09 Score=89.41 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------ 69 (379)
+..+...|..++..|+|++|+..|.+++...+.. ..++..+|.++..+|++++|+..+.+++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567889999999999999999999999985432 2578999999999999999999999999886542
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
..+++.+|.++..+|++++|+.+|++++.+.+
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999998743
No 153
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.98 E-value=4.9e-09 Score=98.92 Aligned_cols=115 Identities=4% Similarity=-0.198 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHc---cCHHHHHHHHHHHHHhCCCCHHHH
Q 016973 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQAS----IKL---QNFTEAVADANRAIELEPSMSKAY 73 (379)
Q Consensus 3 ~~l~~~g~~~~~~g--~y~~Al~~y~~al~~~p~~~~~~~~ra~~~----~~l---g~~~eAl~~~~~Al~l~p~~~~a~ 73 (379)
..+..+|.++...+ ++++|+.+++++|..+|.+..+|..|+.++ ..+ +++++++..+.+++.++|.+..+|
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW 147 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVW 147 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 46777888888888 888888888888888888888888888888 666 678888888888888888888888
Q ss_pred HHHHHHHHhccCHH--HHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 74 WRKATACMKLEEYE--TAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 74 ~~la~~~~~lg~y~--~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
+.++.++..+|.++ +++.++.++++.+|.|..++..+..+...+
T Consensus 148 ~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l 193 (306)
T 3dra_A 148 SYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSK 193 (306)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 88888888888887 888888888888888888777766664443
No 154
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=1.5e-09 Score=99.69 Aligned_cols=118 Identities=21% Similarity=0.244 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE-------- 66 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~--------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~-------- 66 (379)
..+...|..++..|++++|+.+|.+++.. .+....++..+|.+|..+|++++|+..+.+++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 46788999999999999999999999998 35557889999999999999999999999999884
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc--------CCCChHHHHHHHHHHHHHHhh
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l--------~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+....+++.+|.++..+|++++|+.+|++++.+ .|........++.+...+++.
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 567789999999999999999999999999998 454455566666666555543
No 155
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.97 E-value=1.6e-09 Score=104.21 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPSM----- 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~-------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~----- 69 (379)
+..+...|..++..|+++.|+..|.+|+.+.+.. ..++.++|.+|..+|++++|+..|.+|+.+.+..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 222 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQL 222 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHH
Confidence 3456677777777777777777777777763322 3467777777777777777777777777664422
Q ss_pred -HHHHHHHHHHHHhccCHHHHHHHHHHHHhc-----C-CCChHHHHHHHHHHHHHH
Q 016973 70 -SKAYWRKATACMKLEEYETAKVALEKGASL-----A-PGDSRFTNLIKECEERIA 118 (379)
Q Consensus 70 -~~a~~~la~~~~~lg~y~~A~~~~~~a~~l-----~-p~~~~~~~~l~~~~~~l~ 118 (379)
..+++++|.+|..+|+|++|+.+|++++.+ + |....+...++.+...++
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG 278 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC
Confidence 246777777777777777777777777773 3 444444455555544433
No 156
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.97 E-value=1.3e-09 Score=101.18 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---C----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---S----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~---~----p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------ 69 (379)
..+...|.+++..|+|++|+.+|.+++.. . +....+++++|.+|.++|+|++|+..+.+|+.+.+..
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~ 235 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 45788999999999999999999999963 1 1225688999999999999999999999999987533
Q ss_pred HHHHHHHHHHHHhcc-CHHHHHHHHHHHHhcC
Q 016973 70 SKAYWRKATACMKLE-EYETAKVALEKGASLA 100 (379)
Q Consensus 70 ~~a~~~la~~~~~lg-~y~~A~~~~~~a~~l~ 100 (379)
+.+++++|.+|..+| .+++|+.+|++|+.+.
T Consensus 236 ~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 889999999999999 5799999999998763
No 157
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.96 E-value=2.1e-09 Score=91.30 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHhccCHHHHHHHHHHHHhc----
Q 016973 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSK-----AYWRKATACMKLEEYETAKVALEKGASL---- 99 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~-------~~~-----a~~~la~~~~~lg~y~~A~~~~~~a~~l---- 99 (379)
...+.++|.+++++|+|++|+..|++|++++|. +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 466889999999999999999999999999998 444 9999999999999999999999999999
Q ss_pred ---CCCChHHH----HHHHHHHHHHHhh
Q 016973 100 ---APGDSRFT----NLIKECEERIAEE 120 (379)
Q Consensus 100 ---~p~~~~~~----~~l~~~~~~l~~~ 120 (379)
+|++..++ ..++.+...++..
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRG 118 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCH
Confidence 99998888 7777776666554
No 158
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.96 E-value=2.4e-09 Score=100.37 Aligned_cols=101 Identities=24% Similarity=0.258 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------ 69 (379)
+..+...|.++.. |+|++|+.+|++++.+.+.. ..++.++|.+|..+|+|++|+..|.+++.+.+.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTC 194 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHH
Confidence 3466788888888 99999999999999986543 5778899999999999999999999999886543
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
..+++.+|.+++.+|++++|+.+|++++ ++|...
T Consensus 195 ~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 195 YKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3578889999999999999999999999 988654
No 159
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.96 E-value=4.1e-09 Score=80.89 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=66.2
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 39 ~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~-a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
.+.+|.+++..|++++|+..|.+++.++|.+.. +++.+|.+|+.+|++++|+.+|+++++++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999999876
No 160
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.96 E-value=4.2e-09 Score=102.03 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..+.++|.+++..|+|++|+.+|+++|.++|.++.+++++|.+|+.+|++++|+.+|.+|++++|.+..++..++.++..
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHH
Q 016973 83 LEEYETAKVA 92 (379)
Q Consensus 83 lg~y~~A~~~ 92 (379)
+++++++...
T Consensus 354 ~~~~~~a~k~ 363 (370)
T 1ihg_A 354 IKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999988653
No 161
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.96 E-value=4e-09 Score=81.99 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATA 79 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~--~~~a~~~la~~ 79 (379)
+..++..|.+++..|+|++|+..|+++++++|+++.+++++|.||..+|++++|+..|.+++.+.+. +..+...+...
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999999764 44444455555
Q ss_pred HHhcc
Q 016973 80 CMKLE 84 (379)
Q Consensus 80 ~~~lg 84 (379)
+...+
T Consensus 87 l~~~~ 91 (100)
T 3ma5_A 87 KLKAE 91 (100)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 44443
No 162
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.94 E-value=4e-09 Score=97.92 Aligned_cols=99 Identities=20% Similarity=0.235 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAI---EISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPS------ 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al---~~~p~~~----~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~------ 68 (379)
+..+...|..++..|+|++|+.+|++++ ...+.+. .+++++|.+|..+|+|++|+..+.+++.+.+.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 3467788999999999999999999998 4455542 58888999999999999999999999887542
Q ss_pred CHHHHHHHHHHHHhccCHHHH-HHHHHHHHhcC
Q 016973 69 MSKAYWRKATACMKLEEYETA-KVALEKGASLA 100 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A-~~~~~~a~~l~ 100 (379)
.+.+++++|.+|..+|++++| ..+|++++.+.
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 277889999999999999999 77788888764
No 163
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.93 E-value=2.6e-09 Score=98.15 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~--------p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l--------~ 66 (379)
..+...|..++..|++++|+.+|.+++.+. +....++..+|.++..+|++++|+..+.+++.+ .
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 191 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDD 191 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 467889999999999999999999999984 555778999999999999999999999999998 6
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
|....+++.+|.+|..+|++++|+.+|++++.+
T Consensus 192 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 192 PNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999975
No 164
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.93 E-value=4.6e-09 Score=86.24 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------CCH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEP------SMS 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p------~~~ 70 (379)
..+...|..++..|+|++|+..|.+++.+.+.. ..++.++|.++..+|++++|+..+.+++.+.+ ...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 467889999999999999999999999985443 56889999999999999999999999998843 236
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
.+++.+|.+++.+|++++|+.+|++++++...
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999887543
No 165
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.93 E-value=9.7e-09 Score=87.88 Aligned_cols=80 Identities=10% Similarity=0.002 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhccCHHHHHHHHHHH
Q 016973 19 ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETAKVALEKG 96 (379)
Q Consensus 19 ~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~--~~a~~~la~~~~~lg~y~~A~~~~~~a 96 (379)
..|+..|++++..+|+++.+++.+|.++..+|++++|+..|.+++.++|.. ..+++.+|.++..+|++++|+..|+++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 346777778888899999999999999999999999999999999999975 669999999999999999999999988
Q ss_pred Hh
Q 016973 97 AS 98 (379)
Q Consensus 97 ~~ 98 (379)
+.
T Consensus 171 l~ 172 (176)
T 2r5s_A 171 LY 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 166
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.92 E-value=1.7e-08 Score=79.27 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
..++..|..++..|++++|+.+|.+++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cc
Q 016973 83 LE 84 (379)
Q Consensus 83 lg 84 (379)
+|
T Consensus 124 ~g 125 (125)
T 1na0_A 124 QG 125 (125)
T ss_dssp HC
T ss_pred cc
Confidence 65
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.92 E-value=2.9e-09 Score=91.97 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CC----C
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL---EP----S 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l---~p----~ 68 (379)
+..+...|..++..|+|++|+.+|.+++.+ .+....++.++|.+|..+|++++|+..+.+++.+ .+ .
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 356788999999999999999999999994 3444678999999999999999999999999988 33 2
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcC
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~ 100 (379)
...+++.+|.++..+|++++|+.+|++++.+.
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999998764
No 168
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.91 E-value=3.2e-09 Score=98.50 Aligned_cols=116 Identities=17% Similarity=0.109 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-----H--HHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-----K--AYW 74 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~-----~--a~~ 74 (379)
+..+...|.+++..|+|++|+..|++++.++|++..+++++|.+|..+|++++|+.+|.+++.++|++. . ..+
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~ 117 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL 117 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999999999999987531 1 111
Q ss_pred HHH----------------------HHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 75 RKA----------------------TACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 75 ~la----------------------~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
+++ ...+..|++++|+..|+++++++|++..+...+..+....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 182 (281)
T 2c2l_A 118 RIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKH 182 (281)
T ss_dssp HHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHH
Confidence 111 1123478999999999999999999877666665554443
No 169
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.91 E-value=7.8e-09 Score=105.76 Aligned_cols=113 Identities=9% Similarity=-0.039 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (379)
Q Consensus 3 ~~l~~~g~~~~~~g--~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg-~~~eAl~~~~~Al~l~p~~~~a~~~la~~ 79 (379)
..|..+|.++...+ +|++|+.+|+++|+.+|.+..+|.+|+.++.++| .++++++++.+++.++|.+..+|+.+|.+
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 47888999999999 7799999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhc--------------cCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 80 ~~~l--------------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
+..+ +.+++|++++.+|+.++|++..++..+..+..
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~ 237 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHS
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHh
Confidence 9986 77899999999999999999999988877743
No 170
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.91 E-value=1.5e-08 Score=94.07 Aligned_cols=114 Identities=10% Similarity=0.011 Sum_probs=90.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHH---hCCCC----HH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIE---LEPSM----SK 71 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~---l~p~~----~~ 71 (379)
++..|..+...|+|++|+..|.+++...+.. ..++.++|.+|..+|+|++|+..|.+|+. ..+.. ..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~ 197 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHH
Confidence 4557888888999999999999999875443 56899999999999999999999999994 45553 26
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHHHHHH
Q 016973 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (379)
Q Consensus 72 a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~ 118 (379)
+++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...++
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999886421 234444555544443
No 171
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.90 E-value=3.3e-08 Score=94.13 Aligned_cols=116 Identities=6% Similarity=-0.029 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC--HHHHHHHHHHHHHhCCCCH
Q 016973 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQN--FTEAVADANRAIELEPSMS 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~----------y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~--~~eAl~~~~~Al~l~p~~~ 70 (379)
..+..++.++...+. +.+++.+++.+|..+|.++.+|..|+.++..++. +++++.++.+++.++|.+.
T Consensus 65 taWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy 144 (331)
T 3dss_A 65 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 144 (331)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH
Confidence 456777777776665 7999999999999999999999999999999994 9999999999999999999
Q ss_pred HHHHHHHHHHHhccC-HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 71 KAYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 71 ~a~~~la~~~~~lg~-y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
.+|..++.++..+|. +++++.++.+++..+|.|..++..+..+...+.
T Consensus 145 ~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~ 193 (331)
T 3dss_A 145 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 193 (331)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhh
Confidence 999999999999999 699999999999999999999998888866653
No 172
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.90 E-value=2.9e-08 Score=94.45 Aligned_cols=111 Identities=9% Similarity=-0.034 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATA 79 (379)
Q Consensus 3 ~~l~~~g~~~~~~g--~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~-~~eAl~~~~~Al~l~p~~~~a~~~la~~ 79 (379)
..|..++.++...+ .+++++.+++++|..+|.|..+|.+|+.++..+|. +++++.++.+++.++|.+..+|..++.+
T Consensus 109 ~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 109 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 188 (331)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 46788888898888 49999999999999999999999999999999999 6999999999999999999999999999
Q ss_pred HHhc--------------cCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 80 ~~~l--------------g~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
+..+ +.+++++.++.+++.++|+|..++..+..+
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9988 679999999999999999999988765444
No 173
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.90 E-value=5e-08 Score=88.90 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHH
Q 016973 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (379)
Q Consensus 3 ~~l~~~g~~~~~----~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p~~~~a~~ 74 (379)
..++..|..++. .+++++|+.+|.+++..+ ++.+++++|.+|.. .+++++|+..|.+++.++ ++.+++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 114 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCA 114 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHH
Confidence 467788899999 999999999999999885 78889999999999 999999999999998884 788999
Q ss_pred HHHHHHHh----ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 75 ~la~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
.+|.+|.. .+++++|+.+|+++++++ +......+..+.
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 156 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLY 156 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHH
Confidence 99999999 999999999999999876 444444554443
No 174
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.89 E-value=6.3e-09 Score=99.99 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----C-CCC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIEL-----E-PSM 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-----~-p~~ 69 (379)
+..+...|.++...|+|++|+..|.+++.+.+.. ..++.++|.+|..+|++++|+..+.+|+.+ + |..
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 263 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSL 263 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhH
Confidence 3467889999999999999999999999985433 358999999999999999999999999994 5 778
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
..+++.+|.+|+.+|++++|+.+|++++.+.+
T Consensus 264 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 264 PQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999854
No 175
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.89 E-value=2.6e-09 Score=100.12 Aligned_cols=102 Identities=12% Similarity=0.047 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------ 69 (379)
+..+.+.|.++...|+|++|+.+|.+++.+.+.. ..++.++|.+|.. |++++|+.+|.+|+.+.+..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3467788999999999999999999999984321 4678899999998 99999999999999997643
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
..+++++|.+|..+|+|++|+.+|++++.+.+.+.
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999876543
No 176
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=1.9e-08 Score=98.81 Aligned_cols=103 Identities=22% Similarity=0.117 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-------------------cCHHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-------------------QNFTEAVADANRAI 63 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l-------------------g~~~eAl~~~~~Al 63 (379)
..+...|..+...|++++|+..|.+++..+|++..++.++|.||... +.+++|+..+.+++
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 327 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKAD 327 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 45678899999999999999999999999999999999999888643 34678888999999
Q ss_pred HhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChH
Q 016973 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 64 ~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
.++|.+..+++.+|.+|..+|+|++|+.+|++++.+++++..
T Consensus 328 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 328 EANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp HHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred hcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 999999999999999999999999999999999999887654
No 177
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.87 E-value=4.2e-09 Score=97.78 Aligned_cols=113 Identities=10% Similarity=0.004 Sum_probs=92.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHH
Q 016973 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKA 72 (379)
Q Consensus 6 ~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~-------p~~~~a 72 (379)
...|..++..++|++|+..|.+++.+.... ..++.++|.+|..+|+|++|+..|.+|+.+. +....+
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 357888888999999999999999964432 3478999999999999999999999999642 234568
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHHHHHH
Q 016973 73 YWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (379)
Q Consensus 73 ~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~ 118 (379)
++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...++
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999986543 345555666665555
No 178
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.87 E-value=1e-08 Score=95.25 Aligned_cols=103 Identities=17% Similarity=0.014 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CC-CHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAVADANRAIELE--PS-MSKAYWRKAT 78 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~--~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~--p~-~~~a~~~la~ 78 (379)
..+..|..+++.++|++|+.+|++++...+.. ..+++++|.++..+|++++|+..|.+++... |. ...+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 45778888999999999999998776653221 3578999999999999999999999998544 44 6679999999
Q ss_pred HHHhccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 79 ACMKLEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 79 ~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
++.++|+.++|...|++++..+|+ ..+.
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 999999999999999999999998 5543
No 179
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.86 E-value=1.6e-08 Score=97.22 Aligned_cols=101 Identities=15% Similarity=0.037 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN------SAELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMS 70 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~-----l~p~~~ 70 (379)
+..+...|.+++..|+|++|+..|.+++.+.+. ...++.++|.+|..+|++++|+..+.+|+. .+|...
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 456788999999999999999999999997331 246889999999999999999999999999 677789
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
.+++.+|.+|+.+|++++|+.+|++++.+.+.
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 180
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.86 E-value=4.7e-08 Score=93.56 Aligned_cols=109 Identities=8% Similarity=0.027 Sum_probs=100.6
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc-c-CHHH
Q 016973 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL-E-EYET 88 (379)
Q Consensus 12 ~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg-~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l-g-~y~~ 88 (379)
....+..++|+.+++++|.++|.+..+|..|+.++..++ .+++++..+..++.++|.+..+|+.++.++..+ + ++++
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~ 143 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVS 143 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHH
Confidence 334445579999999999999999999999999999999 599999999999999999999999999999998 8 9999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 89 AKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 89 A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++.++.+++.++|.+..++..+..+-..++..
T Consensus 144 EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~ 175 (349)
T 3q7a_A 144 EIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTL 175 (349)
T ss_dssp HHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999888887764
No 181
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.86 E-value=3.6e-08 Score=76.12 Aligned_cols=76 Identities=16% Similarity=0.016 Sum_probs=70.2
Q ss_pred CCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 32 SPNSAELFADRAQASIKLQN---FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 32 ~p~~~~~~~~ra~~~~~lg~---~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
+|.++.++..+|.+++..++ .++|...+.+|+.++|++..+++.+|..++..|+|++|+.+|+++++.+|.++...
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~ 80 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRV 80 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Confidence 68899999999999987766 79999999999999999999999999999999999999999999999999855433
No 182
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.86 E-value=2.6e-08 Score=77.42 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
..+...|.+++..|+|++|+..|.+++..+|.+..+++.+|.++..+|++++|+..+.+++.++|.+..+++.++.+..
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999999987753
No 183
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.86 E-value=8.4e-09 Score=98.38 Aligned_cols=118 Identities=13% Similarity=0.143 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------~ 70 (379)
..+...|..++..|++++|+.+|.+++.+.+.. ..++..+|.+|..+|++++|+..+.+++.+.+.. .
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 307 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEG 307 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 367788999999999999999999999886655 6788899999999999999999999999886543 6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC------hHHHHHHHHHHHHHHhh
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIAEE 120 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~------~~~~~~l~~~~~~l~~~ 120 (379)
.+++.+|.+|..+|++++|+.+|++++++.+.. ......++.+...++..
T Consensus 308 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 308 RACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 788999999999999999999999998885432 23445555555555543
No 184
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.85 E-value=8.5e-09 Score=87.42 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYF----------ELAYDLYSQAIEISPNSAELFADRAQASIKLQ-----------NFTEAVADAN 60 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y----------~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg-----------~~~eAl~~~~ 60 (379)
++.+++.|.++...+++ ++|+..|++||+++|++..+|+++|.+|..+| +|++|+.+|.
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 56788999999998875 59999999999999999999999999999985 8999999999
Q ss_pred HHHHhCCCCH
Q 016973 61 RAIELEPSMS 70 (379)
Q Consensus 61 ~Al~l~p~~~ 70 (379)
+|+.++|++.
T Consensus 116 kAl~l~P~~~ 125 (158)
T 1zu2_A 116 QAVDEQPDNT 125 (158)
T ss_dssp HHHHHCTTCH
T ss_pred HHHHhCCCCH
Confidence 9999999875
No 185
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.84 E-value=1.1e-08 Score=98.37 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------C
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEP------S 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~-------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p------~ 68 (379)
+..+...|..++..|++..|+..|.+|+.+.+. ...++.++|.+|..+|+|++|+..|.+|+.+.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 456788899999999999999999999987442 245788899999999999999999999998743 2
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHh-----cCCCChHHHHHHHHHHHHHHhh
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~-----l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
...+++++|.+|..+|++++|+.+|++++. .+|....+...++.+...+++.
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~ 277 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQT 277 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCH
Confidence 356889999999999999999999999998 6666666666677776655543
No 186
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.84 E-value=2.4e-08 Score=100.19 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l--------~ 66 (379)
..++..+..+..+|+|++|+.+|.++|.+ .+++ ...+.++|.+|..+|+|++|+..+.+++.+ +
T Consensus 310 ~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 310 KDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34566777888999999999999999998 3444 467899999999999999999999999977 3
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc-----CCCChHHHH---HHHHHHHHHHh
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTN---LIKECEERIAE 119 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l-----~p~~~~~~~---~l~~~~~~l~~ 119 (379)
|..+..+.++|.+|..+|+|++|+..|++|+.+ .|+++.... .+..+...++.
T Consensus 390 p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 390 AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999999999999999985 678876554 44445444443
No 187
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.84 E-value=1.5e-08 Score=94.24 Aligned_cols=87 Identities=9% Similarity=-0.024 Sum_probs=76.3
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhccCHHHH
Q 016973 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETA 89 (379)
Q Consensus 12 ~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~--~~a~~~la~~~~~lg~y~~A 89 (379)
+...+++.+|+..|.+++..+|+++.+++++|.+|..+|++++|+..|.+++.++|++ ..++.++|.++..+|+.++|
T Consensus 195 l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a 274 (287)
T 3qou_A 195 LLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDAL 274 (287)
T ss_dssp HHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHH
T ss_pred HHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcH
Confidence 3333344445566677788899999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHh
Q 016973 90 KVALEKGAS 98 (379)
Q Consensus 90 ~~~~~~a~~ 98 (379)
...|++++.
T Consensus 275 ~~~~r~al~ 283 (287)
T 3qou_A 275 ASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 188
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.82 E-value=2.9e-08 Score=95.04 Aligned_cols=115 Identities=5% Similarity=-0.113 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKL-Q-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (379)
Q Consensus 3 ~~l~~~g~~~~~~g-~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l-g-~~~eAl~~~~~Al~l~p~~~~a~~~la~~ 79 (379)
..+..++.++...| .+++++.+++++|..+|.+..+|..|+.++..+ + ++++++..+.+++.++|.+..+|..++.+
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wv 168 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWL 168 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 46788999999999 599999999999999999999999999999998 8 99999999999999999999999999999
Q ss_pred HHhccCHH--------HHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 016973 80 CMKLEEYE--------TAKVALEKGASLAPGDSRFTNLIKECEERI 117 (379)
Q Consensus 80 ~~~lg~y~--------~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l 117 (379)
+.++|.++ +++.++.++++.+|.|..++..+..+...+
T Consensus 169 l~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 169 YSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 99999998 999999999999999999988887775443
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=3.2e-08 Score=87.66 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ----NFTEAVADANRAIELEPSMSKAYWRKA 77 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg----~~~eAl~~~~~Al~l~p~~~~a~~~la 77 (379)
+..++..|..++..+++++|+.+|.+++.. .++.+++++|.+|.. + ++++|+..|.+|+. +.++.+++.+|
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg 92 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLA 92 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHH
Confidence 457888999999999999999999999886 578899999999988 7 89999999999965 46789999999
Q ss_pred HHHHh----ccCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHH
Q 016973 78 TACMK----LEEYETAKVALEKGASLAPG--DSRFTNLIKECEER 116 (379)
Q Consensus 78 ~~~~~----lg~y~~A~~~~~~a~~l~p~--~~~~~~~l~~~~~~ 116 (379)
.+|+. .+++++|+.+|+++.+..+. +......+..+...
T Consensus 93 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 93 RVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 99988 88999999999999988873 35666666655443
No 190
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=3e-08 Score=80.82 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=82.8
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 31 ~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~---~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
.++.+...++.+|.+++..|+|++|+..|.+++.++|.+ ..+++.+|.+|+.+|+|++|+.+|++++.++|++..+.
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999987 89999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhh
Q 016973 108 NLIKECEERIAEE 120 (379)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (379)
..++.+...+++.
T Consensus 103 ~~~a~~~~~~~~~ 115 (148)
T 2dba_A 103 YRRSQALEKLGRL 115 (148)
T ss_dssp HHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCH
Confidence 8888887766554
No 191
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.81 E-value=3.1e-08 Score=78.25 Aligned_cols=84 Identities=10% Similarity=-0.038 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATA 79 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~--~~~a~~~la~~ 79 (379)
+..++..|.+++..|+|++|+..|.+++..+|.+..+++++|.+|..+|++++|+..|.+++.+.|. +..+...+...
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999874 44555555555
Q ss_pred HHhccC
Q 016973 80 CMKLEE 85 (379)
Q Consensus 80 ~~~lg~ 85 (379)
+..+++
T Consensus 99 l~~l~~ 104 (115)
T 2kat_A 99 LRRLAR 104 (115)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 555443
No 192
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.81 E-value=6.1e-08 Score=77.46 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~ 79 (379)
..++..|.+++..|+|++|+..|.+++..+|++ +.+++.+|.||..+|++++|+..|.+++...|++..+...+..+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 577899999999999999999999999999999 89999999999999999999999999999999998877666654
Q ss_pred HHhcc
Q 016973 80 CMKLE 84 (379)
Q Consensus 80 ~~~lg 84 (379)
....+
T Consensus 120 ~~l~~ 124 (129)
T 2xev_A 120 QSIRL 124 (129)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 44333
No 193
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.80 E-value=4.8e-09 Score=100.99 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------~ 70 (379)
..+...|..++..|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|++++|+..+.+++.+.+.. .
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 303 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEA 303 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 356677888888888888888888888876543 2377888888888888888888888888877643 6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
.+++.+|.+|..+|++++|+.+|++++.+.+
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 304 QSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 7788888888888888888888888887754
No 194
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.79 E-value=2.5e-08 Score=98.54 Aligned_cols=110 Identities=11% Similarity=0.150 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CC
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL--------EP 67 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l--------~p 67 (379)
..+..+......|+|++|+.+|.++|.+ .|++ ...+.++|.+|..+|+|++|+..+.+++.+ +|
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3444555556678999999999999997 4555 456889999999999999999999999977 34
Q ss_pred CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc-----CCCChHHHHHHHHH
Q 016973 68 SMSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKEC 113 (379)
Q Consensus 68 ~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l-----~p~~~~~~~~l~~~ 113 (379)
+.+..++++|.+|..+|+|++|+..|++|+++ .|+++........+
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 56778999999999999999999999999885 68888766554443
No 195
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.77 E-value=3.7e-08 Score=87.25 Aligned_cols=110 Identities=14% Similarity=-0.004 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC--CCHH
Q 016973 2 ATDLEKKAKEAFIDD----YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEP--SMSK 71 (379)
Q Consensus 2 A~~l~~~g~~~~~~g----~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p--~~~~ 71 (379)
+..++..|..++. + ++++|+.+|.+++. +.++.+++++|.+|.. .+++.+|+..|.+|+.+++ .++.
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 126 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVD 126 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHH
Confidence 3567788888887 6 89999999999966 4678899999999987 7899999999999998887 3589
Q ss_pred HHHHHHHHHHh----ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 72 AYWRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 72 a~~~la~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
+++.+|.+|.. .+++++|+.+|+++.++ +.+......+..+..
T Consensus 127 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 127 AQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 99999999998 88999999999999988 556666666666543
No 196
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.77 E-value=8.7e-09 Score=94.92 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~------~ 70 (379)
..+...|..++..|++++|+.+|.+++...+.. ..++..+|.++..+|++++|+..+.+++.+.+.. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 457788999999999999999999999885432 3488999999999999999999999999987654 7
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh------HHHHHHHHHHHHHHh
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~------~~~~~l~~~~~~l~~ 119 (379)
.+++.+|.++..+|++++|+.+|++++.+.+... .....++.+...+++
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 318 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGN 318 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999998865332 244445555554444
No 197
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.74 E-value=9.8e-08 Score=74.92 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS-------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~~-------p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~ 74 (379)
+..++..|..++..++|..|+..|.+|+... .....++.++|.|++++|+++.|+..+.+|+.++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4567788888888888888888888888763 223556666666666666666666666666666666666655
Q ss_pred HHH
Q 016973 75 RKA 77 (379)
Q Consensus 75 ~la 77 (379)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 198
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.74 E-value=3e-08 Score=85.45 Aligned_cols=118 Identities=8% Similarity=0.104 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPS------ 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~---~p~~----~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~------ 68 (379)
+..+...|..++..|++++|+.+|.+++.+ .+++ ..++.++|.++..+|++++|+..+.+++.+.+.
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHH
Confidence 346788999999999999999999999998 4433 567899999999999999999999999977431
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
...++..+|.++..+|++++|+.+|++++.+...... ..+...+...+...
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED-SEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHhcccch
Confidence 2446789999999999999999999999988543322 13444444444443
No 199
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.72 E-value=9.4e-08 Score=94.40 Aligned_cols=113 Identities=18% Similarity=0.127 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l--------~ 66 (379)
..+......+..+|+|++|+.+|.++|.+ .+++ ...+.++|.+|..+|+|++|+..+.+++.+ +
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 34556667788999999999999999986 3455 467899999999999999999999999977 3
Q ss_pred CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc-----CCCChHHHHHHHHHHH
Q 016973 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKECEE 115 (379)
Q Consensus 67 p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l-----~p~~~~~~~~l~~~~~ 115 (379)
|..+..++++|.+|..+|+|++|+..|++|+++ .|+++.....+..+..
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 421 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEE 421 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 445678999999999999999999999999885 7888876665444433
No 200
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.68 E-value=4.9e-08 Score=77.37 Aligned_cols=85 Identities=15% Similarity=0.171 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC-------hHHH
Q 016973 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD-------SRFT 107 (379)
Q Consensus 35 ~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~-------~~~~ 107 (379)
.+..++.+|.+++..|++++|+..|.+++.++|.++.+++.+|.+|+.+|++++|+.+|++++.+.|.+ ....
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999998876 5555
Q ss_pred HHHHHHHHHHHh
Q 016973 108 NLIKECEERIAE 119 (379)
Q Consensus 108 ~~l~~~~~~l~~ 119 (379)
..++.+...++.
T Consensus 83 ~~la~~~~~~~~ 94 (131)
T 1elr_A 83 ARIGNSYFKEEK 94 (131)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 666666555444
No 201
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.65 E-value=1.5e-07 Score=94.59 Aligned_cols=114 Identities=10% Similarity=-0.023 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC- 80 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~-~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~- 80 (379)
..++..|..+...|++++|+.+|++++..+|.++ .+|..++.++.++|++++|+..|.+|+...|.....++..+.+.
T Consensus 322 ~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~ 401 (530)
T 2ooe_A 322 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 401 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 4567788888899999999999999999999885 58888999888888899999999999888887777777766653
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
..+|++++|...|+++++..|++..++..+..+...
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 458888999999999988888888776665555443
No 202
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.64 E-value=4.6e-07 Score=71.02 Aligned_cols=86 Identities=15% Similarity=0.060 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHH
Q 016973 35 SAELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (379)
Q Consensus 35 ~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~-------p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~ 107 (379)
++.-.+.+|..++..++|..|+..|..|+.+. .....++..+|.+++++|+++.|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35567889999999999999999999999873 34678999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhh
Q 016973 108 NLIKECEERIAEE 120 (379)
Q Consensus 108 ~~l~~~~~~l~~~ 120 (379)
..+..++..+...
T Consensus 84 ~n~~~~~~~~~~~ 96 (104)
T 2v5f_A 84 GNLKYFEYIMAKE 96 (104)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhc
Confidence 7777666655543
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.63 E-value=5.1e-08 Score=90.59 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=96.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-C-HHHHHHHHHHHHh
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-M-SKAYWRKATACMK 82 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~-~-~~a~~~la~~~~~ 82 (379)
....|..+...|+|++|+++|..++...|.+. .++.+|.++++.++|++|+..|..++..... . ..+++.+|.++..
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999888 9999999999999999999999987665322 1 4589999999999
Q ss_pred ccCHHHHHHHHHHHHhcC--CC-ChHHHHHHHHHHHHHHhh
Q 016973 83 LEEYETAKVALEKGASLA--PG-DSRFTNLIKECEERIAEE 120 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l~--p~-~~~~~~~l~~~~~~l~~~ 120 (379)
+|++++|+.+|+++.... |. .......++.|...++..
T Consensus 184 LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 999999999999998654 54 445666777777766665
No 204
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.62 E-value=3.6e-07 Score=91.87 Aligned_cols=107 Identities=13% Similarity=0.077 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q 016973 3 TDLEKKAKEAFI-------DDYFE-------LAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP 67 (379)
Q Consensus 3 ~~l~~~g~~~~~-------~g~y~-------~Al~~y~~al~-~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p 67 (379)
+.|+..|..+.. .|+++ +|+..|.+|+. .+|++..+++.+|.++..+|++++|+..|++++.+.|
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p 352 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED 352 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccc
Confidence 456777777775 79987 99999999997 8999999999999999999999999999999999999
Q ss_pred CCH-HHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHH
Q 016973 68 SMS-KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (379)
Q Consensus 68 ~~~-~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~ 109 (379)
.++ .+|+.+|.++.++|++++|+..|+++++..|........
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~ 395 (530)
T 2ooe_A 353 IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVT 395 (530)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHH
T ss_pred cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHH
Confidence 885 699999999999999999999999999998876654433
No 205
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.62 E-value=3.7e-07 Score=74.03 Aligned_cols=108 Identities=9% Similarity=0.031 Sum_probs=94.4
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHhccCH
Q 016973 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTE---AVADANRAIELE-P-SMSKAYWRKATACMKLEEY 86 (379)
Q Consensus 12 ~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~e---Al~~~~~Al~l~-p-~~~~a~~~la~~~~~lg~y 86 (379)
.........+...|.+.+..++.+....+++|.|+.+..+... ++..+...+..+ | ...+++|.+|+.++++|+|
T Consensus 11 ~~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y 90 (126)
T 1nzn_A 11 LVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEY 90 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cCCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhH
Confidence 3444556677888999999888999999999999999987766 999999888877 4 5678999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 87 ETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 87 ~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
..|+.++..+++..|+|.++......++.++..
T Consensus 91 ~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 91 EKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998888887764
No 206
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.59 E-value=7.7e-07 Score=85.36 Aligned_cols=107 Identities=18% Similarity=0.111 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHH--------------------------------
Q 016973 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQAS-------------------------------- 46 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~---y~~Al~~y~~al~~~p~~~~~~~~ra~~~-------------------------------- 46 (379)
|-.++.+|..++..++ +.+|+.+|++|++++|+++.++..++.||
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 3466778888877655 48999999999999999977777555554
Q ss_pred ------------HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHH
Q 016973 47 ------------IKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 110 (379)
Q Consensus 47 ------------~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l 110 (379)
...|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|.+|+.++|..+. ..|+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t-~~~~ 349 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT-LYWI 349 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH-HHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh-HHHH
Confidence 234888999999999999986 4778888899999999999999999999999998763 3443
No 207
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.55 E-value=9.4e-07 Score=72.83 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=80.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKATACMK- 82 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~- 82 (379)
.|..++..+.+++|+.+|.++.+. .++.+++++|.+|.. .+++.+|+..|.+|... .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 677888888899999999999987 678999999999998 89999999999999887 579999999999999
Q ss_pred ---ccCHHHHHHHHHHHHhcC
Q 016973 83 ---LEEYETAKVALEKGASLA 100 (379)
Q Consensus 83 ---lg~y~~A~~~~~~a~~l~ 100 (379)
.+++++|+.+|+++.++.
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHCC
Confidence 899999999999998874
No 208
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.51 E-value=5.1e-07 Score=85.89 Aligned_cols=99 Identities=9% Similarity=0.045 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCC
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE--------PSM 69 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~--------p~~ 69 (379)
.+...|..++..|+|++|+..|.+++.+.+.. ..++.++|.++..+|++++|+..+.+++.+. |..
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 45566777777788888888887777764332 2346677777888888888888888777764 233
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
..++..+|.+++.+|++++|..+|++++.+.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 456677788888888888888888888777664
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.46 E-value=1e-06 Score=83.75 Aligned_cols=98 Identities=19% Similarity=0.218 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----CH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-----MS 70 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~--------p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~-----~~ 70 (379)
.+...|..++..|+|++|+.+|.+++... |....++.++|.++..+|++++|+..+.+++.+.+. ..
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 45778999999999999999999999974 334567888999999999999999999999999875 35
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
.+++.+|.++..+|++++|...+++++.+.+
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 6889999999999999999999999998743
No 210
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.44 E-value=1.3e-06 Score=86.96 Aligned_cols=106 Identities=12% Similarity=0.003 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHH
Q 016973 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWR 75 (379)
Q Consensus 3 ~~l~~~g~~~~~~g---~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p~~~~a~~~ 75 (379)
..++..|..++..| ++++|+.+|.++++. .++.+++++|.+|.. .+++++|+..|.+|+... ++.++++
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~ 404 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQ 404 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHH
Confidence 35566777777655 778888888888776 457788888888887 788888888888887764 5788888
Q ss_pred HHHHHHh----ccCHHHHHHHHHHHHhcCCC---ChHHHHHHHH
Q 016973 76 KATACMK----LEEYETAKVALEKGASLAPG---DSRFTNLIKE 112 (379)
Q Consensus 76 la~~~~~----lg~y~~A~~~~~~a~~l~p~---~~~~~~~l~~ 112 (379)
+|.+|+. .+++++|+.+|+++++.+|+ +..+..++..
T Consensus 405 Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~ 448 (490)
T 2xm6_A 405 LGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKK 448 (490)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHh
Confidence 8888887 78888888888888888744 5555554443
No 211
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.36 E-value=7.7e-07 Score=89.25 Aligned_cols=98 Identities=10% Similarity=0.006 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-----~p~ 68 (379)
+..+.+.|..|...|+|++|+.+|.++|.+ .+++ ...+.++|.+|..+|+|++|+..|.+|+.+ .|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 567889999999999999999999999987 4444 567899999999999999999999999976 344
Q ss_pred C---HHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 69 M---SKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 69 ~---~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
+ ....-.++.++..++.|++|...|+++.+.
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 556678999999999999999999887543
No 212
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.36 E-value=1e-05 Score=80.40 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHH
Q 016973 2 ATDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAY 73 (379)
Q Consensus 2 A~~l~~~g~~~~~----~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~----lg~~~eAl~~~~~Al~l~p~~~~a~ 73 (379)
++.++..|..++. .+++++|+.+|.+++.. .++.+++.+|.+|.. .+++++|+..|.+++..+ ++.++
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~ 114 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG--LPQAQ 114 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHH
Confidence 3456777777777 78888888888888776 467788888888887 788888888888887653 67788
Q ss_pred HHHHHHHHh----ccCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 74 WRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 74 ~~la~~~~~----lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
+++|.+|.. .+++++|+.+|+++... ++......++.+.
T Consensus 115 ~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y 157 (490)
T 2xm6_A 115 QNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAY 157 (490)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 888888877 77888888888887665 3455555555443
No 213
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.31 E-value=3.6e-06 Score=77.89 Aligned_cols=86 Identities=12% Similarity=0.093 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHh-ccCHHH
Q 016973 18 FELAYDLYSQAIEISPN--SAELFADRAQASIKL-----QNFTEAVADANRAIELEPSM-SKAYWRKATACMK-LEEYET 88 (379)
Q Consensus 18 y~~Al~~y~~al~~~p~--~~~~~~~ra~~~~~l-----g~~~eAl~~~~~Al~l~p~~-~~a~~~la~~~~~-lg~y~~ 88 (379)
...|...++++|+++|+ +..+|..+|..|.++ |+.++|..+|++|++++|+. ..+++.+|..++. .|+++.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 47889999999999999 567999999999996 99999999999999999975 9999999999988 599999
Q ss_pred HHHHHHHHHhcCCCC
Q 016973 89 AKVALEKGASLAPGD 103 (379)
Q Consensus 89 A~~~~~~a~~l~p~~ 103 (379)
|..++++++..+|..
T Consensus 259 a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 259 FDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999998874
No 214
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.31 E-value=5.2e-06 Score=82.09 Aligned_cols=107 Identities=12% Similarity=0.001 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 016973 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIKL----QNFTEAVADANRAIELEPSMSKAYWRK 76 (379)
Q Consensus 4 ~l~~~g~~~~~~g---~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~l----g~~~eAl~~~~~Al~l~p~~~~a~~~l 76 (379)
.++..|..+...| ++.+|+..|.+++...+.....++++|.+|... +++++|+..|.++. |.++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 5678889999999 999999999999999999999889999999766 79999999999998 8899999999
Q ss_pred HHH-H--HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 77 ATA-C--MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 77 a~~-~--~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
|.+ + ...+++++|+.+|+++.+.+ +......++.+..
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH
Confidence 998 4 57899999999999998654 6777777777654
No 215
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.29 E-value=3.2e-06 Score=65.03 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 016973 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~---y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~ 69 (379)
++.+...|.+++..++ .++|..+|.++|.++|+++.+++.+|..+++.|+|++|+..+.+++..+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4678889999986666 7999999999999999999999999999999999999999999999999874
No 216
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.21 E-value=5.1e-06 Score=69.65 Aligned_cols=79 Identities=10% Similarity=0.012 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDD---YFELAYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRK 76 (379)
Q Consensus 2 A~~l~~~g~~~~~~g---~y~~Al~~y~~al~~~-p-~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~l 76 (379)
.+..|+.|.++.+.+ ++.+|+.+|..++..+ | .+.+++|++|..|+++|+|++|+++++++++++|++..+...+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 356789999999988 7789999999999998 6 5689999999999999999999999999999999999887765
Q ss_pred HHHH
Q 016973 77 ATAC 80 (379)
Q Consensus 77 a~~~ 80 (379)
-.+-
T Consensus 112 ~~ie 115 (152)
T 1pc2_A 112 RLID 115 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 217
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.20 E-value=1.3e-05 Score=65.79 Aligned_cols=93 Identities=14% Similarity=0.028 Sum_probs=79.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----ccCHHHHH
Q 016973 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----LEEYETAK 90 (379)
Q Consensus 15 ~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~----lg~y~~A~ 90 (379)
.+++++|+.+|.++.+....... +|.+|...+.+++|+..|.+|... .++.+++++|.+|+. .+++++|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 46789999999999998754433 999999999999999999999987 579999999999999 89999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 91 VALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
.+|+++.+. .+......+..+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHH
Confidence 999999887 56666666666654
No 218
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.20 E-value=9.1e-06 Score=80.34 Aligned_cols=100 Identities=11% Similarity=0.016 Sum_probs=64.4
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H--HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 016973 6 EKKAKEAFID----DYFELAYDLYSQAIEISPNSAELFADRAQA-S--IKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (379)
Q Consensus 6 ~~~g~~~~~~----g~y~~Al~~y~~al~~~p~~~~~~~~ra~~-~--~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~ 78 (379)
+..|..+... +++++|+.+|.+++ |.++.+++++|.+ | ...+++++|+..|.+|+..+ ++.+++.+|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 5556665444 57777777777766 6666777777776 3 34567777777777766544 5677777777
Q ss_pred HHHhcc-----CHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 016973 79 ACMKLE-----EYETAKVALEKGASLAPGDSRFTNLIKECE 114 (379)
Q Consensus 79 ~~~~lg-----~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~ 114 (379)
+|. .| ++++|+.+|+++. +++......++.+.
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y 328 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIY 328 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHH
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHH
Confidence 666 44 6777777777666 66666555555443
No 219
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.18 E-value=1.3e-05 Score=75.40 Aligned_cols=99 Identities=11% Similarity=0.019 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----CHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP--NSAELFADRAQASIKLQNFTEAVADANRAIELEPS----MSKAYWRKA 77 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p--~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~----~~~a~~~la 77 (379)
.++..|.+++..|++++|++.|.++|..+| .+.+++..++.++.++|+++.|.+.+.++...+|+ .-.....++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 456789999999999999999999999987 78999999999999999999999999999999983 234445555
Q ss_pred HH--HHhcc--CHHHHHHHHHHHHhcCCC
Q 016973 78 TA--CMKLE--EYETAKVALEKGASLAPG 102 (379)
Q Consensus 78 ~~--~~~lg--~y~~A~~~~~~a~~l~p~ 102 (379)
.+ .+..| ++.+|...|+++....|+
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 44 66667 999999999999888886
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.15 E-value=2.1e-05 Score=63.88 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhccCHHHHHHHHHHH
Q 016973 21 AYDLYSQAIEISPNSAELFADRAQASIKLQNF---TEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALEKG 96 (379)
Q Consensus 21 Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~---~eAl~~~~~Al~l~p-~~~~a~~~la~~~~~lg~y~~A~~~~~~a 96 (379)
..+.|..-+ ...-++...++.|.|+.+..+. .+++..+...++.+| ...+.+|.+|+.++++|+|..|+.+...+
T Consensus 26 l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~l 104 (134)
T 3o48_A 26 LRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTL 104 (134)
T ss_dssp HHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 334454433 2333578899999999998654 579999999999888 45789999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHHHhh
Q 016973 97 ASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 97 ~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
+++.|+|.++......++.++...
T Consensus 105 L~~eP~N~QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 105 FEHERNNKQVGALKSMVEDKIQKE 128 (134)
T ss_dssp HTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999998888754
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.13 E-value=7.2e-05 Score=61.55 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHH
Q 016973 33 PNSAELFADRAQASIKLQNF---TEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (379)
Q Consensus 33 p~~~~~~~~ra~~~~~lg~~---~eAl~~~~~Al~l~p-~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~ 108 (379)
.-+....+++|.|+.+..+. .+++..++..+...| ...+.+|.+|+.++++|+|..|+.+...+++..|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45688999999999998764 579999999999888 46789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 016973 109 LIKECEERIAEE 120 (379)
Q Consensus 109 ~l~~~~~~l~~~ 120 (379)
....++.++...
T Consensus 116 Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 116 LKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999998888764
No 222
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.11 E-value=6.2e-06 Score=81.05 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------------
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p---------------- 67 (379)
.+...|+.++..|.|++|+.+|+++ ..|.++|.|+.++|+|++|++.+.+|. ++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcH
Confidence 5677888899999999999999876 357888899999999999998888882 22
Q ss_pred -----------CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 68 -----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 68 -----------~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
.++.-...+..+|..+|++++|+..|++++.+++.+......++-+..+
T Consensus 194 ~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 194 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 1222233344678889999999999999999999988877777665543
No 223
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.09 E-value=1.7e-05 Score=87.06 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---------------
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------------- 67 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p--------------- 67 (379)
..+...|..++..|+|++|+.+|.++ ..|.++|.||.++|+|++|++.+.+|.....
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~ 1267 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFR 1267 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHH
Confidence 35778999999999999999999996 4789999999999999999999998854332
Q ss_pred ----------CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 68 ----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 68 ----------~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
.++..+..++..|..+|.|++|+..|++++.+++.+......+..+..
T Consensus 1268 LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLya 1325 (1630)
T 1xi4_A 1268 LAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS 1325 (1630)
T ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHH
Confidence 134456677788899999999999999999999888776655555543
No 224
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.4e-05 Score=77.07 Aligned_cols=98 Identities=12% Similarity=0.079 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------------------------------------HH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------------------------------AE 37 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~----------------------------------------------~~ 37 (379)
.+...|..|+..|+|++|+.+|.+++...+.. ..
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 46667777788888877777777766542211 34
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 38 LFADRAQASIKLQNFTEAVADANRAIELE------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 38 ~~~~ra~~~~~lg~~~eAl~~~~~Al~l~------p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
++.++|.+|..+|+|.+|+..+..++... +....+++.+|.+|..+|+|.+|..+|++++.+.+
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 56678888888888888888888887662 33467888888889999999999988888887643
No 225
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.05 E-value=1.9e-05 Score=66.81 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C---
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------AELFADRAQASIKLQNFTEAVADANRAIELEP---S--- 68 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~---------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p---~--- 68 (379)
.++.+...++..|.|+.|+-+++.++....++ +.+++.+|.+++..++|..|+..|.+|+++.. .
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 36788999999999999999999988874333 34789999999999999999999999986632 1
Q ss_pred -------------------CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 016973 69 -------------------MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (379)
Q Consensus 69 -------------------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~ 113 (379)
..+..|++|.||..++++++|+..++.... .-..+.....++++
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANL 164 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHH
Confidence 126889999999999999999998775322 12334455555544
No 226
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.04 E-value=1.9e-05 Score=74.20 Aligned_cols=100 Identities=8% Similarity=-0.014 Sum_probs=83.9
Q ss_pred HHHHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----------CCCCHHHH
Q 016973 8 KAKEAFIDD--YFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIEL----------EPSMSKAY 73 (379)
Q Consensus 8 ~g~~~~~~g--~y~~Al~~y~~al~~~p~--~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l----------~p~~~~a~ 73 (379)
.|.+.+..| ++++|+..|++++...|. ....+++ |++++|++++|..+++.++.+ +|+++.++
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 344455556 999999999999888886 3455555 899999999999999987776 58899999
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 016973 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (379)
Q Consensus 74 ~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~ 112 (379)
.+++.+.+.+|+ +|.++++++..++|+++-+.....+
T Consensus 259 aN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 259 ANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 999999999998 8999999999999999976655443
No 227
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.01 E-value=5.9e-06 Score=67.10 Aligned_cols=84 Identities=14% Similarity=0.267 Sum_probs=71.5
Q ss_pred ccccccccccCCeEEEEEEeCCCC--CCceEEEEeecEEEEEEEcCCCceeeecccccccc-ccCc--ceEEEeCcEEEE
Q 016973 177 QILMHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAK--CRYEVLSTKVEI 251 (379)
Q Consensus 177 ~~~~~~W~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I-~p~~--s~~~v~~~kiei 251 (379)
+++.|.=.|+++.|+|.|.++.+. ..++.+.+.++.|.|+.+ +|.|.|.|-|+| +.+. ++|......+.|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEE
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEE
Confidence 445577889999999999999998 899999999999998865 799999999999 5554 456666679999
Q ss_pred EEeecCC-CCCCccc
Q 016973 252 RLAKAEP-IQWSSLE 265 (379)
Q Consensus 252 ~L~K~~~-~~W~~L~ 265 (379)
+|.|... +.|+.|.
T Consensus 77 tLpK~~~Ge~F~dLD 91 (134)
T 2k8q_A 77 KVAKLNKNEYFEDLD 91 (134)
T ss_dssp EEEESSTTCCCSSTT
T ss_pred EEeCCCCCCCCCCcc
Confidence 9999986 6899987
No 228
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=97.99 E-value=3.9e-05 Score=59.65 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=67.1
Q ss_pred ccccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCC-----C----------ceeeeccccccccccCcceEE
Q 016973 179 LMHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYE 243 (379)
Q Consensus 179 ~~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~----------~~~~~~~~L~~~I~p~~s~~~ 243 (379)
+.++|+++++.+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|++++.+.+
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~ 84 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAA 84 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEE
Confidence 3488999999999999999999999999999999999864321 1 135667789999999999999
Q ss_pred EeCcEEEEEEeecC
Q 016973 244 VLSTKVEIRLAKAE 257 (379)
Q Consensus 244 v~~~kiei~L~K~~ 257 (379)
..+.-+.|+|.|..
T Consensus 85 ~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 85 GRNGVLEIRIPKRP 98 (100)
T ss_dssp EETTEEEEEEEBC-
T ss_pred EeCCEEEEEEecCC
Confidence 99999999999975
No 229
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=97.89 E-value=9.2e-05 Score=57.79 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=67.8
Q ss_pred cccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCCCc----------eeeeccccccccccCcceEEEeCcEE
Q 016973 180 MHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE----------AYHFQPRLFGKIIPAKCRYEVLSTKV 249 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~----------~~~~~~~L~~~I~p~~s~~~v~~~ki 249 (379)
.++|+++++.+.|.+.++|+.+++|.|.+..+.|.|+....... .|.-.+.|-..|+++..+.+..+.-+
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~GvL 87 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVL 87 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTEE
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCEE
Confidence 38899999999999999999999999999999999986532111 36667789999999999999999999
Q ss_pred EEEEeecCC
Q 016973 250 EIRLAKAEP 258 (379)
Q Consensus 250 ei~L~K~~~ 258 (379)
.|+|.|..+
T Consensus 88 ~I~lpK~~~ 96 (102)
T 4fei_A 88 TVRFEKLRP 96 (102)
T ss_dssp EEEEEBSSC
T ss_pred EEEEEccCc
Confidence 999999764
No 230
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=4.8e-05 Score=73.35 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS------- 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~------- 68 (379)
+..+...|..++..|+|.+|+.+|.+++.. .+....++...|.+|..+|+|.+|...+.+++.+.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 214 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQT 214 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHH
Confidence 345678899999999999999999999887 2333788999999999999999999999999987532
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
....+..+|.++...|+|.+|..+|.++++.
T Consensus 215 ~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 215 VAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2467788899999999999999999999875
No 231
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.86 E-value=7.1e-05 Score=82.32 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=73.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh----------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEI----------------------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~----------------------~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
.|..+...|.|++|..+|+++-.. ..+.+.+|+++|.++...|++.+|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 366666677777666665554211 1355888999999999999999999999886
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
+++.+|++.|.++.++|+|++|+.+|..|.+..+.
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999988754
No 232
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0001 Score=57.77 Aligned_cols=86 Identities=15% Similarity=0.301 Sum_probs=72.5
Q ss_pred ccccccccccccCCeEEEEEEeCCCC--CCceEEEEeecEEEEEEEcCCCceeeeccccccccccCc---ceEEEeCcEE
Q 016973 175 RFQILMHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAK---CRYEVLSTKV 249 (379)
Q Consensus 175 ~~~~~~~~W~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~p~~---s~~~v~~~ki 249 (379)
+++.|.|.=.|+++.|+|.|.++.+. ..++.+.+.++.|.+.+. +|-|.|.|-++|.-++ ++|.+....+
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~ 88 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECI 88 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEE
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEE
Confidence 34556688899999999999999877 779999999999999876 7999999999995433 4788888899
Q ss_pred EEEEeecCC-CCCCccc
Q 016973 250 EIRLAKAEP-IQWSSLE 265 (379)
Q Consensus 250 ei~L~K~~~-~~W~~L~ 265 (379)
.|+|.|..+ +..+.|.
T Consensus 89 ~v~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 89 NVKVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEEEESSTTCCCCCTT
T ss_pred EEEEcCCcCCCcCCCcc
Confidence 999999986 5788875
No 233
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=97.74 E-value=0.00015 Score=58.64 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=67.8
Q ss_pred cccccccCCeEEEEEEeCCCCCCceEEEEee-cEEEEEEEcCCC---c--------eeeeccccccccccCcc-eEEEeC
Q 016973 180 MHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE---E--------AYHFQPRLFGKIIPAKC-RYEVLS 246 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~-~~l~v~~~~~~~---~--------~~~~~~~L~~~I~p~~s-~~~v~~ 246 (379)
.++|+++++.+.|.+.++|+.+++|.|.+.+ +.|.|+...... . .|.-.+.|-..|++++. +.+..+
T Consensus 26 ~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~~ 105 (123)
T 3aab_A 26 PVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYEN 105 (123)
T ss_dssp CEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEET
T ss_pred cEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEcC
Confidence 3889999999999999999999999999999 999999764321 1 45666789999999998 888889
Q ss_pred cEEEEEEeecCC
Q 016973 247 TKVEIRLAKAEP 258 (379)
Q Consensus 247 ~kiei~L~K~~~ 258 (379)
.-+.|+|.|...
T Consensus 106 GvL~I~lPK~~~ 117 (123)
T 3aab_A 106 GVLTIRIPIAGT 117 (123)
T ss_dssp TEEEEEEEGGGE
T ss_pred CEEEEEEEcCCC
Confidence 999999999753
No 234
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.63 E-value=8.2e-05 Score=73.24 Aligned_cols=82 Identities=10% Similarity=0.024 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-----~p~ 68 (379)
+..+.+.|..|...|+|++|+.+|.++|.+ .+++ ...++++|.+|..+|+|++|+..+.+|+.+ .|+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 567888999999999999999999999987 3444 567899999999999999999999999977 455
Q ss_pred CH---HHHHHHHHHHHhc
Q 016973 69 MS---KAYWRKATACMKL 83 (379)
Q Consensus 69 ~~---~a~~~la~~~~~l 83 (379)
++ ..+..++.+...+
T Consensus 409 Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 409 HSLIEDLILLLEECDANI 426 (429)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH
Confidence 54 3445555555443
No 235
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.56 E-value=0.00044 Score=58.56 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=67.0
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCC-----C-----------ceeeeccccccccccCcceEEE
Q 016973 181 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 244 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~-----------~~~~~~~~L~~~I~p~~s~~~v 244 (379)
++++++++.+.|.+.++|+.+++|+|.+.++.|.|+..... + ..|.-.+.|-..|++++.+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 78999999999999999999999999999999999875322 1 1355667899999999999999
Q ss_pred eCcEEEEEEeecCC
Q 016973 245 LSTKVEIRLAKAEP 258 (379)
Q Consensus 245 ~~~kiei~L~K~~~ 258 (379)
.+.-++|+|.|.+.
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 99999999999753
No 236
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.53 E-value=0.00034 Score=56.48 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFEL---AYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~---Al~~y~~al~~~-p-~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la 77 (379)
+.-|+.|.++.+..+... +|.++...+..+ | ..-++++.+|..++++|+|.+|+++++.++++.|.+..|.-.+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 466888889998888876 999999999886 4 46789999999999999999999999999999999988876655
Q ss_pred HHH
Q 016973 78 TAC 80 (379)
Q Consensus 78 ~~~ 80 (379)
.+-
T Consensus 116 ~i~ 118 (126)
T 1nzn_A 116 LID 118 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 237
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.53 E-value=0.0004 Score=54.03 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=66.0
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcC---CC-----ceeeeccccccccccCcceEEE-eCcEEEE
Q 016973 181 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 251 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei 251 (379)
.|++++++.+.|.+-++|+.++++.|.+.++.|.|+.... ++ ..|.-.+.|-..|++++.+.++ .+.-+.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 6899999999999999999999999999999999986532 11 1255677899999999999999 6889999
Q ss_pred EEeecCC
Q 016973 252 RLAKAEP 258 (379)
Q Consensus 252 ~L~K~~~ 258 (379)
+|.|...
T Consensus 84 ~lPK~~~ 90 (101)
T 2wj5_A 84 QATPASA 90 (101)
T ss_dssp EECBCCC
T ss_pred EEECCCc
Confidence 9999753
No 238
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.51 E-value=0.0009 Score=61.84 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHHHH---c--------cCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHhc-----cCHHHHHHHH
Q 016973 32 SPNSAELFADRAQASIK---L--------QNFTEAVADANRAIELEPS--MSKAYWRKATACMKL-----EEYETAKVAL 93 (379)
Q Consensus 32 ~p~~~~~~~~ra~~~~~---l--------g~~~eAl~~~~~Al~l~p~--~~~a~~~la~~~~~l-----g~y~~A~~~~ 93 (379)
+|.++++++-.|..... + +....|...+++|++++|+ +..+|..+|..|..+ |+.++|..+|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 56668888887777644 2 2357899999999999999 677999999999996 9999999999
Q ss_pred HHHHhcCCCC-hHHHHHHHH
Q 016973 94 EKGASLAPGD-SRFTNLIKE 112 (379)
Q Consensus 94 ~~a~~l~p~~-~~~~~~l~~ 112 (379)
+++++++|+. .......+.
T Consensus 228 erAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHhCCCCCchHHHHHHH
Confidence 9999999975 555444444
No 239
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.48 E-value=0.00017 Score=71.10 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----~p~~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-----~p~ 68 (379)
+..+.+.|.+|...|+|++|+.+|.++|.+ .+++ ...+.++|.+|..+|+|++|+..|.+|+.+ .|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 567889999999999999999999999987 4444 567999999999999999999999999977 456
Q ss_pred CHH
Q 016973 69 MSK 71 (379)
Q Consensus 69 ~~~ 71 (379)
++.
T Consensus 420 Hp~ 422 (433)
T 3qww_A 420 HPY 422 (433)
T ss_dssp CHH
T ss_pred ChH
Confidence 554
No 240
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.48 E-value=0.00049 Score=57.64 Aligned_cols=79 Identities=18% Similarity=0.218 Sum_probs=66.2
Q ss_pred cccccccCCeEEEEEEeCCCCCCceEEEEe-ecEEEEEEEcCC-----C----------ceeeeccccccccccCcceEE
Q 016973 180 MHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYE 243 (379)
Q Consensus 180 ~~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~-----~----------~~~~~~~~L~~~I~p~~s~~~ 243 (379)
.++|+++++.+.|.+.++|+.+++|.|.+. .+.|.|+..... + ..|.-.+.|-..|+++..+.+
T Consensus 45 ~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 124 (151)
T 1gme_A 45 RMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAG 124 (151)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEE
Confidence 388999999999999999999999999995 579999874321 1 135567789899999999999
Q ss_pred EeCcEEEEEEeecCC
Q 016973 244 VLSTKVEIRLAKAEP 258 (379)
Q Consensus 244 v~~~kiei~L~K~~~ 258 (379)
..+.-+.|+|.|...
T Consensus 125 ~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 125 LENGVLTVTVPKAEV 139 (151)
T ss_dssp EETTEEEEEEECCCC
T ss_pred EECCEEEEEEEccCc
Confidence 999999999999753
No 241
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.35 E-value=0.00056 Score=65.50 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~ 74 (379)
.+...|..++..|++++|+..+++|+.++|+ ..+|..+|.++.-.|++++|+..|.+|+.++|.....++
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 3445666778889999999999999999964 778899999999999999999999999999997764333
No 242
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.29 E-value=0.0057 Score=50.68 Aligned_cols=103 Identities=17% Similarity=-0.002 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 016973 3 TDLEKKAKEAFIDDYF------ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y------~~Al~~y~~al~~~p~~--------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~ 68 (379)
+.|+.-...+-+.|+. +.-++.|.+|+..-|-. +.+|.+.|.. ..+++.++|.+.|..|+.++..
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk 92 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK 92 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH
Confidence 3455556666666888 88889999999987753 4556666644 5679999999999999999999
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHH
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
++.+|...|.--.+.|+...|...+.+|+.+.|...+.
T Consensus 93 FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 93 FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 99999999999999999999999999999999987653
No 243
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.27 E-value=0.003 Score=51.85 Aligned_cols=78 Identities=12% Similarity=-0.014 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y---~~Al~~y~~al~~~p~-~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~ 78 (379)
+..|+.|.++.+..+- .++|.++...+...|. .-++++.+|..++++|+|.+|+++++.++++.|.+..|.-.+..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 4568888888887766 4799999999998884 56899999999999999999999999999999999887766554
Q ss_pred HH
Q 016973 79 AC 80 (379)
Q Consensus 79 ~~ 80 (379)
+-
T Consensus 120 Ie 121 (144)
T 1y8m_A 120 VE 121 (144)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 244
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.25 E-value=0.00043 Score=67.99 Aligned_cols=109 Identities=12% Similarity=0.014 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------------------CCHHHHHHHHHHHHHccCHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---------------------------NSAELFADRAQASIKLQNFTEAV 56 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p---------------------------~~~~~~~~ra~~~~~lg~~~eAl 56 (379)
.+...|.++++.|+|++|+++|.++. ++ .+++-+..+..+|.++|++++|+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai 227 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI 227 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHH
Confidence 45678999999999999999999982 22 12223334557899999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH--HhccCHHHHHHHHHHHHhcCC-----CChHHHHHHHHHH
Q 016973 57 ADANRAIELEPSMSKAYWRKATAC--MKLEEYETAKVALEKGASLAP-----GDSRFTNLIKECE 114 (379)
Q Consensus 57 ~~~~~Al~l~p~~~~a~~~la~~~--~~lg~y~~A~~~~~~a~~l~p-----~~~~~~~~l~~~~ 114 (379)
..++.++.+++....++..+|++| ++.++..+++..|...+.+.| .+..++..+.-+.
T Consensus 228 ~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly 292 (449)
T 1b89_A 228 TMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLY 292 (449)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 668888999998887766655 4554444444443
No 245
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.24 E-value=0.0024 Score=51.82 Aligned_cols=78 Identities=12% Similarity=-0.014 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y---~~Al~~y~~al~~~p~-~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~ 78 (379)
+.-|+.|.++.+..+. ..+|.++...+..+|. .-++++.+|..++++|+|.+|+++++.++++.|.+..|.-....
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 4567788888887765 4799999999999884 47899999999999999999999999999999999888766655
Q ss_pred HH
Q 016973 79 AC 80 (379)
Q Consensus 79 ~~ 80 (379)
+-
T Consensus 121 Ie 122 (134)
T 3o48_A 121 VE 122 (134)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 246
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.21 E-value=0.0013 Score=51.54 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=65.7
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcC---CC-----ceeeeccccccccccCcceEEE-eCcEEEE
Q 016973 181 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 251 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei 251 (379)
-+++++++.+.|.+-++|+.+++|.|.+..+.|.|+.... ++ ..|.-.+.|-..|++++.+.++ .+.-+.|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence 4688999999999999999999999999999999986421 11 1366677899999999999999 6889999
Q ss_pred EEeecCC
Q 016973 252 RLAKAEP 258 (379)
Q Consensus 252 ~L~K~~~ 258 (379)
+|.|...
T Consensus 85 ~~PK~~~ 91 (106)
T 3l1e_A 85 SGPKIPS 91 (106)
T ss_dssp EEEBCCC
T ss_pred EEEccCc
Confidence 9999764
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.20 E-value=0.0053 Score=59.37 Aligned_cols=95 Identities=16% Similarity=0.045 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHccCHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------AELFADRAQASIKLQNFTEAVADANR 61 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~----------------------~~~~~~ra~~~~~lg~~~eAl~~~~~ 61 (379)
.+...|......|+...|+..|.+|+.+..-. ..++..++.++..+|++.+|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45566777778899999999999999983211 23345577778889999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Q 016973 62 AIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 62 Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
++..+|.+-.+|..+-.+|++.|+..+|+..|+++.+
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998755
No 248
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.19 E-value=0.0028 Score=47.45 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=61.9
Q ss_pred cccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCC-----C---ceeeeccccccccccCcceEEEe-CcEEEEEEe
Q 016973 184 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E---EAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 254 (379)
Q Consensus 184 ~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~---~~~~~~~~L~~~I~p~~s~~~v~-~~kiei~L~ 254 (379)
+++++.+.|.+-++|+.+++|.|.+..+.|.|+..... + ..|.-.+.|-..|++++.+-++. +.-+.|+|-
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 47889999999999999999999999999999875321 1 24666788999999999999998 889999998
Q ss_pred ec
Q 016973 255 KA 256 (379)
Q Consensus 255 K~ 256 (379)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 249
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.18 E-value=0.0022 Score=66.62 Aligned_cols=57 Identities=14% Similarity=-0.048 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 016973 7 KKAKEAFIDDYFELAY-DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (379)
Q Consensus 7 ~~g~~~~~~g~y~~Al-~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al 63 (379)
..|..+...|+.++|+ ..|.+|+...|.+..+++..+..+...|++++|...|++++
T Consensus 348 ~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 348 NMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3333344444444443 44444444444444444444444444444444444444444
No 250
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.10 E-value=0.0025 Score=66.19 Aligned_cols=99 Identities=5% Similarity=-0.013 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACM 81 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~-~p~~~~~~~~ra~~~~~lg~-~~eAl~~~~~Al~l~p~~~~a~~~la~~~~ 81 (379)
.|...++...+.|+.+.|..+|.+|+.. .+....+|...|...++.++ ++.|...|+++++..|.++..+...+..+.
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 3555566677789999999999999988 44456777777777777754 899999999999999999999988999888
Q ss_pred hccCHHHHHHHHHHHHhcCCC
Q 016973 82 KLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 82 ~lg~y~~A~~~~~~a~~l~p~ 102 (379)
..|+.+.|...|++|+...|+
T Consensus 516 ~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSSS
T ss_pred hCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999998884
No 251
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.07 E-value=0.002 Score=54.42 Aligned_cols=78 Identities=18% Similarity=0.095 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCC-------------------CHHHHHHHHHHHHHccCHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPN-------------------SAELFADRAQASIKLQNFTEAV 56 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~------~p~-------------------~~~~~~~ra~~~~~lg~~~eAl 56 (379)
++.+...|+.+|..++|..|+..|.+||.+ .+. ..++.+..|.||.+++++.+|+
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 356788999999999999999999999876 111 1278899999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 57 ADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 57 ~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
..++.+ -.-...++..+-+|..|
T Consensus 143 ~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 143 AILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHhcC-CchhcCHHHHHHHHHHh
Confidence 876543 12225677777777655
No 252
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=96.93 E-value=0.0022 Score=48.62 Aligned_cols=73 Identities=10% Similarity=0.135 Sum_probs=58.2
Q ss_pred ccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcC----CC----ceeeeccccccccccCcceEEE-eCcEEEEEEee
Q 016973 185 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP----GE----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 255 (379)
Q Consensus 185 Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~----~~----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei~L~K 255 (379)
++++.+.|++.++|+.+++|.|.+.++.|.|+.... ++ ..|.-.+.|-..|++++.+.++ .+.-+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467889999999999999999999999999986531 11 1366677899999999999999 68899999998
Q ss_pred cC
Q 016973 256 AE 257 (379)
Q Consensus 256 ~~ 257 (379)
..
T Consensus 83 ~~ 84 (90)
T 2y1y_A 83 KQ 84 (90)
T ss_dssp C-
T ss_pred CC
Confidence 65
No 253
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.64 E-value=0.004 Score=53.33 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=62.4
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeecEEEEEEEcCC---C-----ceeeeccccccccccCcceEEE-eCcEEEE
Q 016973 181 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG---E-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 251 (379)
Q Consensus 181 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~---~-----~~~~~~~~L~~~I~p~~s~~~v-~~~kiei 251 (379)
.+++++++.+.|.+-++|+.+++|.|++.++.|.|+..... + ..|.-.+.|-..|++++.+-++ .+.-+.|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 57899999999999999999999999999999999864321 1 1255677899999999999999 5888999
Q ss_pred EEeecCC
Q 016973 252 RLAKAEP 258 (379)
Q Consensus 252 ~L~K~~~ 258 (379)
+|.|...
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999753
No 254
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.0081 Score=62.81 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHh--------CCCC----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 19 ELAYDLYSQAIEI--------SPNS----------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 19 ~~Al~~y~~al~~--------~p~~----------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
-+|+.++.++|.. .+.+ ..++..-+..++..|+|+-|+..+.+|+.+.|.....|++|+.+|
T Consensus 302 v~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vY 381 (754)
T 4gns_B 302 LDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCH 381 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHH
Confidence 4677777777642 2222 345566677778889999999999999999999999999999999
Q ss_pred HhccCHHHHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGA 97 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~ 97 (379)
..+|+|+.|+-.+..|.
T Consensus 382 i~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 382 IKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHTTCHHHHHHHHHHSC
T ss_pred HHhccHHHHHHHHhcCC
Confidence 99999999998877764
No 255
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.33 E-value=0.051 Score=54.06 Aligned_cols=101 Identities=11% Similarity=-0.109 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--------------------------------------
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-------------------------------------- 45 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~-------------------------------------- 45 (379)
.|+..+..+...|+.+.|...|.+|+.. |.+..+++..+..
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 4566677777788888888888888888 8775444333222
Q ss_pred --HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc-CHHHHHHHHHHHHhcCCCChHH
Q 016973 46 --SIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 46 --~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg-~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
+.+.+.++.|...|.+| ...+.....|...|...+.++ +++.|...|+.+++..|+++.+
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHH
Confidence 22345677777777777 333335566766677666666 4888888888888877777654
No 256
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.33 E-value=0.016 Score=54.21 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=67.3
Q ss_pred ccccccCC----eEEEEEEeCCCCCCceEEEEeecEEEEEEEcCC----C---ceeeeccccccccccCcceEEEe-CcE
Q 016973 181 HEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-STK 248 (379)
Q Consensus 181 ~~W~Qt~~----~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~----~---~~~~~~~~L~~~I~p~~s~~~v~-~~k 248 (379)
.|.+.+++ .+.|++-++|+.+++|.|.+..+.|+|+..... + ..|.-.+.|-..|++++.+.++. ..-
T Consensus 101 vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGV 180 (314)
T 2bol_A 101 KDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDDV 180 (314)
T ss_dssp GGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSSE
T ss_pred cceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCCE
Confidence 77889999 899999999999999999999999999875321 1 24777788999999999999999 889
Q ss_pred EEEEEeecCC
Q 016973 249 VEIRLAKAEP 258 (379)
Q Consensus 249 iei~L~K~~~ 258 (379)
+.|+|.|..+
T Consensus 181 L~I~lPK~~~ 190 (314)
T 2bol_A 181 LVIEAPVNEP 190 (314)
T ss_dssp EEEEEEBSSC
T ss_pred EEEEEeccCc
Confidence 9999999765
No 257
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.74 E-value=0.1 Score=47.38 Aligned_cols=63 Identities=24% Similarity=0.233 Sum_probs=58.5
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q 016973 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (379)
Q Consensus 9 g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~ 71 (379)
...+++.|++++|+..+...++.+|.+..+...+...+.-.|+++.|+..+..+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 356889999999999999999999999999999999999999999999999999999997643
No 258
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.62 E-value=0.15 Score=50.70 Aligned_cols=91 Identities=9% Similarity=-0.029 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg-~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~l 83 (379)
+..-+....+.++.+.|..+|.+| ...+.....|...|...+.++ +++.|...|+.++...|+.+..+...+..+..+
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~ 367 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRI 367 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 444555666788899999999999 443345677888888888777 599999999999999999998888888888999
Q ss_pred cCHHHHHHHHHHH
Q 016973 84 EEYETAKVALEKG 96 (379)
Q Consensus 84 g~y~~A~~~~~~a 96 (379)
|+.+.|...|+++
T Consensus 368 ~~~~~aR~l~er~ 380 (493)
T 2uy1_A 368 GDEENARALFKRL 380 (493)
T ss_dssp TCHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHH
Confidence 9999999999987
No 259
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.62 E-value=0.23 Score=41.99 Aligned_cols=93 Identities=11% Similarity=-0.017 Sum_probs=73.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hC---------------CCCH
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LE---------------PSMS 70 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~--l~---------------p~~~ 70 (379)
.+-.++-.|+|..|+-++ .+-+.....+..+.||.++++|..|+.+++..+. ++ |.+-
T Consensus 39 ~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 466778888888887766 3345577788899999999999999999999982 22 3344
Q ss_pred HH-HHHHHHHHHhccCHHHHHHHHHHHHhcCCCChH
Q 016973 71 KA-YWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (379)
Q Consensus 71 ~a-~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~ 105 (379)
+. +..+|.++.++|+.++|+.+|.......|=-+.
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~ 149 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSP 149 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccch
Confidence 43 455799999999999999999999888775443
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.19 E-value=0.057 Score=56.43 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADA 59 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~ 59 (379)
-|..++..+...|+|+-|+.+-++|+...|.....|+.+|.||.++|+|+.|+-.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtL 394 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAI 394 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999543
No 261
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.07 E-value=0.21 Score=48.12 Aligned_cols=93 Identities=13% Similarity=0.005 Sum_probs=75.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----CHHHH
Q 016973 7 KKAKEAFIDDYFELAYDLYSQAIEISPN------SAELFADRAQASIKLQNFTEAVADANRAIELEP---S----MSKAY 73 (379)
Q Consensus 7 ~~g~~~~~~g~y~~Al~~y~~al~~~p~------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p---~----~~~a~ 73 (379)
..|..++..|+|.+|+.++++.+..-.. -.+.+..-...|..++++.++...+..|..... . .+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6799999999999999999999886221 156778888899999999999999998876641 1 34556
Q ss_pred HHHHHHHH-hccCHHHHHHHHHHHHhc
Q 016973 74 WRKATACM-KLEEYETAKVALEKGASL 99 (379)
Q Consensus 74 ~~la~~~~-~lg~y~~A~~~~~~a~~l 99 (379)
..-|.++. ..++|..|..+|-.+++-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 66788999 899999999999988753
No 262
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.47 E-value=0.64 Score=46.19 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=80.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHh
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMK 82 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~-p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p-~~~~a~~~la~~~~~ 82 (379)
+...-..+.+.|++++|+.+|.+..... .-+...|..+-.+|.+.|++++|+..|.......- -+...|..+-.+|.+
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~ 187 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Confidence 3445567889999999999999987762 23567778888888999999999999999887652 266778888889999
Q ss_pred ccCHHHHHHHHHHHHhc--CCCChHHH
Q 016973 83 LEEYETAKVALEKGASL--APGDSRFT 107 (379)
Q Consensus 83 lg~y~~A~~~~~~a~~l--~p~~~~~~ 107 (379)
.|+.++|...|++..+. .|+...+.
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T~~ 214 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKSTFD 214 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHHHH
Confidence 99999999999987654 46554443
No 263
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.47 E-value=0.25 Score=49.11 Aligned_cols=79 Identities=10% Similarity=0.005 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 016973 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (379)
Q Consensus 38 ~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~ 116 (379)
.+.++|.+..-...+..|..+|.+|+.+.|.++..|..+|.+....|++-+|+.+|.+++......+.+...+..+-..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3455666666667788999999999999999999999999999999999999999999998776666666655555443
No 264
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.28 E-value=0.21 Score=48.60 Aligned_cols=98 Identities=5% Similarity=-0.053 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CC----HHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEIS---PNSAELFADRAQASIKLQNFTEAVADANRAIELEP--SM----SKAYW 74 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~---p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p--~~----~~a~~ 74 (379)
.+...|..+++.|+++.|+++|.++...- .+-.++++....+++..+++..+...+.+|..+.. .+ .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 35678999999999999999999988863 23367888888899999999999999999977632 12 23455
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 75 RKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
..|.++...++|..|...|..++.-..
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 678888899999999999988776543
No 265
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.01 E-value=0.22 Score=49.51 Aligned_cols=79 Identities=15% Similarity=0.076 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~ 82 (379)
-+...|+.+.-...+..|..+|.+|+.++|.+...|..+|.++...|++-+|+-+|.+++.....++.+.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 4567899888899999999999999999999999999999999999999999999999998776677777777776653
No 266
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.42 E-value=0.95 Score=38.43 Aligned_cols=88 Identities=10% Similarity=0.003 Sum_probs=61.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--------CCHHHHHH--
Q 016973 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--------SMSKAYWR-- 75 (379)
Q Consensus 6 ~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p--------~~~~a~~~-- 75 (379)
-.+-..+...|+++.|+++.... ++...|..+|...+..|+++-|..+|.++-..+. .+...+-.
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla 83 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQ 83 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHH
Confidence 34567788899999999887654 5678899999999999999999888876532211 12222222
Q ss_pred -----------HHHHHHhccCHHHHHHHHHHHHh
Q 016973 76 -----------KATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 76 -----------la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
...+++.+|++++++..|.+.-+
T Consensus 84 ~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r 117 (177)
T 3mkq_B 84 NIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGS 117 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC
T ss_pred HHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC
Confidence 24556678888888887766543
No 267
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.24 E-value=0.34 Score=46.46 Aligned_cols=61 Identities=11% Similarity=-0.003 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~ 64 (379)
.+...+..+...|++.+|+..+..++..+|-+..++..+-.+|+..|+..+|+..|.++..
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445677888999999999999999999999999999999999999999999999988754
No 268
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.03 E-value=0.36 Score=43.84 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=63.0
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHH-HHHHHHHHHHHh
Q 016973 45 ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT-NLIKECEERIAE 119 (379)
Q Consensus 45 ~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~-~~l~~~~~~l~~ 119 (379)
.+++.|.+++|+..+...++-+|.+......+.+.|+-.|+++.|...++.+.+++|...... .+...+...+..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R 81 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 81 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999877544 333444443333
No 269
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=92.57 E-value=0.66 Score=38.37 Aligned_cols=73 Identities=15% Similarity=-0.005 Sum_probs=59.7
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccC
Q 016973 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (379)
Q Consensus 12 ~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~ 85 (379)
+...++.++|.+.|+.++..+...+-+|...|....+.|++..|...+.+|+.++|.. .-++..|....+.|.
T Consensus 70 ~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~-~~~le~a~~nl~~~~ 142 (161)
T 4h7y_A 70 LKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP-LEMLEIALRNLNLQK 142 (161)
T ss_dssp HHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC-HHHHHHHHHHHHTTC
T ss_pred HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc-HHHHHHHHHhhhcCC
Confidence 3566899999999999999977778889999999999999999999999999999864 344555555555543
No 270
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.53 E-value=0.37 Score=52.97 Aligned_cols=92 Identities=10% Similarity=-0.037 Sum_probs=73.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------------CCCHHHHHHHHHHHHHccCHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS-----------------------PNSAELFADRAQASIKLQNFTEAVADANR 61 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~-----------------------p~~~~~~~~ra~~~~~lg~~~eAl~~~~~ 61 (379)
-+-+|.+++..|++++|..+|.+|.... ...+.+|+.....+.+.+.++.+++.+..
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3778999999999999999998873221 11245677788888899999999999999
Q ss_pred HHHhCCC-CH----HHHHHHHHHHHhccCHHHHHHHHHHH
Q 016973 62 AIELEPS-MS----KAYWRKATACMKLEEYETAKVALEKG 96 (379)
Q Consensus 62 Al~l~p~-~~----~a~~~la~~~~~lg~y~~A~~~~~~a 96 (379)
|+..... +. ..|.++-.++..+|+|++|..++...
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9988653 22 26788899999999999998887654
No 271
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.46 E-value=5.8 Score=33.52 Aligned_cols=65 Identities=11% Similarity=-0.053 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------------CCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----------------SPNSAE-LFADRAQASIKLQNFTEAVADANRAIE 64 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~-----------------~p~~~~-~~~~ra~~~~~lg~~~eAl~~~~~Al~ 64 (379)
...+-.+.++...++|..|+..++..|.- +|.+.+ ++..+|..+.++|+-++|+..+.+...
T Consensus 63 Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 63 TSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 45677889999999999999999999932 344444 456689999999999999999998887
Q ss_pred hCC
Q 016973 65 LEP 67 (379)
Q Consensus 65 l~p 67 (379)
..+
T Consensus 143 ~~~ 145 (242)
T 3kae_A 143 KSF 145 (242)
T ss_dssp HCC
T ss_pred Ccc
Confidence 765
No 272
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.44 E-value=2.2 Score=41.59 Aligned_cols=95 Identities=11% Similarity=0.080 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CCCC----HH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP--NS----AELFADRAQASIKLQNFTEAVADANRAIEL---EPSM----SK 71 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p--~~----~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l---~p~~----~~ 71 (379)
-...+..++..|+|.+|...+......-- .+ .+++..-...|+..+++..|...+.++... .+.. ..
T Consensus 140 ~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~ 219 (445)
T 4b4t_P 140 TKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLE 219 (445)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHH
Confidence 35678999999999999999988765411 11 577888888899999999999999887431 2222 35
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 72 AYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 72 a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
.+...|..+.+.++|.+|..+|..++..
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 6677889999999999999999988764
No 273
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.25 E-value=2.6 Score=41.71 Aligned_cols=95 Identities=11% Similarity=0.114 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhccCHHHHHHHH
Q 016973 16 DYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELE-PSMSKAYWRKATACMKLEEYETAKVAL 93 (379)
Q Consensus 16 g~y~~Al~~y~~al~~~-p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~-p~~~~a~~~la~~~~~lg~y~~A~~~~ 93 (379)
+.++.|+.+|.+..... .-+...|..+..+|.+.|++++|+..+....... .-+...|..+-.+|.+.|+.++|...|
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHH
Confidence 45788999999887762 2257778889999999999999999999988764 236777888888999999999999999
Q ss_pred HHHHhc--CCCChHHHHHH
Q 016973 94 EKGASL--APGDSRFTNLI 110 (379)
Q Consensus 94 ~~a~~l--~p~~~~~~~~l 110 (379)
.+..+. .|+...+...+
T Consensus 164 ~~M~~~G~~Pd~~ty~~Li 182 (501)
T 4g26_A 164 AHMVESEVVPEEPELAALL 182 (501)
T ss_dssp HHHHHTTCCCCHHHHHHHH
T ss_pred HHHHhcCCCCCHHHHHHHH
Confidence 987764 45555444433
No 274
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=90.71 E-value=0.78 Score=42.71 Aligned_cols=71 Identities=11% Similarity=-0.012 Sum_probs=57.2
Q ss_pred cCCeEEEEEEe-CCCCCCceEEEEeecEEEEEEEcCCCc-----------eeeeccccccccccCcceEEEeCcEEEEEE
Q 016973 186 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEE-----------AYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 253 (379)
Q Consensus 186 t~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~~-----------~~~~~~~L~~~I~p~~s~~~v~~~kiei~L 253 (379)
++..+.|.+.+ +|+.+++|.|++..+.|+|+....... .|.=.+.|-..|++++.+-+....-+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 45578888888 999999999999999999987532111 255567888999999999999998999998
Q ss_pred eec
Q 016973 254 AKA 256 (379)
Q Consensus 254 ~K~ 256 (379)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 874
No 275
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.62 E-value=1.9 Score=44.34 Aligned_cols=48 Identities=23% Similarity=0.217 Sum_probs=35.2
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 016973 10 KEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRA 62 (379)
Q Consensus 10 ~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~A 62 (379)
..++..|++++|+++.. .-.+...|..+|..+.+.++++.|+.+|.++
T Consensus 660 ~~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ehhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 34455566666666542 3356788899999999999999999988875
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.28 E-value=5.2 Score=41.06 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQA 28 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~a 28 (379)
..|...|..+...++++.|+.+|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 35678899999999999999999886
No 277
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=87.79 E-value=6.2 Score=37.81 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=58.4
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcC---CCChHHHHHH
Q 016973 40 ADRAQASIKLQNFTEAVADANRAIELEP------SMSKAYWRKATACMKLEEYETAKVALEKGASLA---PGDSRFTNLI 110 (379)
Q Consensus 40 ~~ra~~~~~lg~~~eAl~~~~~Al~l~p------~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~---p~~~~~~~~l 110 (379)
.++|..|+..|+|.+|+..+.+.+.-.. ...+++..-..+|..++++..+..+|.+|.... +.++.....+
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 3789999999999999999998887532 235677888889999999999999999887653 3455554444
Q ss_pred HHHHHHH
Q 016973 111 KECEERI 117 (379)
Q Consensus 111 ~~~~~~l 117 (379)
..|...+
T Consensus 183 ~~~~Gi~ 189 (394)
T 3txn_A 183 DLQSGIL 189 (394)
T ss_dssp HHHHHHH
T ss_pred HHHhhHH
Confidence 4444333
No 278
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.72 E-value=0.83 Score=45.43 Aligned_cols=67 Identities=15% Similarity=0.077 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh
Q 016973 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~-------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
..++..+-..|+..+.|+.|.....++. .|. ....+|.+|.++.-.++|.+|..+|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 4566677778889999999999999985 332 256788899999999999999999999999988654
No 279
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=87.60 E-value=32 Score=37.20 Aligned_cols=96 Identities=14% Similarity=0.006 Sum_probs=75.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEI----SPNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATA 79 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~----~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p-~~~~a~~~la~~ 79 (379)
+...-+.+.+.|+.++|..+|.+.-.. -.-+...|.-+-..|.+.|++++|++.|.......- -+...|..+-.+
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~g 209 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 455567899999999999999765432 233577888899999999999999999999987652 366677777778
Q ss_pred HHhccCH-HHHHHHHHHHHhcC
Q 016973 80 CMKLEEY-ETAKVALEKGASLA 100 (379)
Q Consensus 80 ~~~lg~y-~~A~~~~~~a~~l~ 100 (379)
+.+.|+. ++|...|++.....
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHcC
Confidence 8999984 78888998877654
No 280
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.23 E-value=2.9 Score=30.65 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
|-.+..+|..+-..|+|++|+.+|.++|+.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345666777777777777777777776664
No 281
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=85.99 E-value=3.1 Score=30.45 Aligned_cols=29 Identities=28% Similarity=0.213 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
-.+..+|..+-+.|+|++|+.+|.++|+.
T Consensus 12 i~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 12 RKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34566666667777777777777666654
No 282
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=81.41 E-value=6.4 Score=36.51 Aligned_cols=102 Identities=14% Similarity=0.072 Sum_probs=60.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----C----HHH--HHHHHHHHHHccCHHHHH-----HHHHHHHHh----
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN----S----AEL--FADRAQASIKLQNFTEAV-----ADANRAIEL---- 65 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~----~----~~~--~~~ra~~~~~lg~~~eAl-----~~~~~Al~l---- 65 (379)
.+..|..++..|++++|+..|..+|..-+- + .++ +...+.-|.--=..+.+. .+..+.+++
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 467899999999999999999999987431 1 111 111111111100001100 112233333
Q ss_pred -----CCCCHHHHHHHHH-HHHhccCHHHHHHHHHHHHhcCCCChHH
Q 016973 66 -----EPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 66 -----~p~~~~a~~~la~-~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
.|.....-+|.|. ..++.++|..|..+.++.+++.|....+
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a 243 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA 243 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH
Confidence 2222333344455 4588999999999999999999975543
No 283
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.83 E-value=5.5 Score=33.67 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 35 ~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
++...+.+| +++|+++.|.+.+... ++...|-++|......|+++-|..+|+++-.+
T Consensus 7 D~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 7 DPHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp CHHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred ChHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 344444443 5789999999987765 67899999999999999999999999976443
No 284
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=79.74 E-value=2.6 Score=31.15 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
..+..+|..+-..|+|++|+.+|..+|+.
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45666677777777777777777776654
No 285
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=79.72 E-value=3.3 Score=42.54 Aligned_cols=52 Identities=27% Similarity=0.173 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHH
Q 016973 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~ 87 (379)
......+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 4566777777778888888888888888888888888888888888887653
No 286
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=78.92 E-value=25 Score=32.53 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=60.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----C----HHH--HHHHHHHHH-----Hc--cCHH-HHHHHHHHHHHh-
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN----S----AEL--FADRAQASI-----KL--QNFT-EAVADANRAIEL- 65 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~----~----~~~--~~~ra~~~~-----~l--g~~~-eAl~~~~~Al~l- 65 (379)
.+..|..++..|++++|+..|..+|..-|- + .++ +...+.-|. .+ .... ...++..+.+++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 467899999999999999999999998542 2 111 111111111 11 1110 001222333333
Q ss_pred --------CCCCHHHHHHHHH-HHHhccCHHHHHHHHHHHHhcCCCCh
Q 016973 66 --------EPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPGDS 104 (379)
Q Consensus 66 --------~p~~~~a~~~la~-~~~~lg~y~~A~~~~~~a~~l~p~~~ 104 (379)
.|.+...-+|.|+ ..++.++|..|..+.++.+++.|...
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 2223333344455 45889999999999999999988633
No 287
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=78.89 E-value=8.4 Score=31.38 Aligned_cols=52 Identities=8% Similarity=-0.057 Sum_probs=28.6
Q ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 48 ~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
..|+-++--..+...+...+-.+..++.+|.+|.++|+..+|.+.+.+|-+.
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3444444333333333444445667777777777777777777666666543
No 288
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=75.90 E-value=3.8 Score=30.70 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
.+..+|..+-..|+|++|+.+|..+++
T Consensus 17 ~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 17 AVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 444555555555555555555555444
No 289
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=75.70 E-value=3.9 Score=29.91 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
.+..+|...-..|+|++|+.+|..+++
T Consensus 15 ~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 15 ELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445555555555666666666555554
No 290
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=75.64 E-value=16 Score=30.33 Aligned_cols=55 Identities=9% Similarity=-0.035 Sum_probs=26.6
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HhccCHHHHHHHHHHHHh
Q 016973 44 QASIKLQNFTEAVADANRAIELEPSM------SKAYWR-KATAC--MKLEEYETAKVALEKGAS 98 (379)
Q Consensus 44 ~~~~~lg~~~eAl~~~~~Al~l~p~~------~~a~~~-la~~~--~~lg~y~~A~~~~~~a~~ 98 (379)
..++..|+|=+|-+.++.+....+.. ..++.+ +|.++ ++.|+..-|...|.+++.
T Consensus 40 i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 40 VRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 33444455555555555544443322 333344 33333 345666666666666655
No 291
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=74.71 E-value=3.7 Score=32.20 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=8.4
Q ss_pred ccCHHHHHHHHHHHHH
Q 016973 49 LQNFTEAVADANRAIE 64 (379)
Q Consensus 49 lg~~~eAl~~~~~Al~ 64 (379)
.|+|++|+..|..|+.
T Consensus 31 ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 31 AGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 3555555555555544
No 292
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=74.39 E-value=11 Score=27.78 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 016973 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS 32 (379)
Q Consensus 3 ~~l~~~g~~~~~~g~y~~Al~~y~~al~~~ 32 (379)
+.++..|..+|+.++|.+|+.+|.++....
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 445556666666666666666666666543
No 293
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=73.12 E-value=7.9 Score=37.83 Aligned_cols=87 Identities=5% Similarity=-0.084 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHhCC--CC--------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------CCH
Q 016973 17 YFELAYDLYSQAIEISP--NS--------------AELFADRAQASIKLQNFTEAVADANRAIELEP----------SMS 70 (379)
Q Consensus 17 ~y~~Al~~y~~al~~~p--~~--------------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p----------~~~ 70 (379)
..++|...+.++...-- .+ ..+..++-.+|+++++..-|...+...-.... ...
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 45677777777777611 11 12234466789999999988887754433322 235
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHhc-CCCC
Q 016973 71 KAYWRKATACMKLEEYETAKVALEKGASL-APGD 103 (379)
Q Consensus 71 ~a~~~la~~~~~lg~y~~A~~~~~~a~~l-~p~~ 103 (379)
..+|.+|..++..++|.+|..+|..|++. .|.+
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 68899999999999999999999999998 7765
No 294
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=72.24 E-value=22 Score=27.10 Aligned_cols=44 Identities=11% Similarity=0.144 Sum_probs=18.4
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH
Q 016973 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD 58 (379)
Q Consensus 14 ~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~ 58 (379)
.....++|..+- ..|...+....+-.-|...+...|+|++|+..
T Consensus 19 G~H~HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l 62 (116)
T 2p58_C 19 GNHYHEEANCIA-EWLHLKGEEEAVQLIRLSSLMNRGDYASALQQ 62 (116)
T ss_dssp TTTCHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cchHHHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHh
Confidence 334444443332 23333333222333444445555555555543
No 295
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.99 E-value=21 Score=38.26 Aligned_cols=95 Identities=12% Similarity=0.021 Sum_probs=70.5
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-C-------------------
Q 016973 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE-P------------------- 67 (379)
Q Consensus 8 ~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~-p------------------- 67 (379)
....+...|.|+-|.+ .+..-|.++..-|-+|.||...|++++|..+|.+|-.-- .
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4566777787776543 445667787777889999999999999999998765211 0
Q ss_pred -C--CHHHHHHHHHHHHhccCHHHHHHHHHHHHhc-CCCChHH
Q 016973 68 -S--MSKAYWRKATACMKLEEYETAKVALEKGASL-APGDSRF 106 (379)
Q Consensus 68 -~--~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l-~p~~~~~ 106 (379)
. ....|+....++.+.+-|+-++.+.+.|+.. .++++..
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 0 2236777788888999999999999999975 4555543
No 296
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.30 E-value=19 Score=39.25 Aligned_cols=93 Identities=12% Similarity=0.022 Sum_probs=68.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----------------------
Q 016973 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL----------------------- 65 (379)
Q Consensus 9 g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l----------------------- 65 (379)
...++..+.|+.|.+ .+...+.++...+-+|.|++..|++++|..+|.+|-.-
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 345666777766554 33456777777788999999999999999999877311
Q ss_pred CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCC-CChH
Q 016973 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP-GDSR 105 (379)
Q Consensus 66 ~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p-~~~~ 105 (379)
....+..|+.....+.+.+.++.++.+.+.|++..+ ++..
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~ 935 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 935 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHH
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChh
Confidence 011345677777788899999999999999988765 4443
No 297
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=70.60 E-value=36 Score=31.34 Aligned_cols=27 Identities=4% Similarity=-0.239 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHhccCHHHHHHHHH
Q 016973 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (379)
Q Consensus 68 ~~~~a~~~la~~~~~lg~y~~A~~~~~ 94 (379)
.++..|..+|..|..-|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 367889999999999999999998875
No 298
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.52 E-value=7.2 Score=37.62 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 36 AELFADRAQASIKLQNFTEAVADANRAIELEP---SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p---~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
..++..+|..|+..|++++|++.|.++..... .....++....++...+++..+...+.++..+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 44678999999999999999999999887653 34678888899999999999999999999766
No 299
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.89 E-value=6 Score=29.50 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHH
Q 016973 37 ELFADRAQASIKLQNFTEAVADANRA 62 (379)
Q Consensus 37 ~~~~~ra~~~~~lg~~~eAl~~~~~A 62 (379)
-.+-+||..+.+.|+|++||.+..+|
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 34455555555566666666555443
No 300
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.61 E-value=13 Score=26.49 Aligned_cols=38 Identities=8% Similarity=0.173 Sum_probs=27.7
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 016973 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (379)
Q Consensus 74 ~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~ 111 (379)
..+|..+...|++++|..+|.+|+...|.-..+...+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45777788888888888888888888877666554443
No 301
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.96 E-value=7.2 Score=38.72 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 016973 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (379)
Q Consensus 6 ~~~g~~~~~~g~y~~Al~~y~~al~~~p~~-------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~ 68 (379)
...-..|+..+.|+.|..+..++. .|.+ ..+++..|.++.-.++|.+|.+++..|++..|.
T Consensus 235 nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 235 NLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 334567888999999999999984 4432 567888999999999999999999999988774
No 302
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.11 E-value=9.6 Score=28.39 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=9.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 016973 7 KKAKEAFIDDYFELAYDLYSQ 27 (379)
Q Consensus 7 ~~g~~~~~~g~y~~Al~~y~~ 27 (379)
.++..+...|.|++||.+..+
T Consensus 20 RrAe~ll~~gkydeAIech~k 40 (97)
T 2crb_A 20 RRADRLLAAGKYEEAISCHRK 40 (97)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHhcCCHHHHHHHHHH
Confidence 344444444444444444433
No 303
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=64.94 E-value=21 Score=38.19 Aligned_cols=79 Identities=6% Similarity=-0.086 Sum_probs=57.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--C-------------------C--CHHHHHHHHHHHHHccCHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS--P-------------------N--SAELFADRAQASIKLQNFTEAVADANR 61 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~--p-------------------~--~~~~~~~ra~~~~~lg~~~eAl~~~~~ 61 (379)
-|-+|.+++..|++++|..+|.+|-.-- + . ...+|...+.++.+.+-|+.++..+..
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~l 922 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 922 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3679999999999999999998765321 0 1 134778888889999999999999999
Q ss_pred HHHhCC-CCHH----HHHHHHHHHHhc
Q 016973 62 AIELEP-SMSK----AYWRKATACMKL 83 (379)
Q Consensus 62 Al~l~p-~~~~----a~~~la~~~~~l 83 (379)
|+.... ++.. .|.++-.+...+
T Consensus 923 AI~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 923 ADASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccCCccchHHHHHHHHHHHhhC
Confidence 998653 3433 445554444433
No 304
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=63.10 E-value=22 Score=36.12 Aligned_cols=80 Identities=14% Similarity=-0.003 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHH
Q 016973 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (379)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~ 97 (379)
..++...+.+++... .+......++...++.|++..|...|.+.-.-........|=+|.++..+|+-++|...|+++.
T Consensus 268 ~~~~~~~~~~~~~~~-~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRS-QSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhccccC-CChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 445555666554433 2233333444445566888888877765443323456777778888888888888888888776
Q ss_pred h
Q 016973 98 S 98 (379)
Q Consensus 98 ~ 98 (379)
.
T Consensus 347 ~ 347 (618)
T 1qsa_A 347 Q 347 (618)
T ss_dssp T
T ss_pred c
Confidence 4
No 305
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.81 E-value=15 Score=26.05 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=15.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 016973 7 KKAKEAFIDDYFELAYDLYSQAIEISPNS 35 (379)
Q Consensus 7 ~~g~~~~~~g~y~~Al~~y~~al~~~p~~ 35 (379)
..|..++..|++++|+.+|-+||..-|.-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 34555555555555555555555554443
No 306
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=62.32 E-value=22 Score=27.13 Aligned_cols=79 Identities=15% Similarity=-0.092 Sum_probs=36.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHH
Q 016973 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET 88 (379)
Q Consensus 9 g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~ 88 (379)
|...-.....++|..+- ..|...+....+-.-|...+...|+|++|+...+... .+..---+|.|-.++|-..+
T Consensus 13 AL~gTG~H~HqEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~ 86 (115)
T 2uwj_G 13 ALAGSGQHCHEEALCIA-EWLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAA 86 (115)
T ss_dssp HHHHHTTTCHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHH
T ss_pred HHHHccchHHHHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHH
Confidence 33333444455554432 3344444433334445555556666666554332211 23333334445555665555
Q ss_pred HHHHH
Q 016973 89 AKVAL 93 (379)
Q Consensus 89 A~~~~ 93 (379)
+...+
T Consensus 87 le~rL 91 (115)
T 2uwj_G 87 LDRRL 91 (115)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 307
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=62.14 E-value=18 Score=30.97 Aligned_cols=50 Identities=18% Similarity=0.118 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHccCHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL-----FADRAQASIKLQNFT 53 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~-----~~~ra~~~~~lg~~~ 53 (379)
-++-.|..++.+++|.+|.+.+.+|+..-|..... +..+--+-+-+|++.
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45678899999999999999999999987765322 233333344556654
No 308
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=61.92 E-value=45 Score=33.81 Aligned_cols=113 Identities=12% Similarity=-0.078 Sum_probs=70.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-H-HHHHHHH--HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-L-FADRAQA--SIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~-~-~~~ra~~--~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~ 80 (379)
+...|...+...+.+.|...|........-+.. . ...+..+ +...+...++...+..+.....+.....++.+.++
T Consensus 217 ~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Al 296 (618)
T 1qsa_A 217 MAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMAL 296 (618)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHH
Confidence 344566666777889999999887654433322 2 2222222 22223356777777776655554444555555554
Q ss_pred HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
+.|++..|..+|.+...-.........|++++...++
T Consensus 297 -r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g 333 (618)
T 1qsa_A 297 -GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG 333 (618)
T ss_dssp -HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTT
T ss_pred -HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcC
Confidence 6799999999998765543455667888888765543
No 309
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=60.27 E-value=33 Score=28.30 Aligned_cols=59 Identities=7% Similarity=-0.050 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHccCHHHHHHHHHHH
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFAD-RAQAS--IKLQNFTEAVADANRA 62 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~------~~~~~~-ra~~~--~~lg~~~eAl~~~~~A 62 (379)
.-+..|..+|..|+|=+|-+.+..+-...+.. ...+.. +|.++ .+.|+...|...+.+|
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~A 101 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTS 101 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 45778999999999999999999998876554 122333 33333 3346777666655544
No 310
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=59.85 E-value=1.1e+02 Score=28.50 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhccCHHHHHHHH
Q 016973 68 SMSKAYWRKATACMKLEEYETAKVAL 93 (379)
Q Consensus 68 ~~~~a~~~la~~~~~lg~y~~A~~~~ 93 (379)
.++..|..+|..|.+.++|.+|...|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 47889999999999999999998887
No 311
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=56.44 E-value=32 Score=23.09 Aligned_cols=49 Identities=20% Similarity=0.172 Sum_probs=24.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHhccCHHHHH
Q 016973 41 DRAQASIKLQNFTEAVADANRAIELEPSM-SKAYWRKATACMKLEEYETAK 90 (379)
Q Consensus 41 ~ra~~~~~lg~~~eAl~~~~~Al~l~p~~-~~a~~~la~~~~~lg~y~~A~ 90 (379)
..|..-.....+++|...++- +...+.. -.+-+-+...+.+.|+|++|+
T Consensus 11 e~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 11 ELALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 344444455677777765543 4455443 345556677788888888875
No 312
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=61.27 E-value=2.3 Score=43.76 Aligned_cols=53 Identities=19% Similarity=0.141 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHH
Q 016973 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 89 (379)
Q Consensus 37 ~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A 89 (379)
+..+.+|..++..|+|.-|.+.++.++..+|++..+...++.+|.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 44566777777778888888888888888888888888888888888766543
No 313
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=55.93 E-value=35 Score=24.55 Aligned_cols=28 Identities=18% Similarity=0.107 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 72 AYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 72 a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
-...+|.-|..+|+|+.|+.+|+-++..
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3456777777788888888877766653
No 314
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=55.04 E-value=1.1e+02 Score=26.68 Aligned_cols=64 Identities=17% Similarity=0.100 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHH
Q 016973 53 TEAVADANRAIEL--EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEER 116 (379)
Q Consensus 53 ~eAl~~~~~Al~l--~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~-~~~~~l~~~~~~ 116 (379)
+++...|..+... +-..+..|...|..|...|+|.+|...|+.+++..-.-. .+.......+.+
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHR 197 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 4556666665543 456788899999999999999999999999998764422 233444444444
No 315
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=54.87 E-value=46 Score=24.07 Aligned_cols=25 Identities=20% Similarity=0.008 Sum_probs=9.8
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 91 VALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
+.|..++...|+...-.....++..
T Consensus 47 e~l~~alk~e~d~~~k~~ir~K~~e 71 (83)
T 2w2u_A 47 EVLAQLVSLYRDGSTAAIYEQMINE 71 (83)
T ss_dssp HHHHHHHHHSTTSSTHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3333344445544433333344433
No 316
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=54.40 E-value=21 Score=33.63 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=12.2
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHH
Q 016973 73 YWRKATACMKLEEYETAKVALEKG 96 (379)
Q Consensus 73 ~~~la~~~~~lg~y~~A~~~~~~a 96 (379)
|..+|-++++.++|.+|+.++..+
T Consensus 299 YtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 299 YTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhhhhhcchHHHHHHHHHHH
Confidence 444444555555555555555444
No 317
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=53.67 E-value=1.1e+02 Score=26.26 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=63.5
Q ss_pred HHHHHHHHhCCC------C---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHhccCHHHHHH
Q 016973 23 DLYSQAIEISPN------S---AELFADRAQASIKLQNFTEAVADANRAIEL--EPSMSKAYWRKATACMKLEEYETAKV 91 (379)
Q Consensus 23 ~~y~~al~~~p~------~---~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l--~p~~~~a~~~la~~~~~lg~y~~A~~ 91 (379)
.++.+++...-+ + ..+|+..+.++ ..++..++...|...... +-..+..|...|..+...|+|.+|..
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 577777776322 2 23334333332 123367888888777654 46788899999999999999999999
Q ss_pred HHHHHHhcCCCCh-HHHHHHHHHHHHHHhh
Q 016973 92 ALEKGASLAPGDS-RFTNLIKECEERIAEE 120 (379)
Q Consensus 92 ~~~~a~~l~p~~~-~~~~~l~~~~~~l~~~ 120 (379)
.|+.+++..-.-. .+.......+.++...
T Consensus 137 Vy~~GI~~~A~P~~rL~~~~~~F~~R~~~~ 166 (202)
T 3esl_A 137 LLELGAENNCRPYNRLLRSLSNYEDRLREM 166 (202)
T ss_dssp HHHHHHHTTCBSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCccHHHHHHHHHHHHHHHHhc
Confidence 9999998764322 2334444455555443
No 318
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=53.49 E-value=13 Score=26.89 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
....|..+...|+|+.|+.+|+.++..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 356777888888888888888877775
No 319
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=52.81 E-value=57 Score=23.48 Aligned_cols=31 Identities=19% Similarity=0.010 Sum_probs=14.4
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 89 AKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 89 A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
|+..|..+++..|+...-.....++..-+.+
T Consensus 37 aie~l~~~lk~e~d~~~k~~ir~K~~eY~~R 67 (83)
T 2v6y_A 37 AIEVLSQIIVLYPESVARTAYEQMINEYKKR 67 (83)
T ss_dssp HHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4444445555566554433344444444433
No 320
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=52.65 E-value=40 Score=25.04 Aligned_cols=27 Identities=0% Similarity=-0.151 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 016973 6 EKKAKEAFIDDYFELAYDLYSQAIEIS 32 (379)
Q Consensus 6 ~~~g~~~~~~g~y~~Al~~y~~al~~~ 32 (379)
+..|..+|..|+|=+|-+.+..+-...
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~ 31 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKA 31 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhC
Confidence 345666666666666666666665555
No 321
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=51.68 E-value=53 Score=23.88 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=7.2
Q ss_pred HhccCHHHHHHHHHHHH
Q 016973 81 MKLEEYETAKVALEKGA 97 (379)
Q Consensus 81 ~~lg~y~~A~~~~~~a~ 97 (379)
-..|+|++|+.+|..++
T Consensus 27 D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 34444444444444433
No 322
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=51.51 E-value=32 Score=29.41 Aligned_cols=34 Identities=9% Similarity=-0.019 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCC
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 103 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~ 103 (379)
...+|.+|.+++..++|.+|..+|.+|++..|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4566777777777777777777777777776654
No 323
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=51.43 E-value=28 Score=35.56 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 68 SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 68 ~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
.-....+.+|...+..|+|.-|.+.+..++..+|+|..+...++.+.++|+.+
T Consensus 447 gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 447 GGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 35677888999999999999999999999999999999999999999999886
No 324
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=50.97 E-value=25 Score=33.76 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 20 ~Al~~y~~al~~-----~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
.++.+|.+|+.. ...+...|..+|.+|++.++|.+|+..+..|-..
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 356666666665 3444566666777777777777777766655433
No 325
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=49.83 E-value=20 Score=26.84 Aligned_cols=32 Identities=9% Similarity=0.167 Sum_probs=18.5
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhcCCCChHH
Q 016973 75 RKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~ 106 (379)
.+|..+...|+++.|+.+|.+|+...|.-..+
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~L 56 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 56 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 35566666666666666666666665554443
No 326
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=48.81 E-value=45 Score=32.77 Aligned_cols=64 Identities=20% Similarity=0.206 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC-----------CHHHHHHH
Q 016973 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS-----------MSKAYWRK 76 (379)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------g~~~eAl~~~~~Al~l~p~-----------~~~a~~~l 76 (379)
.++++.||.+|+.| .-|+..+.+++.|+.+-|. ...|+-.+
T Consensus 109 aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~all 188 (517)
T 3qnk_A 109 GEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFILEDLKKATEMLPASYGSREKGRATKGAAYALK 188 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHH
Confidence 57788888888776 1145678889999887653 24588889
Q ss_pred HHHHHhccCHHHHHHHHHHHHhc
Q 016973 77 ATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 77 a~~~~~lg~y~~A~~~~~~a~~l 99 (379)
|.+|+..++|++|..++++++..
T Consensus 189 arv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 189 SRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
No 327
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=48.15 E-value=77 Score=30.41 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 20 ~Al~~y~~al~~-----~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
.++.+|.+||.. ...+...|..+|.++++.++|.+|++.+..|-..
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 332 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhh
Confidence 356667777664 3444566667777777777777777777666544
No 328
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=47.22 E-value=52 Score=31.90 Aligned_cols=64 Identities=27% Similarity=0.107 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC-------------------
Q 016973 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS------------------- 68 (379)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------g~~~eAl~~~~~Al~l~p~------------------- 68 (379)
.++++.||.+|+.| .-|+..+.+++.|+.+-|.
T Consensus 112 gEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~ 191 (478)
T 3hdx_A 112 AQVRALRAFAYFYMVRIWGDVPLVTYSYDNGTFPSMPRTDAQTVLSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQG 191 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCCCTTCCCCCCCBCHHHHHHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCcccccCCCCCCHHHHHHHHHHHHHHHHHhCcccccCCcccccccccccccc
Confidence 57788888888876 1145678889999887552
Q ss_pred ----CHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 69 ----MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 69 ----~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
...|+-.+|.+|+.+|+|++|..++++++..
T Consensus 192 ~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 192 KLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 1357788999999999999999999988754
No 329
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=46.31 E-value=64 Score=30.39 Aligned_cols=47 Identities=19% Similarity=0.151 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 19 ELAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 19 ~~Al~~y~~al~~-----~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
..++.+|.+||.. +..+...|..+|.++++.+++.+|++....|-..
T Consensus 274 ~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 274 PPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 3488999999987 4556777888999999999999999988877655
No 330
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=45.58 E-value=72 Score=23.48 Aligned_cols=13 Identities=8% Similarity=-0.319 Sum_probs=5.2
Q ss_pred HHHHHHHHhcCCC
Q 016973 90 KVALEKGASLAPG 102 (379)
Q Consensus 90 ~~~~~~a~~l~p~ 102 (379)
+..|..+++..++
T Consensus 42 ie~l~~alk~e~~ 54 (93)
T 1wfd_A 42 IDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCC
Confidence 3333344444443
No 331
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=44.80 E-value=1.2e+02 Score=24.53 Aligned_cols=24 Identities=21% Similarity=0.337 Sum_probs=11.6
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhC
Q 016973 9 AKEAFIDDYFELAYDLYSQAIEIS 32 (379)
Q Consensus 9 g~~~~~~g~y~~Al~~y~~al~~~ 32 (379)
|..+.-.|..++.+++..+.....
T Consensus 14 AK~~ildG~v~qGveii~k~~~ss 37 (172)
T 1wy6_A 14 AKKFLLDGYIDEGVKIVLEITKSS 37 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHHHHcCCC
Confidence 444444555555555555544443
No 332
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=44.71 E-value=1e+02 Score=23.48 Aligned_cols=76 Identities=17% Similarity=0.122 Sum_probs=51.0
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 016973 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (379)
Q Consensus 39 ~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~ 118 (379)
+..+|..-.....+++|...++- +...+..-.+-+.+...+.+.|+|++|....+.. ..+++.-|++.|.-+++
T Consensus 10 LAE~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~-----c~pdlepw~ALce~rlG 83 (116)
T 2p58_C 10 LAEIALIGTGNHYHEEANCIAEW-LHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKL-----AYPDLEPWLALCEYRLG 83 (116)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTS-----CCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC-----CCchHHHHHHHHHHhcc
Confidence 44455555566778888766654 4555554455666777899999999998765432 26777788888777665
Q ss_pred hh
Q 016973 119 EE 120 (379)
Q Consensus 119 ~~ 120 (379)
-.
T Consensus 84 l~ 85 (116)
T 2p58_C 84 LG 85 (116)
T ss_dssp CH
T ss_pred cH
Confidence 43
No 333
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=44.70 E-value=78 Score=22.68 Aligned_cols=13 Identities=31% Similarity=0.322 Sum_probs=5.0
Q ss_pred ccCHHHHHHHHHH
Q 016973 83 LEEYETAKVALEK 95 (379)
Q Consensus 83 lg~y~~A~~~~~~ 95 (379)
.|+|++|+.+|..
T Consensus 26 ~g~y~eAl~~Y~~ 38 (85)
T 2v6x_A 26 ATQYEEAYTAYYN 38 (85)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 3444333333333
No 334
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=44.26 E-value=1e+02 Score=23.41 Aligned_cols=74 Identities=16% Similarity=0.056 Sum_probs=48.0
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 016973 40 ADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (379)
Q Consensus 40 ~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~ 119 (379)
..+|..-.....+++|...++- +...+..-.+-+.+...+.+.|+|++|....+.. ..+++.-|++.|.-+++-
T Consensus 10 AE~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~-----c~pdlepw~ALce~rlGl 83 (115)
T 2uwj_G 10 AELALAGSGQHCHEEALCIAEW-LERLGQDEAARLIRISSLANQGRYQEALAFAHGN-----PWPALEPWFALCEWHLGL 83 (115)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTC-----CCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC-----CCchHHHHHHHHHHhccc
Confidence 3445555556778888766644 4555554455666777889999999998644321 267777787777666543
No 335
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=43.85 E-value=89 Score=23.04 Aligned_cols=48 Identities=17% Similarity=0.347 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHH
Q 016973 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERI 117 (379)
Q Consensus 70 ~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~---~~~~~l~~~~~~l 117 (379)
+...+.-|.-+++.++|.+|...|+++..+-.+.- .+...+..|..+|
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHh
Confidence 44555666777888888888888888765533211 1224456665554
No 336
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=43.65 E-value=44 Score=32.55 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHH
Q 016973 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS--------MSKAYWRKATA 79 (379)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------g~~~eAl~~~~~Al~l~p~--------~~~a~~~la~~ 79 (379)
.++++.||.+|+.| .-|+..+.+++.|+.+-|. -..|+-.+|.+
T Consensus 110 aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarv 189 (481)
T 3jq1_A 110 GECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKI 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Confidence 57788888888876 1156678899999887653 34588889999
Q ss_pred HHhccCHHHHHHHHHHHHh
Q 016973 80 CMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 80 ~~~lg~y~~A~~~~~~a~~ 98 (379)
|+.+++|++|..+++.++.
T Consensus 190 yL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 190 YVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHTTCHHHHHHHHGGGGS
T ss_pred HHHHhHHHHHHHHHHHHHh
Confidence 9999999999999887764
No 337
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.89 E-value=2.3e+02 Score=27.02 Aligned_cols=77 Identities=10% Similarity=-0.060 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh-CC-----CCHHHHHHHHHHHHhccCHHHHHHHHHHHHh---cCCCChHHH
Q 016973 37 ELFADRAQASIKLQNFTEAVADANRAIEL-EP-----SMSKAYWRKATACMKLEEYETAKVALEKGAS---LAPGDSRFT 107 (379)
Q Consensus 37 ~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-~p-----~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~---l~p~~~~~~ 107 (379)
.+...+|..|...|++.+|...+.....- .. .-.+.++.....|...++|..|...+.++.. -.+.++.+.
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 34567889999999999999988876532 11 1256788888999999999999999998743 234455544
Q ss_pred HHHHHH
Q 016973 108 NLIKEC 113 (379)
Q Consensus 108 ~~l~~~ 113 (379)
..+..+
T Consensus 218 ~~~~~~ 223 (445)
T 4b4t_P 218 LEYYNL 223 (445)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 433333
No 338
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=41.77 E-value=1.3e+02 Score=32.73 Aligned_cols=73 Identities=5% Similarity=-0.100 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc--CCCChHHHHH
Q 016973 37 ELFADRAQASIKLQNFTEAVADANRAIEL----EPSMSKAYWRKATACMKLEEYETAKVALEKGASL--APGDSRFTNL 109 (379)
Q Consensus 37 ~~~~~ra~~~~~lg~~~eAl~~~~~Al~l----~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l--~p~~~~~~~~ 109 (379)
..|..+-.+|.+.|+.++|...|.....+ ..-+...|..+-..|.+.|+.++|...|.+..+. .|+-..+...
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 34677888899999999999999765432 2336778888999999999999999999988664 4665444333
No 339
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=41.36 E-value=1.9e+02 Score=27.81 Aligned_cols=65 Identities=11% Similarity=-0.021 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHHccC--HHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 35 SAELFADRAQASIKLQN--FTEAVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 35 ~~~~~~~ra~~~~~lg~--~~eAl~~~~~Al~l~-----p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
.+.++.++|.+-.-... ...++..|.+|+... ....-.|..+|-++++.++|.+|+.++..+-..
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 332 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhh
Confidence 35555555555433321 123555666666542 234556777899999999999999999887553
No 340
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=40.60 E-value=1.8e+02 Score=25.24 Aligned_cols=52 Identities=10% Similarity=-0.056 Sum_probs=30.5
Q ss_pred HHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q 016973 13 FIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIK-LQNFTEAVADANRAIE 64 (379)
Q Consensus 13 ~~~g~y~~Al~~y~~al~~--------~p~~~~~~~~ra~~~~~-lg~~~eAl~~~~~Al~ 64 (379)
|..|+-+.|...|+.|+.+ +|-...+.+|.+..|+. +++.++|...+..|+.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3455566677777776654 23334455555555543 4667777777766654
No 341
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=40.24 E-value=35 Score=25.54 Aligned_cols=26 Identities=12% Similarity=0.173 Sum_probs=13.0
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCC
Q 016973 42 RAQASIKLQNFTEAVADANRAIELEP 67 (379)
Q Consensus 42 ra~~~~~lg~~~eAl~~~~~Al~l~p 67 (379)
+|..+...|+++.|+.+|-+|+.+.|
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 44444444555555555555555544
No 342
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=39.87 E-value=72 Score=31.44 Aligned_cols=64 Identities=20% Similarity=0.129 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC-------------CHHHHH
Q 016973 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS-------------MSKAYW 74 (379)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------g~~~eAl~~~~~Al~l~p~-------------~~~a~~ 74 (379)
.++++.||.+|+.| .-++..+.+++.|+..-|. -..|+-
T Consensus 123 aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~a 202 (528)
T 3i4g_A 123 AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALA 202 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHH
Confidence 57788888888776 1144567888888887662 245888
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 75 RKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 75 ~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
.+|.+|+..++|++|..+++.++..
T Consensus 203 llarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 203 FLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 8999999999999999999988753
No 343
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.10 E-value=1.3e+02 Score=28.23 Aligned_cols=88 Identities=6% Similarity=-0.087 Sum_probs=60.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC-------C--------CC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------C
Q 016973 11 EAFIDDYFELAYDLYSQAIEIS-------P--------NS--AELFADRAQASIKLQNFTEAVADANRAIEL-------E 66 (379)
Q Consensus 11 ~~~~~g~y~~Al~~y~~al~~~-------p--------~~--~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-------~ 66 (379)
+.-...+.++|++.+.+..... . .. ..+....+..|+..+++.+|...++++-.. +
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 4456678999999998764331 0 01 344566788888999999999998888654 1
Q ss_pred CC-CHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Q 016973 67 PS-MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 67 p~-~~~a~~~la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
|. ....|+..+..|...++|..+...+-..+.
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 11 244555567777888999888777666665
No 344
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=38.11 E-value=1.4e+02 Score=24.23 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHH--hCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 53 TEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 53 ~eAl~~~~~Al~--l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
.++...|..... +.-..+..|...|..+...|++.+|...|+.+++..-.
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 446666666553 34567888999999999999999999999999987543
No 345
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=37.88 E-value=67 Score=31.19 Aligned_cols=61 Identities=11% Similarity=-0.066 Sum_probs=45.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC--------C--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCC
Q 016973 9 AKEAFIDDYFELAYDLYSQAIEISP--------N--SAELFADRAQASIKLQNFTEAVADANRAIEL-EPSM 69 (379)
Q Consensus 9 g~~~~~~g~y~~Al~~y~~al~~~p--------~--~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l-~p~~ 69 (379)
-..||+.++..-+-.++...=.... . -..++|.+|..+...++|.+|..++..|+.. .|..
T Consensus 183 ~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 183 NNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3678888888888777744322221 1 1567888999999999999999999999988 6643
No 346
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=37.76 E-value=20 Score=28.94 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=18.4
Q ss_pred HHHHHHHHHhcCCCHHHHHHhhhh
Q 016973 320 ALNKFFQEIYADADEDTRRAMKKS 343 (379)
Q Consensus 320 ~l~~~f~~iY~~~d~d~kram~Ks 343 (379)
.|..+|...|..+|+++|+.|++=
T Consensus 85 ~l~~~f~~~~~~~d~~~r~k~~rL 108 (144)
T 1sz9_A 85 NLFNLYKRTYLLVDNTTRTKLINM 108 (144)
T ss_dssp THHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 477788888888888888877663
No 347
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=37.63 E-value=29 Score=25.49 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 016973 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRA 62 (379)
Q Consensus 18 y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~A 62 (379)
++.|.+.++.| ..|+.-|.-|+..|++..|+.++.-+
T Consensus 29 ~~~a~~~l~mA--------~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 29 SDDEEAVVERA--------LNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp CHHHHHHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34555566664 23555566666666666666665544
No 348
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=37.46 E-value=1e+02 Score=29.68 Aligned_cols=64 Identities=11% Similarity=-0.021 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHccCHH--HHHHHHHHHHHhC-----CCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 36 AELFADRAQASIKLQNFT--EAVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 36 ~~~~~~ra~~~~~lg~~~--eAl~~~~~Al~l~-----p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
+.++.++|.+-...-... .++..|.+|+... ....-.|..+|-+|++.++|.+|+.++..+-..
T Consensus 277 PmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 277 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 455555555443332111 2566666666542 234455677888999999999999999877553
No 349
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=37.28 E-value=30 Score=25.36 Aligned_cols=25 Identities=4% Similarity=-0.052 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHH
Q 016973 1 MATDLEKKAKEAFIDDYFELAYDLY 25 (379)
Q Consensus 1 ~A~~l~~~g~~~~~~g~y~~Al~~y 25 (379)
||..++..|..++..|++..|+.++
T Consensus 34 mA~~Y~~Da~~fl~kGD~v~Ala~i 58 (86)
T 2oo2_A 34 NIEAYISDSRYFLEKGDLVRAFECV 58 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3555566666666666666666554
No 350
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=36.62 E-value=45 Score=25.87 Aligned_cols=11 Identities=27% Similarity=0.305 Sum_probs=5.6
Q ss_pred HHHHHHHHHHH
Q 016973 53 TEAVADANRAI 63 (379)
Q Consensus 53 ~eAl~~~~~Al 63 (379)
+.|+..+.+|+
T Consensus 16 ~kAi~lv~~Av 26 (117)
T 2cpt_A 16 QKAIDLASKAA 26 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555554
No 351
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.38 E-value=54 Score=25.45 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCC
Q 016973 51 NFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (379)
Q Consensus 51 ~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p 101 (379)
.|++|..+..+||.++-. |.-...+..|.+++..|.+++.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 366777777777766641 2222233334445555666666654
No 352
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=34.52 E-value=2.6e+02 Score=25.17 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=68.5
Q ss_pred HHHHHHHHHHcCCHHHHHHH-------HHHHHHhCCC----CHHHHHHHHHHH-----------HHccC-------HHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDL-------YSQAIEISPN----SAELFADRAQAS-----------IKLQN-------FTEA 55 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~-------y~~al~~~p~----~~~~~~~ra~~~-----------~~lg~-------~~eA 55 (379)
++......+..|+.++.+.+ +++.|+.... +..+|.-.|.++ ++.+. |+.|
T Consensus 25 ly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede~~V~eFFDaA 104 (346)
T 3qtm_A 25 LYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEESYIDAA 104 (346)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHH
T ss_pred HHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCchhhhHHHHHHHH
Confidence 46677888899999888776 5566664331 234444444444 12111 4566
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 56 l~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
++-++..+...|++....+.++.++++.-+.--+...-..-+..-|-...+..++.++.+-+...
T Consensus 105 LERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~~L 169 (346)
T 3qtm_A 105 IERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLRPL 169 (346)
T ss_dssp HHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHH
Confidence 66666666778888888888888887764444333333333333344455566666665555544
No 353
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=33.18 E-value=77 Score=30.43 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Q 016973 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 52 ~~eAl~~~~~Al~l~p~--------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
|+..+.+++.|+.+-|. ...|+-.+|.+|+.+|+|++|..+.+.++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45678899999887653 356888899999999999999999988874
No 354
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=33.13 E-value=0.11 Score=51.43 Aligned_cols=98 Identities=17% Similarity=0.270 Sum_probs=68.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC---- 80 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~---- 80 (379)
+-..|+.+|..|.|+.|.-+|+.+ ++ |.++|.|+.++|+|++|+..+++| ++.+.|-....+|
T Consensus 147 iq~VGDrcf~e~lYeAAKilys~i----sN----~akLAstLV~L~~yq~AVdaArKA-----ns~ktWKeV~~ACvd~~ 213 (624)
T 3lvg_A 147 IQQVGDRCYDEKMYDAAKLLYNNV----SN----FGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGK 213 (624)
T ss_dssp THHHHHHHHHSCCSTTSSTTGGGS----CC----CTTTSSSSSSCSGGGSSTTTTTTC-----CSSCSHHHHTHHHHHSC
T ss_pred HHHHHHHHHHccCHHHHHHHHHhC----cc----HHHHHHHHHHHHHHHHHHHHHHhc-----CChhHHHHHHHHHhCch
Confidence 356799999999999999999542 33 577999999999999999888776 3333332222222
Q ss_pred --------------------------HhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 016973 81 --------------------------MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (379)
Q Consensus 81 --------------------------~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~ 115 (379)
...|.|++-+..++.++.+...+-..-..++-+..
T Consensus 214 EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYs 274 (624)
T 3lvg_A 214 EFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS 274 (624)
T ss_dssp TTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 24666777777888888776666655555554443
No 355
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=33.08 E-value=1.7e+02 Score=28.35 Aligned_cols=63 Identities=16% Similarity=0.049 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHc------------------------cCHHHHHHHHHHHHHhCCC----------CHHHHHHHHHHHH
Q 016973 36 AELFADRAQASIKL------------------------QNFTEAVADANRAIELEPS----------MSKAYWRKATACM 81 (379)
Q Consensus 36 ~~~~~~ra~~~~~l------------------------g~~~eAl~~~~~Al~l~p~----------~~~a~~~la~~~~ 81 (379)
.++++.||.+|+.| .-|+..+++++.|+..-|. ...|+-.+|.+|+
T Consensus 129 gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL 208 (527)
T 3ckc_A 129 AEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYL 208 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHH
Confidence 57788899998877 1145678899988876552 2557777888887
Q ss_pred hc------cCHHHHHHHHHHHHh
Q 016973 82 KL------EEYETAKVALEKGAS 98 (379)
Q Consensus 82 ~l------g~y~~A~~~~~~a~~ 98 (379)
.. ++|++|..++++++.
T Consensus 209 ~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 209 NAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp THHHHHSSCCHHHHHHHHHHHHT
T ss_pred hhhhccCchhHHHHHHHHHHHHh
Confidence 65 899999999999885
No 356
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=32.63 E-value=53 Score=26.53 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
|..++..|..|...|+++.|.-+|-+.+.+
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 567888899999999999999888886554
No 357
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.55 E-value=85 Score=30.21 Aligned_cols=47 Identities=21% Similarity=0.196 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Q 016973 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (379)
Q Consensus 52 ~~eAl~~~~~Al~l~p~--------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~ 98 (379)
|+..+.+++.|+.+-|. -..|+-.+|.+|+.+|+|++|..+...++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 35678899999887653 356888899999999999999999988875
No 358
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=30.42 E-value=68 Score=28.13 Aligned_cols=14 Identities=14% Similarity=0.026 Sum_probs=6.0
Q ss_pred ccCHHHHHHHHHHH
Q 016973 83 LEEYETAKVALEKG 96 (379)
Q Consensus 83 lg~y~~A~~~~~~a 96 (379)
+++.++|....+++
T Consensus 186 l~~~~~A~~lAk~a 199 (234)
T 2br9_A 186 LNSPDRACRLAKAA 199 (234)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 44444444433333
No 359
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=30.39 E-value=68 Score=31.11 Aligned_cols=64 Identities=17% Similarity=0.004 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHH-HHHHHHHHHHHh-CC--------CCHHHHHHHH
Q 016973 36 AELFADRAQASIKL----------------------------QNFT-EAVADANRAIEL-EP--------SMSKAYWRKA 77 (379)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------g~~~-eAl~~~~~Al~l-~p--------~~~~a~~~la 77 (379)
.++++.||.+|+.| .-|+ ..+.+++.|+.. -| +...|+-.+|
T Consensus 116 aEa~flRA~~Yf~L~~~~G~VPl~~~~~~~~~~~~~~r~~~~evy~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~alla 195 (482)
T 3otn_A 116 AEVKFMRALYYFYLVRIFGDVPKITTVQSELGELQVSRAPVKEIYDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLA 195 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCGGGCSCSSCCCBCHHHHHHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcceeCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHH
Confidence 57788888888776 1155 577789999887 44 2356888899
Q ss_pred HHHHhcc---------CHHHHHHHHHHHHhc
Q 016973 78 TACMKLE---------EYETAKVALEKGASL 99 (379)
Q Consensus 78 ~~~~~lg---------~y~~A~~~~~~a~~l 99 (379)
.+|+.++ +|++|..++.+++..
T Consensus 196 rvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 196 DVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 9998888 899999999888753
No 360
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=29.70 E-value=1.1e+02 Score=29.74 Aligned_cols=48 Identities=23% Similarity=0.326 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 52 FTEAVADANRAIELEPS-----------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 52 ~~eAl~~~~~Al~l~p~-----------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
|+..+.++..|+.+-|. ...|+-.+|.+|+.+|+|++|..+..+++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34568888888887653 2458888999999999999999999998865
No 361
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=28.27 E-value=12 Score=33.44 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 016973 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (379)
Q Consensus 4 ~l~~~g~~~~~~g~y~~Al~~y~~al~~ 31 (379)
.+..+|..+-..|+|++|+.+|..+++.
T Consensus 25 ~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 25 TVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444555555555555555555555543
No 362
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=27.81 E-value=79 Score=24.64 Aligned_cols=53 Identities=15% Similarity=0.367 Sum_probs=39.0
Q ss_pred cccccCCeEEEEEEeCCCCCCceEEEEeec-EEEEEEEcCCC-ceeeecc-ccccc
Q 016973 182 EFYQKPEEVVVTVFAKGIPAKNVTVDFGEQ-ILSVSIDVPGE-EAYHFQP-RLFGK 234 (379)
Q Consensus 182 ~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~-~l~v~~~~~~~-~~~~~~~-~L~~~ 234 (379)
+=.|.++.|.++|.+.|.....+.++|... .++|.+...+| .-|.++- +.|-.
T Consensus 12 ~~~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 12 DAIQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp EEEECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred eeccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 344677889999999999999999999874 56888876444 3465554 56655
No 363
>3may_A RV0203, possible exported protein; helical protein, heme-binding protein; 2.50A {Mycobacterium tuberculosis}
Probab=27.44 E-value=38 Score=25.57 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHhhhhhhccCCee
Q 016973 320 ALNKFFQEIYADADEDTRRAMKKSFVESNGTV 351 (379)
Q Consensus 320 ~l~~~f~~iY~~~d~d~kram~Ks~~eS~gt~ 351 (379)
++|.||-.|+.....+..|+=+|+|.+.|=.|
T Consensus 31 ~vN~~~T~~~~q~p~~q~~a~v~~Yf~aNPqv 62 (101)
T 3may_A 31 ETNQVMTAVLQQQVGPGSVASLKAHFEANPKV 62 (101)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHccCChHHHHHHHHHHHHhCcHH
Confidence 58999999999988899999999999887443
No 364
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=27.40 E-value=31 Score=28.39 Aligned_cols=23 Identities=9% Similarity=0.421 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHhhh
Q 016973 320 ALNKFFQEIYADADEDTRRAMKK 342 (379)
Q Consensus 320 ~l~~~f~~iY~~~d~d~kram~K 342 (379)
-+-.||..+|..+++|+|+.|.|
T Consensus 100 ~i~~l~~~~~~~~~~~~k~Ki~k 122 (157)
T 3clj_A 100 VIQELLSDAIAKSNQDHKEKIRM 122 (157)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 35678899999999999998866
No 365
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=27.22 E-value=2.6e+02 Score=22.90 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHH--hCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCC
Q 016973 53 TEAVADANRAIE--LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (379)
Q Consensus 53 ~eAl~~~~~Al~--l~p~~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~ 102 (379)
..+...|..+.. +.-..+..|...|..+...|+|.+|...|+.+++..-.
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 345566665554 34578889999999999999999999999999997643
No 366
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=26.91 E-value=84 Score=28.03 Aligned_cols=13 Identities=15% Similarity=0.059 Sum_probs=5.5
Q ss_pred ccCHHHHHHHHHH
Q 016973 83 LEEYETAKVALEK 95 (379)
Q Consensus 83 lg~y~~A~~~~~~ 95 (379)
+++.++|....++
T Consensus 191 ln~~~~Ac~lAk~ 203 (260)
T 1o9d_A 191 LNSPDRACNLAKQ 203 (260)
T ss_dssp SCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 4444444443333
No 367
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=26.57 E-value=80 Score=23.98 Aligned_cols=29 Identities=24% Similarity=0.025 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
|+.++..|..+.+.|+|++|..++.++-+
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45666777888888888888888877643
No 368
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=26.55 E-value=3.5e+02 Score=30.07 Aligned_cols=42 Identities=10% Similarity=-0.012 Sum_probs=28.9
Q ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCHHHHH
Q 016973 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (379)
Q Consensus 48 ~lg~~~eAl~~~~~Al~l~p~~~~a~~~la~~~~~lg~y~~A~ 90 (379)
.+++|..|++.+.++++-.+ ..+.+-.++.++..+|.-.-+.
T Consensus 1296 ~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l~w~h~~~ 1337 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGALGHEHIRT 1337 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHcCCHHHHH
Confidence 46788888888888877665 4466666677777776655444
No 369
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=25.87 E-value=84 Score=23.75 Aligned_cols=29 Identities=21% Similarity=0.090 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
|+.++..|..+.+.|+|++|..++.++-+
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45667778888888888888888877643
No 370
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=25.62 E-value=95 Score=29.97 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHhccCHHHHHHHHHHHHhc
Q 016973 52 FTEAVADANRAIELEPS--------MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (379)
Q Consensus 52 ~~eAl~~~~~Al~l~p~--------~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l 99 (379)
|+..+.+++.|+.+-|. -..|+-.+|.+|+.+|+|++|..+.+.++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 45678888888877653 3568888999999999999999999988764
No 371
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.41 E-value=93 Score=24.10 Aligned_cols=47 Identities=11% Similarity=0.236 Sum_probs=29.1
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 016973 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (379)
Q Consensus 14 ~~g~y~~Al~~y~~al~~~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~ 68 (379)
....|..|..+.+++|.++.. +.-...+..|.++|..+.+++.+...
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 345678888888888887641 22222233366666677777776654
No 372
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=25.28 E-value=1.6e+02 Score=28.07 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 18 FELAYDLYSQAIEISPN--------SAELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 18 y~~Al~~y~~al~~~p~--------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
|+.-+..++.|+..-|. ...++..+|.+|+-+++|++|+..+..++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 34455556666665443 2567778899999999999999999998853
No 373
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=24.77 E-value=2.8e+02 Score=22.41 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=38.2
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 016973 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (379)
Q Consensus 21 Al~~y~~al~~--~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~~ 69 (379)
+..+|..+... .-..+.+|...|..+...|++.+|...|..+++.+..-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 55555555443 33458889999999999999999999999999987543
No 374
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=24.73 E-value=99 Score=27.35 Aligned_cols=14 Identities=14% Similarity=-0.073 Sum_probs=6.6
Q ss_pred ccCHHHHHHHHHHH
Q 016973 83 LEEYETAKVALEKG 96 (379)
Q Consensus 83 lg~y~~A~~~~~~a 96 (379)
+++.+.|....++|
T Consensus 187 ln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 187 QNAPEQACHLAKTA 200 (248)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 45555544444433
No 375
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=24.55 E-value=1.5e+02 Score=26.31 Aligned_cols=44 Identities=20% Similarity=0.177 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHh----CCCCHH---HHHHHHHHHHH-ccCHHHHHHHHHHHH
Q 016973 20 LAYDLYSQAIEI----SPNSAE---LFADRAQASIK-LQNFTEAVADANRAI 63 (379)
Q Consensus 20 ~Al~~y~~al~~----~p~~~~---~~~~ra~~~~~-lg~~~eAl~~~~~Al 63 (379)
.|...|++|+.+ .|.++. +.++.+..|+. +++.++|+..+..|+
T Consensus 174 ~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 174 DALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 445555555542 333332 22333333333 455555555554444
No 376
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=24.52 E-value=2.9e+02 Score=22.58 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=38.1
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 016973 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (379)
Q Consensus 21 Al~~y~~al~~--~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~ 68 (379)
+..+|..+... .-..+.+|...|..+...|++.+|...|..++.....
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 55555555543 3445889999999999999999999999999998753
No 377
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=24.51 E-value=91 Score=23.83 Aligned_cols=29 Identities=17% Similarity=0.035 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
|+.++..|..+.+.|+|++|.+++.++-+
T Consensus 22 Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~ 50 (109)
T 3k1s_A 22 ARSFAMEALQFAKQGKMAEADEAMVKAKE 50 (109)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667778888888999988888877643
No 378
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=24.25 E-value=1e+02 Score=27.49 Aligned_cols=13 Identities=23% Similarity=0.028 Sum_probs=5.7
Q ss_pred cCHHHHHHHHHHH
Q 016973 50 QNFTEAVADANRA 62 (379)
Q Consensus 50 g~~~eAl~~~~~A 62 (379)
++.++|...+..|
T Consensus 213 n~p~~Ac~LAk~A 225 (261)
T 3ubw_A 213 NSPDRACRLAKAA 225 (261)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4444444444433
No 379
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.94 E-value=1.8e+02 Score=21.38 Aligned_cols=57 Identities=11% Similarity=-0.030 Sum_probs=41.4
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC----CHHHHHHHHHHHH--hccCHHHHHHHHHHHHh
Q 016973 40 ADRAQASIKLQNFTEAVADANRAIELEPS----MSKAYWRKATACM--KLEEYETAKVALEKGAS 98 (379)
Q Consensus 40 ~~ra~~~~~lg~~~eAl~~~~~Al~l~p~----~~~a~~~la~~~~--~lg~y~~A~~~~~~a~~ 98 (379)
+..|..++..|+|=+|-+.++.+-...+. ....+.+++.+++ +.|+. |...|.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 44677778889999999999999988853 2345555655554 45666 7778888766
No 380
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=23.73 E-value=1.5e+02 Score=28.85 Aligned_cols=63 Identities=22% Similarity=0.045 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHc-------------------------cCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHH
Q 016973 36 AELFADRAQASIKL-------------------------QNFTEAVADANRAIELEPS---------MSKAYWRKATACM 81 (379)
Q Consensus 36 ~~~~~~ra~~~~~l-------------------------g~~~eAl~~~~~Al~l~p~---------~~~a~~~la~~~~ 81 (379)
.++++.||.+|+.| .-|+.-+.+++.|+..-|. -..|+-.+|.+|+
T Consensus 120 aEa~flRA~~Yf~L~~~~G~VP~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL 199 (499)
T 3jys_A 120 AQARFNRAFAYYVLMDMFALPPFITEKNYSIEPAPLSREDLFNWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYL 199 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCBCCCTTSCCSSCCBCCHHHHHHHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceecccCCCCCCCcCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 57788899998876 1145678888888876553 2346677777776
Q ss_pred ------hccCHHHHHHHHHHHHh
Q 016973 82 ------KLEEYETAKVALEKGAS 98 (379)
Q Consensus 82 ------~lg~y~~A~~~~~~a~~ 98 (379)
..++|++|+.++++++.
T Consensus 200 ~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 200 NAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp THHHHHSSCCHHHHHHHHHHHHH
T ss_pred hhhhccChhHHHHHHHHHHHHHh
Confidence 57899999999998874
No 381
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=23.60 E-value=3.6e+02 Score=23.29 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 016973 20 LAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (379)
Q Consensus 20 ~Al~~y~~al~~--~p~~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~p~ 68 (379)
.+..+|..+... .-..+.+|...|..+...|+|.+|...|..++.....
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 455555555543 3345888999999999999999999999999998754
No 382
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=23.45 E-value=96 Score=24.15 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 016973 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE 30 (379)
Q Consensus 2 A~~l~~~g~~~~~~g~y~~Al~~y~~al~ 30 (379)
|+.++..|..+.+.|+|++|..++.++-+
T Consensus 37 ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e 65 (120)
T 3l8r_A 37 ARSIVHEAFDAMREKNYILAEQKLQEAND 65 (120)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45566777778888888888888777633
No 383
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=21.99 E-value=1.9e+02 Score=27.65 Aligned_cols=47 Identities=13% Similarity=0.054 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 016973 19 ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIEL 65 (379)
Q Consensus 19 ~~Al~~y~~al~~~p~~--------~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l 65 (379)
+.-+..++.|+..-|.. ..++..+|.+|+-+|+|++|+..+..++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44455566666654432 567778888999999999999999998853
No 384
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=27.32 E-value=19 Score=36.89 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 016973 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (379)
Q Consensus 69 ~~~a~~~la~~~~~lg~y~~A~~~~~~a~~l~p~~~~~~~~l~~~~~~l~~~ 120 (379)
-....+.+|..++..|+|.-|...+..++..+|+|..+...++.+.++|+.+
T Consensus 460 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 460 GADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 4567788899999999999999999999999999999999999999998887
No 385
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=21.73 E-value=1.9e+02 Score=29.36 Aligned_cols=32 Identities=9% Similarity=0.036 Sum_probs=23.2
Q ss_pred HHHHHHHHHH--HhccCHHHHHHHHHHHHhcCCCC
Q 016973 71 KAYWRKATAC--MKLEEYETAKVALEKGASLAPGD 103 (379)
Q Consensus 71 ~a~~~la~~~--~~lg~y~~A~~~~~~a~~l~p~~ 103 (379)
..++.+..++ ++.|+|+.|+..+++ +.+-|-+
T Consensus 537 ~lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 537 MLLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 3455556555 899999999999987 5566755
No 386
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=21.62 E-value=1.1e+02 Score=26.78 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HccCHHHHHHHHHHH
Q 016973 19 ELAYDLYSQAIEI-----SPNSAE---LFADRAQASI-KLQNFTEAVADANRA 62 (379)
Q Consensus 19 ~~Al~~y~~al~~-----~p~~~~---~~~~ra~~~~-~lg~~~eAl~~~~~A 62 (379)
+.|...|+.|+.+ .|.+|. +.++.+..|+ -+++.++|...+..|
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~A 202 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTT 202 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3455555555442 344432 2333344433 235555555544444
No 387
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=21.38 E-value=2.1e+02 Score=27.71 Aligned_cols=48 Identities=10% Similarity=0.229 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 016973 19 ELAYDLYSQAIEISPN-----------SAELFADRAQASIKLQNFTEAVADANRAIELE 66 (379)
Q Consensus 19 ~~Al~~y~~al~~~p~-----------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~ 66 (379)
+.-+..++.|+..-|. ...++..+|.+|+-+++|++|+..+..++...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 3444455555554432 24677889999999999999999999998753
No 388
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=21.17 E-value=32 Score=24.90 Aligned_cols=22 Identities=32% Similarity=0.362 Sum_probs=18.6
Q ss_pred CCHHHHHHhhhhhhccCCeeee
Q 016973 332 ADEDTRRAMKKSFVESNGTVLS 353 (379)
Q Consensus 332 ~d~d~kram~Ks~~eS~gt~ls 353 (379)
-|+|-||||-=|..||+|...|
T Consensus 11 eDeDLkrAieLSL~Es~~~~~~ 32 (81)
T 1q0v_A 11 EEELIRKAIELSLKESRNSASS 32 (81)
T ss_dssp HHHHHHHHHHHHHHCCCCCSCC
T ss_pred chHHHHHHHHHhHHHHcCCCCC
Confidence 3678999999999999988543
No 389
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=20.28 E-value=2e+02 Score=19.21 Aligned_cols=51 Identities=12% Similarity=0.013 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHccCHHHHH
Q 016973 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAV 56 (379)
Q Consensus 5 l~~~g~~~~~~g~y~~Al~~y~~al~~~p~~~-~~~~~ra~~~~~lg~~~eAl 56 (379)
+...|...-.....++|..+- ..|...+... .+-.-|...+...|+|++|+
T Consensus 9 LAe~AL~~TG~HcH~EA~tIA-~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 9 LAELALAGTGHHCHQEAASIA-DWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHTTTCHHHHHHHH-HHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHccchHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 334455555566677776544 5566666543 34556778888899999886
No 390
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=20.19 E-value=1.9e+02 Score=27.67 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 016973 18 FELAYDLYSQAIEISPN--------SAELFADRAQASIKLQNFTEAVADANRAIELE 66 (379)
Q Consensus 18 y~~Al~~y~~al~~~p~--------~~~~~~~ra~~~~~lg~~~eAl~~~~~Al~l~ 66 (379)
|+.-+..++.|+..-|. ...++..+|.+|+-+++|++|+..+..++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 34455556666665443 25677888999999999999999999998754
Done!